F297415

General Info

Members Datasets Scaffolds Average Seq Length
193 139 386 388

Family's Representative Sequence

Representative Sequence 3300035089|Ga0373944_0037274|Ga0373944_0037274_201_1448
Length 415
Sequence MRQGASRFHKGSRMTNAVIERLEREIAKAREVGNYKTLHDLETATQAHVRVKDIGEVLLMCSNDYQGFADHPEVVAAARAALDKFGVGPASVRFICGTLTIHEDLERKIAEFLHTEAAITYSSCWSANTGLFPVLAGSGDVVISDALNHASIIDGCRAVGKDVAREIYPHADTAELARVLDKHADRPGKIIVTDGVFSMEGDLAPLPEIVRLGRSHNAIVVVDDSHGVGVVGPTARGTVEHFGLLDRVDVHTGTLGKALGGGAGGYVAGPRVVIDSLIQRSRPHLFSNAVPPSVAAAALEAIRILEREPERAQKLRGKAELFRKALKARDIAPLEGEGAIVPVVVGESAKSKAISQDLLAGGLLATSFSFPVVPEGAARIRFQVSQSHSEADLHWAADLIARTFHKHGAKPVTHG

Samples

Sample ID Description Type Environment
1 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
70 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
91 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
131 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
139 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.96
Metatranscriptomes 0
Isolates 1.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.25
Nodule 0
Rhizoplane 4.15
Rhizosphere 83.94
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373944_0037274 3300035089 Bacteria 1489
2 Ga0070666_10032372 3300005335 Bacteria 3453
3 Ga0068868_100017288 3300005338 Bacteria 5370
4 Ga0070689_100153180 3300005340 Bacteria 1860
5 Ga0070675_100114230 3300005354 Bacteria 2288
6 Ga0070675_100115764 3300005354 Bacteria 2273
7 Ga0070674_100002605 3300005356 Bacteria 9979
8 Ga0070673_100047098 3300005364 Bacteria 3353
9 Ga0070667_100083958 3300005367 Bacteria 2729
10 Ga0070714_100122123 3300005435 Bacteria 2318
11 Ga0070714_100352719 3300005435 Bacteria 1382
12 Ga0070711_100033407 3300005439 Bacteria 3426
13 Ga0070663_100136988 3300005455 Bacteria 1865
14 Ga0070707_100072202 3300005468 Bacteria 3326
15 Ga0070698_100085070 3300005471 Bacteria 3150
16 Ga0070698_100200833 3300005471 Bacteria 1930
17 Ga0070679_100043970 3300005530 Bacteria 4448
18 Ga0070679_100211595 3300005530 Bacteria 1903
19 Ga0070686_100102451 3300005544 Bacteria 1936
20 Ga0070695_100045229 3300005545 Bacteria 2805
21 Ga0068855_100050004 3300005563 Bacteria 4928
22 Ga0068857_100122822 3300005577 Bacteria 2339
23 Ga0068864_100035734 3300005618 Bacteria 4232
24 Ga0068861_100110681 3300005719 Bacteria 2200
25 Ga0068863_100104370 3300005841 Bacteria 2696
26 Ga0068860_100133972 3300005843 Bacteria 2379
27 Ga0081455_10010695 3300005937 Bacteria 9281
28 Ga0075365_10004968 3300006038 Bacteria 7119
29 Ga0075365_10049171 3300006038 Bacteria 2778
30 Ga0075363_100000508 3300006048 Bacteria 12461
31 Ga0075364_10000065 3300006051 Bacteria 40441
32 Ga0075364_10043143 3300006051 Bacteria 2932
33 Ga0075428_100008258 3300006844 Bacteria 11544
34 Ga0075431_100311827 3300006847 Bacteria 1588
35 Ga0111539_10013411 3300009094 Bacteria 10246
36 Ga0114129_10089263 3300009147 Bacteria 4273
37 Ga0105243_10108471 3300009148 Bacteria 2317
38 Ga0105248_10026241 3300009177 Bacteria 6483
39 Ga0105248_10065593 3300009177 Bacteria 4076
40 Ga0105239_10045323 3300010375 Bacteria 4820
41 Ga0157378_10003819 3300013297 Bacteria 13324
42 Ga0213874_10000484 3300021377 Bacteria 8005
43 Ga0213875_10000001 3300021388 Bacteria 2793540
44 Ga0213871_10008389 3300021441 Bacteria 2277
45 Ga0207645_10199378 3300025907 Bacteria 1316
46 Ga0207652_10060354 3300025921 Unclassified 3272
47 Ga0207659_10126727 3300025926 Bacteria 1964
48 Ga0207669_10035240 3300025937 Bacteria 2845
49 Ga0207668_10000219 3300025972 Bacteria 38731
50 Ga0207678_10142182 3300026067 Bacteria 2048
51 Ga0207641_10110203 3300026088 Bacteria 2439
52 Ga0207676_10223829 3300026095 Bacteria 1677
53 Ga0207674_10001155 3300026116 Bacteria 34231
54 Ga0207675_100103456 3300026118 Bacteria 2683
55 Ga0207683_10081800 3300026121 Bacteria 2867
56 Ga0268264_10220679 3300028381 Bacteria 1745
57 Ga0265337_1012837 3300028556 Bacteria 2831
58 Ga0265337_1014455 3300028556 Bacteria 2617
59 Ga0265319_1002945 3300028563 Bacteria 9062
60 Ga0265318_10002950 3300028577 Bacteria 8818
61 Ga0265323_10009317 3300028653 Bacteria 4017
62 Ga0265322_10001226 3300028654 Bacteria 8721
63 Ga0265338_10000634 3300028800 Bacteria 60990
64 Ga0265338_10001036 3300028800 Bacteria 46506
65 Ga0265338_10009865 3300028800 Bacteria 11306
66 Ga0265338_10016515 3300028800 Bacteria 8024
67 Ga0265338_10023378 3300028800 Bacteria 6357
68 Ga0265338_10038159 3300028800 Bacteria 4556
69 Ga0265338_10051056 3300028800 Bacteria 3729
70 Ga0265330_10008298 3300031235 Bacteria 5004
71 Ga0265332_10011693 3300031238 Bacteria 3900
72 Ga0265332_10012816 3300031238 Bacteria 3719
73 Ga0265328_10013357 3300031239 Bacteria 3251
74 Ga0265320_10020089 3300031240 Bacteria 3630
75 Ga0265325_10000453 3300031241 Bacteria 29634
76 Ga0265325_10017481 3300031241 Bacteria 3983
77 Ga0265325_10018629 3300031241 Bacteria 3850
78 Ga0265325_10027184 3300031241 Bacteria 3094
79 Ga0265329_10005040 3300031242 Bacteria 5391
80 Ga0265329_10019779 3300031242 Bacteria 2281
81 Ga0265340_10005710 3300031247 Bacteria 6872
82 Ga0265339_10004237 3300031249 Bacteria 9829
83 Ga0265339_10005781 3300031249 Bacteria 8211
84 Ga0265339_10011704 3300031249 Bacteria 5386
85 Ga0265339_10016413 3300031249 Bacteria 4415
86 Ga0265327_10005960 3300031251 Bacteria 9933
87 Ga0265327_10012057 3300031251 Bacteria 5872
88 Ga0265327_10018853 3300031251 Bacteria 4262
89 Ga0265327_10037356 3300031251 Bacteria 2660
90 Ga0265327_10039468 3300031251 Bacteria 2564
91 Ga0265316_10002828 3300031344 Bacteria 17759
92 Ga0265316_10008337 3300031344 Bacteria 9621
93 Ga0265316_10014982 3300031344 Bacteria 6799
94 Ga0265316_10043079 3300031344 Bacteria 3602
95 Ga0265313_10000970 3300031595 Bacteria 28370
96 Ga0265313_10006904 3300031595 Bacteria 7892
97 Ga0265313_10007491 3300031595 Bacteria 7441
98 Ga0265313_10012974 3300031595 Bacteria 5042
99 Ga0265313_10065283 3300031595 Bacteria 1690
100 Ga0265314_10003773 3300031711 Bacteria 14480
101 Ga0265314_10005163 3300031711 Bacteria 11861
102 Ga0265314_10051856 3300031711 Bacteria 2855
103 Ga0265342_10003544 3300031712 Bacteria 12775
104 Ga0265342_10034500 3300031712 Bacteria 3103
105 Ga0316576_10147164 3300031727 Bacteria 1775
106 Ga0373960_0003958 3300035121 Bacteria 3378
107 Ga0373931_0007995 3300035691 Bacteria 5003
108 Ga0373935_0009840 3300035692 Bacteria 5725
109 Ga0373947_0040133 3300035725 Bacteria 2787
110 Ga0373925_0003164 3300037068 Bacteria 12896
111 Ga0395898_0134986 3300037466 Bacteria 2363
112 Ga0395905_0304705 3300037471 Bacteria 1481
113 Ga0436364_0273345 3300037853 Bacteria 2794207
114 Ga0395901_0343317 3300038443 Bacteria 1542
115 Ga0436365_0308012 3300039437 Bacteria 18581
116 Ga0436365_0917479 3300039437 Bacteria 1981
117 Ga0436360_0041256 3300039438 Bacteria 2453
118 Ga0436360_0177845 3300039438 Bacteria 13570
119 Ga0436361_0035279 3300039447 Bacteria 1205
120 Ga0436361_0668931 3300039447 Bacteria 17684
121 Ga0436361_0827759 3300039447 Bacteria 2000
122 Ga0436361_1172201 3300039447 Bacteria 2288
123 Ga0436363_0648609 3300039450 Bacteria 12059
124 Ga0436362_0957871 3300039453 Bacteria 7218
125 Ga0436362_1070825 3300039453 Bacteria 6549
126 Ga0451577_0000004 3300042876 Bacteria 816743
127 Ga0453684_0000025 3300044712 Bacteria 818638
128 Ga0495651_0048305 3300046462 Bacteria 3287
129 Ga0495608_0011799 3300046511 Bacteria 6077
130 Ga0495667_0048081 3300046559 Bacteria 2817
131 Ga0495667_0058873 3300046559 Bacteria 2522
132 Ga0495635_0077207 3300046663 Bacteria 2282
133 Ga0495588_0083256 3300046674 Bacteria 1671
134 Ga0495657_0012206 3300046675 Bacteria 6390
135 Ga0495658_0035986 3300046683 Bacteria 2728
136 Ga0495613_0230636 3300046689 Bacteria 1297
137 Ga0495600_0111997 3300046809 Bacteria 1777
138 Ga0495600_0115688 3300046809 Bacteria 1746
139 Ga0495674_0084112 3300047319 Bacteria 2727
140 Ga0495672_0132597 3300047320 Bacteria 1309
141 Ga0495680_0013554 3300047322 Bacteria 7106
142 Ga0495675_0054635 3300047444 Bacteria 2534
143 Ga0496100_0095461 3300048903 Bacteria 2038
144 Ga0496101_0004950 3300048904 Bacteria 8460
145 Ga0496102_0128602 3300048905 Bacteria 2369
146 Ga0496105_0003533 3300048908 Bacteria 11591
147 Ga0496109_0301304 3300048912 Bacteria 1511
148 Ga0496112_0164022 3300048915 Bacteria 2188
149 Ga0496113_0207212 3300048916 Bacteria 1560
150 Ga0496114_0006516 3300048917 Bacteria 9201
151 Ga0496121_0055888 3300048924 Bacteria 3284
152 Ga0496126_0252894 3300048929 Bacteria 1468
153 Ga0501031_0042798 3300049568 Bacteria 2956
154 Ga0501034_0004154 3300049571 Bacteria 16214
155 Ga0501034_0044709 3300049571 Bacteria 4477
156 Ga0501036_0035883 3300049572 Bacteria 4195
157 Ga0501040_0021230 3300049576 Bacteria 4334
158 Ga0501042_0062206 3300049578 Bacteria 2667
159 Ga0501043_0125009 3300049579 Bacteria 2017
160 Ga0501046_0121270 3300049580 Bacteria 1989
161 Ga0501047_0094897 3300049581 Bacteria 2862
162 Ga0501067_0058266 3300049583 Bacteria 2139
163 Ga0501068_0013211 3300049584 Bacteria 4696
164 Ga0501070_0006835 3300049586 Bacteria 9707
165 Ga0501070_0029596 3300049586 Bacteria 4590
166 Ga0501071_0021077 3300049587 Bacteria 4537
167 Ga0501072_0017078 3300049588 Bacteria 5576
168 Ga0501073_0089797 3300049589 Bacteria 2136
169 Ga0501074_0021478 3300049590 Bacteria 4686
170 Ga0501074_0143829 3300049590 Bacteria 1705
171 Ga0501075_0056427 3300049591 Bacteria 2956
172 Ga0501079_0040765 3300049741 Bacteria 3583
173 Ga0501080_0002096 3300049742 Bacteria 17315
174 Ga0501080_0028629 3300049742 Bacteria 5186
175 Ga0501080_0087048 3300049742 Bacteria 2902
176 Ga0501083_0016504 3300049744 Bacteria 5167
177 Ga0501044_0052783 3300049823 Bacteria 4186
178 Ga0501045_0072003 3300049824 Bacteria 2544
179 Ga0501045_0085602 3300049824 Bacteria 2327
180 nmdc:mga03683_28566_c1 3300050489 Bacteria 2218
181 nmdc:mga03n38_71603_c1 3300050490 Bacteria 1605
182 nmdc:mga00v17_34640_c1 3300050491 Bacteria 3000
183 nmdc:mga00v17_371_c1 3300050491 Bacteria 25464
184 nmdc:mga00v17_51760_c1 3300050491 Bacteria 2497
185 nmdc:mga0yw44_105284_c1 3300050492 Bacteria 1802
186 nmdc:mga0yw44_3236_c1 3300050492 Bacteria 7178
187 nmdc:mga0yw44_80719_c1 3300050492 Bacteria 2038
188 nmdc:mga09592_92584_c1 3300050508 Bacteria 2584
189 Ga0495595_0003285 3300053084 Bacteria 6423
190 Ga0500643_004795 3300053087 Bacteria 5981
191 Ga0501082_0328857 3300060353 Bacteria 1332
192 2902794669 2902792274 Bacteria 7270173
193 2939586829 2939582691 Bacteria 7088898
194 Ga0373944_0037274
195 Ga0070666_10032372
196 Ga0068868_100017288
197 Ga0070689_100153180
198 Ga0070675_100114230
199 Ga0070675_100115764
200 Ga0070674_100002605
201 Ga0070673_100047098
202 Ga0070667_100083958
203 Ga0070714_100122123
204 Ga0070714_100352719
205 Ga0070711_100033407
206 Ga0070663_100136988
207 Ga0070707_100072202
208 Ga0070698_100085070
209 Ga0070698_100200833
210 Ga0070679_100043970
211 Ga0070679_100211595
212 Ga0070686_100102451
213 Ga0070695_100045229
214 Ga0068855_100050004
215 Ga0068857_100122822
216 Ga0068864_100035734
217 Ga0068861_100110681
218 Ga0068863_100104370
219 Ga0068860_100133972
220 Ga0081455_10010695
221 Ga0075365_10004968
222 Ga0075365_10049171
223 Ga0075363_100000508
224 Ga0075364_10000065
225 Ga0075364_10043143
226 Ga0075428_100008258
227 Ga0075431_100311827
228 Ga0111539_10013411
229 Ga0114129_10089263
230 Ga0105243_10108471
231 Ga0105248_10026241
232 Ga0105248_10065593
233 Ga0105239_10045323
234 Ga0157378_10003819
235 Ga0213874_10000484
236 Ga0213875_10000001
237 Ga0213871_10008389
238 Ga0207645_10199378
239 Ga0207652_10060354
240 Ga0207659_10126727
241 Ga0207669_10035240
242 Ga0207668_10000219
243 Ga0207678_10142182
244 Ga0207641_10110203
245 Ga0207676_10223829
246 Ga0207674_10001155
247 Ga0207675_100103456
248 Ga0207683_10081800
249 Ga0268264_10220679
250 Ga0265337_1012837
251 Ga0265337_1014455
252 Ga0265319_1002945
253 Ga0265318_10002950
254 Ga0265323_10009317
255 Ga0265322_10001226
256 Ga0265338_10000634
257 Ga0265338_10001036
258 Ga0265338_10009865
259 Ga0265338_10016515
260 Ga0265338_10023378
261 Ga0265338_10038159
262 Ga0265338_10051056
263 Ga0265330_10008298
264 Ga0265332_10011693
265 Ga0265332_10012816
266 Ga0265328_10013357
267 Ga0265320_10020089
268 Ga0265325_10000453
269 Ga0265325_10017481
270 Ga0265325_10018629
271 Ga0265325_10027184
272 Ga0265329_10005040
273 Ga0265329_10019779
274 Ga0265340_10005710
275 Ga0265339_10004237
276 Ga0265339_10005781
277 Ga0265339_10011704
278 Ga0265339_10016413
279 Ga0265327_10005960
280 Ga0265327_10012057
281 Ga0265327_10018853
282 Ga0265327_10037356
283 Ga0265327_10039468
284 Ga0265316_10002828
285 Ga0265316_10008337
286 Ga0265316_10014982
287 Ga0265316_10043079
288 Ga0265313_10000970
289 Ga0265313_10006904
290 Ga0265313_10007491
291 Ga0265313_10012974
292 Ga0265313_10065283
293 Ga0265314_10003773
294 Ga0265314_10005163
295 Ga0265314_10051856
296 Ga0265342_10003544
297 Ga0265342_10034500
298 Ga0316576_10147164
299 Ga0373960_0003958
300 Ga0373931_0007995
301 Ga0373935_0009840
302 Ga0373947_0040133
303 Ga0373925_0003164
304 Ga0395898_0134986
305 Ga0395905_0304705
306 Ga0436364_0273345
307 Ga0395901_0343317
308 Ga0436365_0308012
309 Ga0436365_0917479
310 Ga0436360_0041256
311 Ga0436360_0177845
312 Ga0436361_0035279
313 Ga0436361_0668931
314 Ga0436361_0827759
315 Ga0436361_1172201
316 Ga0436363_0648609
317 Ga0436362_0957871
318 Ga0436362_1070825
319 Ga0451577_0000004
320 Ga0453684_0000025
321 Ga0495651_0048305
322 Ga0495608_0011799
323 Ga0495667_0048081
324 Ga0495667_0058873
325 Ga0495635_0077207
326 Ga0495588_0083256
327 Ga0495657_0012206
328 Ga0495658_0035986
329 Ga0495613_0230636
330 Ga0495600_0111997
331 Ga0495600_0115688
332 Ga0495674_0084112
333 Ga0495672_0132597
334 Ga0495680_0013554
335 Ga0495675_0054635
336 Ga0496100_0095461
337 Ga0496101_0004950
338 Ga0496102_0128602
339 Ga0496105_0003533
340 Ga0496109_0301304
341 Ga0496112_0164022
342 Ga0496113_0207212
343 Ga0496114_0006516
344 Ga0496121_0055888
345 Ga0496126_0252894
346 Ga0501031_0042798
347 Ga0501034_0004154
348 Ga0501034_0044709
349 Ga0501036_0035883
350 Ga0501040_0021230
351 Ga0501042_0062206
352 Ga0501043_0125009
353 Ga0501046_0121270
354 Ga0501047_0094897
355 Ga0501067_0058266
356 Ga0501068_0013211
357 Ga0501070_0006835
358 Ga0501070_0029596
359 Ga0501071_0021077
360 Ga0501072_0017078
361 Ga0501073_0089797
362 Ga0501074_0021478
363 Ga0501074_0143829
364 Ga0501075_0056427
365 Ga0501079_0040765
366 Ga0501080_0002096
367 Ga0501080_0028629
368 Ga0501080_0087048
369 Ga0501083_0016504
370 Ga0501044_0052783
371 Ga0501045_0072003
372 Ga0501045_0085602
373 nmdc:mga03683_28566_c1
374 nmdc:mga03n38_71603_c1
375 nmdc:mga00v17_34640_c1
376 nmdc:mga00v17_371_c1
377 nmdc:mga00v17_51760_c1
378 nmdc:mga0yw44_105284_c1
379 nmdc:mga0yw44_3236_c1
380 nmdc:mga0yw44_80719_c1
381 nmdc:mga09592_92584_c1
382 Ga0495595_0003285
383 Ga0500643_004795
384 Ga0501082_0328857
385 2902794669
386 2939586829

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

55

400

0.92

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

97

269

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pob-assembly1.cif.gz_D an irreversible, promiscuous and highly thermostable claisen-condensation biocatalyst drives the synthesis of substituted pyrroles 0.944 1 395
7bxp-assembly1.cif.gz_B 2-amino-3-ketobutyrate coa ligase from cupriavidus necator 0.942 1 394
3tqx-assembly1.cif.gz_B structure of the 2-amino-3-ketobutyrate coenzyme a ligase (kbl) from coxiella burnetii 0.9411 1 394
8guh-assembly1.cif.gz_A serine palmitoyltransferase from sphingobacterium multivorum complexed with tris 0.9398 3 392
7v5i-assembly1.cif.gz_B structural insights into the substrate selectivity of acyl-coa transferase 0.9395 4 394
ID Description Score Start End Superfamily
af_Q2G0M8_295_394_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9912 302 394 3.90.1150.10
af_I1JW06_395_456_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.983 328 387 3.90.1150.10
1fc4B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9819 302 387 3.90.1150.10
af_O94069_405_493_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9745 305 384 3.90.1150.10
af_Q4CT40_69_162_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9736 302 389 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7V5TNN2-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.998 313 394 GO:0008483
GO:0009058
GO:0030170
AF-A0A7Y6UBQ4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9882 305 392 GO:0008483
GO:0009058
GO:0030170
AF-A0A7C5HWR8-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9869 309 394 GO:0005829
GO:0008483
GO:0008890
GO:0009058
GO:0030170
AF-A0A381TWV1-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9868 308 394 GO:0009058
GO:0030170
AF-A0A531LQY2-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9866 302 394 GO:0008483
GO:0009058
GO:0030170

Map