F297533

General Info

Members Datasets Scaffolds Average Seq Length
193 100 386 332

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0239452|Ga0451577_0239452_61_1158
Length 365
Sequence MNRFPGDRTRQECIWRIPEWIRKICRQRQDLLTALLGAAVVFLLASGCGLQKPEVVIYTSVDQPFAEPVLAGFERESGIRVRAVYDVEAAKTTGLVNRLIAEKSRPQADVFWNSEVLQTIRLKQAGILQPYRSPAASQIPPAFQDADGWWTGNTARARVLIINTQRVKDPQSIQSLEDLLNPGEYRGETGIANPLFGTTATHAAVLYAVNGSRKGKAFFEQLVQNGTHMVDGNAMVRDMVASGQLAYGLTDTDDACGAYARGDPVALILPDQESQGTLIIPSTAALIAGAPHAAEGRALIDYLLSRQVEQALINTGYSHVALHAGLDQPRSCPLPGKIRALTVDYQEVYRLFETAQEDLRGVLSH

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
58 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
59 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
60 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
63 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
71 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
72 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
73 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
74 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
75 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
76 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
77 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
78 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
79 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
80 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
81 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
85 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
86 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
93 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
94 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
97 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
98 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 0
Rhizosphere 98.45
Stem 0
Stem Tuber 0
Unclassified 20.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0239452 3300042876 Bacteria 1642
2 Ga0070677_10083690 3300005333 Bacteria 1371
3 Ga0070668_100020514 3300005347 Bacteria 4988
4 Ga0070668_100054246 3300005347 Unclassified 3092
5 Ga0070669_100134097 3300005353 Bacteria 1903
6 Ga0070675_100031661 3300005354 Bacteria 4277
7 Ga0070675_100047001 3300005354 Bacteria 3536
8 Ga0070688_100009030 3300005365 Bacteria 5435
9 Ga0070700_100042994 3300005441 Bacteria 2777
10 Ga0070662_100078249 3300005457 Bacteria 2456
11 Ga0070699_100107308 3300005518 Bacteria 2450
12 Ga0070704_100415254 3300005549 Bacteria 1151
13 Ga0068859_100097246 3300005617 Bacteria 2997
14 Ga0068859_100234124 3300005617 Unclassified 1925
15 Ga0068861_100060587 3300005719 Unclassified 2901
16 Ga0068863_100002057 3300005841 Bacteria 19929
17 Ga0068858_100165921 3300005842 Bacteria 2081
18 Ga0068862_100012684 3300005844 Bacteria 6974
19 Ga0068862_100043930 3300005844 Bacteria 3811
20 Ga0081539_10000732 3300005985 Bacteria 65756
21 Ga0081539_10071557 3300005985 Bacteria 1856
22 Ga0081539_10115276 3300005985 Unclassified 1344
23 Ga0075367_10110249 3300006178 Unclassified 1689
24 Ga0075428_100031707 3300006844 Bacteria 5839
25 Ga0075428_100176465 3300006844 Bacteria 2314
26 Ga0075430_100007552 3300006846 Bacteria 9181
27 Ga0075430_100008489 3300006846 Bacteria 8679
28 Ga0075430_100250477 3300006846 Unclassified 1468
29 Ga0075431_100038658 3300006847 Unclassified 4915
30 Ga0075431_100089461 3300006847 Bacteria 3178
31 Ga0075433_10027749 3300006852 Bacteria 4806
32 Ga0075434_100060821 3300006871 Unclassified 3757
33 Ga0075434_100289769 3300006871 Unclassified 1657
34 Ga0075429_100095503 3300006880 Unclassified 2592
35 Ga0075429_100304155 3300006880 Bacteria 1396
36 Ga0097620_100097246 3300006931 Bacteria 2997
37 Ga0097620_100234122 3300006931 Unclassified 1925
38 Ga0075435_100003566 3300007076 Bacteria 10573
39 Ga0099794_10013817 3300007265 Bacteria 3523
40 Ga0111539_10189637 3300009094 Unclassified 2399
41 Ga0111539_10237517 3300009094 Bacteria 2121
42 Ga0111539_10299409 3300009094 Unclassified 1872
43 Ga0114129_10001919 3300009147 Bacteria 28380
44 Ga0114129_10003386 3300009147 Bacteria 22402
45 Ga0114129_10038563 3300009147 Bacteria 6738
46 Ga0114129_10058038 3300009147 Bacteria 5414
47 Ga0114129_10104410 3300009147 Bacteria 3916
48 Ga0105243_10222783 3300009148 Bacteria 1668
49 Ga0105249_10011931 3300009553 Bacteria 7642
50 Ga0157380_10030351 3300014326 Bacteria 4140
51 Ga0157380_10130515 3300014326 Bacteria 2143
52 Ga0207682_10053767 3300025893 Bacteria 1671
53 Ga0207659_10024933 3300025926 Bacteria 4014
54 Ga0207706_10050556 3300025933 Bacteria 3673
55 Ga0207686_10324368 3300025934 Bacteria 1152
56 Ga0207709_10150560 3300025935 Bacteria 1611
57 Ga0207712_10008937 3300025961 Bacteria 6336
58 Ga0207668_10038975 3300025972 Bacteria 3194
59 Ga0207668_10045979 3300025972 Bacteria 2980
60 Ga0207703_10112359 3300026035 Bacteria 2327
61 Ga0207708_10038694 3300026075 Bacteria 3633
62 Ga0207641_10001056 3300026088 Bacteria 27821
63 Ga0207648_10017057 3300026089 Bacteria 6619
64 Ga0207675_100087273 3300026118 Bacteria 2930
65 Ga0207428_10103060 3300027907 Bacteria 2203
66 Ga0307408_100004255 3300031548 Bacteria 9741
67 Ga0307408_100013246 3300031548 Bacteria 5473
68 Ga0307408_100019853 3300031548 Bacteria 4526
69 Ga0307408_100044061 3300031548 Bacteria 3178
70 Ga0307408_100090502 3300031548 Unclassified 2309
71 Ga0307408_100235872 3300031548 Bacteria 1501
72 Ga0307405_10046057 3300031731 Bacteria 2677
73 Ga0307405_10046934 3300031731 Bacteria 2657
74 Ga0307405_10069649 3300031731 Bacteria 2256
75 Ga0307405_10070591 3300031731 Bacteria 2244
76 Ga0307405_10116807 3300031731 Bacteria 1818
77 Ga0307413_10002590 3300031824 Bacteria 7394
78 Ga0307413_10010420 3300031824 Bacteria 4509
79 Ga0307410_10029826 3300031852 Bacteria 3478
80 Ga0307410_10049681 3300031852 Bacteria 2817
81 Ga0307406_10003440 3300031901 Bacteria 8614
82 Ga0307407_10000912 3300031903 Bacteria 9984
83 Ga0307412_10001640 3300031911 Bacteria 12348
84 Ga0307412_10011640 3300031911 Bacteria 5101
85 Ga0307412_10053381 3300031911 Unclassified 2679
86 Ga0307412_10100982 3300031911 Bacteria 2040
87 Ga0307412_10181028 3300031911 Unclassified 1585
88 Ga0307409_100029074 3300031995 Unclassified 3949
89 Ga0307409_100131144 3300031995 Bacteria 2142
90 Ga0307409_100168008 3300031995 Bacteria 1927
91 Ga0307416_100000566 3300032002 Bacteria 18917
92 Ga0307416_100040043 3300032002 Unclassified 3636
93 Ga0307416_100072086 3300032002 Bacteria 2873
94 Ga0307416_100159722 3300032002 Bacteria 2081
95 Ga0307416_100236027 3300032002 Unclassified 1767
96 Ga0307414_10016205 3300032004 Bacteria 4524
97 Ga0307411_10000552 3300032005 Bacteria 13304
98 Ga0307411_10008540 3300032005 Bacteria 5317
99 Ga0307411_10155188 3300032005 Bacteria 1707
100 Ga0307415_100000509 3300032126 Bacteria 16914
101 Ga0307415_100124206 3300032126 Unclassified 1942
102 Ga0307415_100127641 3300032126 Bacteria 1919
103 Ga0307415_100137619 3300032126 Unclassified 1860
104 Ga0307415_100156941 3300032126 Unclassified 1758
105 Ga0307415_100351274 3300032126 Unclassified 1241
106 Ga0307415_100377257 3300032126 Bacteria 1203
107 Ga0439462_0030132 3300042015 Unclassified 1435
108 Ga0450920_007240 3300042122 Bacteria 2008
109 Ga0450896_005550 3300042133 Bacteria 1720
110 Ga0439435_0012789 3300042436 Unclassified 2042
111 Ga0453684_0000292 3300044712 Bacteria 213050
112 Ga0453684_0028500 3300044712 Archaea 7963
113 Ga0453684_0193568 3300044712 Bacteria 2376
114 Ga0453684_0364367 3300044712 Bacteria 1626
115 Ga0495672_0024142 3300047320 Unclassified 3923
116 Ga0501298_002223 3300049521 Bacteria 2924
117 Ga0501033_0022741 3300049570 Bacteria 4727
118 Ga0501036_0016544 3300049572 Bacteria 6160
119 Ga0501039_0384491 3300049575 Bacteria 1102
120 Ga0501041_0010671 3300049577 Bacteria 5419
121 Ga0501041_0070390 3300049577 Bacteria 2147
122 Ga0501041_0087420 3300049577 Bacteria 1924
123 Ga0501041_0145427 3300049577 Unclassified 1479
124 Ga0501042_0068352 3300049578 Bacteria 2541
125 Ga0501042_0107953 3300049578 Unclassified 2004
126 Ga0501042_0325116 3300049578 Bacteria 1111
127 Ga0501043_0134770 3300049579 Bacteria 1935
128 Ga0501072_0002405 3300049588 Bacteria 14035
129 Ga0501072_0011377 3300049588 Bacteria 6801
130 Ga0501072_0032400 3300049588 Unclassified 4093
131 Ga0501072_0033150 3300049588 Unclassified 4047
132 Ga0501075_0003065 3300049591 Bacteria 11173
133 Ga0501075_0018838 3300049591 Bacteria 5003
134 Ga0501075_0108645 3300049591 Bacteria 2109
135 Ga0501223_010210 3300049663 Unclassified 1893
136 Ga0501247_003677 3300049677 Bacteria 1652
137 Ga0501249_021059 3300049679 Unclassified 1421
138 Ga0501252_006472 3300049682 Bacteria 1303
139 Ga0501260_001350 3300049689 Bacteria 2015
140 Ga0501229_003239 3300049706 Bacteria 1943
141 Ga0501079_0003575 3300049741 Bacteria 11433
142 Ga0501079_0125561 3300049741 Unclassified 1996
143 Ga0501081_0010904 3300049743 Bacteria 5940
144 Ga0501262_004978 3300049759 Bacteria 1558
145 Ga0501283_001285 3300049779 Bacteria 3293
146 Ga0501283_002828 3300049779 Bacteria 2271
147 Ga0501035_0024590 3300049822 Bacteria 5523
148 Ga0501045_0001699 3300049824 Bacteria 14822
149 Ga0501045_0027606 3300049824 Bacteria 4092
150 Ga0501212_003150 3300049851 Bacteria 2048
151 nmdc:mga06z11_11888_c1 3300050494 Bacteria 3768
152 nmdc:mga05p37_201795_c1 3300050507 Bacteria 2408
153 nmdc:mga05p37_309458_c1 3300050507 Unclassified 1873
154 nmdc:mga05p37_361541_c1 3300050507 Bacteria 1706
155 nmdc:mga05p37_40273_c1 3300050507 Bacteria 5737
156 nmdc:mga05p37_6152_c1 3300050507 Bacteria 14126
157 nmdc:mga05p37_9130_c1 3300050507 Bacteria 11721
158 nmdc:mga09592_17533_c1 3300050508 Bacteria 5867
159 nmdc:mga09592_25869_c1 3300050508 Bacteria 4860
160 nmdc:mga09592_28484_c1 3300050508 Bacteria 4640
161 nmdc:mga0qj67_303846_c1 3300050509 Unclassified 1292
162 nmdc:mga0qj67_380534_c1 3300050509 Unclassified 1140
163 nmdc:mga0qj67_417724_c1 3300050509 Bacteria 1081
164 nmdc:mga0qj67_6821_c1 3300050509 Bacteria 8391
165 nmdc:mga06r32_10879_c1 3300050510 Bacteria 8193
166 nmdc:mga06r32_16075_c1 3300050510 Bacteria 6813
167 nmdc:mga06r32_18546_c1 3300050510 Bacteria 6373
168 nmdc:mga06r32_42025_c1 3300050510 Bacteria 4345
169 nmdc:mga06r32_66973_c1 3300050510 Bacteria 3466
170 nmdc:mga08y16_151079_c1 3300050511 Unclassified 2414
171 nmdc:mga0n895_112151_c1 3300050512 Bacteria 2744
172 nmdc:mga0n895_145726_c1 3300050512 Bacteria 2398
173 nmdc:mga08x19_133016_c1 3300050514 Bacteria 1674
174 nmdc:mga0a205_5348_c1 3300050515 Bacteria 11572
175 Ga0500568_0005965 3300053139 Bacteria 6192
176 Ga0501084_0044774 3300054114 Bacteria 3705
177 Ga0501084_0158124 3300054114 Bacteria 1912
178 Ga0590071_000182 3300059421 Bacteria 18213
179 Ga0590071_000215 3300059421 Bacteria 16955
180 Ga0590071_002904 3300059421 Bacteria 4271
181 Ga0590071_028196 3300059421 Bacteria 1334
182 Ga0590071_032088 3300059421 Unclassified 1253
183 Ga0590075_000061 3300059424 Bacteria 27022
184 Ga0590075_000762 3300059424 Bacteria 8527
185 Ga0590075_003212 3300059424 Bacteria 3891
186 Ga0590077_000081 3300059426 Bacteria 24492
187 Ga0590077_000516 3300059426 Bacteria 10693
188 Ga0590077_002167 3300059426 Bacteria 4287
189 Ga0501082_0019380 3300060353 Bacteria 5862
190 Ga0501082_0407865 3300060353 Unclassified 1186
191 Ga0530510_0002900 3300061734 Bacteria 11758
192 Ga0530510_0004609 3300061734 Bacteria 9533
193 Ga0530510_0008940 3300061734 Bacteria 7016
194 Ga0451577_0239452
195 Ga0070677_10083690
196 Ga0070668_100020514
197 Ga0070668_100054246
198 Ga0070669_100134097
199 Ga0070675_100031661
200 Ga0070675_100047001
201 Ga0070688_100009030
202 Ga0070700_100042994
203 Ga0070662_100078249
204 Ga0070699_100107308
205 Ga0070704_100415254
206 Ga0068859_100097246
207 Ga0068859_100234124
208 Ga0068861_100060587
209 Ga0068863_100002057
210 Ga0068858_100165921
211 Ga0068862_100012684
212 Ga0068862_100043930
213 Ga0081539_10000732
214 Ga0081539_10071557
215 Ga0081539_10115276
216 Ga0075367_10110249
217 Ga0075428_100031707
218 Ga0075428_100176465
219 Ga0075430_100007552
220 Ga0075430_100008489
221 Ga0075430_100250477
222 Ga0075431_100038658
223 Ga0075431_100089461
224 Ga0075433_10027749
225 Ga0075434_100060821
226 Ga0075434_100289769
227 Ga0075429_100095503
228 Ga0075429_100304155
229 Ga0097620_100097246
230 Ga0097620_100234122
231 Ga0075435_100003566
232 Ga0099794_10013817
233 Ga0111539_10189637
234 Ga0111539_10237517
235 Ga0111539_10299409
236 Ga0114129_10001919
237 Ga0114129_10003386
238 Ga0114129_10038563
239 Ga0114129_10058038
240 Ga0114129_10104410
241 Ga0105243_10222783
242 Ga0105249_10011931
243 Ga0157380_10030351
244 Ga0157380_10130515
245 Ga0207682_10053767
246 Ga0207659_10024933
247 Ga0207706_10050556
248 Ga0207686_10324368
249 Ga0207709_10150560
250 Ga0207712_10008937
251 Ga0207668_10038975
252 Ga0207668_10045979
253 Ga0207703_10112359
254 Ga0207708_10038694
255 Ga0207641_10001056
256 Ga0207648_10017057
257 Ga0207675_100087273
258 Ga0207428_10103060
259 Ga0307408_100004255
260 Ga0307408_100013246
261 Ga0307408_100019853
262 Ga0307408_100044061
263 Ga0307408_100090502
264 Ga0307408_100235872
265 Ga0307405_10046057
266 Ga0307405_10046934
267 Ga0307405_10069649
268 Ga0307405_10070591
269 Ga0307405_10116807
270 Ga0307413_10002590
271 Ga0307413_10010420
272 Ga0307410_10029826
273 Ga0307410_10049681
274 Ga0307406_10003440
275 Ga0307407_10000912
276 Ga0307412_10001640
277 Ga0307412_10011640
278 Ga0307412_10053381
279 Ga0307412_10100982
280 Ga0307412_10181028
281 Ga0307409_100029074
282 Ga0307409_100131144
283 Ga0307409_100168008
284 Ga0307416_100000566
285 Ga0307416_100040043
286 Ga0307416_100072086
287 Ga0307416_100159722
288 Ga0307416_100236027
289 Ga0307414_10016205
290 Ga0307411_10000552
291 Ga0307411_10008540
292 Ga0307411_10155188
293 Ga0307415_100000509
294 Ga0307415_100124206
295 Ga0307415_100127641
296 Ga0307415_100137619
297 Ga0307415_100156941
298 Ga0307415_100351274
299 Ga0307415_100377257
300 Ga0439462_0030132
301 Ga0450920_007240
302 Ga0450896_005550
303 Ga0439435_0012789
304 Ga0453684_0000292
305 Ga0453684_0028500
306 Ga0453684_0193568
307 Ga0453684_0364367
308 Ga0495672_0024142
309 Ga0501298_002223
310 Ga0501033_0022741
311 Ga0501036_0016544
312 Ga0501039_0384491
313 Ga0501041_0010671
314 Ga0501041_0070390
315 Ga0501041_0087420
316 Ga0501041_0145427
317 Ga0501042_0068352
318 Ga0501042_0107953
319 Ga0501042_0325116
320 Ga0501043_0134770
321 Ga0501072_0002405
322 Ga0501072_0011377
323 Ga0501072_0032400
324 Ga0501072_0033150
325 Ga0501075_0003065
326 Ga0501075_0018838
327 Ga0501075_0108645
328 Ga0501223_010210
329 Ga0501247_003677
330 Ga0501249_021059
331 Ga0501252_006472
332 Ga0501260_001350
333 Ga0501229_003239
334 Ga0501079_0003575
335 Ga0501079_0125561
336 Ga0501081_0010904
337 Ga0501262_004978
338 Ga0501283_001285
339 Ga0501283_002828
340 Ga0501035_0024590
341 Ga0501045_0001699
342 Ga0501045_0027606
343 Ga0501212_003150
344 nmdc:mga06z11_11888_c1
345 nmdc:mga05p37_201795_c1
346 nmdc:mga05p37_309458_c1
347 nmdc:mga05p37_361541_c1
348 nmdc:mga05p37_40273_c1
349 nmdc:mga05p37_6152_c1
350 nmdc:mga05p37_9130_c1
351 nmdc:mga09592_17533_c1
352 nmdc:mga09592_25869_c1
353 nmdc:mga09592_28484_c1
354 nmdc:mga0qj67_303846_c1
355 nmdc:mga0qj67_380534_c1
356 nmdc:mga0qj67_417724_c1
357 nmdc:mga0qj67_6821_c1
358 nmdc:mga06r32_10879_c1
359 nmdc:mga06r32_16075_c1
360 nmdc:mga06r32_18546_c1
361 nmdc:mga06r32_42025_c1
362 nmdc:mga06r32_66973_c1
363 nmdc:mga08y16_151079_c1
364 nmdc:mga0n895_112151_c1
365 nmdc:mga0n895_145726_c1
366 nmdc:mga08x19_133016_c1
367 nmdc:mga0a205_5348_c1
368 Ga0500568_0005965
369 Ga0501084_0044774
370 Ga0501084_0158124
371 Ga0590071_000182
372 Ga0590071_000215
373 Ga0590071_002904
374 Ga0590071_028196
375 Ga0590071_032088
376 Ga0590075_000061
377 Ga0590075_000762
378 Ga0590075_003212
379 Ga0590077_000081
380 Ga0590077_000516
381 Ga0590077_002167
382 Ga0501082_0019380
383 Ga0501082_0407865
384 Ga0530510_0002900
385 Ga0530510_0004609
386 Ga0530510_0008940

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13343

SBP_bac_6

Bacterial extracellular solute-binding protein

106

346

0.85

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

69

328

0.83

PF13531

SBP_bac_11

Bacterial extracellular solute-binding protein

54

318

0.83

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

58

310

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w3w-assembly1.cif.gz_A x-ray structure of apo-vmfbpa, a ferric ion-binding protein from vibrio metschnikovii 0.9034 2 308
4elq-assembly2.cif.gz_B ferric binding protein with carbonate 0.9031 2 307
1xvy-assembly1.cif.gz_A crystal structure of iron-free serratia marcescens sfua 0.8942 2 302
2pt2-assembly1.cif.gz_A structure of futa1 with iron(ii) 0.8899 2 307
7w3w-assembly1.cif.gz_A x-ray structure of apo-vmfbpa, a ferric ion-binding protein from vibrio metschnikovii 0.8869 2 308
ID Description Score Start End Superfamily
1xvyA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9227 2 276 3.40.190.10
1y4tD01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9177 2 270 3.40.190.10
4elqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8969 2 276 3.40.190.10
1q35A01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8953 2 269 3.40.190.10
1xvyA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8939 2 276 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A2V8EE18-F1-model_v4 Iron ABC transporter substrate-binding protein 0.9838 66 308
AF-A0A661SG10-F1-model_v4 Iron ABC transporter substrate-binding protein 0.9793 2 306
AF-A0A2V8EE18-F1-model_v4 Iron ABC transporter substrate-binding protein 0.9759 66 308
AF-A0A537AAM3-F1-model_v4 Extracellular solute-binding protein 0.973 41 308
AF-V4LL41-F1-model_v4 Iron ABC transporter substrate-binding protein 0.9708 20 308 GO:0055085

Map