F297381

General Info

Members Datasets Scaffolds Average Seq Length
193 150 193 469

Family's Representative Sequence

Representative Sequence 3300031901|Ga0307406_10016931|Ga0307406_100169312
Length 522
Sequence MTATKNATNPGPVTDRAARPHPVRIHDSMRREKVPFEPLVPGKVGMYVCGPTPYAAAHIGHAYAAISFDTIRRALRFLGYEVRYVRNVTDVEDKIIKRSAETGEEPMALAARFTADYNRDMARFSVEPPDVEPRVSTHIAEIIAVIEKLVGNGCAYPVDGDVYFSVEAFPTYGKLSGMSIDQLRAGARVEVDERKRAPADFALWKGAKPGEPSWPSPWGWHIECSAMVVTHLGETFDLHGGGKDLIFPHHENEIAQSQGAYGAHTFARYWLHNGFVNFGGEKMSKSLGNVFGCDQIADAVGAEPLRYFFVKQHYRTGLDFEVDEQREPDGRVTGVRFRSLEAADRELEYFYKALDAIDRAVTQAGDGGTGPALPEAERLIGVATEALADDFNTPIVIAAMYEAATLANRLVTEGKGPDGKPVEKQLRRRSIARLGRDLRDVGAALGILLDTPGRYLRARRERLVGWRGVDTARVEELLTERAAARAAKDFARGDAIRGELAAMGVELHDTPQGTDWSVKDGG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
50 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
70 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
81 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
83 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
94 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
98 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
139 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
140 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
141 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
144 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
145 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
146 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
147 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.7
Nodule 0
Rhizoplane 6.74
Rhizosphere 78.24
Stem 0
Stem Tuber 0
Unclassified 9.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10011649 3300005327 Bacteria 7052
2 Ga0070683_100000813 3300005329 Bacteria 23132
3 Ga0070690_100004384 3300005330 Bacteria 7830
4 Ga0070690_100129374 3300005330 Bacteria 1703
5 Ga0068869_100061571 3300005334 Bacteria 2753
6 Ga0070680_100005840 3300005336 Bacteria 9339
7 Ga0070680_100160613 3300005336 Bacteria 1888
8 Ga0070689_100083494 3300005340 Bacteria 2510
9 Ga0070687_100001293 3300005343 Bacteria 8731
10 Ga0070675_100066409 3300005354 Bacteria 2984
11 Ga0070667_100022990 3300005367 Bacteria 5169
12 Ga0070667_100081978 3300005367 Bacteria 2761
13 Ga0070709_10017256 3300005434 Bacteria 4137
14 Ga0070709_10050688 3300005434 Bacteria 2602
15 Ga0070711_100130097 3300005439 Bacteria 1874
16 Ga0070705_100002082 3300005440 Bacteria 10205
17 Ga0070694_100009381 3300005444 Bacteria 6008
18 Ga0070694_100073092 3300005444 Bacteria 2367
19 Ga0070681_10018598 3300005458 Bacteria 6948
20 Ga0070706_100018272 3300005467 Bacteria 6471
21 Ga0070679_100182315 3300005530 Bacteria 2072
22 Ga0070684_100008996 3300005535 Bacteria 7846
23 Ga0068853_100055217 3300005539 Bacteria 3423
24 Ga0070686_100013144 3300005544 Bacteria 4729
25 Ga0070686_100172333 3300005544 Bacteria 1531
26 Ga0070695_100003590 3300005545 Bacteria 9057
27 Ga0070665_100009530 3300005548 Bacteria 9822
28 Ga0070704_100079627 3300005549 Bacteria 2407
29 Ga0068855_100002013 3300005563 Bacteria 25206
30 Ga0070664_100073335 3300005564 Bacteria 2937
31 Ga0068859_100153240 3300005617 Bacteria 2381
32 Ga0068863_100172825 3300005841 Bacteria 2073
33 Ga0081455_10000656 3300005937 Bacteria 44828
34 Ga0070717_10010466 3300006028 Bacteria 7006
35 Ga0070717_10017243 3300006028 Bacteria 5614
36 Ga0068871_100247635 3300006358 Bacteria 1551
37 Ga0075428_100000041 3300006844 Bacteria 102565
38 Ga0075428_100155897 3300006844 Bacteria 2481
39 Ga0075430_100002410 3300006846 Bacteria 15562
40 Ga0075431_100009123 3300006847 Bacteria 9946
41 Ga0075429_100000093 3300006880 Bacteria 48080
42 Ga0097620_100153243 3300006931 Bacteria 2381
43 Ga0075435_100129997 3300007076 Bacteria 2107
44 Ga0105250_10000024 3300009092 Bacteria 218115
45 Ga0105240_10000238 3300009093 Bacteria 109522
46 Ga0105240_10221055 3300009093 Bacteria 2207
47 Ga0111539_10026331 3300009094 Bacteria 7111
48 Ga0111539_10345402 3300009094 Bacteria 1732
49 Ga0105245_10137165 3300009098 Bacteria 2300
50 Ga0114129_10108444 3300009147 Bacteria 3833
51 Ga0105243_10042024 3300009148 Bacteria 3577
52 Ga0105237_10059913 3300009545 Bacteria 3808
53 Ga0105238_10242957 3300009551 Bacteria 1778
54 Ga0105249_10020206 3300009553 Bacteria 5952
55 Ga0105249_10101868 3300009553 Bacteria 2702
56 Ga0157369_10238976 3300013105 Bacteria 1897
57 Ga0157378_10003065 3300013297 Bacteria 14858
58 Ga0157375_10247267 3300013308 Bacteria 1944
59 Ga0157379_10000153 3300014968 Bacteria 51100
60 Ga0213874_10018015 3300021377 Bacteria 1903
61 Ga0207696_1000383 3300025711 Bacteria 42719
62 Ga0207684_10007164 3300025910 Bacteria 10079
63 Ga0207707_10006234 3300025912 Bacteria 10417
64 Ga0207695_10000668 3300025913 Bacteria 67591
65 Ga0207695_10111524 3300025913 Bacteria 2714
66 Ga0207695_10203732 3300025913 Bacteria 1892
67 Ga0207662_10004123 3300025918 Bacteria 7598
68 Ga0207687_10165704 3300025927 Bacteria 1700
69 Ga0207670_10008453 3300025936 Bacteria 5817
70 Ga0207670_10058212 3300025936 Bacteria 2624
71 Ga0207670_10133056 3300025936 Bacteria 1825
72 Ga0207704_10088987 3300025938 Bacteria 2022
73 Ga0207665_10021520 3300025939 Bacteria 4241
74 Ga0207689_10148494 3300025942 Bacteria 1932
75 Ga0207661_10029328 3300025944 Bacteria 4225
76 Ga0207661_10260041 3300025944 Bacteria 1546
77 Ga0207667_10009039 3300025949 Bacteria 11783
78 Ga0207712_10021691 3300025961 Bacteria 4219
79 Ga0207641_10077863 3300026088 Bacteria 2870
80 Ga0207648_10198003 3300026089 Bacteria 1781
81 Ga0207675_100283664 3300026118 Bacteria 1610
82 Ga0207683_10016052 3300026121 Bacteria 6373
83 Ga0268266_10033192 3300028379 Bacteria 4389
84 Ga0268265_10027888 3300028380 Bacteria 4037
85 Ga0307517_10014125 3300028786 Bacteria 10766
86 Ga0265332_10016960 3300031238 Bacteria 3213
87 Ga0307509_10000060 3300031507 Bacteria 154618
88 Ga0307509_10000230 3300031507 Bacteria 90240
89 Ga0307509_10067099 3300031507 Bacteria 3760
90 Ga0307508_10020317 3300031616 Bacteria 6031
91 Ga0316575_10027938 3300031665 Bacteria 2196
92 Ga0316576_10045865 3300031727 Bacteria 3162
93 Ga0307516_10132081 3300031730 Bacteria 2275
94 Ga0316577_10102539 3300031733 Bacteria 1604
95 Ga0307406_10016931 3300031901 Bacteria 4241
96 Ga0307409_100008877 3300031995 Bacteria 6135
97 Ga0307510_10000005 3300033180 Bacteria 633068
98 Ga0307510_10012406 3300033180 Bacteria 10104
99 Ga0373949_0001097 3300035090 Bacteria 8221
100 Ga0373936_0000015 3300035113 Bacteria 200263
101 Ga0373961_0000094 3300035241 Bacteria 48556
102 Ga0316574_0003523 3300035398 Bacteria 8080
103 Ga0373927_0055269 3300035695 Bacteria 2567
104 Ga0316584_0031985 3300036712 Bacteria 3892
105 Ga0395899_0017113 3300037312 Bacteria 5523
106 Ga0395900_0011626 3300037418 Bacteria 9007
107 Ga0395898_0012961 3300037466 Bacteria 8598
108 Ga0395898_0016243 3300037466 Bacteria 7619
109 Ga0395898_0142680 3300037466 Bacteria 2293
110 Ga0436365_1768796 3300039437 Bacteria 4430
111 Ga0436360_0516615 3300039438 Bacteria 2714
112 Ga0436360_0597934 3300039438 Bacteria 6663
113 Ga0436363_0412791 3300039450 Bacteria 4892
114 Ga0451577_0000006 3300042876 Bacteria 709265
115 Ga0453683_0000086 3300044673 Bacteria 139689
116 Ga0453683_0000088 3300044673 Bacteria 138620
117 Ga0453683_0006817 3300044673 Bacteria 7799
118 Ga0453684_0000037 3300044712 Bacteria 709327
119 Ga0453684_0006653 3300044712 Bacteria 21828
120 Ga0453684_0101739 3300044712 Bacteria 3515
121 Ga0451576_0036104 3300045051 Bacteria 5242
122 Ga0495606_0152247 3300046507 Bacteria 1356
123 Ga0495587_0044025 3300046536 Bacteria 2656
124 Ga0495598_0016930 3300046537 Bacteria 1870
125 Ga0495658_0026881 3300046683 Bacteria 3090
126 Ga0495658_0037883 3300046683 Bacteria 2668
127 Ga0495686_0073819 3300047472 Bacteria 2094
128 Ga0496100_0003559 3300048903 Bacteria 8141
129 Ga0496101_0038097 3300048904 Bacteria 3413
130 Ga0496102_0010960 3300048905 Bacteria 7810
131 Ga0496102_0015776 3300048905 Bacteria 6585
132 Ga0496103_0014578 3300048906 Bacteria 4669
133 Ga0496106_0016110 3300048909 Bacteria 5527
134 Ga0496106_0084801 3300048909 Bacteria 2438
135 Ga0496107_0004993 3300048910 Bacteria 9033
136 Ga0496108_0183318 3300048911 Bacteria 1813
137 Ga0496109_0104121 3300048912 Bacteria 2635
138 Ga0496112_0024559 3300048915 Bacteria 5774
139 Ga0496114_0013587 3300048917 Bacteria 6531
140 Ga0496114_0064095 3300048917 Bacteria 3077
141 Ga0496116_0058656 3300048919 Bacteria 2508
142 Ga0496117_0000012 3300048920 Bacteria 608530
143 Ga0496118_0000003 3300048921 Bacteria 773148
144 Ga0496119_0002694 3300048922 Bacteria 19179
145 Ga0496120_0000796 3300048923 Bacteria 45524
146 Ga0496120_0038876 3300048923 Bacteria 2811
147 Ga0496126_0043111 3300048929 Bacteria 4164
148 Ga0501036_0010391 3300049572 Bacteria 7686
149 Ga0501038_0054353 3300049574 Bacteria 3444
150 Ga0501040_0009018 3300049576 Bacteria 6488
151 Ga0501040_0026514 3300049576 Bacteria 3898
152 Ga0501042_0021134 3300049578 Bacteria 4532
153 Ga0501042_0055984 3300049578 Bacteria 2814
154 Ga0501046_0068123 3300049580 Bacteria 2770
155 Ga0501048_0049072 3300049582 Bacteria 3009
156 Ga0501068_0052858 3300049584 Bacteria 2458
157 Ga0501070_0024883 3300049586 Bacteria 5020
158 Ga0501070_0059046 3300049586 Bacteria 3179
159 Ga0501071_0007484 3300049587 Bacteria 7176
160 Ga0501072_0028001 3300049588 Bacteria 4398
161 Ga0501075_0027216 3300049591 Bacteria 4213
162 Ga0501077_0005006 3300049593 Bacteria 8035
163 Ga0501077_0046206 3300049593 Bacteria 2767
164 Ga0501079_0041141 3300049741 Bacteria 3566
165 Ga0501079_0121918 3300049741 Bacteria 2027
166 Ga0501080_0067115 3300049742 Bacteria 3336
167 Ga0501081_0007176 3300049743 Bacteria 7247
168 Ga0501081_0010710 3300049743 Bacteria 5988
169 Ga0501081_0025551 3300049743 Bacteria 3973
170 Ga0501083_0059304 3300049744 Bacteria 2560
171 Ga0501083_0130491 3300049744 Bacteria 1647
172 Ga0501045_0002262 3300049824 Bacteria 13068
173 Ga0501045_0047306 3300049824 Bacteria 3133
174 Ga0501045_0080674 3300049824 Bacteria 2399
175 nmdc:mga09592_139_c1 3300050508 Bacteria 48114
176 nmdc:mga0qj67_1378_c1 3300050509 Bacteria 17020
177 nmdc:mga06r32_1641_c1 3300050510 Bacteria 20195
178 nmdc:mga08y16_40701_c1 3300050511 Bacteria 4869
179 Ga0500566_0010951 3300053094 Bacteria 5346
180 Ga0500566_0025822 3300053094 Bacteria 3441
181 Ga0500640_000763 3300053095 Bacteria 8710
182 Ga0500554_000014 3300053102 Bacteria 34792
183 Ga0500556_0000629 3300053104 Bacteria 22280
184 Ga0500595_000103 3300053119 Bacteria 57825
185 Ga0500614_002943 3300053123 Bacteria 3730
186 Ga0500559_0002617 3300053136 Bacteria 9188
187 Ga0500585_005363 3300053144 Bacteria 3282
188 Ga0500588_0003284 3300053146 Bacteria 3395
189 Ga0500636_0043243 3300053177 Bacteria 2660
190 Ga0501084_0012224 3300054114 Bacteria 7106
191 Ga0501082_0007905 3300060353 Bacteria 9184
192 Ga0501082_0020591 3300060353 Bacteria 5686
193 Ga0530510_0023503 3300061734 Bacteria 4393

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025944 Ga0207661_10260041 Ga0207661_102600411 419
2 3300046507 Ga0495606_0152247 Ga0495606_0152247_26_1309 424
3 3300048915 Ga0496112_0024559 Ga0496112_0024559_3549_4844 429
4 3300048917 Ga0496114_0064095 Ga0496114_0064095_1631_2926 429
5 3300046536 Ga0495587_0044025 Ga0495587_0044025_586_1884 430
6 3300009098 Ga0105245_10137165 Ga0105245_101371653 431
7 3300009148 Ga0105243_10042024 Ga0105243_100420243 431
8 3300013308 Ga0157375_10247267 Ga0157375_102472672 431
9 3300025927 Ga0207687_10165704 Ga0207687_101657042 431
10 3300048903 Ga0496100_0003559 Ga0496100_0003559_5511_6812 431
11 3300048904 Ga0496101_0038097 Ga0496101_0038097_951_2252 431
12 3300048905 Ga0496102_0010960 Ga0496102_0010960_3310_4611 431
13 3300048906 Ga0496103_0014578 Ga0496103_0014578_3067_4368 431
14 3300048909 Ga0496106_0016110 Ga0496106_0016110_3737_5038 431
15 3300048910 Ga0496107_0004993 Ga0496107_0004993_3497_4798 431
16 3300048911 Ga0496108_0183318 Ga0496108_0183318_286_1587 431
17 3300048912 Ga0496109_0104121 Ga0496109_0104121_308_1609 431
18 3300048917 Ga0496114_0013587 Ga0496114_0013587_3497_4798 431
19 3300005329 Ga0070683_100000813 Ga0070683_10000081314 432
20 3300005535 Ga0070684_100008996 Ga0070684_10000899611 432
21 3300005564 Ga0070664_100073335 Ga0070664_1000733352 432
22 3300021377 Ga0213874_10018015 Ga0213874_100180152 432
23 3300025938 Ga0207704_10088987 Ga0207704_100889872 432
24 3300025944 Ga0207661_10029328 Ga0207661_100293282 432
25 3300050511 nmdc:mga08y16_40701_c1 nmdc:mga08y16_40701_c1_1886_3193 432
26 3300009553 Ga0105249_10020206 Ga0105249_100202062 434
27 3300039438 Ga0436360_0597934 Ga0436360_0597934_5256_6650 435
28 3300039450 Ga0436363_0412791 Ga0436363_0412791_3404_4843 436
29 3300046537 Ga0495598_0016930 Ga0495598_0016930_72_1436 436
30 3300005458 Ga0070681_10018598 Ga0070681_100185981 437
31 3300025912 Ga0207707_10006234 Ga0207707_100062347 437
32 3300007076 Ga0075435_100129997 Ga0075435_1001299972 439
33 3300031507 Ga0307509_10000230 Ga0307509_1000023032 439
34 3300049591 Ga0501075_0027216 Ga0501075_0027216_2767_4179 441
35 3300049593 Ga0501077_0046206 Ga0501077_0046206_112_1524 441
36 3300049743 Ga0501081_0007176 Ga0501081_0007176_2455_3867 441
37 3300049824 Ga0501045_0080674 Ga0501045_0080674_580_1992 441
38 3300005336 Ga0070680_100160613 Ga0070680_1001606131 442
39 3300005530 Ga0070679_100182315 Ga0070679_1001823152 442
40 3300025913 Ga0207695_10203732 Ga0207695_102037322 442
41 3300048909 Ga0496106_0084801 Ga0496106_0084801_24_1361 442
42 3300005367 Ga0070667_100022990 Ga0070667_1000229902 443
43 3300039438 Ga0436360_0516615 Ga0436360_0516615_1089_2510 443
44 3300005439 Ga0070711_100130097 Ga0070711_1001300972 445
45 3300025939 Ga0207665_10021520 Ga0207665_100215204 445
46 3300031665 Ga0316575_10027938 Ga0316575_100279382 446
47 3300046683 Ga0495658_0037883 Ga0495658_0037883_1073_2488 447
48 3300005434 Ga0070709_10017256 Ga0070709_100172561 450
49 3300005434 Ga0070709_10050688 Ga0070709_100506882 450
50 3300005330 Ga0070690_100129374 Ga0070690_1001293742 451
51 3300005334 Ga0068869_100061571 Ga0068869_1000615712 451
52 3300005440 Ga0070705_100002082 Ga0070705_1000020823 451
53 3300005444 Ga0070694_100073092 Ga0070694_1000730923 451
54 3300005544 Ga0070686_100172333 Ga0070686_1001723331 451
55 3300005549 Ga0070704_100079627 Ga0070704_1000796273 451
56 3300006358 Ga0068871_100247635 Ga0068871_1002476351 451
57 3300013297 Ga0157378_10003065 Ga0157378_1000306514 451
58 3300025936 Ga0207670_10133056 Ga0207670_101330562 451
59 3300025942 Ga0207689_10148494 Ga0207689_101484942 451
60 3300026089 Ga0207648_10198003 Ga0207648_101980032 451
61 3300026118 Ga0207675_100283664 Ga0207675_1002836642 451
62 3300035695 Ga0373927_0055269 Ga0373927_0055269_1045_2409 451
63 3300037466 Ga0395898_0012961 Ga0395898_0012961_1609_3012 455
64 3300044673 Ga0453683_0006817 Ga0453683_0006817_4211_5644 455
65 3300053104 Ga0500556_0000629 Ga0500556_0000629_5678_7075 455
66 3300009093 Ga0105240_10000238 Ga0105240_1000023870 456
67 3300025913 Ga0207695_10000668 Ga0207695_1000066834 456
68 3300006844 Ga0075428_100000041 Ga0075428_10000004189 457
69 3300006846 Ga0075430_100002410 Ga0075430_10000241029 457
70 3300006847 Ga0075431_100009123 Ga0075431_1000091237 457
71 3300006880 Ga0075429_100000093 Ga0075429_1000000937 457
72 3300009147 Ga0114129_10108444 Ga0114129_101084442 457
73 3300031727 Ga0316576_10045865 Ga0316576_100458653 457
74 3300035398 Ga0316574_0003523 Ga0316574_0003523_1037_2497 457
75 3300036712 Ga0316584_0031985 Ga0316584_0031985_1506_2966 457
76 3300050508 nmdc:mga09592_139_c1 nmdc:mga09592_139_c1_45839_47239 457
77 3300050509 nmdc:mga0qj67_1378_c1 nmdc:mga0qj67_1378_c1_7879_9279 457
78 3300050510 nmdc:mga06r32_1641_c1 nmdc:mga06r32_1641_c1_871_2271 457
79 3300009551 Ga0105238_10242957 Ga0105238_102429572 459
80 3300049572 Ga0501036_0010391 Ga0501036_0010391_6147_7538 460
81 3300049574 Ga0501038_0054353 Ga0501038_0054353_23_1414 460
82 3300049576 Ga0501040_0009018 Ga0501040_0009018_528_1919 460
83 3300049578 Ga0501042_0021134 Ga0501042_0021134_2173_3564 460
84 3300049580 Ga0501046_0068123 Ga0501046_0068123_301_1692 460
85 3300049582 Ga0501048_0049072 Ga0501048_0049072_1570_2961 460
86 3300049584 Ga0501068_0052858 Ga0501068_0052858_968_2359 460
87 3300049587 Ga0501071_0007484 Ga0501071_0007484_4428_5819 460
88 3300049588 Ga0501072_0028001 Ga0501072_0028001_1894_3285 460
89 3300049593 Ga0501077_0005006 Ga0501077_0005006_5229_6620 460
90 3300049741 Ga0501079_0121918 Ga0501079_0121918_72_1463 460
91 3300049742 Ga0501080_0067115 Ga0501080_0067115_339_1730 460
92 3300049743 Ga0501081_0010710 Ga0501081_0010710_4252_5643 460
93 3300049744 Ga0501083_0130491 Ga0501083_0130491_202_1593 460
94 3300049824 Ga0501045_0002262 Ga0501045_0002262_11538_12929 460
95 3300054114 Ga0501084_0012224 Ga0501084_0012224_326_1717 460
96 3300060353 Ga0501082_0007905 Ga0501082_0007905_4929_6320 460
97 3300005545 Ga0070695_100003590 Ga0070695_1000035903 461
98 3300005937 Ga0081455_10000656 Ga0081455_1000065627 461
99 3300049576 Ga0501040_0026514 Ga0501040_0026514_1659_3050 461
100 3300049578 Ga0501042_0055984 Ga0501042_0055984_1182_2573 461
101 3300049741 Ga0501079_0041141 Ga0501079_0041141_1773_3164 461
102 3300049743 Ga0501081_0025551 Ga0501081_0025551_910_2301 461
103 3300049744 Ga0501083_0059304 Ga0501083_0059304_473_1864 461
104 3300049824 Ga0501045_0047306 Ga0501045_0047306_801_2192 461
105 3300061734 Ga0530510_0023503 Ga0530510_0023503_2634_4025 461
106 3300013105 Ga0157369_10238976 Ga0157369_102389762 462
107 3300005336 Ga0070680_100005840 Ga0070680_1000058404 463
108 3300009545 Ga0105237_10059913 Ga0105237_100599135 463
109 3300005563 Ga0068855_100002013 Ga0068855_10000201313 464
110 3300009092 Ga0105250_10000024 Ga0105250_10000024192 464
111 3300009093 Ga0105240_10221055 Ga0105240_102210551 464
112 3300014968 Ga0157379_10000153 Ga0157379_1000015341 464
113 3300025711 Ga0207696_1000383 Ga0207696_100038325 464
114 3300025913 Ga0207695_10111524 Ga0207695_101115242 464
115 3300025949 Ga0207667_10009039 Ga0207667_100090392 464
116 3300046683 Ga0495658_0026881 Ga0495658_0026881_224_1642 464
117 3300053146 Ga0500588_0003284 Ga0500588_0003284_564_2033 464
118 3300005539 Ga0068853_100055217 Ga0068853_1000552172 466
119 3300028380 Ga0268265_10027888 Ga0268265_100278882 466
120 3300033180 Ga0307510_10000005 Ga0307510_10000005327 466
121 3300033180 Ga0307510_10012406 Ga0307510_100124062 466
122 3300048905 Ga0496102_0015776 Ga0496102_0015776_480_1889 466
123 3300048919 Ga0496116_0058656 Ga0496116_0058656_1039_2448 466
124 3300048920 Ga0496117_0000012 Ga0496117_0000012_261286_262695 466
125 3300048921 Ga0496118_0000003 Ga0496118_0000003_665678_667087 466
126 3300048922 Ga0496119_0002694 Ga0496119_0002694_1789_3198 466
127 3300048923 Ga0496120_0000796 Ga0496120_0000796_20821_22230 466
128 3300048923 Ga0496120_0038876 Ga0496120_0038876_810_2219 466
129 3300048929 Ga0496126_0043111 Ga0496126_0043111_1735_3144 466
130 3300037466 Ga0395898_0016243 Ga0395898_0016243_2640_4076 467
131 3300031995 Ga0307409_100008877 Ga0307409_1000088777 468
132 3300005354 Ga0070675_100066409 Ga0070675_1000664092 469
133 3300006028 Ga0070717_10017243 Ga0070717_100172432 476
134 3300031238 Ga0265332_10016960 Ga0265332_100169602 476
135 3300031733 Ga0316577_10102539 Ga0316577_101025392 479
136 3300005330 Ga0070690_100004384 Ga0070690_1000043846 480
137 3300005343 Ga0070687_100001293 Ga0070687_1000012937 480
138 3300005367 Ga0070667_100081978 Ga0070667_1000819782 480
139 3300005544 Ga0070686_100013144 Ga0070686_1000131443 480
140 3300025918 Ga0207662_10004123 Ga0207662_100041236 480
141 3300025936 Ga0207670_10058212 Ga0207670_100582122 480
142 3300042876 Ga0451577_0000006 Ga0451577_0000006_453931_455415 481
143 3300044673 Ga0453683_0000088 Ga0453683_0000088_101692_103176 481
144 3300044712 Ga0453684_0000037 Ga0453684_0000037_453926_455410 481
145 3300045051 Ga0451576_0036104 Ga0451576_0036104_3709_5193 481
146 3300044712 Ga0453684_0101739 Ga0453684_0101739_1855_3342 482
147 3300044673 Ga0453683_0000086 Ga0453683_0000086_42513_44003 483
148 3300044712 Ga0453684_0006653 Ga0453684_0006653_12798_14288 483
149 3300005548 Ga0070665_100009530 Ga0070665_1000095304 485
150 3300028379 Ga0268266_10033192 Ga0268266_100331922 485
151 3300039437 Ga0436365_1768796 Ga0436365_1768796_104_1567 487
152 3300047472 Ga0495686_0073819 Ga0495686_0073819_286_1785 488
153 3300005444 Ga0070694_100009381 Ga0070694_1000093813 489
154 3300009094 Ga0111539_10026331 Ga0111539_100263314 489
155 3300031616 Ga0307508_10020317 Ga0307508_100203173 490
156 3300005467 Ga0070706_100018272 Ga0070706_1000182721 491
157 3300028786 Ga0307517_10014125 Ga0307517_100141258 492
158 3300009553 Ga0105249_10101868 Ga0105249_101018682 493
159 3300006844 Ga0075428_100155897 Ga0075428_1001558972 494
160 3300009094 Ga0111539_10345402 Ga0111539_103454022 494
161 3300037312 Ga0395899_0017113 Ga0395899_0017113_1621_3123 494
162 3300037418 Ga0395900_0011626 Ga0395900_0011626_5776_7278 494
163 3300037466 Ga0395898_0142680 Ga0395898_0142680_347_1849 494
164 3300049586 Ga0501070_0024883 Ga0501070_0024883_1203_2690 495
165 3300049586 Ga0501070_0059046 Ga0501070_0059046_818_2305 495
166 3300060353 Ga0501082_0020591 Ga0501082_0020591_3462_4949 495
167 3300026121 Ga0207683_10016052 Ga0207683_100160526 496
168 3300031730 Ga0307516_10132081 Ga0307516_101320812 496
169 3300053094 Ga0500566_0010951 Ga0500566_0010951_846_2360 496
170 3300053095 Ga0500640_000763 Ga0500640_000763_6032_7546 496
171 3300053102 Ga0500554_000014 Ga0500554_000014_1233_2747 496
172 3300053119 Ga0500595_000103 Ga0500595_000103_30707_32221 496
173 3300053136 Ga0500559_0002617 Ga0500559_0002617_1767_3281 496
174 3300031901 Ga0307406_10016931 Ga0307406_100169312 497
175 3300053094 Ga0500566_0025822 Ga0500566_0025822_1531_3030 497
176 3300025910 Ga0207684_10007164 Ga0207684_100071646 500
177 3300035113 Ga0373936_0000015 Ga0373936_0000015_86985_88496 501
178 3300035241 Ga0373961_0000094 Ga0373961_0000094_24159_25670 501
179 3300005340 Ga0070689_100083494 Ga0070689_1000834941 502
180 3300005617 Ga0068859_100153240 Ga0068859_1001532402 502
181 3300005841 Ga0068863_100172825 Ga0068863_1001728252 502
182 3300006028 Ga0070717_10010466 Ga0070717_100104663 502
183 3300006931 Ga0097620_100153243 Ga0097620_1001532432 502
184 3300025936 Ga0207670_10008453 Ga0207670_100084532 502
185 3300025961 Ga0207712_10021691 Ga0207712_100216912 502
186 3300026088 Ga0207641_10077863 Ga0207641_100778632 502
187 3300031507 Ga0307509_10000060 Ga0307509_1000006043 502
188 3300031507 Ga0307509_10067099 Ga0307509_100670994 502
189 3300035090 Ga0373949_0001097 Ga0373949_0001097_1347_2861 502
190 3300053123 Ga0500614_002943 Ga0500614_002943_548_2062 502
191 3300053144 Ga0500585_005363 Ga0500585_005363_624_2162 502
192 3300053177 Ga0500636_0043243 Ga0500636_0043243_248_1762 502
193 3300005327 Ga0070658_10011649 Ga0070658_100116494 504

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

35

327

0.98

PF09190

DALR_2

DALR domain

384

450

0.95

PF23493

471

516

0.93

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

46

168

0.85

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

231

321

0.8

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

239

327

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tqo-assembly1.cif.gz_A structure of the cysteinyl-trna synthetase (cyss) from coxiella burnetii. 0.9431 1 438
3tqo-assembly1.cif.gz_A structure of the cysteinyl-trna synthetase (cyss) from coxiella burnetii. 0.9384 1 438
1li7-assembly1.cif.gz_A crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.9306 4 438
1li5-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase 0.9289 4 438
1li7-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.9287 4 438
ID Description Score Start End Superfamily
af_C0PHQ1_15_336_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9826 3 307 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9771 4 307 3.40.50.620
af_P9WFW1_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9649 2 307 3.40.50.620
af_Q2G2M6_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9644 4 307 3.40.50.620
af_A0A1D6M5V5_161_335_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9599 133 307 3.40.50.620
ID Description Score Start End GO Terms
AF-X0S473-F1-model_v4 cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) 0.9929 26 262 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A0T5Z8J2-F1-model_v4 tRNA synthetases class I (C) catalytic domain-containing protein 0.9917 4 110 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-X1VV56-F1-model_v4 tRNA synthetases class I catalytic domain-containing protein 0.9908 33 167 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A7X9BD74-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.9892 4 231 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-X0S473-F1-model_v4 cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) 0.9887 26 262 GO:0004817
GO:0005524
GO:0005829
GO:0006423

Feature Viewer

pLDDT pTM Quality
92.44 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map