F296082

General Info

Members Datasets Scaffolds Average Seq Length
192 153 169 400

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0001254|Ga0451576_0001254_32924_34246
Length 440
Sequence VPVGAGFLAAGQAGVAGGMKIYEVGGAVRDALLGLPAGDRDWVVVGATPEAMLAAGYQPVGRDFPVFLHPKTHEEYALARTERKTAPGYHGFAFHASPEVTLEEDLARRDLTINAIARAPDGTLIDPFDGRADLAHKVLRHVGPAFAEDPVRVLRLARFAARFADFAIAPDTLALCRDMVAAGEVDHLVPERVWAEFAKALAERRPSRFFDVLRDCGALARLFPEIDCLTGVPQRPDYHPEGDAFVHTMLVLDAAAALGFSPEVRFAALLHDIGKGLTPAEVLPRHHGHEARGVAAGEALCARFRVPNAHRDLAILAIREHGRLHQLGRGEGLRPDTIVRVLREVDAFRRPERFERLLEVCVADDAGRTGERAPYVTDRRWHACLAAAQTVDAGVVAAACDNPADIPGRIDAARTHAVAARLAADASDENGDNNKTTDSP

Samples

Sample ID Description Type Environment
1 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
2 2547132512 Azospira oryzae 6a3 Isolate Unclassified
3 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
4 2643221585 Pelomonas sp. Root662 Isolate Unclassified
5 2738541337 Pelomonas sp. BT06 Isolate Unclassified
6 2738543013 Variovorax sp. BT01 Isolate Unclassified
7 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
8 2855730933 Achromobacter sp. HZ28 Isolate Nodule
9 2855767633 Achromobacter sp. HZ34 Isolate Nodule
10 2857564685 Duganella sp. R-74599 Isolate Unclassified
11 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
12 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
13 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
14 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
15 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
16 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
17 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
18 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
19 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
20 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
21 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
22 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
23 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
24 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
25 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
26 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
27 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
28 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
29 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
30 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
31 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
32 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
85 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
86 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
91 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
94 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
95 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
96 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
106 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
107 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
108 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
147 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
148 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
149 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 639633007 Azoarcus olearius BH72 Isolate Unclassified
153 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.02
Metatranscriptomes 0
Isolates 11.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.35
Nodule 1.56
Rhizoplane 1.04
Rhizosphere 58.33
Stem 0
Stem Tuber 0
Unclassified 17.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000081 3300001915 Bacteria 24107
2 JGI25151J46595_10000045 3300003187 Bacteria 169207
3 rootH1_10003216 3300003316 Bacteria 15917
4 rootH1_10009326 3300003316 Bacteria 7939
5 rootH1_10061549 3300003316 Bacteria 3909
6 rootL2_10077811 3300003322 Bacteria 2505
7 Ga0055538_1000085 3300003751 Bacteria 81616
8 Ga0055539_1000126 3300003752 Bacteria 81616
9 Ga0055533_1000133 3300003756 Bacteria 81616
10 Ga0055525_1000174 3300003759 Bacteria 81616
11 Ga0055541_1000085 3300003841 Bacteria 81616
12 Ga0055543_1011649 3300004625 Bacteria 1792
13 Ga0065165_1000621 3300005262 Bacteria 51523
14 Ga0070669_100016550 3300005353 Bacteria 5263
15 Ga0068853_100120985 3300005539 Bacteria 2335
16 Ga0070665_100082497 3300005548 Bacteria 3220
17 Ga0068855_100005276 3300005563 Bacteria 15776
18 Ga0068855_100222143 3300005563 Bacteria 2118
19 Ga0070664_100002780 3300005564 Bacteria 14124
20 Ga0068857_100074770 3300005577 Bacteria 3020
21 Ga0068854_100004286 3300005578 Bacteria 8988
22 Ga0068856_100004984 3300005614 Bacteria 13146
23 Ga0068861_100084347 3300005719 Bacteria 2494
24 Ga0075365_10000062 3300006038 Bacteria 32475
25 Ga0075365_10061569 3300006038 Bacteria 2507
26 Ga0075364_10000333 3300006051 Bacteria 23460
27 Ga0075364_10000794 3300006051 Bacteria 16653
28 Ga0075364_10038521 3300006051 Bacteria 3097
29 Ga0070716_100012816 3300006173 Bacteria 4260
30 Ga0075369_10000328 3300006186 Bacteria 14182
31 Ga0075427_10000079 3300006194 Bacteria 7591
32 Ga0075370_10000027 3300006353 Bacteria 51314
33 Ga0075370_10056511 3300006353 Bacteria 2230
34 Ga0075434_100010608 3300006871 Bacteria 8644
35 Ga0075429_100004466 3300006880 Bacteria 12036
36 Ga0105238_10000038 3300009551 Bacteria 162920
37 Ga0105239_10003380 3300010375 Bacteria 19579
38 Ga0157369_10000012 3300013105 Bacteria 271144
39 Ga0157372_10267551 3300013307 Bacteria 1985
40 Ga0182006_1001245 3300015261 Bacteria 15773
41 Ga0213872_10000167 3300021361 Bacteria 59191
42 Ga0213872_10002124 3300021361 Bacteria 11925
43 Ga0213872_10004235 3300021361 Bacteria 7693
44 Ga0209784_100021 3300025224 Bacteria 408534
45 Ga0209566_100039 3300025225 Bacteria 303368
46 Ga0209674_100036 3300025226 Bacteria 408534
47 Ga0209563_100040 3300025230 Bacteria 408534
48 Ga0209677_100023 3300025253 Bacteria 408534
49 Ga0209759_1006744 3300025256 Bacteria 3808
50 Ga0209025_1000039 3300025294 Bacteria 377396
51 Ga0207695_10000979 3300025913 Bacteria 50790
52 Ga0207671_10001710 3300025914 Bacteria 24779
53 Ga0207694_10000069 3300025924 Bacteria 124500
54 Ga0207689_10031925 3300025942 Bacteria 4379
55 Ga0207679_10001170 3300025945 Bacteria 16738
56 Ga0207667_10000043 3300025949 Bacteria 261426
57 Ga0207640_10015689 3300025981 Bacteria 4389
58 Ga0207658_10058214 3300025986 Bacteria 2875
59 Ga0207639_10101045 3300026041 Bacteria 2331
60 Ga0207702_10000339 3300026078 Bacteria 53740
61 Ga0207674_10092665 3300026116 Bacteria 3011
62 Ga0207675_100086813 3300026118 Bacteria 2938
63 Ga0209971_1001804 3300027682 Bacteria 5243
64 Ga0268266_10088062 3300028379 Bacteria 2717
65 Ga0265332_10000092 3300031238 Bacteria 78570
66 Ga0265327_10001019 3300031251 Bacteria 39618
67 Ga0265327_10029696 3300031251 Bacteria 3105
68 Ga0265316_10111451 3300031344 Bacteria 2072
69 Ga0307513_10003870 3300031456 Bacteria 20143
70 Ga0307509_10000032 3300031507 Bacteria 202919
71 Ga0307408_100000006 3300031548 Bacteria 472824
72 Ga0307516_10053859 3300031730 Bacteria 3933
73 Ga0307516_10105331 3300031730 Bacteria 2632
74 Ga0307518_10035817 3300031838 Bacteria 3605
75 Ga0316585_10020049 3300032137 Bacteria 2044
76 Ga0316574_0066138 3300035398 Bacteria 2277
77 Ga0316574_0130792 3300035398 Bacteria 1615
78 Ga0395899_0000019 3300037312 Bacteria 411777
79 Ga0395899_0006416 3300037312 Bacteria 9114
80 Ga0395898_0105390 3300037466 Bacteria 2704
81 Ga0395905_0009387 3300037471 Bacteria 9568
82 Ga0395905_0009731 3300037471 Bacteria 9379
83 Ga0400490_53710 3300038726 Bacteria 11550
84 Ga0400483_077599 3300039062 Bacteria 4498
85 Ga0436361_0043634 3300039447 Bacteria 18783
86 Ga0436361_0344800 3300039447 Bacteria 62567
87 Ga0436361_0432344 3300039447 Bacteria 27994
88 Ga0451807_2277825 3300041486 Bacteria 1980
89 Ga0450911_000234 3300042115 Bacteria 21144
90 Ga0450891_000309 3300042129 Bacteria 4999
91 Ga0450889_003559 3300042144 Bacteria 1539
92 Ga0451577_0174726 3300042876 Bacteria 1936
93 Ga0466982_0018102 3300044672 Bacteria 3940
94 Ga0453684_0026879 3300044712 Bacteria 8291
95 Ga0466970_0008435 3300044765 Bacteria 5186
96 Ga0451576_0000140 3300045051 Bacteria 183279
97 Ga0451576_0001254 3300045051 Bacteria 44591
98 Ga0451576_0005740 3300045051 Bacteria 15456
99 Ga0451576_0012045 3300045051 Bacteria 9762
100 Ga0451576_0021175 3300045051 Bacteria 7069
101 Ga0451576_0051953 3300045051 Bacteria 4296
102 Ga0466958_0078115 3300045836 Bacteria 2034
103 Ga0495617_000157 3300046452 Bacteria 43264
104 Ga0495606_0000880 3300046507 Bacteria 44927
105 Ga0495642_0003560 3300046528 Bacteria 6131
106 Ga0495654_0008012 3300046530 Bacteria 5866
107 Ga0495597_0000149 3300046542 Bacteria 61717
108 Ga0495597_0007383 3300046542 Bacteria 5587
109 Ga0495597_0014597 3300046542 Bacteria 3737
110 Ga0495635_0102137 3300046663 Bacteria 1960
111 Ga0495646_0004580 3300046680 Bacteria 8715
112 Ga0495687_001991 3300047443 Bacteria 17372
113 Ga0495673_0000185 3300047469 Bacteria 100703
114 Ga0495686_0106196 3300047472 Bacteria 1688
115 Ga0495602_0141691 3300048088 Bacteria 1902
116 Ga0496115_0015016 3300048918 Bacteria 5870
117 Ga0496121_0008650 3300048924 Bacteria 11904
118 Ga0496121_0014232 3300048924 Bacteria 8461
119 Ga0496122_0041818 3300048925 Bacteria 3616
120 Ga0496124_0083412 3300048927 Bacteria 2622
121 Ga0496125_0004511 3300048928 Bacteria 16008
122 Ga0496126_0055200 3300048929 Bacteria 3595
123 Ga0501031_0002645 3300049568 Bacteria 11396
124 Ga0501031_0127058 3300049568 Bacteria 1665
125 Ga0501032_0001756 3300049569 Bacteria 17122
126 Ga0501034_0004088 3300049571 Bacteria 16372
127 Ga0501034_0010420 3300049571 Bacteria 9687
128 Ga0501034_0049331 3300049571 Bacteria 4248
129 Ga0501034_0061281 3300049571 Bacteria 3778
130 Ga0501037_0004303 3300049573 Bacteria 10327
131 Ga0501037_0024662 3300049573 Bacteria 4446
132 Ga0501038_0005489 3300049574 Bacteria 11774
133 Ga0501039_0223299 3300049575 Bacteria 1481
134 Ga0501039_0294286 3300049575 Bacteria 1276
135 Ga0501043_0110925 3300049579 Bacteria 2153
136 Ga0501046_0018964 3300049580 Bacteria 5710
137 Ga0501046_0047630 3300049580 Bacteria 3398
138 Ga0501047_0009737 3300049581 Bacteria 9087
139 Ga0501068_0000509 3300049584 Bacteria 19755
140 Ga0501070_0036868 3300049586 Bacteria 4083
141 Ga0501073_0006242 3300049589 Bacteria 8891
142 Ga0501074_0052111 3300049590 Bacteria 2954
143 Ga0501080_0000288 3300049742 Bacteria 38150
144 Ga0501083_0016473 3300049744 Bacteria 5173
145 Ga0501035_0007505 3300049822 Bacteria 10185
146 Ga0501044_0003518 3300049823 Bacteria 17629
147 Ga0501044_0051588 3300049823 Bacteria 4241
148 nmdc:mga03n38_19237_c1 3300050490 Bacteria 2710
149 nmdc:mga00v17_1104_c1 3300050491 Bacteria 14208
150 nmdc:mga00v17_21510_c1 3300050491 Bacteria 3708
151 nmdc:mga00v17_31311_c1 3300050491 Bacteria 3137
152 nmdc:mga00v17_372_c1 3300050491 Bacteria 25447
153 nmdc:mga00v17_765_c2 3300050491 Bacteria 11435
154 nmdc:mga0yw44_49696_c1 3300050492 Bacteria 2532
155 nmdc:mga0yw44_83_c1 3300050492 Bacteria 33633
156 nmdc:mga06z11_149_c1 3300050494 Bacteria 27497
157 nmdc:mga06z11_3543_c1 3300050494 Bacteria 6051
158 nmdc:mga07m45_120_c1 3300050496 Bacteria 31269
159 nmdc:mga0n895_13961_c1 3300050512 Bacteria 7274
160 nmdc:mga0sz30_14_c2 3300050516 Bacteria 14187
161 Ga0500595_003933 3300053119 Bacteria 6805
162 Ga0500618_001461 3300053125 Bacteria 10499
163 Ga0500618_002540 3300053125 Bacteria 6792
164 Ga0500559_0039771 3300053136 Bacteria 2046
165 Ga0500600_0013075 3300053149 Bacteria 5038
166 Ga0500619_000378 3300053154 Bacteria 8293
167 Ga0500634_0067112 3300053161 Bacteria 1888
168 Ga0501084_0075538 3300054114 Bacteria 2823
169 Ga0501082_0184558 3300060353 Bacteria 1815

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0024662 Ga0501037_0024662_988_2139 319
2 3300049568 Ga0501031_0127058 Ga0501031_0127058_244_1353 323
3 3300049571 Ga0501034_0049331 Ga0501034_0049331_55_1164 329
4 3300049571 Ga0501034_0061281 Ga0501034_0061281_332_1513 336
5 3300049823 Ga0501044_0051588 Ga0501044_0051588_374_1513 338
6 3300053149 Ga0500600_0013075 Ga0500600_0013075_981_2108 349
7 3300053161 Ga0500634_0067112 Ga0500634_0067112_197_1276 350
8 iso_pu_bacteria 2881412998 2881416952 350
9 iso_pu_bacteria 8055225921 8055225929 350
10 3300028379 Ga0268266_10088062 Ga0268266_100880622 351
11 3300005539 Ga0068853_100120985 Ga0068853_1001209852 352
12 3300026041 Ga0207639_10101045 Ga0207639_101010452 352
13 3300037466 Ga0395898_0105390 Ga0395898_0105390_908_2032 352
14 3300049580 Ga0501046_0047630 Ga0501046_0047630_2190_3299 352
15 3300003187 JGI25151J46595_10000045 JGI25151J46595_100000458 353
16 3300006051 Ga0075364_10000794 Ga0075364_1000079412 353
17 3300025294 Ga0209025_1000039 Ga0209025_1000039172 353
18 3300050491 nmdc:mga00v17_765_c2 nmdc:mga00v17_765_c2_8798_9916 353
19 iso_pu_bacteria 2855730933 2855735392 353
20 iso_pu_bacteria 2855767633 2855771175 353
21 3300049568 Ga0501031_0002645 Ga0501031_0002645_5341_6465 355
22 3300049569 Ga0501032_0001756 Ga0501032_0001756_3520_4644 355
23 3300049571 Ga0501034_0010420 Ga0501034_0010420_3620_4744 355
24 3300049573 Ga0501037_0004303 Ga0501037_0004303_3715_4839 355
25 3300049574 Ga0501038_0005489 Ga0501038_0005489_4137_5261 355
26 3300049575 Ga0501039_0294286 Ga0501039_0294286_51_1175 355
27 3300049579 Ga0501043_0110925 Ga0501043_0110925_248_1372 355
28 3300049580 Ga0501046_0018964 Ga0501046_0018964_2613_3737 355
29 3300049581 Ga0501047_0009737 Ga0501047_0009737_7017_8141 355
30 3300049822 Ga0501035_0007505 Ga0501035_0007505_4118_5242 355
31 3300049823 Ga0501044_0003518 Ga0501044_0003518_11435_12559 355
32 3300031251 Ga0265327_10029696 Ga0265327_100296962 358
33 3300006051 Ga0075364_10038521 Ga0075364_100385212 361
34 3300048918 Ga0496115_0015016 Ga0496115_0015016_3100_4194 361
35 3300050491 nmdc:mga00v17_21510_c1 nmdc:mga00v17_21510_c1_26_1153 361
36 3300045836 Ga0466958_0078115 Ga0466958_0078115_686_1789 363
37 3300003322 rootL2_10077811 rootL2_100778113 366
38 3300046542 Ga0495597_0000149 Ga0495597_0000149_43868_45118 373
39 iso_pu_bacteria 2547132512 2548848338 375
40 3300044712 Ga0453684_0026879 Ga0453684_0026879_1503_2783 381
41 3300049571 Ga0501034_0004088 Ga0501034_0004088_6591_7832 381
42 3300003316 rootH1_10061549 rootH1_100615492 384
43 3300003751 Ga0055538_1000085 Ga0055538_100008522 384
44 3300003752 Ga0055539_1000126 Ga0055539_100012622 384
45 3300003756 Ga0055533_1000133 Ga0055533_100013322 384
46 3300003759 Ga0055525_1000174 Ga0055525_100017422 384
47 3300003841 Ga0055541_1000085 Ga0055541_100008555 384
48 3300006186 Ga0075369_10000328 Ga0075369_100003282 384
49 3300006194 Ga0075427_10000079 Ga0075427_100000798 384
50 3300006353 Ga0075370_10000027 Ga0075370_1000002719 384
51 3300006871 Ga0075434_100010608 Ga0075434_1000106084 384
52 3300006880 Ga0075429_100004466 Ga0075429_1000044664 384
53 3300048929 Ga0496126_0055200 Ga0496126_0055200_1746_2987 384
54 3300050490 nmdc:mga03n38_19237_c1 nmdc:mga03n38_19237_c1_1242_2438 384
55 3300050491 nmdc:mga00v17_31311_c1 nmdc:mga00v17_31311_c1_493_1689 384
56 3300050494 nmdc:mga06z11_149_c1 nmdc:mga06z11_149_c1_25874_27070 384
57 3300050496 nmdc:mga07m45_120_c1 nmdc:mga07m45_120_c1_28618_29814 384
58 3300050512 nmdc:mga0n895_13961_c1 nmdc:mga0n895_13961_c1_5064_6260 384
59 3300050516 nmdc:mga0sz30_14_c2 nmdc:mga0sz30_14_c2_841_2037 384
60 3300021361 Ga0213872_10004235 Ga0213872_100042358 385
61 3300039447 Ga0436361_0432344 Ga0436361_0432344_4840_6075 385
62 3300006038 Ga0075365_10061569 Ga0075365_100615692 386
63 3300006051 Ga0075364_10000333 Ga0075364_1000033312 386
64 3300025224 Ga0209784_100021 Ga0209784_10002185 386
65 3300025225 Ga0209566_100039 Ga0209566_10003986 386
66 3300025226 Ga0209674_100036 Ga0209674_10003685 386
67 3300025230 Ga0209563_100040 Ga0209563_10004085 386
68 3300025253 Ga0209677_100023 Ga0209677_10002385 386
69 3300050491 nmdc:mga00v17_1104_c1 nmdc:mga00v17_1104_c1_11713_12888 386
70 3300050492 nmdc:mga0yw44_49696_c1 nmdc:mga0yw44_49696_c1_313_1488 386
71 3300013307 Ga0157372_10267551 Ga0157372_102675512 388
72 3300042115 Ga0450911_000234 Ga0450911_000234_4439_5680 388
73 3300048927 Ga0496124_0083412 Ga0496124_0083412_723_1964 388
74 3300048928 Ga0496125_0004511 Ga0496125_0004511_4266_5507 390
75 3300003316 rootH1_10003216 rootH1_1000321618 393
76 3300006038 Ga0075365_10000062 Ga0075365_1000006213 393
77 3300006173 Ga0070716_100012816 Ga0070716_1000128162 393
78 3300046542 Ga0495597_0014597 Ga0495597_0014597_586_1806 393
79 3300047443 Ga0495687_001991 Ga0495687_001991_6705_7925 393
80 3300050491 nmdc:mga00v17_372_c1 nmdc:mga00v17_372_c1_9540_10736 393
81 3300050492 nmdc:mga0yw44_83_c1 nmdc:mga0yw44_83_c1_22364_23560 393
82 3300050494 nmdc:mga06z11_3543_c1 nmdc:mga06z11_3543_c1_1428_2624 393
83 3300025986 Ga0207658_10058214 Ga0207658_100582142 395
84 3300006353 Ga0075370_10056511 Ga0075370_100565112 398
85 3300025942 Ga0207689_10031925 Ga0207689_100319256 399
86 3300005548 Ga0070665_100082497 Ga0070665_1000824973 400
87 3300045051 Ga0451576_0005740 Ga0451576_0005740_1017_2237 401
88 3300038726 Ga0400490_53710 Ga0400490_53710_3844_5115 402
89 3300041486 Ga0451807_2277825 Ga0451807_2277825_245_1501 402
90 3300046528 Ga0495642_0003560 Ga0495642_0003560_82_1305 402
91 3300046530 Ga0495654_0008012 Ga0495654_0008012_3643_4932 402
92 3300046542 Ga0495597_0007383 Ga0495597_0007383_4297_5520 402
93 3300031251 Ga0265327_10001019 Ga0265327_1000101940 403
94 3300031344 Ga0265316_10111451 Ga0265316_101114512 403
95 3300039062 Ga0400483_077599 Ga0400483_077599_503_1777 403
96 3300044765 Ga0466970_0008435 Ga0466970_0008435_2031_3245 403
97 3300004625 Ga0055543_1011649 Ga0055543_10116492 404
98 3300005262 Ga0065165_1000621 Ga0065165_100062135 404
99 3300021361 Ga0213872_10000167 Ga0213872_100001677 404
100 3300031730 Ga0307516_10105331 Ga0307516_101053313 404
101 3300039447 Ga0436361_0043634 Ga0436361_0043634_7008_8225 404
102 iso_pu_bacteria 2738541337 2739053384 404
103 iso_pu_bacteria 2857564685 2857567883 404
104 3300005719 Ga0068861_100084347 Ga0068861_1000843472 405
105 3300021361 Ga0213872_10002124 Ga0213872_100021248 405
106 3300026118 Ga0207675_100086813 Ga0207675_1000868133 405
107 3300035398 Ga0316574_0066138 Ga0316574_0066138_52_1284 405
108 3300039447 Ga0436361_0344800 Ga0436361_0344800_57333_58589 405
109 3300048924 Ga0496121_0008650 Ga0496121_0008650_7821_9062 405
110 iso_pu_bacteria 2521172590 2521560223 405
111 iso_pu_bacteria 2551306416 2553005025 405
112 iso_pu_bacteria 2818991449 2819616580 405
113 iso_pu_bacteria 2904439833 2904440736 405
114 iso_pu_bacteria 2904530477 2904535335 405
115 iso_pu_bacteria 2904584206 2904589186 405
116 iso_pu_bacteria 2904589729 2904594596 405
117 iso_pu_bacteria 2904601388 2904605823 405
118 iso_pu_bacteria 2919046199 2919048901 405
119 iso_pu_bacteria 2919079590 2919084094 405
120 iso_pu_bacteria 2923510766 2923513976 405
121 iso_pu_bacteria 2928130867 2928134750 405
122 3300003316 rootH1_10009326 rootH1_100093269 406
123 3300005353 Ga0070669_100016550 Ga0070669_1000165505 406
124 3300031238 Ga0265332_10000092 Ga0265332_1000009221 406
125 3300031507 Ga0307509_10000032 Ga0307509_1000003218 406
126 3300032137 Ga0316585_10020049 Ga0316585_100200492 406
127 3300045051 Ga0451576_0000140 Ga0451576_0000140_14849_16069 406
128 3300053136 Ga0500559_0039771 Ga0500559_0039771_65_1324 406
129 3300027682 Ga0209971_1001804 Ga0209971_10018043 407
130 3300037312 Ga0395899_0000019 Ga0395899_0000019_107826_109064 407
131 3300042129 Ga0450891_000309 Ga0450891_000309_1447_2691 407
132 3300042144 Ga0450889_003559 Ga0450889_003559_285_1529 407
133 3300046680 Ga0495646_0004580 Ga0495646_0004580_2454_3680 407
134 3300031456 Ga0307513_10003870 Ga0307513_100038702 408
135 iso_pu_bacteria 2738543013 2739249514 408
136 iso_pu_bacteria 2894023352 2894023879 408
137 iso_pu_bacteria 639633007 639785604 408
138 3300005577 Ga0068857_100074770 Ga0068857_1000747701 409
139 3300005578 Ga0068854_100004286 Ga0068854_1000042866 409
140 3300009551 Ga0105238_10000038 Ga0105238_1000003823 409
141 3300010375 Ga0105239_10003380 Ga0105239_100033804 409
142 3300015261 Ga0182006_1001245 Ga0182006_100124511 409
143 3300025256 Ga0209759_1006744 Ga0209759_10067446 409
144 3300025913 Ga0207695_10000979 Ga0207695_1000097914 409
145 3300025914 Ga0207671_10001710 Ga0207671_1000171020 409
146 3300025924 Ga0207694_10000069 Ga0207694_1000006984 409
147 3300025981 Ga0207640_10015689 Ga0207640_100156895 409
148 3300026116 Ga0207674_10092665 Ga0207674_100926651 409
149 3300035398 Ga0316574_0130792 Ga0316574_0130792_272_1519 409
150 3300037312 Ga0395899_0006416 Ga0395899_0006416_4912_6144 409
151 3300037471 Ga0395905_0009731 Ga0395905_0009731_4663_5895 409
152 3300031548 Ga0307408_100000006 Ga0307408_100000006336 410
153 3300045051 Ga0451576_0021175 Ga0451576_0021175_5760_7016 410
154 3300045051 Ga0451576_0051953 Ga0451576_0051953_214_1455 410
155 3300053125 Ga0500618_002540 Ga0500618_002540_3361_4596 410
156 3300005563 Ga0068855_100005276 Ga0068855_1000052763 411
157 3300025949 Ga0207667_10000043 Ga0207667_10000043220 411
158 3300031730 Ga0307516_10053859 Ga0307516_100538593 411
159 3300042876 Ga0451577_0174726 Ga0451577_0174726_677_1924 411
160 3300045051 Ga0451576_0001254 Ga0451576_0001254_32924_34246 411
161 3300045051 Ga0451576_0012045 Ga0451576_0012045_3701_4969 411
162 3300048088 Ga0495602_0141691 Ga0495602_0141691_42_1322 411
163 3300049575 Ga0501039_0223299 Ga0501039_0223299_19_1257 411
164 3300049584 Ga0501068_0000509 Ga0501068_0000509_1200_2441 411
165 3300049586 Ga0501070_0036868 Ga0501070_0036868_2267_3508 411
166 3300049589 Ga0501073_0006242 Ga0501073_0006242_2494_3735 411
167 3300049590 Ga0501074_0052111 Ga0501074_0052111_670_1911 411
168 3300049742 Ga0501080_0000288 Ga0501080_0000288_30127_31368 411
169 3300049744 Ga0501083_0016473 Ga0501083_0016473_1627_2868 411
170 3300054114 Ga0501084_0075538 Ga0501084_0075538_969_2210 411
171 3300060353 Ga0501082_0184558 Ga0501082_0184558_44_1285 411
172 iso_pu_bacteria 2643221585 2643934135 411
173 3300005563 Ga0068855_100222143 Ga0068855_1002221432 412
174 3300031838 Ga0307518_10035817 Ga0307518_100358172 412
175 3300037471 Ga0395905_0009387 Ga0395905_0009387_5837_7114 412
176 3300044672 Ga0466982_0018102 Ga0466982_0018102_1371_2633 412
177 3300046452 Ga0495617_000157 Ga0495617_000157_38607_39860 412
178 3300046507 Ga0495606_0000880 Ga0495606_0000880_5294_6547 412
179 3300046663 Ga0495635_0102137 Ga0495635_0102137_451_1746 412
180 3300047469 Ga0495673_0000185 Ga0495673_0000185_42867_44123 412
181 3300047472 Ga0495686_0106196 Ga0495686_0106196_362_1615 412
182 3300048924 Ga0496121_0014232 Ga0496121_0014232_4517_5770 412
183 3300048925 Ga0496122_0041818 Ga0496122_0041818_71_1324 412
184 3300053119 Ga0500595_003933 Ga0500595_003933_4595_5890 412
185 3300053125 Ga0500618_001461 Ga0500618_001461_6447_7703 412
186 3300053154 Ga0500619_000378 Ga0500619_000378_2851_4146 412
187 3300001915 JGI24741J21665_1000081 JGI24741J21665_100008112 414
188 3300005564 Ga0070664_100002780 Ga0070664_1000027803 414
189 3300005614 Ga0068856_100004984 Ga0068856_10000498416 414
190 3300013105 Ga0157369_10000012 Ga0157369_1000001215 414
191 3300025945 Ga0207679_10001170 Ga0207679_1000117025 414
192 3300026078 Ga0207702_10000339 Ga0207702_1000033937 414

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12627

PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

165

229

0.97

PF01966

HD

HD domain

244

364

0.82

PF01743

PolyA_pol

Poly A polymerase head domain

21

140

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1miy-assembly1.cif.gz_A crystal structure of bacillus stearothermophilus cca-adding enzyme in complex with ctp 0.7366 3 402
6tvz-assembly1.cif.gz_A structure of a psychrophilic cca-adding enzyme crystallized in the xtalcontroller device 0.7226 3 403
4x4w-assembly1.cif.gz_B-2 crystal structure of the full-length human mitochondrial cca-adding enzyme 0.7187 2 404
7otr-assembly1.cif.gz_A crystal structure of a psychrophilic cca-adding enzyme determined by sad phasing 0.7091 3 403
6qy6-assembly1.cif.gz_A crystal structure of the cca-adding enzyme of a psychrophilic organism 0.7089 3 403
ID Description Score Start End Superfamily
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.9879 128 349 1.10.3090.10
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.9663 128 349 1.10.3090.10
af_P06961_1_124_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9597 1 124 3.30.460.10
af_P06961_1_124_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9448 1 124 3.30.460.10
3h37A02 Mainly Alpha;Orthogonal Bundle;Hydrophobic Seed Protein; 0.8902 121 199 1.10.110.30
ID Description Score Start End GO Terms
AF-A0A1G0R5M7-F1-model_v4 deleted 0.9924 164 400
AF-A0A381EW65-F1-model_v4 deleted 0.9899 181 405
AF-A0A257GT81-F1-model_v4 Multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 0.9879 206 378 GO:0016740
AF-A0A2X5NFR7-F1-model_v4 Multifunctional CCA protein 0.9876 161 367
AF-A0A378VZ18-F1-model_v4 tRNA nucleotidyltransferase (EC 2.7.7.72) 0.9869 203 314 GO:0160016

Feature Viewer

pLDDT pTM Quality
93.56 0.89 High
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Predicted Structure (AlphaFold2)

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