F295863

General Info

Members Datasets Scaffolds Average Seq Length
192 145 169 1732

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10000842|Ga0307508_100008425
Length 1867
Sequence MSEVAAPFLIFLRRGIEAGGFSTDDALAALLPLFEQVAGAHQSGHVAPLDGVNNLAVDDGQLKINSDEKRAPRKNPVKIEGLQKPAASALDVVGESRRTADVDAGSLEHRDLWVADAGAEITRPVYIPGYVAWEHRAGHHDQLTDVFSLGLILASCACGLDLTDPEDVALFASNRGNLFAINAQLHPVVASMILQMTELNRHRRVQTVEVAIDRLRRYRDQAADYAVDFSRLKGYRESPPTERGKIILTHLRNRLFEISRRNRLIHFKPTLQTLNLTLASVPLMLDHRNIKPEQLFLWHSGVANALAEGSSIILGKYVRFEDAPYASGVLDQIIATERRDRQEFGFAQLRLVICFLRWHNLKETPQERIHSPLLLLPVELTRKKGVRDAYVLKSLSSEAEVNPALRHHLRQLYGLNLPETVDLAETTLDAFHSLLAEQIRASEPGVVLNKLERPQIELIHERAKQRLDQFRRRQRLSHRGARRFESFDYSYDRERYRPLGLQLFTSRVKPARAPFAEVTGKPPAPRQPHIVDPDVPPVRQPENAPIASGDAVGEGRSRISEKETNLYAVKEPQGSGNPYQWDFDLCSQTLGNFNYRKMSLVQDYASLLEEELPGPAFDAIFSLQPRAAGPAPAALPLRDQYPVVECDPTQMLAVARARKTESYIIQGPPGTGKSQTITNLIADFVARGKRVLFVCEKRAAIDVVFHRLGRQGLDELCCLIHDSQTDKREFIRNLKQTYEAFLNQPVDETIETKRAELVRQMEIELAALQRWSVALEARVAGCSLTVRDLLVRLVELHDQVVELDPLAFEQVPPYPVWLPHAEIVRSLSAGLKRIGGRASLAQHSFRHLTEKALTGSQPLAAITSAVDESMQLLTKIGSALEALGDTVAVRTLNDIEAVIAYADEILPAAVADALDLLNPRGSRTRKVAKAVREKRATEQELAKARKNTAAWKNKLSPSDTTAALAQAKKFETSSLRWLKPAFWRLRGVMNSHYDFSSHQIRPLWSLVLLNLDEEHAAKAASDAANESMIAAFGEMDAEEGVRLIEDFPSRVEALPAAARTLHAYLVENSEATYVVENLAALRPVMKRLGECLAVAIADYSQFERTELVAELKQLRADLVWLPDVLPILADVLHLPVELQQALRRLPLSDQQLETAMARKSLVEACQSDRAFEATDGRVIAQRVGRLQKSHREWLGLNARWIHQQVRREFLRKVQLSTTPAAQLTEDQKELKRLYATGRRELEHEFSKTMRHRSIRDLADDETGIVLRDLKPVWLMSPLSVSDTLPLAADAFDVVIFDEASQILVEEAVPAVYRAQQVIVVGDEMQLPPTNFFSATRSDEEPLIESEEASAAIQDLDADSFLTQSARNLPSTMLGWHYRSRYESLISFSNHAFYEARLLTIPDRQLPPASLSELVIKTPADAVANVDALLGRPLSFHFHPEAVYERRSNTAEAETIAQMVRELLVRQTGLSLGVVAFSEAQQGEIESALTRLGADDATFRNRLEAEYEREEHGQFCGLFVKNLENVQGDERDVILLSVCYGYDRNRRMLMNFGPINQRGGEKRLNVIFSRARQHMAVISSIRHFDITNDYNDGANCLRNFLEYSAACSIGDGPTSQRILQSTNPVGPARAGALSADPVATQLAVALRERGFFVETNVGQSTFRLPLAVRKIADTAHTLGVLIDDQSHYAQHDLLERYLLRLGVLQAFGWRVIQVFTKDWHYDRVAVLRQIEEALNGILPAPLDESNASAAPTLARVEEVAAKYDATAAKAIVSQEISKPVPTVAKAPIAPSIPSQPRYFICVEDGASKFWEVVVNGTELTVRFGRLGTKGQTQTKVFTSADAAAHEKEKLIRSKMGKGYEERGRGGVA

Samples

Sample ID Description Type Environment
1 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
2 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
3 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
4 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
5 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
6 2643221638 Duganella sp. Root336D2 Isolate Unclassified
7 2643221672 Variovorax sp. Root434 Isolate Unclassified
8 2643221683 Variovorax sp. Root473 Isolate Unclassified
9 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
10 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
11 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
12 2738541307 Variovorax sp. GV008 Isolate Unclassified
13 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
14 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
15 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
16 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
17 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
18 2928070936 Variovorax gossypii 1167 Isolate Unclassified
19 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
20 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
21 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
22 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
23 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
24 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
27 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
28 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
29 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
30 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
31 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
32 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
33 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
34 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
35 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
36 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
37 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
38 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
39 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
40 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
41 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
54 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
55 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
98 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
142 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
145 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.02
Metatranscriptomes 0
Isolates 11.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.02
Nodule 1.56
Rhizoplane 2.08
Rhizosphere 42.19
Stem 0
Stem Tuber 0
Unclassified 16.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1000591 3300002739 Bacteria 7215
2 JGI25152J39213_1002511 3300002773 Bacteria 6925
3 JGI25151J46595_10000008 3300003187 Bacteria 334180
4 JGI25151J46595_10002534 3300003187 Bacteria 10846
5 JGI25153J46596_10000273 3300003215 Bacteria 40691
6 JGI25153J46596_10005222 3300003215 Bacteria 6835
7 JGI25161J50226_1000711 3300003374 Bacteria 13063
8 Ga0055538_1000010 3300003751 Bacteria 376599
9 Ga0055539_1000015 3300003752 Bacteria 376599
10 Ga0055533_1000018 3300003756 Bacteria 376599
11 Ga0055525_1000020 3300003759 Bacteria 376599
12 Ga0055526_1003416 3300003771 Bacteria 10085
13 Ga0055524_1000079 3300003775 Bacteria 120203
14 Ga0055536_1002449 3300003781 Bacteria 10426
15 Ga0055536_1004260 3300003781 Bacteria 7380
16 Ga0055530_10002999 3300003791 Bacteria 10136
17 Ga0055530_10003013 3300003791 Bacteria 10085
18 Ga0055530_10003787 3300003791 Bacteria 8336
19 Ga0055540_1002082 3300003792 Bacteria 10997
20 Ga0055540_1003661 3300003792 Bacteria 7317
21 Ga0055531_10000205 3300003794 Bacteria 65042
22 Ga0055531_10002960 3300003794 Bacteria 11045
23 Ga0055531_10004351 3300003794 Bacteria 8663
24 Ga0055541_1000011 3300003841 Bacteria 376599
25 Ga0055543_1000975 3300004625 Bacteria 12953
26 Ga0065165_1003006 3300005262 Bacteria 12754
27 Ga0065165_1005683 3300005262 Bacteria 6873
28 Ga0070670_100003497 3300005331 Bacteria 13052
29 Ga0070679_100009189 3300005530 Bacteria 9336
30 Ga0068857_100002372 3300005577 Bacteria 15347
31 Ga0068859_100008347 3300005617 Bacteria 10495
32 Ga0068864_100001044 3300005618 Bacteria 23241
33 Ga0068863_100000019 3300005841 Bacteria 205585
34 Ga0068858_100000040 3300005842 Bacteria 135911
35 Ga0070717_10000035 3300006028 Bacteria 126598
36 Ga0070717_10000131 3300006028 Bacteria 55195
37 Ga0075364_10006151 3300006051 Bacteria 7029
38 Ga0075428_100004843 3300006844 Bacteria 14930
39 Ga0075429_100016064 3300006880 Bacteria 6484
40 Ga0097620_100008347 3300006931 Bacteria 10495
41 Ga0079104_1000100 3300006946 Bacteria 126924
42 Ga0105251_10000020 3300009011 Bacteria 138675
43 Ga0105251_10000041 3300009011 Bacteria 115207
44 Ga0105250_10000109 3300009092 Bacteria 74557
45 Ga0105240_10001416 3300009093 Bacteria 41135
46 Ga0114129_10001384 3300009147 Bacteria 32641
47 Ga0114129_10002238 3300009147 Bacteria 26708
48 Ga0105243_10004270 3300009148 Bacteria 11318
49 Ga0105238_10009411 3300009551 Bacteria 9782
50 Ga0157378_10015486 3300013297 Bacteria 6681
51 Ga0157375_10000017 3300013308 Bacteria 286152
52 Ga0157380_10005495 3300014326 Bacteria 8857
53 Ga0163161_10000112 3300017792 Bacteria 77235
54 Ga0213873_10000009 3300021358 Bacteria 237102
55 Ga0213872_10000259 3300021361 Bacteria 45682
56 Ga0213876_10000004 3300021384 Bacteria 943822
57 Ga0209436_100785 3300025208 Bacteria 13129
58 Ga0209784_100025 3300025224 Bacteria 376681
59 Ga0209566_100025 3300025225 Bacteria 376681
60 Ga0209674_100042 3300025226 Bacteria 376681
61 Ga0209563_100046 3300025230 Bacteria 376681
62 Ga0207425_1001573 3300025245 Bacteria 9257
63 Ga0209677_100027 3300025253 Bacteria 376681
64 Ga0209677_100300 3300025253 Bacteria 32444
65 Ga0209129_1000113 3300025258 Bacteria 145178
66 Ga0209129_1001891 3300025258 Bacteria 11066
67 Ga0209130_1000836 3300025284 Bacteria 25748
68 Ga0209130_1003342 3300025284 Bacteria 6897
69 Ga0209675_1002358 3300025291 Bacteria 9747
70 Ga0209675_1003007 3300025291 Bacteria 8294
71 Ga0209676_1000005 3300025292 Bacteria 1076001
72 Ga0209676_1000437 3300025292 Bacteria 71544
73 Ga0209676_1000595 3300025292 Bacteria 53773
74 Ga0209025_1000030 3300025294 Bacteria 441196
75 Ga0209025_1001078 3300025294 Bacteria 39551
76 Ga0209025_1001215 3300025294 Bacteria 36003
77 Ga0209025_1004466 3300025294 Bacteria 12149
78 Ga0209564_1000186 3300025295 Bacteria 147120
79 Ga0209564_1000508 3300025295 Bacteria 63967
80 Ga0209758_1000172 3300025297 Bacteria 147763
81 Ga0209758_1000367 3300025297 Bacteria 80207
82 Ga0209758_1006527 3300025297 Bacteria 8326
83 Ga0209050_1000007 3300025298 Bacteria 1187891
84 Ga0209050_1000471 3300025298 Bacteria 71466
85 Ga0209050_1001999 3300025298 Bacteria 19073
86 Ga0209050_1003663 3300025298 Bacteria 11097
87 Ga0209256_1000011 3300025299 Bacteria 865309
88 Ga0209256_1001219 3300025299 Bacteria 28671
89 Ga0207426_1003190 3300025302 Bacteria 9241
90 Ga0209051_1000009 3300025303 Bacteria 706778
91 Ga0209051_1000310 3300025303 Bacteria 76181
92 Ga0209051_1000312 3300025303 Bacteria 75251
93 Ga0209051_1000398 3300025303 Bacteria 60408
94 Ga0209257_1000011 3300025304 Bacteria 1112630
95 Ga0209257_1000165 3300025304 Bacteria 172773
96 Ga0209257_1000508 3300025304 Bacteria 68156
97 Ga0207696_1000163 3300025711 Bacteria 106948
98 Ga0207713_1000020 3300025735 Bacteria 359258
99 Ga0207709_10001201 3300025935 Bacteria 18679
100 Ga0207703_10000279 3300026035 Bacteria 56629
101 Ga0207702_10000487 3300026078 Bacteria 44675
102 Ga0207641_10000005 3300026088 Bacteria 470841
103 Ga0207648_10009254 3300026089 Bacteria 9464
104 Ga0207676_10000788 3300026095 Bacteria 24731
105 Ga0209281_1000084 3300027111 Bacteria 254215
106 Ga0307515_10000347 3300028794 Bacteria 114603
107 Ga0265338_10000390 3300028800 Bacteria 78634
108 Ga0265338_10001874 3300028800 Bacteria 32954
109 Ga0265325_10000199 3300031241 Bacteria 42564
110 Ga0265331_10000190 3300031250 Bacteria 75729
111 Ga0265331_10002034 3300031250 Bacteria 14021
112 Ga0265327_10001685 3300031251 Bacteria 26439
113 Ga0307509_10000172 3300031507 Bacteria 102211
114 Ga0307509_10020405 3300031507 Bacteria 7517
115 Ga0307408_100002071 3300031548 Bacteria 14441
116 Ga0265313_10000129 3300031595 Bacteria 76475
117 Ga0307508_10000842 3300031616 Bacteria 35594
118 Ga0265314_10000359 3300031711 Bacteria 63454
119 Ga0265314_10003164 3300031711 Bacteria 16137
120 Ga0265342_10007024 3300031712 Bacteria 8307
121 Ga0307516_10000114 3300031730 Bacteria 93691
122 Ga0307406_10002446 3300031901 Bacteria 10112
123 Ga0436365_0843075 3300039437 Bacteria 51115
124 Ga0436361_0093500 3300039447 Bacteria 58488
125 Ga0436362_0383697 3300039453 Bacteria 74416
126 Ga0451577_0001005 3300042876 Bacteria 41060
127 Ga0453684_0005822 3300044712 Bacteria 23988
128 Ga0453684_0022744 3300044712 Bacteria 9283
129 Ga0495590_0001203 3300046457 Bacteria 11308
130 Ga0495638_0002473 3300046460 Bacteria 15046
131 Ga0495650_0002648 3300046471 Bacteria 13983
132 Ga0495583_0000018 3300046506 Bacteria 306541
133 Ga0495630_0000043 3300046517 Bacteria 104062
134 Ga0495630_0004704 3300046517 Bacteria 9577
135 Ga0495643_0002008 3300046522 Bacteria 16976
136 Ga0495586_0000077 3300046535 Bacteria 60087
137 Ga0495668_0000136 3300046616 Bacteria 111262
138 Ga0495634_0000540 3300046642 Bacteria 37204
139 Ga0495625_0000572 3300046660 Bacteria 53759
140 Ga0495625_0004889 3300046660 Bacteria 12486
141 Ga0495661_0000043 3300046665 Bacteria 149067
142 Ga0495674_0000046 3300047319 Bacteria 81912
143 Ga0495674_0000579 3300047319 Bacteria 34244
144 Ga0495686_0000051 3300047472 Bacteria 263489
145 Ga0495686_0000817 3300047472 Bacteria 40177
146 Ga0495626_0000066 3300048091 Bacteria 141280
147 Ga0495626_0002279 3300048091 Bacteria 13651
148 Ga0496112_0014802 3300048915 Bacteria 7253
149 Ga0496116_0011190 3300048919 Bacteria 7455
150 Ga0496117_0000205 3300048920 Bacteria 116761
151 Ga0496117_0001874 3300048920 Bacteria 28312
152 Ga0496119_0000140 3300048922 Bacteria 101373
153 Ga0496120_0000011 3300048923 Bacteria 365549
154 Ga0496122_0000144 3300048925 Bacteria 166503
155 Ga0496122_0000253 3300048925 Bacteria 120534
156 Ga0496123_0000206 3300048926 Bacteria 120598
157 Ga0496123_0000311 3300048926 Bacteria 93694
158 Ga0496124_0000148 3300048927 Bacteria 144782
159 Ga0495678_002699 3300049459 Bacteria 11702
160 Ga0501034_0000049 3300049571 Bacteria 213166
161 Ga0501046_0001205 3300049580 Bacteria 25142
162 Ga0501035_0002945 3300049822 Bacteria 16380
163 nmdc:mga05p37_231_c1 3300050507 Bacteria 56731
164 nmdc:mga05p37_4636_c1 3300050507 Bacteria 16078
165 nmdc:mga09592_2444_c1 3300050508 Bacteria 14990
166 Ga0500610_0000609 3300053079 Bacteria 10984
167 Ga0500635_0000029 3300053080 Bacteria 100914
168 Ga0500616_0000141 3300053153 Bacteria 122164
169 Ga0500636_0002531 3300053177 Bacteria 10152

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013297 Ga0157378_10015486 Ga0157378_100154863 1507
2 3300006844 Ga0075428_100004843 Ga0075428_1000048432 1556
3 3300006880 Ga0075429_100016064 Ga0075429_1000160642 1556
4 3300050507 nmdc:mga05p37_4636_c1 nmdc:mga05p37_4636_c1_9432_14948 1562
5 3300009147 Ga0114129_10002238 Ga0114129_1000223815 1564
6 3300049459 Ga0495678_002699 Ga0495678_002699_1604_6754 1582
7 3300053079 Ga0500610_0000609 Ga0500610_0000609_3579_8804 1582
8 3300046517 Ga0495630_0004704 Ga0495630_0004704_1101_6251 1583
9 3300046642 Ga0495634_0000540 Ga0495634_0000540_27363_32513 1583
10 3300047319 Ga0495674_0000579 Ga0495674_0000579_12001_17151 1584
11 iso_pu_bacteria 2643221690 2644505917 1585
12 3300031241 Ga0265325_10000199 Ga0265325_1000019931 1592
13 3300031250 Ga0265331_10000190 Ga0265331_1000019049 1592
14 3300031595 Ga0265313_10000129 Ga0265313_1000012925 1592
15 3300031711 Ga0265314_10000359 Ga0265314_1000035952 1592
16 3300031712 Ga0265342_10007024 Ga0265342_100070243 1592
17 3300031507 Ga0307509_10020405 Ga0307509_100204053 1597
18 3300005530 Ga0070679_100009189 Ga0070679_1000091894 1598
19 3300031507 Ga0307509_10000172 Ga0307509_1000017247 1606
20 3300003791 Ga0055530_10003787 Ga0055530_100037871 1607
21 3300003792 Ga0055540_1002082 Ga0055540_10020825 1607
22 3300003794 Ga0055531_10002960 Ga0055531_100029605 1607
23 3300025292 Ga0209676_1000437 Ga0209676_100043754 1607
24 3300025298 Ga0209050_1003663 Ga0209050_10036632 1607
25 3300025303 Ga0209051_1000312 Ga0209051_10003127 1607
26 3300025304 Ga0209257_1000508 Ga0209257_10005085 1607
27 3300046460 Ga0495638_0002473 Ga0495638_0002473_7980_13190 1609
28 3300009147 Ga0114129_10001384 Ga0114129_100013845 1612
29 3300050507 nmdc:mga05p37_231_c1 nmdc:mga05p37_231_c1_27009_32561 1612
30 3300050508 nmdc:mga09592_2444_c1 nmdc:mga09592_2444_c1_3361_8913 1612
31 iso_pu_bacteria 2643221694 2644524257 1616
32 iso_pu_bacteria 2643221722 2644668355 1616
33 3300003215 JGI25153J46596_10000273 JGI25153J46596_100002738 1624
34 3300025258 Ga0209129_1000113 Ga0209129_100011333 1624
35 3300025295 Ga0209564_1000186 Ga0209564_100018633 1624
36 3300025297 Ga0209758_1000172 Ga0209758_100017233 1624
37 3300053153 Ga0500616_0000141 Ga0500616_0000141_63750_68885 1627
38 3300002773 JGI25152J39213_1002511 JGI25152J39213_10025112 1629
39 3300003215 JGI25153J46596_10005222 JGI25153J46596_100052223 1629
40 3300003781 Ga0055536_1002449 Ga0055536_10024495 1629
41 3300003791 Ga0055530_10002999 Ga0055530_100029992 1629
42 3300003792 Ga0055540_1003661 Ga0055540_10036613 1629
43 3300003794 Ga0055531_10004351 Ga0055531_100043513 1629
44 3300017792 Ga0163161_10000112 Ga0163161_100001125 1629
45 3300025258 Ga0209129_1001891 Ga0209129_10018913 1629
46 3300025291 Ga0209675_1003007 Ga0209675_10030073 1629
47 3300025292 Ga0209676_1000005 Ga0209676_1000005482 1629
48 3300025294 Ga0209025_1004466 Ga0209025_10044663 1629
49 3300025297 Ga0209758_1006527 Ga0209758_10065273 1629
50 3300025298 Ga0209050_1000007 Ga0209050_1000007615 1629
51 3300025298 Ga0209050_1000471 Ga0209050_100047161 1629
52 3300025303 Ga0209051_1000009 Ga0209051_1000009482 1629
53 3300025304 Ga0209257_1000011 Ga0209257_1000011456 1629
54 3300005262 Ga0065165_1005683 Ga0065165_10056833 1630
55 3300025284 Ga0209130_1003342 Ga0209130_10033423 1630
56 3300025302 Ga0207426_1003190 Ga0207426_10031903 1630
57 3300025297 Ga0209758_1000367 Ga0209758_100036759 1632
58 3300044712 Ga0453684_0022744 Ga0453684_0022744_2064_7256 1638
59 3300009148 Ga0105243_10004270 Ga0105243_100042703 1642
60 3300013308 Ga0157375_10000017 Ga0157375_1000001795 1642
61 3300025935 Ga0207709_10001201 Ga0207709_1000120115 1642
62 3300028800 Ga0265338_10000390 Ga0265338_1000039052 1646
63 3300003187 JGI25151J46595_10002534 JGI25151J46595_100025345 1650
64 3300025294 Ga0209025_1001078 Ga0209025_100107815 1650
65 3300003781 Ga0055536_1004260 Ga0055536_10042602 1651
66 3300021358 Ga0213873_10000009 Ga0213873_10000009198 1651
67 3300021384 Ga0213876_10000004 Ga0213876_10000004119 1651
68 3300025292 Ga0209676_1000595 Ga0209676_100059539 1651
69 3300025303 Ga0209051_1000398 Ga0209051_100039859 1651
70 3300039437 Ga0436365_0843075 Ga0436365_0843075_22982_28447 1651
71 3300039453 Ga0436362_0383697 Ga0436362_0383697_9832_15297 1651
72 iso_pu_bacteria 2643221672 2644398514 1653
73 3300046660 Ga0495625_0000572 Ga0495625_0000572_29379_34610 1654
74 3300031730 Ga0307516_10000114 Ga0307516_1000011459 1656
75 3300003187 JGI25151J46595_10000008 JGI25151J46595_10000008243 1660
76 3300025245 Ga0207425_1001573 Ga0207425_10015732 1660
77 3300025294 Ga0209025_1000030 Ga0209025_1000030240 1660
78 iso_pu_bacteria 2643221683 2644468737 1660
79 iso_pu_bacteria 2738541307 2738881631 1660
80 iso_pu_bacteria 2904541872 2904548485 1660
81 iso_pu_bacteria 2929160207 2929163883 1660
82 3300031711 Ga0265314_10003164 Ga0265314_100031641 1661
83 iso_pu_bacteria 2599185214 2599624634 1663
84 iso_pu_bacteria 2599185226 2599672504 1663
85 iso_pu_bacteria 2599185227 2599683504 1663
86 iso_pu_bacteria 2599185229 2599694113 1663
87 iso_pu_bacteria 2928070936 2928070975 1663
88 3300028800 Ga0265338_10001874 Ga0265338_100018744 1665
89 iso_pu_bacteria 2838054893 2838056876 1665
90 iso_pu_bacteria 2643221628 2644163083 1666
91 iso_pu_bacteria 2945909444 2945912593 1666
92 3300048091 Ga0495626_0000066 Ga0495626_0000066_1712_7222 1667
93 iso_pu_bacteria 2945984333 2945985121 1667
94 3300009093 Ga0105240_10001416 Ga0105240_1000141633 1668
95 3300021361 Ga0213872_10000259 Ga0213872_100002598 1669
96 3300039447 Ga0436361_0093500 Ga0436361_0093500_46342_51846 1669
97 3300003751 Ga0055538_1000010 Ga0055538_1000010262 1671
98 3300003752 Ga0055539_1000015 Ga0055539_1000015262 1671
99 3300003756 Ga0055533_1000018 Ga0055533_1000018262 1671
100 3300003759 Ga0055525_1000020 Ga0055525_1000020262 1671
101 3300003841 Ga0055541_1000011 Ga0055541_1000011262 1671
102 3300025224 Ga0209784_100025 Ga0209784_100025259 1671
103 3300025225 Ga0209566_100025 Ga0209566_100025259 1671
104 3300025226 Ga0209674_100042 Ga0209674_100042259 1671
105 3300025230 Ga0209563_100046 Ga0209563_100046259 1671
106 3300025253 Ga0209677_100027 Ga0209677_100027259 1671
107 3300005331 Ga0070670_100003497 Ga0070670_1000034972 1680
108 3300009551 Ga0105238_10009411 Ga0105238_100094113 1683
109 3300006051 Ga0075364_10006151 Ga0075364_100061513 1684
110 3300031250 Ga0265331_10002034 Ga0265331_100020347 1686
111 3300031251 Ga0265327_10001685 Ga0265327_100016855 1686
112 3300005618 Ga0068864_100001044 Ga0068864_1000010449 1691
113 3300005841 Ga0068863_100000019 Ga0068863_100000019173 1691
114 3300005842 Ga0068858_100000040 Ga0068858_10000004068 1691
115 3300026035 Ga0207703_10000279 Ga0207703_1000027933 1691
116 3300026088 Ga0207641_10000005 Ga0207641_1000000549 1691
117 3300026095 Ga0207676_10000788 Ga0207676_100007889 1691
118 3300005577 Ga0068857_100002372 Ga0068857_10000237210 1692
119 3300006028 Ga0070717_10000035 Ga0070717_1000003553 1692
120 3300025294 Ga0209025_1001215 Ga0209025_100121526 1692
121 3300048915 Ga0496112_0014802 Ga0496112_0014802_1616_7099 1693
122 3300048919 Ga0496116_0011190 Ga0496116_0011190_1633_7116 1693
123 3300048925 Ga0496122_0000144 Ga0496122_0000144_100986_106451 1695
124 3300048926 Ga0496123_0000311 Ga0496123_0000311_82979_88444 1695
125 3300048925 Ga0496122_0000253 Ga0496122_0000253_55119_60602 1698
126 3300048926 Ga0496123_0000206 Ga0496123_0000206_59933_65416 1698
127 3300048927 Ga0496124_0000148 Ga0496124_0000148_102768_108251 1698
128 3300031901 Ga0307406_10002446 Ga0307406_100024465 1700
129 3300047472 Ga0495686_0000051 Ga0495686_0000051_48770_54238 1703
130 3300049571 Ga0501034_0000049 Ga0501034_0000049_26845_32415 1704
131 iso_pu_bacteria 2786546940 2788432826 1706
132 3300028794 Ga0307515_10000347 Ga0307515_1000034780 1707
133 3300046471 Ga0495650_0002648 Ga0495650_0002648_5754_11198 1708
134 3300014326 Ga0157380_10005495 Ga0157380_100054955 1711
135 3300026089 Ga0207648_10009254 Ga0207648_100092545 1711
136 3300009011 Ga0105251_10000020 Ga0105251_10000020118 1712
137 3300053080 Ga0500635_0000029 Ga0500635_0000029_63872_69442 1713
138 3300046457 Ga0495590_0001203 Ga0495590_0001203_4936_10398 1714
139 3300025735 Ga0207713_1000020 Ga0207713_100002036 1715
140 3300006028 Ga0070717_10000131 Ga0070717_1000013115 1717
141 3300026078 Ga0207702_10000487 Ga0207702_1000048728 1718
142 3300048920 Ga0496117_0000205 Ga0496117_0000205_60519_65975 1718
143 3300048920 Ga0496117_0001874 Ga0496117_0001874_1798_7281 1718
144 3300048922 Ga0496119_0000140 Ga0496119_0000140_36400_41883 1718
145 3300048923 Ga0496120_0000011 Ga0496120_0000011_153530_159013 1718
146 3300009011 Ga0105251_10000041 Ga0105251_1000004154 1720
147 3300046517 Ga0495630_0000043 Ga0495630_0000043_64354_70185 1720
148 3300046535 Ga0495586_0000077 Ga0495586_0000077_33894_39725 1720
149 3300047319 Ga0495674_0000046 Ga0495674_0000046_69306_75137 1720
150 3300049580 Ga0501046_0001205 Ga0501046_0001205_10076_15598 1720
151 3300005617 Ga0068859_100008347 Ga0068859_1000083475 1721
152 3300006931 Ga0097620_100008347 Ga0097620_1000083475 1721
153 3300049822 Ga0501035_0002945 Ga0501035_0002945_379_5901 1724
154 3300053177 Ga0500636_0002531 Ga0500636_0002531_3792_9338 1726
155 3300042876 Ga0451577_0001005 Ga0451577_0001005_19150_24684 1728
156 3300044712 Ga0453684_0005822 Ga0453684_0005822_11846_17380 1728
157 3300047472 Ga0495686_0000817 Ga0495686_0000817_26150_31642 1728
158 3300046665 Ga0495661_0000043 Ga0495661_0000043_65073_70535 1729
159 3300046660 Ga0495625_0004889 Ga0495625_0004889_1992_7544 1730
160 3300003775 Ga0055524_1000079 Ga0055524_100007924 1732
161 3300025299 Ga0209256_1000011 Ga0209256_100001125 1732
162 3300031548 Ga0307408_100002071 Ga0307408_1000020716 1733
163 3300006946 Ga0079104_1000100 Ga0079104_100010047 1734
164 3300027111 Ga0209281_1000084 Ga0209281_100008462 1734
165 3300046506 Ga0495583_0000018 Ga0495583_0000018_73069_78621 1734
166 3300025253 Ga0209677_100300 Ga0209677_1003008 1735
167 3300009092 Ga0105250_10000109 Ga0105250_1000010935 1737
168 3300025711 Ga0207696_1000163 Ga0207696_100016334 1740
169 3300003794 Ga0055531_10000205 Ga0055531_1000020535 1743
170 3300025303 Ga0209051_1000310 Ga0209051_100031072 1743
171 3300025304 Ga0209257_1000165 Ga0209257_1000165123 1743
172 3300031616 Ga0307508_10000842 Ga0307508_100008425 1743
173 iso_pu_bacteria 2739367664 2739652284 1743
174 iso_pu_bacteria 2739367865 2740030758 1743
175 iso_pu_bacteria 2643221638 2644216152 1752
176 iso_pu_bacteria 2987605356 2987605497 1753
177 iso_pu_bacteria 8021120328 8021126401 1755
178 3300046616 Ga0495668_0000136 Ga0495668_0000136_8052_13526 1758
179 3300046522 Ga0495643_0002008 Ga0495643_0002008_4205_9685 1759
180 3300048091 Ga0495626_0002279 Ga0495626_0002279_6225_11705 1759
181 3300002739 JGI25158J39367_1000591 JGI25158J39367_10005912 1761
182 3300003374 JGI25161J50226_1000711 JGI25161J50226_10007114 1761
183 3300003771 Ga0055526_1003416 Ga0055526_10034163 1761
184 3300003791 Ga0055530_10003013 Ga0055530_100030132 1761
185 3300004625 Ga0055543_1000975 Ga0055543_10009757 1761
186 3300005262 Ga0065165_1003006 Ga0065165_10030067 1761
187 3300025208 Ga0209436_100785 Ga0209436_1007858 1761
188 3300025284 Ga0209130_1000836 Ga0209130_100083612 1761
189 3300025291 Ga0209675_1002358 Ga0209675_10023582 1761
190 3300025295 Ga0209564_1000508 Ga0209564_100050847 1761
191 3300025298 Ga0209050_1001999 Ga0209050_10019997 1761
192 3300025299 Ga0209256_1001219 Ga0209256_10012197 1761

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18741

MTES_1575

REase_MTES_1575

1638

1733

0.95

PF05406

WGR

WGR domain

1796

1865

0.93

PF13086

AAA_11

AAA domain

645

976

0.79

PF13086

AAA_11

AAA domain

1148

1333

0.78

PF13087

AAA_12

AAA domain

1357

1581

0.77

PF13195

DUF4011

Protein of unknown function (DUF4011)

254

409

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ra8-assembly1.cif.gz_A crystal structure of the q64v53_bacfr protein from bacteroides fragilis. northeast structural genomics consortium target bfr43 0.9598 1694 1761
4ozx-assembly1.cif.gz_A crystal structure of the alginate lyase from klebsiella pneumoniae 0.8163 1704 1737
7w12-assembly1.cif.gz_A complex structure of alginate lyase alyb-ou02 with g9 0.7993 1705 1739
5zu5-assembly1.cif.gz_A crystal structure of a full length alginate lyase with cbm domain 0.799 1705 1739
3v5j-assembly1.cif.gz_A crystal structure of interleukin-2 inducible t-cell kinase itk catalytic domain with thienopyrazolylindole inhibitor 090 0.7218 8 223
ID Description Score Start End Superfamily
af_P33345_1_72_2.20.140.10 Mainly Beta;Single Sheet;q64v53_bacfr protein fold;WGR domain 0.9785 1696 1761 2.20.140.10
af_P78271_1_70_2.20.140.10 Mainly Beta;Single Sheet;q64v53_bacfr protein fold;WGR domain 0.9679 1694 1761 2.20.140.10
af_P78271_1_70_2.20.140.10 Mainly Beta;Single Sheet;q64v53_bacfr protein fold;WGR domain 0.9282 1694 1761 2.20.140.10
af_Q54HY5_254_335_3.10.20.10 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9215 1694 1761 3.10.20.10
af_P33345_1_72_2.20.140.10 Mainly Beta;Single Sheet;q64v53_bacfr protein fold;WGR domain 0.8866 1696 1761 2.20.140.10
ID Description Score Start End GO Terms
AF-A0A238U5N7-F1-model_v4 WGR domain-containing protein 0.9978 1694 1761
AF-E3B9F4-F1-model_v4 deleted 0.9925 1694 1761
AF-A0A2S9YAQ6-F1-model_v4 WGR domain protein 0.9914 1694 1761
AF-A0A2P1QVB4-F1-model_v4 Leucine rich repeat protein 0.99 1694 1761
AF-A0A855U166-F1-model_v4 deleted 0.9884 1693 1761

Feature Viewer

pLDDT pTM Quality
81.53 0.57 Medium
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Predicted Structure (AlphaFold2)

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