F294452

General Info

Members Datasets Scaffolds Average Seq Length
191 154 382 476

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0035933|Ga0466963_0035933_1289_2857
Length 522
Sequence MRDTEVEATPGWGAVGKFAARLRRFTNAILLSSRRPAATVGSLYKKESVVKRGEGMTTETGALAAASAEQWRDRKRHLWPIGLVVPSLAFAAIGLHAATGWGVWFWIGPIVILVVVPVIDLVTGLDPANPPDEAIEALEKDRYYRWITYAFLPIQYAGFLVAFYLLARGQLTVIDKIGLAVSVGCIGGIGINTAHELGHKKESHERWLSKIALAQSFYGHFFIEHNRGHHVRVATPEDPASSRLGESFYRFWPRTVLGSLRSAWALERKRYGRRGQHPFRLGNDVLNAWLMSAVLWAALVAWLGVGILPYLLIQAVIGFSLLEIVNYMEHYGMLRQKIGPPDRRRYERVSPAHSWNSNNVATNVLLYHLQRHSDHHANPTRRYQTLRDFAESPVLPTGYAGMIVLALFPPLWRAVMDRRVLEHFNGDISRANITPGRRPALLARYGTGRATSGPADGADRRGDAVGGGMCPGCGYTYDEANGDPREGFPAGTAWADIPDTWCCPDCGVREKVDFVAPEKVSK

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
54 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
66 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
67 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
68 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
69 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
70 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
85 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
102 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
109 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
110 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
111 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
112 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
113 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
117 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
118 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
119 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
125 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
126 2643221561 Nocardioides sp. Root151 Isolate Unclassified
127 2643221576 Nocardioides sp. Root614 Isolate Unclassified
128 2643221590 Nocardioides sp. Root682 Isolate Unclassified
129 2643221604 Nocardioides sp. Root190 Isolate Unclassified
130 2643221615 Nocardioides sp. Root224 Isolate Unclassified
131 2643221617 Nocardioides sp. Root79 Isolate Unclassified
132 2643221620 Nocardioides sp. Root240 Isolate Unclassified
133 2643221641 Nocardioides sp. Root122 Isolate Unclassified
134 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
135 2643221696 Nocardioides sp. Root140 Isolate Unclassified
136 2738541305 Nocardioides sp. CF167 Isolate Unclassified
137 2739367898 Nocardioides sp. CF479 Isolate Unclassified
138 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
139 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
140 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
141 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
142 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
143 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
144 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
145 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
146 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
147 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
148 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
149 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
150 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
151 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
152 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
153 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
154 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.58
Metatranscriptomes 1.05
Isolates 19.37

Biome Distribution

Category Percentage (%)
Aerial Root 1.05
Bulb 0
Endosphere 9.95
Nodule 0.52
Rhizoplane 5.24
Rhizosphere 61.26
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0035933 3300044694 Bacteria 3229
2 Ga0006562J51391_1006620 3300003578 Bacteria 2304
3 Ga0070658_10050657 3300005327 Bacteria 3366
4 Ga0070683_100004428 3300005329 Bacteria 11579
5 Ga0070683_100067284 3300005329 Bacteria 3337
6 Ga0070660_100050742 3300005339 Bacteria 3193
7 Ga0070675_100244385 3300005354 Bacteria 1569
8 Ga0070714_100163845 3300005435 Bacteria 2013
9 Ga0070710_10000154 3300005437 Bacteria 32143
10 Ga0070663_100046428 3300005455 Bacteria 3073
11 Ga0070662_100089360 3300005457 Bacteria 2311
12 Ga0070685_10090953 3300005466 Bacteria 1847
13 Ga0070707_100053384 3300005468 Bacteria 3875
14 Ga0070698_100001488 3300005471 Bacteria 26030
15 Ga0070684_100010497 3300005535 Bacteria 7339
16 Ga0070684_100071294 3300005535 Bacteria 3058
17 Ga0070672_100006230 3300005543 Bacteria 7992
18 Ga0070696_100162558 3300005546 Bacteria 1646
19 Ga0070665_100001727 3300005548 Bacteria 24986
20 Ga0070702_100012643 3300005615 Bacteria 4237
21 Ga0068852_100006775 3300005616 Bacteria 8313
22 Ga0068860_100000504 3300005843 Bacteria 48482
23 Ga0081539_10017323 3300005985 Bacteria 5066
24 Ga0075365_10013039 3300006038 Bacteria 4958
25 Ga0075368_10014211 3300006042 Bacteria 2937
26 Ga0075363_100014681 3300006048 Bacteria 3835
27 Ga0075364_10028899 3300006051 Bacteria 3552
28 Ga0075367_10002397 3300006178 Bacteria 8551
29 Ga0075367_10007389 3300006178 Bacteria 5622
30 Ga0075370_10004240 3300006353 Bacteria 6936
31 Ga0075370_10008963 3300006353 Bacteria 5173
32 Ga0075370_10082795 3300006353 Bacteria 1845
33 Ga0105245_10003886 3300009098 Bacteria 13287
34 Ga0105243_10003788 3300009148 Bacteria 12102
35 Ga0105239_10007524 3300010375 Bacteria 12489
36 Ga0105246_10027488 3300011119 Bacteria 3728
37 Ga0163162_10024383 3300013306 Bacteria 5970
38 Ga0157372_10030438 3300013307 Bacteria 5906
39 Ga0157375_10016461 3300013308 Bacteria 6645
40 Ga0163163_10028312 3300014325 Bacteria 5378
41 Ga0157379_10006377 3300014968 Bacteria 10159
42 Ga0207692_10002688 3300025898 Bacteria 6845
43 Ga0207642_10045692 3300025899 Bacteria 1946
44 Ga0207643_10013864 3300025908 Bacteria 4372
45 Ga0207705_10118217 3300025909 Bacteria 1964
46 Ga0207657_10101228 3300025919 Bacteria 2391
47 Ga0207652_10025503 3300025921 Bacteria 4916
48 Ga0207687_10028592 3300025927 Bacteria 3745
49 Ga0207706_10122939 3300025933 Bacteria 2283
50 Ga0207709_10044299 3300025935 Bacteria 2687
51 Ga0207691_10012894 3300025940 Bacteria 8003
52 Ga0207661_10241411 3300025944 Bacteria 1603
53 Ga0207658_10087844 3300025986 Bacteria 2402
54 Ga0207708_10000193 3300026075 Bacteria 48084
55 Ga0207648_10004894 3300026089 Bacteria 13652
56 Ga0207674_10007052 3300026116 Bacteria 13137
57 Ga0268264_10000547 3300028381 Bacteria 47223
58 Ga0268264_10039687 3300028381 Bacteria 3890
59 Ga0316181_1088643 3300030744 Bacteria 2763
60 Ga0316182_1373271 3300030745 Bacteria 12303
61 Ga0307513_10001992 3300031456 Bacteria 28903
62 Ga0307508_10194470 3300031616 Bacteria 1630
63 Ga0307518_10000723 3300031838 Bacteria 24815
64 Ga0307518_10013615 3300031838 Bacteria 5812
65 Ga0307410_10060594 3300031852 Bacteria 2587
66 Ga0307410_10121752 3300031852 Bacteria 1904
67 Ga0307409_100042524 3300031995 Bacteria 3404
68 Ga0307409_100114581 3300031995 Bacteria 2268
69 Ga0307416_100042425 3300032002 Bacteria 3551
70 Ga0307415_100046051 3300032126 Bacteria 2928
71 Ga0316574_0005324 3300035398 Bacteria 6855
72 Ga0395900_0080008 3300037418 Bacteria 3358
73 Ga0395901_0013021 3300038443 Bacteria 8441
74 Ga0439438_008155 3300041405 Bacteria 3504
75 Ga0439465_0037688 3300041413 Bacteria 1555
76 Ga0451833_0016234 3300041491 Bacteria 3277
77 Ga0451837_1056394 3300041494 Bacteria 7231
78 Ga0451839_1012757 3300041496 Bacteria 5165
79 Ga0439434_0010595 3300042435 Bacteria 2718
80 Ga0466972_0000627 3300044658 Bacteria 17118
81 Ga0466965_0036537 3300044683 Bacteria 2410
82 Ga0466961_0015967 3300044693 Bacteria 4820
83 Ga0466961_0039376 3300044693 Bacteria 3030
84 Ga0466963_0042877 3300044694 Bacteria 2972
85 Ga0466964_0015595 3300044706 Bacteria 2893
86 Ga0466971_0004946 3300044719 Bacteria 5765
87 Ga0466971_0015015 3300044719 Bacteria 3407
88 Ga0466970_0005220 3300044765 Bacteria 6428
89 Ga0466970_0012507 3300044765 Bacteria 4342
90 Ga0466970_0017873 3300044765 Bacteria 3667
91 Ga0466960_0002867 3300044901 Bacteria 6538
92 Ga0466960_0030615 3300044901 Bacteria 2478
93 Ga0466967_0227155 3300045976 Bacteria 1776
94 Ga0496101_0128966 3300048904 Bacteria 1919
95 Ga0496102_0020509 3300048905 Bacteria 5840
96 Ga0496102_0025503 3300048905 Bacteria 5263
97 Ga0496102_0232257 3300048905 Bacteria 1739
98 Ga0496105_0000226 3300048908 Bacteria 37984
99 Ga0496109_0001917 3300048912 Bacteria 17273
100 Ga0496109_0084657 3300048912 Bacteria 2926
101 Ga0496111_0002615 3300048914 Bacteria 10911
102 Ga0496114_0036255 3300048917 Bacteria 4076
103 Ga0496115_0001062 3300048918 Bacteria 19909
104 Ga0501031_0015222 3300049568 Bacteria 4994
105 Ga0501031_0097456 3300049568 Bacteria 1919
106 Ga0501033_0011012 3300049570 Bacteria 6927
107 Ga0501034_0045476 3300049571 Bacteria 4436
108 Ga0501038_0006244 3300049574 Bacteria 11014
109 Ga0501039_0009167 3300049575 Bacteria 7540
110 Ga0501039_0123450 3300049575 Bacteria 2030
111 Ga0501042_0011460 3300049578 Bacteria 5984
112 Ga0501043_0065365 3300049579 Bacteria 2856
113 Ga0501046_0000737 3300049580 Bacteria 31648
114 Ga0501046_0004493 3300049580 Bacteria 12643
115 Ga0501047_0008145 3300049581 Bacteria 9892
116 Ga0501048_0002641 3300049582 Bacteria 13700
117 Ga0501048_0002929 3300049582 Bacteria 13044
118 Ga0501067_0000214 3300049583 Bacteria 32127
119 Ga0501067_0002645 3300049583 Bacteria 9921
120 Ga0501068_0007788 3300049584 Bacteria 5933
121 Ga0501070_0005522 3300049586 Bacteria 10783
122 Ga0501070_0108887 3300049586 Bacteria 2289
123 Ga0501071_0005919 3300049587 Bacteria 7912
124 Ga0501071_0122958 3300049587 Bacteria 1924
125 Ga0501072_0007312 3300049588 Bacteria 8375
126 Ga0501072_0019850 3300049588 Bacteria 5200
127 Ga0501073_0000962 3300049589 Bacteria 20736
128 Ga0501073_0005807 3300049589 Bacteria 9220
129 Ga0501074_0000209 3300049590 Bacteria 32209
130 Ga0501074_0029965 3300049590 Bacteria 3943
131 Ga0501076_0002751 3300049592 Bacteria 12178
132 Ga0501077_0002278 3300049593 Bacteria 11562
133 Ga0501077_0079806 3300049593 Bacteria 2073
134 Ga0501080_0034277 3300049742 Bacteria 4738
135 Ga0501081_0005529 3300049743 Bacteria 8156
136 Ga0501083_0008253 3300049744 Bacteria 7363
137 Ga0501083_0033886 3300049744 Bacteria 3494
138 Ga0501045_0095876 3300049824 Bacteria 2195
139 nmdc:mga03n38_5991_c1 3300050490 Bacteria 4190
140 nmdc:mga00v17_28798_c1 3300050491 Bacteria 3256
141 nmdc:mga0yw44_16253_c1 3300050492 Bacteria 4016
142 nmdc:mga0yw44_16319_c1 3300050492 Bacteria 4008
143 nmdc:mga06z11_74520_c1 3300050494 Bacteria 1805
144 nmdc:mga04h51_10534_c1 3300050495 Bacteria 2542
145 nmdc:mga08y16_67800_c1 3300050511 Bacteria 3722
146 Ga0495619_0023288 3300053085 Bacteria 3969
147 Ga0500644_0000034 3300053088 Bacteria 83176
148 Ga0500556_0000444 3300053104 Bacteria 29431
149 Ga0500593_000216 3300053117 Bacteria 23737
150 Ga0500573_0000504 3300053140 Bacteria 16860
151 Ga0501084_0007616 3300054114 Bacteria 8927
152 Ga0587088_003260 3300059508 Bacteria 1948
153 Ga0501082_0014977 3300060353 Bacteria 6682
154 Ga0466962_0004282 3300061719 Bacteria 6837
155 2558907897 2558860112 Bacteria 9931328
156 2586059848 2585427649 Bacteria 9053857
157 2586060827 2585427649 Bacteria 9053857
158 2643825157 2643221561 Bacteria 4984412
159 2643893659 2643221576 Bacteria 5214352
160 2643961990 2643221590 Bacteria 5214697
161 2644034887 2643221604 Bacteria 5014917
162 2644092213 2643221615 Bacteria 5487866
163 2644101017 2643221617 Bacteria 5139111
164 2644117898 2643221620 Bacteria 5134593
165 2644231809 2643221641 Bacteria 4490190
166 2644322016 2643221657 Bacteria 5490246
167 2644534539 2643221696 Bacteria 5431823
168 2738868612 2738541305 Bacteria 4910150
169 2740168808 2739367898 Bacteria 4367674
170 2774393020 2773857762 Bacteria 5971770
171 2774395317 2773857762 Bacteria 5971770
172 2809193849 2808606439 Bacteria 5952208
173 2809196826 2808606439 Bacteria 5952208
174 2809590176 2808606522 Bacteria 9488490
175 2812330054 2811994874 Bacteria 5367947
176 2812348587 2811994878 Bacteria 5992952
177 2812351022 2811994878 Bacteria 5992952
178 2812374793 2811994882 Bacteria 4688362
179 2855390357 2855386786 Bacteria 4752232
180 2857483398 2857481737 Bacteria 4761446
181 2870786922 2870782633 Bacteria 9624083
182 2891971391 2891968417 Bacteria 5821697
183 2891973679 2891968417 Bacteria 5821697
184 2915769925 2915768154 Bacteria 8424322
185 2917739623 2917736166 Bacteria 9690793
186 2917739895 2917736166 Bacteria 9690793
187 2984578000 2984576629 Bacteria 4248407
188 2990257514 2990256926 Bacteria 4252839
189 8003318236 8003314358 Bacteria 10575343
190 8047710443 8047710418 Bacteria 11023148
191 8054611726 8054609563 Bacteria 5170090
192 Ga0466963_0035933
193 Ga0006562J51391_1006620
194 Ga0070658_10050657
195 Ga0070683_100004428
196 Ga0070683_100067284
197 Ga0070660_100050742
198 Ga0070675_100244385
199 Ga0070714_100163845
200 Ga0070710_10000154
201 Ga0070663_100046428
202 Ga0070662_100089360
203 Ga0070685_10090953
204 Ga0070707_100053384
205 Ga0070698_100001488
206 Ga0070684_100010497
207 Ga0070684_100071294
208 Ga0070672_100006230
209 Ga0070696_100162558
210 Ga0070665_100001727
211 Ga0070702_100012643
212 Ga0068852_100006775
213 Ga0068860_100000504
214 Ga0081539_10017323
215 Ga0075365_10013039
216 Ga0075368_10014211
217 Ga0075363_100014681
218 Ga0075364_10028899
219 Ga0075367_10002397
220 Ga0075367_10007389
221 Ga0075370_10004240
222 Ga0075370_10008963
223 Ga0075370_10082795
224 Ga0105245_10003886
225 Ga0105243_10003788
226 Ga0105239_10007524
227 Ga0105246_10027488
228 Ga0163162_10024383
229 Ga0157372_10030438
230 Ga0157375_10016461
231 Ga0163163_10028312
232 Ga0157379_10006377
233 Ga0207692_10002688
234 Ga0207642_10045692
235 Ga0207643_10013864
236 Ga0207705_10118217
237 Ga0207657_10101228
238 Ga0207652_10025503
239 Ga0207687_10028592
240 Ga0207706_10122939
241 Ga0207709_10044299
242 Ga0207691_10012894
243 Ga0207661_10241411
244 Ga0207658_10087844
245 Ga0207708_10000193
246 Ga0207648_10004894
247 Ga0207674_10007052
248 Ga0268264_10000547
249 Ga0268264_10039687
250 Ga0316181_1088643
251 Ga0316182_1373271
252 Ga0307513_10001992
253 Ga0307508_10194470
254 Ga0307518_10000723
255 Ga0307518_10013615
256 Ga0307410_10060594
257 Ga0307410_10121752
258 Ga0307409_100042524
259 Ga0307409_100114581
260 Ga0307416_100042425
261 Ga0307415_100046051
262 Ga0316574_0005324
263 Ga0395900_0080008
264 Ga0395901_0013021
265 Ga0439438_008155
266 Ga0439465_0037688
267 Ga0451833_0016234
268 Ga0451837_1056394
269 Ga0451839_1012757
270 Ga0439434_0010595
271 Ga0466972_0000627
272 Ga0466965_0036537
273 Ga0466961_0015967
274 Ga0466961_0039376
275 Ga0466963_0042877
276 Ga0466964_0015595
277 Ga0466971_0004946
278 Ga0466971_0015015
279 Ga0466970_0005220
280 Ga0466970_0012507
281 Ga0466970_0017873
282 Ga0466960_0002867
283 Ga0466960_0030615
284 Ga0466967_0227155
285 Ga0496101_0128966
286 Ga0496102_0020509
287 Ga0496102_0025503
288 Ga0496102_0232257
289 Ga0496105_0000226
290 Ga0496109_0001917
291 Ga0496109_0084657
292 Ga0496111_0002615
293 Ga0496114_0036255
294 Ga0496115_0001062
295 Ga0501031_0015222
296 Ga0501031_0097456
297 Ga0501033_0011012
298 Ga0501034_0045476
299 Ga0501038_0006244
300 Ga0501039_0009167
301 Ga0501039_0123450
302 Ga0501042_0011460
303 Ga0501043_0065365
304 Ga0501046_0000737
305 Ga0501046_0004493
306 Ga0501047_0008145
307 Ga0501048_0002641
308 Ga0501048_0002929
309 Ga0501067_0000214
310 Ga0501067_0002645
311 Ga0501068_0007788
312 Ga0501070_0005522
313 Ga0501070_0108887
314 Ga0501071_0005919
315 Ga0501071_0122958
316 Ga0501072_0007312
317 Ga0501072_0019850
318 Ga0501073_0000962
319 Ga0501073_0005807
320 Ga0501074_0000209
321 Ga0501074_0029965
322 Ga0501076_0002751
323 Ga0501077_0002278
324 Ga0501077_0079806
325 Ga0501080_0034277
326 Ga0501081_0005529
327 Ga0501083_0008253
328 Ga0501083_0033886
329 Ga0501045_0095876
330 nmdc:mga03n38_5991_c1
331 nmdc:mga00v17_28798_c1
332 nmdc:mga0yw44_16253_c1
333 nmdc:mga0yw44_16319_c1
334 nmdc:mga06z11_74520_c1
335 nmdc:mga04h51_10534_c1
336 nmdc:mga08y16_67800_c1
337 Ga0495619_0023288
338 Ga0500644_0000034
339 Ga0500556_0000444
340 Ga0500593_000216
341 Ga0500573_0000504
342 Ga0501084_0007616
343 Ga0587088_003260
344 Ga0501082_0014977
345 Ga0466962_0004282
346 2558907897
347 2586059848
348 2586060827
349 2643825157
350 2643893659
351 2643961990
352 2644034887
353 2644092213
354 2644101017
355 2644117898
356 2644231809
357 2644322016
358 2644534539
359 2738868612
360 2740168808
361 2774393020
362 2774395317
363 2809193849
364 2809196826
365 2809590176
366 2812330054
367 2812348587
368 2812351022
369 2812374793
370 2855390357
371 2857483398
372 2870786922
373 2891971391
374 2891973679
375 2915769925
376 2917739623
377 2917739895
378 2984578000
379 2990257514
380 8003318236
381 8047710443
382 8054611726

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00301

Rubredoxin

Rubredoxin

468

514

0.93

PF00487

FA_desaturase

Fatty acid desaturase

176

406

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yk5-assembly1.cif.gz_A pyrococcus abyssi rubredoxin 0.9409 425 476
8f6t-assembly1.cif.gz_A cryo-em structure of alkane 1-monooxygenase alkb-alkg complex from fontimonas thermophila 0.9335 16 477
8f6t-assembly1.cif.gz_A cryo-em structure of alkane 1-monooxygenase alkb-alkg complex from fontimonas thermophila 0.9314 16 477
1iu6-assembly1.cif.gz_A neutron crystal structure of the rubredoxin mutant from pyrococcus furiosus 0.9283 425 475
2v3b-assembly1.cif.gz_B crystal structure of the electron transfer complex rubredoxin - rubredoxin reductase from pseudomonas aeruginosa. 0.926 425 476
ID Description Score Start End Superfamily
5xpdA02 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.9291 425 475 2.20.28.10
1r0hA00 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.9108 425 476 2.20.28.10
af_Q46877_423_479_2.20.28.10 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.8813 425 477 2.20.28.10
1r0hA00 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.8647 425 476 2.20.28.10
af_Q58150_1_54_2.20.28.10 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.8547 418 475 2.20.28.10
ID Description Score Start End GO Terms
AF-A0A522QI07-F1-model_v4 Rubredoxin 1.007 425 475 GO:0005506
GO:0009055
GO:0043448
AF-Q9WWW4-F1-model_v4 Rubredoxin-1 (Rdxs) 0.9999 425 476 GO:0005506
GO:0005737
GO:0009055
GO:0043448
AF-A0A7T4QZ40-F1-model_v4 Rubredoxin 0.9863 425 477 GO:0005506
GO:0009055
GO:0043448
AF-A0A2N3WWJ3-F1-model_v4 Rubredoxin 0.9849 425 477 GO:0005506
GO:0009055
GO:0043448
AF-A0A519YXA2-F1-model_v4 Rubredoxin 0.9834 425 477 GO:0005506
GO:0009055
GO:0043448

Map