F296967

General Info

Members Datasets Scaffolds Average Seq Length
193 172 160 690

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10004890|Ga0070717_100048905
Length 724
Sequence VSQLLEDERIAPAAAAGPGQPQKKMSQTVTATRKGRTFPLERTRNIGIMAHIDAGKTTTTERILFYTGRIHRMGEVHEGAATMDWMVQEQERGITITSAATACEWRKHRINIIDTPGHVDFTVEVERSLRVLDGAVAVFDAVSGVEPQSETVWRQADRYDVPRIAFINKMDRMGADFFGSLESIKQKLGANAVAIQLPIGREAGFNGIVDLIKQEAYIYTDDLGTTLEEHDVPEELHAQVEEYRHKMIEAAADYDDELMHAYLEETEISEELIMRALRKGTVMTQLVPVICGAALRNRGVQPMLDAVVDYLPSPLEKPAIEGLNPKTEKVETRAVKDDEPFTALAFKVATDPFVGKLTFFRVYSGTLQSGSYVYNATRGHKERIGRLLQMHANHREEIETVYAGDIAAAIGLKQTTTGDTLTAENQPIVLESMTFPEPVIAVAIEPKTKVDQEKMGTALQRLSEEDPTFRVHTDEETGQTIMEGMGELHLEVLVDRMLREFSVDANVGKPQVSYRETIRRPAKGTGRFVRQSGGRGQYGHAEIEIEPQEPGKGFEFEDKIVGGKIPREYIPAVEKGIREALENGILAGFPMVDVKASLYDGSYHDVDSSEMAFTVAGSMAVKDAVHKADPTLLEPIMKVEVNMPEEFMGDVMGDLTSRRGHILGMEGKGKSQVVKAHVPLANMFGYATELRSMTQGRASYAMEFDHYQEVPKSIGEEIVQKARS

Samples

Sample ID Description Type Environment
1 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
2 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
5 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
6 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
7 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
8 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
9 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
10 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
11 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
12 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
13 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
14 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
15 2909042592 Labrys sp. LIt4 Isolate Nodule
16 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
17 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
18 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
19 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
20 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
21 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
22 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
23 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
24 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
25 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
26 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
27 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
28 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
29 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
30 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
31 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
32 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
33 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
34 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
35 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
36 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
37 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
38 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
39 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
44 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
45 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
46 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
47 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
48 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
49 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
82 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
88 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
99 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
103 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
114 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
122 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
123 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
128 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
165 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
166 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.79
Metatranscriptomes 3.11
Isolates 17.1

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 8.29
Nodule 2.07
Rhizoplane 0.52
Rhizosphere 73.58
Stem 0
Stem Tuber 0
Unclassified 15.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1002386 3300003771 Bacteria 12724
2 Ga0055537_1005177 3300003773 Bacteria 3549
3 Ga0055534_1002309 3300003784 Bacteria 6693
4 Ga0055528_1001897 3300003790 Bacteria 11889
5 Ga0058692_1001834 3300003856 Bacteria 7470
6 Ga0065704_10082010 3300005289 Bacteria 3669
7 Ga0070668_100019774 3300005347 Bacteria 5071
8 Ga0070667_100003760 3300005367 Bacteria 12892
9 Ga0070709_10001097 3300005434 Bacteria 14943
10 Ga0070714_100000001 3300005435 Bacteria 469087
11 Ga0070713_100016621 3300005436 Bacteria 5535
12 Ga0070681_10053425 3300005458 Bacteria 4026
13 Ga0068867_100057526 3300005459 Bacteria 2880
14 Ga0070706_100002127 3300005467 Bacteria 20182
15 Ga0070679_100009818 3300005530 Bacteria 9055
16 Ga0070697_100007185 3300005536 Bacteria 8657
17 Ga0070696_100029524 3300005546 Bacteria 3748
18 Ga0068860_100089580 3300005843 Bacteria 2929
19 Ga0070717_10004890 3300006028 Bacteria 9749
20 Ga0075364_10007336 3300006051 Bacteria 6544
21 Ga0068865_100002340 3300006881 Bacteria 11178
22 Ga0105251_10018088 3300009011 Bacteria 3758
23 Ga0105240_10038758 3300009093 Bacteria 6110
24 Ga0105243_10031500 3300009148 Bacteria 4089
25 Ga0105239_10040234 3300010375 Bacteria 5122
26 Ga0197907_10252772 3300020069 Bacteria 3893
27 Ga0206355_1126656 3300020076 Bacteria 7571
28 Ga0213875_10007976 3300021388 Bacteria 5443
29 Ga0224712_10012094 3300022467 Bacteria 2702
30 Ga0209147_100210 3300025229 Bacteria 62804
31 Ga0209565_1000870 3300025263 Bacteria 16660
32 Ga0209673_1000204 3300025273 Bacteria 119618
33 Ga0209675_1000015 3300025291 Bacteria 403517
34 Ga0209676_1001936 3300025292 Bacteria 16690
35 Ga0209564_1000037 3300025295 Bacteria 414794
36 Ga0209050_1018200 3300025298 Bacteria 2743
37 Ga0209050_1018206 3300025298 Bacteria 2742
38 Ga0209051_1007058 3300025303 Bacteria 6212
39 Ga0209257_1002823 3300025304 Bacteria 16317
40 Ga0207713_1013338 3300025735 Bacteria 4337
41 Ga0207699_10000308 3300025906 Bacteria 26108
42 Ga0207707_10035774 3300025912 Bacteria 4343
43 Ga0207652_10011932 3300025921 Bacteria 7012
44 Ga0207646_10041541 3300025922 Bacteria 4134
45 Ga0207700_10011910 3300025928 Bacteria 5575
46 Ga0207664_10000007 3300025929 Bacteria 374590
47 Ga0207709_10000421 3300025935 Bacteria 41092
48 Ga0207704_10001284 3300025938 Bacteria 11229
49 Ga0207658_10001452 3300025986 Bacteria 18479
50 Ga0209371_1001408 3300027312 Bacteria 16504
51 Ga0268256_1001205 3300030500 Bacteria 16504
52 Ga0265316_10008283 3300031344 Bacteria 9662
53 Ga0307408_100033362 3300031548 Bacteria 3597
54 Ga0316575_10006392 3300031665 Bacteria 4234
55 Ga0316577_10007070 3300031733 Bacteria 5972
56 Ga0316577_10008118 3300031733 Bacteria 5612
57 Ga0316583_10003802 3300032133 Bacteria 5352
58 Ga0316592_1000955 3300033524 Bacteria 4438
59 Ga0316586_1000385 3300033527 Bacteria 4187
60 Ga0373923_0011289 3300035111 Bacteria 3272
61 Ga0373936_0000707 3300035113 Bacteria 11678
62 Ga0373946_0001178 3300035171 Bacteria 9058
63 Ga0373955_0000382 3300035172 Bacteria 18735
64 Ga0373924_0004412 3300035410 Bacteria 4912
65 Ga0373935_0004577 3300035692 Bacteria 8133
66 Ga0373927_0006962 3300035695 Bacteria 7676
67 Ga0373937_0001476 3300036401 Bacteria 19707
68 Ga0316582_0014885 3300036647 Bacteria 4430
69 Ga0316584_0096402 3300036712 Bacteria 2214
70 Ga0373925_0000435 3300037068 Bacteria 42178
71 Ga0436364_0103207 3300037853 Bacteria 3406
72 Ga0436364_0841780 3300037853 Bacteria 3640
73 Ga0237819_02030 3300038705 Bacteria 4470
74 Ga0400489_56651 3300039093 Bacteria 22335
75 Ga0436365_1136540 3300039437 Bacteria 40433
76 Ga0436363_1046285 3300039450 Bacteria 10399
77 Ga0436363_1342110 3300039450 Bacteria 5726
78 Ga0451577_0000019 3300042876 Bacteria 506976
79 Ga0451577_0003986 3300042876 Bacteria 15905
80 Ga0451577_0013644 3300042876 Bacteria 7597
81 Ga0451577_0022441 3300042876 Bacteria 5762
82 Ga0453683_0000507 3300044673 Bacteria 44208
83 Ga0453684_0000041 3300044712 Bacteria 690022
84 Ga0453684_0000057 3300044712 Bacteria 506899
85 Ga0453684_0000777 3300044712 Bacteria 110019
86 Ga0453684_0010849 3300044712 Bacteria 15438
87 Ga0453684_0074514 3300044712 Bacteria 4272
88 Ga0453684_0125667 3300044712 Bacteria 3087
89 Ga0453684_0163392 3300044712 Bacteria 2631
90 Ga0451576_0005544 3300045051 Bacteria 15765
91 Ga0451576_0015867 3300045051 Bacteria 8332
92 Ga0451576_0054278 3300045051 Bacteria 4197
93 Ga0451576_0069191 3300045051 Bacteria 3673
94 Ga0495592_0001001 3300046454 Bacteria 19639
95 Ga0495651_0003008 3300046462 Bacteria 13012
96 Ga0495653_0001410 3300046463 Bacteria 18727
97 Ga0495662_0017674 3300046476 Bacteria 3452
98 Ga0495664_0000529 3300046477 Bacteria 19180
99 Ga0495664_0017622 3300046477 Bacteria 4085
100 Ga0495608_0000030 3300046511 Bacteria 145828
101 Ga0495618_0001064 3300046514 Bacteria 18727
102 Ga0495628_0003536 3300046516 Bacteria 13994
103 Ga0495643_0004670 3300046522 Bacteria 9512
104 Ga0495642_0001995 3300046528 Bacteria 8543
105 Ga0495652_0002537 3300046529 Bacteria 18727
106 Ga0495640_0001378 3300046533 Bacteria 19143
107 Ga0495587_0000025 3300046536 Bacteria 147974
108 Ga0495645_0000001 3300046543 Bacteria 657910
109 Ga0495667_0000902 3300046559 Bacteria 19164
110 Ga0495634_0000008 3300046642 Bacteria 163983
111 Ga0495635_0000958 3300046663 Bacteria 19058
112 Ga0495661_0005406 3300046665 Bacteria 9083
113 Ga0495657_0001628 3300046675 Bacteria 19267
114 Ga0495599_0002435 3300046678 Bacteria 10839
115 Ga0495646_0000687 3300046680 Bacteria 18615
116 Ga0495600_0009797 3300046809 Bacteria 5925
117 Ga0495581_0034027 3300047315 Bacteria 2948
118 Ga0495604_0000002 3300047317 Bacteria 530904
119 Ga0495674_0000004 3300047319 Bacteria 531855
120 Ga0495680_0007472 3300047322 Bacteria 10013
121 Ga0495687_008722 3300047443 Bacteria 5758
122 Ga0495675_0002952 3300047444 Bacteria 10214
123 Ga0495684_0001494 3300047471 Bacteria 18699
124 Ga0495686_0072165 3300047472 Bacteria 2123
125 Ga0495686_0079229 3300047472 Bacteria 2009
126 Ga0495602_0002434 3300048088 Bacteria 18960
127 Ga0496114_0013111 3300048917 Bacteria 6641
128 Ga0496119_0009236 3300048922 Bacteria 8497
129 Ga0496122_0014262 3300048925 Bacteria 7697
130 Ga0496123_0003186 3300048926 Bacteria 18722
131 Ga0501031_0052661 3300049568 Bacteria 2652
132 Ga0501036_0020572 3300049572 Bacteria 5542
133 Ga0501039_0001446 3300049575 Bacteria 17478
134 Ga0501040_0001409 3300049576 Bacteria 15208
135 Ga0501042_0006601 3300049578 Bacteria 7546
136 Ga0501047_0129478 3300049581 Bacteria 2404
137 Ga0501048_0008255 3300049582 Bacteria 7877
138 Ga0501048_0097474 3300049582 Bacteria 2074
139 Ga0501069_0041152 3300049585 Bacteria 2553
140 Ga0501070_0137917 3300049586 Bacteria 2014
141 Ga0501074_0011216 3300049590 Bacteria 6511
142 Ga0501076_0005026 3300049592 Bacteria 9465
143 Ga0501238_000510 3300049671 Bacteria 4455
144 Ga0501079_0008952 3300049741 Bacteria 7578
145 Ga0501079_0059352 3300049741 Bacteria 2951
146 Ga0501080_0094271 3300049742 Bacteria 2780
147 Ga0501081_0012530 3300049743 Bacteria 5576
148 Ga0501083_0045074 3300049744 Bacteria 2984
149 Ga0501035_0151146 3300049822 Bacteria 2015
150 Ga0501045_0042356 3300049824 Bacteria 3314
151 nmdc:mga05p37_97503_c1 3300050507 Bacteria 3621
152 Ga0495601_0000023 3300053077 Bacteria 140141
153 Ga0495612_0000346 3300053078 Bacteria 18726
154 Ga0495595_0000327 3300053084 Bacteria 18544
155 Ga0495619_0000977 3300053085 Bacteria 18727
156 Ga0500556_0000009 3300053104 Bacteria 288111
157 Ga0501084_0002786 3300054114 Bacteria 14107
158 Ga0501084_0043396 3300054114 Bacteria 3762
159 Ga0587111_0000259 3300060346 Bacteria 4440
160 Ga0530510_0003443 3300061734 Bacteria 10878

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0069191 Ga0451576_0069191_1825_3618 585
2 3300047472 Ga0495686_0072165 Ga0495686_0072165_250_2094 611
3 3300037853 Ga0436364_0103207 Ga0436364_0103207_1429_3384 631
4 3300042876 Ga0451577_0003986 Ga0451577_0003986_12646_14682 638
5 3300044712 Ga0453684_0074514 Ga0453684_0074514_2081_4117 638
6 3300047472 Ga0495686_0079229 Ga0495686_0079229_52_1977 640
7 3300048917 Ga0496114_0013111 Ga0496114_0013111_21_1949 640
8 3300049586 Ga0501070_0137917 Ga0501070_0137917_62_1990 640
9 3300049822 Ga0501035_0151146 Ga0501035_0151146_71_1999 640
10 3300049582 Ga0501048_0097474 Ga0501048_0097474_136_2064 641
11 3300005458 Ga0070681_10053425 Ga0070681_100534252 666
12 3300005530 Ga0070679_100009818 Ga0070679_1000098186 666
13 3300020069 Ga0197907_10252772 Ga0197907_102527723 666
14 3300025912 Ga0207707_10035774 Ga0207707_100357742 666
15 3300025921 Ga0207652_10011932 Ga0207652_100119322 666
16 3300042876 Ga0451577_0013644 Ga0451577_0013644_4736_6799 667
17 3300044712 Ga0453684_0125667 Ga0453684_0125667_832_2895 667
18 3300045051 Ga0451576_0005544 Ga0451576_0005544_193_2256 667
19 3300005467 Ga0070706_100002127 Ga0070706_10000212718 671
20 3300036647 Ga0316582_0014885 Ga0316582_0014885_2386_4419 673
21 3300035111 Ga0373923_0011289 Ga0373923_0011289_270_2342 674
22 3300035113 Ga0373936_0000707 Ga0373936_0000707_8562_10634 674
23 3300035171 Ga0373946_0001178 Ga0373946_0001178_3217_5289 674
24 3300035172 Ga0373955_0000382 Ga0373955_0000382_343_2415 674
25 3300035692 Ga0373935_0004577 Ga0373935_0004577_5881_7953 674
26 3300035695 Ga0373927_0006962 Ga0373927_0006962_259_2331 674
27 3300036401 Ga0373937_0001476 Ga0373937_0001476_5469_7541 674
28 3300037068 Ga0373925_0000435 Ga0373925_0000435_16340_18412 674
29 3300046454 Ga0495592_0001001 Ga0495592_0001001_5296_7368 674
30 3300046462 Ga0495651_0003008 Ga0495651_0003008_5763_7835 674
31 3300046463 Ga0495653_0001410 Ga0495653_0001410_16378_18450 674
32 3300046476 Ga0495662_0017674 Ga0495662_0017674_165_2237 674
33 3300046477 Ga0495664_0000529 Ga0495664_0000529_16378_18450 674
34 3300046511 Ga0495608_0000030 Ga0495608_0000030_127380_129452 674
35 3300046514 Ga0495618_0001064 Ga0495618_0001064_278_2350 674
36 3300046516 Ga0495628_0003536 Ga0495628_0003536_11645_13717 674
37 3300046529 Ga0495652_0002537 Ga0495652_0002537_278_2350 674
38 3300046533 Ga0495640_0001378 Ga0495640_0001378_16378_18450 674
39 3300046536 Ga0495587_0000025 Ga0495587_0000025_16378_18450 674
40 3300046543 Ga0495645_0000001 Ga0495645_0000001_528217_530289 674
41 3300046559 Ga0495667_0000902 Ga0495667_0000902_731_2803 674
42 3300046642 Ga0495634_0000008 Ga0495634_0000008_161668_163740 674
43 3300046663 Ga0495635_0000958 Ga0495635_0000958_609_2681 674
44 3300046675 Ga0495657_0001628 Ga0495657_0001628_294_2366 674
45 3300046678 Ga0495599_0002435 Ga0495599_0002435_8037_10109 674
46 3300046680 Ga0495646_0000687 Ga0495646_0000687_178_2250 674
47 3300046809 Ga0495600_0009797 Ga0495600_0009797_3296_5368 674
48 3300047317 Ga0495604_0000002 Ga0495604_0000002_730_2802 674
49 3300047319 Ga0495674_0000004 Ga0495674_0000004_278_2350 674
50 3300047322 Ga0495680_0007472 Ga0495680_0007472_585_2657 674
51 3300047444 Ga0495675_0002952 Ga0495675_0002952_250_2322 674
52 3300047471 Ga0495684_0001494 Ga0495684_0001494_16378_18450 674
53 3300048088 Ga0495602_0002434 Ga0495602_0002434_539_2611 674
54 3300053077 Ga0495601_0000023 Ga0495601_0000023_137792_139864 674
55 3300053078 Ga0495612_0000346 Ga0495612_0000346_278_2350 674
56 3300053084 Ga0495595_0000327 Ga0495595_0000327_96_2168 674
57 3300053085 Ga0495619_0000977 Ga0495619_0000977_16378_18450 674
58 3300044673 Ga0453683_0000507 Ga0453683_0000507_12022_14097 675
59 3300044712 Ga0453684_0010849 Ga0453684_0010849_6976_9003 675
60 3300042876 Ga0451577_0022441 Ga0451577_0022441_3422_5494 677
61 3300044712 Ga0453684_0000041 Ga0453684_0000041_589447_591519 677
62 3300031665 Ga0316575_10006392 Ga0316575_100063921 680
63 3300006881 Ga0068865_100002340 Ga0068865_1000023404 682
64 3300025938 Ga0207704_10001284 Ga0207704_100012845 682
65 3300049581 Ga0501047_0129478 Ga0501047_0129478_148_2220 682
66 3300039093 Ga0400489_56651 Ga0400489_56651_10168_12237 684
67 iso_pu_bacteria 2510917027 2511180927 685
68 iso_pu_bacteria 2857465823 2857472345 685
69 iso_pu_bacteria 2857591370 2857597789 685
70 iso_pu_bacteria 2909042592 2909043593 685
71 iso_pu_bacteria 2915597211 2915598697 685
72 iso_pu_bacteria 2929183550 2929183843 685
73 iso_pu_bacteria 2508501114 2509078182 686
74 iso_pu_bacteria 2884298095 2884300457 686
75 3300005367 Ga0070667_100003760 Ga0070667_1000037608 687
76 3300005843 Ga0068860_100089580 Ga0068860_1000895802 687
77 3300025986 Ga0207658_10001452 Ga0207658_1000145217 687
78 3300031733 Ga0316577_10008118 Ga0316577_100081184 688
79 3300042876 Ga0451577_0000019 Ga0451577_0000019_195114_197210 688
80 3300044712 Ga0453684_0000057 Ga0453684_0000057_195037_197133 688
81 3300044712 Ga0453684_0000777 Ga0453684_0000777_30263_32338 688
82 3300050507 nmdc:mga05p37_97503_c1 nmdc:mga05p37_97503_c1_1372_3483 688
83 3300005347 Ga0070668_100019774 Ga0070668_1000197745 689
84 3300005434 Ga0070709_10001097 Ga0070709_100010979 689
85 3300005435 Ga0070714_100000001 Ga0070714_100000001175 689
86 3300005436 Ga0070713_100016621 Ga0070713_1000166214 689
87 3300005459 Ga0068867_100057526 Ga0068867_1000575262 689
88 3300005546 Ga0070696_100029524 Ga0070696_1000295243 689
89 3300006028 Ga0070717_10004890 Ga0070717_100048905 689
90 3300009093 Ga0105240_10038758 Ga0105240_100387588 689
91 3300010375 Ga0105239_10040234 Ga0105239_100402345 689
92 3300020076 Ga0206355_1126656 Ga0206355_11266567 689
93 3300025229 Ga0209147_100210 Ga0209147_10021050 689
94 3300025906 Ga0207699_10000308 Ga0207699_1000030840 689
95 3300025922 Ga0207646_10041541 Ga0207646_100415412 689
96 3300025928 Ga0207700_10011910 Ga0207700_100119104 689
97 3300025929 Ga0207664_10000007 Ga0207664_10000007166 689
98 3300031548 Ga0307408_100033362 Ga0307408_1000333622 689
99 3300032133 Ga0316583_10003802 Ga0316583_100038024 689
100 3300035410 Ga0373924_0004412 Ga0373924_0004412_2279_4351 689
101 3300049568 Ga0501031_0052661 Ga0501031_0052661_84_2189 689
102 3300049572 Ga0501036_0020572 Ga0501036_0020572_2946_5051 689
103 3300049575 Ga0501039_0001446 Ga0501039_0001446_9935_12040 689
104 3300049576 Ga0501040_0001409 Ga0501040_0001409_4357_6474 689
105 3300049578 Ga0501042_0006601 Ga0501042_0006601_3410_5515 689
106 3300049582 Ga0501048_0008255 Ga0501048_0008255_1708_3813 689
107 3300049585 Ga0501069_0041152 Ga0501069_0041152_231_2336 689
108 3300049590 Ga0501074_0011216 Ga0501074_0011216_4104_6209 689
109 3300049592 Ga0501076_0005026 Ga0501076_0005026_2188_4293 689
110 3300049741 Ga0501079_0008952 Ga0501079_0008952_1607_3712 689
111 3300049743 Ga0501081_0012530 Ga0501081_0012530_2834_4939 689
112 3300049744 Ga0501083_0045074 Ga0501083_0045074_533_2638 689
113 3300049824 Ga0501045_0042356 Ga0501045_0042356_364_2469 689
114 3300054114 Ga0501084_0002786 Ga0501084_0002786_4351_6456 689
115 3300054114 Ga0501084_0043396 Ga0501084_0043396_1344_3422 689
116 3300060346 Ga0587111_0000259 Ga0587111_0000259_138_2231 689
117 3300061734 Ga0530510_0003443 Ga0530510_0003443_2696_4801 689
118 3300005536 Ga0070697_100007185 Ga0070697_1000071855 690
119 3300021388 Ga0213875_10007976 Ga0213875_100079762 690
120 3300031344 Ga0265316_10008283 Ga0265316_100082835 690
121 3300031733 Ga0316577_10007070 Ga0316577_100070704 690
122 3300036712 Ga0316584_0096402 Ga0316584_0096402_125_2203 690
123 3300037853 Ga0436364_0841780 Ga0436364_0841780_1409_3484 690
124 3300039437 Ga0436365_1136540 Ga0436365_1136540_3643_5718 690
125 3300039450 Ga0436363_1046285 Ga0436363_1046285_1107_3182 690
126 3300039450 Ga0436363_1342110 Ga0436363_1342110_2081_4156 690
127 3300046477 Ga0495664_0017622 Ga0495664_0017622_1776_3854 690
128 3300047315 Ga0495581_0034027 Ga0495581_0034027_390_2465 690
129 3300048922 Ga0496119_0009236 Ga0496119_0009236_159_2234 690
130 3300048925 Ga0496122_0014262 Ga0496122_0014262_1822_3897 690
131 3300048926 Ga0496123_0003186 Ga0496123_0003186_15687_17762 690
132 3300049671 Ga0501238_000510 Ga0501238_000510_2236_4311 690
133 3300049741 Ga0501079_0059352 Ga0501079_0059352_137_2212 690
134 3300049742 Ga0501080_0094271 Ga0501080_0094271_488_2572 690
135 3300053104 Ga0500556_0000009 Ga0500556_0000009_154625_156700 690
136 3300045051 Ga0451576_0015867 Ga0451576_0015867_4175_6259 691
137 3300045051 Ga0451576_0054278 Ga0451576_0054278_441_2528 691
138 3300044712 Ga0453684_0163392 Ga0453684_0163392_318_2408 694
139 iso_pu_bacteria 8002869464 8002871441 694
140 3300022467 Ga0224712_10012094 Ga0224712_100120941 696
141 3300046522 Ga0495643_0004670 Ga0495643_0004670_1954_4056 697
142 3300046528 Ga0495642_0001995 Ga0495642_0001995_1485_3587 697
143 3300046665 Ga0495661_0005406 Ga0495661_0005406_5041_7143 697
144 3300047443 Ga0495687_008722 Ga0495687_008722_2796_4898 697
145 3300033524 Ga0316592_1000955 Ga0316592_10009553 698
146 3300033527 Ga0316586_1000385 Ga0316586_10003852 698
147 iso_pu_bacteria 2547132130 2547502375 709
148 iso_pu_bacteria 2747842428 2747951337 709
149 iso_pu_bacteria 2765235840 2765577779 709
150 iso_pu_bacteria 2816332141 2816519985 709
151 iso_pu_bacteria 2842391507 2842395686 709
152 iso_pu_bacteria 2842757796 2842759735 709
153 iso_pu_bacteria 2852649853 2852653096 709
154 iso_pu_bacteria 2857442823 2857445080 709
155 iso_pu_bacteria 2874220319 2874220384 709
156 iso_pu_bacteria 2919089067 2919091654 709
157 iso_pu_bacteria 2919134579 2919134939 709
158 iso_pu_bacteria 2928496128 2928498474 709
159 iso_pu_bacteria 2931380184 2931381959 709
160 iso_pu_bacteria 2937610967 2937611275 709
161 iso_pu_bacteria 2939589442 2939591855 709
162 iso_pu_bacteria 2939622612 2939626768 709
163 iso_pu_bacteria 2939626828 2939631134 709
164 iso_pu_bacteria 2941475908 2941477282 709
165 iso_pu_bacteria 2961047084 2961047149 709
166 iso_pu_bacteria 2961064222 2961068519 709
167 iso_pu_bacteria 2974307012 2974309980 709
168 iso_pu_bacteria 2977247770 2977250715 709
169 iso_pu_bacteria 2984514374 2984514800 709
170 iso_pu_bacteria 2987605356 2987605643 709
171 3300006051 Ga0075364_10007336 Ga0075364_100073364 711
172 3300003771 Ga0055526_1002386 Ga0055526_10023865 713
173 3300003773 Ga0055537_1005177 Ga0055537_10051773 713
174 3300003784 Ga0055534_1002309 Ga0055534_10023094 713
175 3300003790 Ga0055528_1001897 Ga0055528_10018975 713
176 3300003856 Ga0058692_1001834 Ga0058692_10018341 713
177 3300005289 Ga0065704_10082010 Ga0065704_100820101 713
178 3300009011 Ga0105251_10018088 Ga0105251_100180882 713
179 3300009148 Ga0105243_10031500 Ga0105243_100315004 713
180 3300025263 Ga0209565_1000870 Ga0209565_10008702 713
181 3300025273 Ga0209673_1000204 Ga0209673_100020413 713
182 3300025291 Ga0209675_1000015 Ga0209675_100001554 713
183 3300025292 Ga0209676_1001936 Ga0209676_100193613 713
184 3300025295 Ga0209564_1000037 Ga0209564_1000037314 713
185 3300025298 Ga0209050_1018200 Ga0209050_10182002 713
186 3300025298 Ga0209050_1018206 Ga0209050_10182062 713
187 3300025303 Ga0209051_1007058 Ga0209051_10070582 713
188 3300025304 Ga0209257_1002823 Ga0209257_10028232 713
189 3300025735 Ga0207713_1013338 Ga0207713_10133382 713
190 3300025935 Ga0207709_10000421 Ga0207709_1000042119 713
191 3300027312 Ga0209371_1001408 Ga0209371_10014082 713
192 3300030500 Ga0268256_1001205 Ga0268256_100120513 713
193 3300038705 Ga0237819_02030 Ga0237819_02030_535_2676 713

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03764

EFG_IV

Elongation factor G, domain IV

510

629

0.99

PF14492

EFG_III

Elongation Factor G, domain III

435

509

0.99

PF03144

GTP_EFTU_D2

Elongation factor Tu domain 2

355

422

0.98

PF22042

EF-G_D2

Elongation factor G domain 2

340

424

0.98

PF00679

EFG_C

Elongation factor G C-terminus

631

718

0.97

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

41

313

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ty0-assembly1.cif.gz_A 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. 0.973 4 407
5tv2-assembly1.cif.gz_A crystal structure of a fragment (1-405) of an elongation factor g from vibrio vulnificus cmcp6 0.9709 1 406
5ty0-assembly1.cif.gz_A 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. 0.9705 4 407
6b8d-assembly1.cif.gz_A 1.78 angstrom resolution crystal structure of n-terminal fragment (residues 1-405) of elongation factor g from haemophilus influenzae 0.9684 1 406
5tv2-assembly1.cif.gz_A crystal structure of a fragment (1-405) of an elongation factor g from vibrio vulnificus cmcp6 0.9683 1 406
ID Description Score Start End Superfamily
4myuA05 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9814 622 704 3.30.70.240
af_Q9USZ1_675_770_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9754 622 711 3.30.70.240
af_Q9VCX4_321_413_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9746 315 400 2.40.30.10
5ty0A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9727 4 292 3.40.50.300
af_A4I3S3_442_510_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.9699 419 481 3.30.70.870
ID Description Score Start End GO Terms
AF-B6VDP9-F1-model_v4 Elongation factor EF-G 0.9999 130 236 GO:0003746
GO:0005525
GO:0032790
AF-A0A485C1C5-F1-model_v4 Elongation factor G 0.9944 104 292 GO:0003746
GO:0003924
GO:0005525
GO:0032790
AF-A0A529L458-F1-model_v4 GTP-binding protein 0.9907 101 216 GO:0003924
GO:0005525
GO:0032790
AF-A0A484YZL1-F1-model_v4 Elongation factor G 0.9903 87 286 GO:0003746
GO:0003924
GO:0005525
GO:0032790
AF-K2BZK7-F1-model_v4 Elongation factor G 0.99 162 393 GO:0003746
GO:0005525
GO:0032790

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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