F291292

General Info

Members Datasets Scaffolds Average Seq Length
189 115 378 350

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0058218|Ga0436363_0058218_3314_4525
Length 403
Sequence MAPSPTVSLTDTAANLPWSTGQTPKARPADLGYRMPAEWEPHDATWLAWPHNRSDWPGKFEPVPWVYAEIIRHLSRVERVEILVNDAAEEKQARGVLKSAGVSTADVNFHRIKTNRSWTRDFVPMFVRMDGIVLHGRDVAAHLGVEEVPDQFRLGMVKWRFNGWAKYKDWRQDEAAAKTVVEKLALPTWFPAVQQEKREVQVVLEGGAIDVNGLGALLTTEECLLSESQQQRNPGIRREQMESFLAAYLGARHVIWLNRGIAGDDTHGHIDDVARFVAPDTVVTSVEWNPADSNHEALNENLKILRAAKDQDGRPLRVVELPMPAPVFFRGQRLPASYANFYIANRLVLVPTFNDPNDRRVLEILAELFPERQIIGIYCGDLVLGLGTLHCMTQQQPRAEYCG

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
15 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
16 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
28 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
29 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
44 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
45 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
48 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
49 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
50 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
64 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
85 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
97 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
115 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.7
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_0058218 3300039450 Bacteria 6884
2 Ga0070658_10040777 3300005327 Unclassified 3746
3 Ga0070680_100035636 3300005336 Bacteria 4018
4 Ga0070680_100119277 3300005336 Bacteria 2201
5 Ga0070709_10141777 3300005434 Bacteria 1652
6 Ga0070681_10028034 3300005458 Bacteria 5661
7 Ga0068867_100189575 3300005459 Bacteria 1640
8 Ga0070707_100000051 3300005468 Bacteria 101921
9 Ga0070707_100219303 3300005468 Bacteria 1853
10 Ga0070707_100304133 3300005468 Unclassified 1550
11 Ga0070679_100049844 3300005530 Bacteria 4171
12 Ga0070697_100024636 3300005536 Bacteria 4793
13 Ga0068855_100214310 3300005563 Bacteria 2162
14 Ga0068855_100241563 3300005563 Bacteria 2018
15 Ga0068855_100305995 3300005563 Bacteria 1759
16 Ga0068857_100089016 3300005577 Bacteria 2762
17 Ga0068858_100077522 3300005842 Bacteria 3087
18 Ga0070712_100084418 3300006175 Bacteria 2309
19 Ga0075436_100008888 3300006914 Bacteria 6873
20 Ga0099794_10005072 3300007265 Bacteria 5249
21 Ga0099795_10005982 3300007788 Bacteria 3283
22 Ga0105240_10078946 3300009093 Bacteria 4052
23 Ga0105240_10627543 3300009093 Bacteria 1180
24 Ga0105245_10031281 3300009098 Bacteria 4709
25 Ga0105247_10206751 3300009101 Bacteria 1322
26 Ga0105241_10069307 3300009174 Unclassified 2734
27 Ga0105248_10028645 3300009177 Bacteria 6206
28 Ga0105238_10040398 3300009551 Bacteria 4727
29 Ga0105239_10095758 3300010375 Bacteria 3279
30 Ga0157374_10038641 3300013296 Bacteria 4388
31 Ga0157374_10042504 3300013296 Bacteria 4193
32 Ga0157374_10170337 3300013296 Unclassified 2124
33 Ga0157378_10071492 3300013297 Bacteria 3116
34 Ga0157378_10183648 3300013297 Bacteria 1969
35 Ga0163162_10110198 3300013306 Bacteria 2850
36 Ga0163162_10196634 3300013306 Bacteria 2145
37 Ga0157376_10000037 3300014969 Bacteria 138129
38 Ga0157376_10004873 3300014969 Bacteria 9355
39 Ga0182007_10003044 3300015262 Bacteria 8089
40 Ga0207699_10124519 3300025906 Bacteria 1672
41 Ga0207695_10180580 3300025913 Bacteria 2031
42 Ga0207663_10042946 3300025916 Bacteria 2765
43 Ga0207660_10025911 3300025917 Bacteria 3987
44 Ga0207660_10209611 3300025917 Bacteria 1525
45 Ga0207657_10000197 3300025919 Bacteria 62537
46 Ga0207646_10000016 3300025922 Bacteria 337048
47 Ga0207646_10176307 3300025922 Bacteria 1931
48 Ga0207650_10159091 3300025925 Bacteria 1788
49 Ga0207687_10010266 3300025927 Bacteria 6118
50 Ga0207706_10033945 3300025933 Bacteria 4541
51 Ga0207711_10019316 3300025941 Bacteria 5675
52 Ga0207703_10083352 3300026035 Bacteria 2671
53 Ga0207678_10133127 3300026067 Bacteria 2121
54 Ga0207641_10008733 3300026088 Bacteria 8370
55 Ga0207674_10012876 3300026116 Bacteria 9332
56 Ga0265319_1001893 3300028563 Bacteria 11884
57 Ga0265318_10000482 3300028577 Bacteria 29443
58 Ga0265336_10015875 3300028666 Bacteria 2469
59 Ga0265338_10006303 3300028800 Bacteria 15169
60 Ga0265338_10061358 3300028800 Bacteria 3295
61 Ga0265338_10144353 3300028800 Bacteria 1859
62 Ga0265338_10355167 3300028800 Unclassified 1053
63 Ga0265320_10002844 3300031240 Bacteria 11872
64 Ga0265325_10012870 3300031241 Bacteria 4773
65 Ga0265325_10013568 3300031241 Bacteria 4633
66 Ga0265325_10019595 3300031241 Bacteria 3737
67 Ga0265329_10000298 3300031242 Bacteria 26164
68 Ga0265329_10021114 3300031242 Bacteria 2190
69 Ga0265340_10000343 3300031247 Bacteria 24742
70 Ga0265340_10009751 3300031247 Bacteria 5147
71 Ga0265340_10017898 3300031247 Bacteria 3664
72 Ga0265339_10003110 3300031249 Bacteria 11682
73 Ga0265331_10000242 3300031250 Bacteria 65281
74 Ga0265331_10004533 3300031250 Bacteria 8664
75 Ga0265316_10007106 3300031344 Bacteria 10589
76 Ga0265316_10020960 3300031344 Bacteria 5549
77 Ga0265316_10033944 3300031344 Bacteria 4150
78 Ga0265316_10138500 3300031344 Bacteria 1830
79 Ga0265313_10005800 3300031595 Bacteria 8973
80 Ga0265313_10014002 3300031595 Bacteria 4775
81 Ga0265313_10015109 3300031595 Bacteria 4519
82 Ga0265314_10005459 3300031711 Bacteria 11474
83 Ga0265314_10017022 3300031711 Bacteria 5717
84 Ga0265314_10021354 3300031711 Bacteria 4979
85 Ga0265314_10038229 3300031711 Bacteria 3470
86 Ga0265342_10004248 3300031712 Bacteria 11352
87 Ga0307410_10005564 3300031852 Bacteria 6687
88 Ga0307410_10018577 3300031852 Bacteria 4205
89 Ga0307409_100001150 3300031995 Bacteria 12583
90 Ga0307416_100015775 3300032002 Bacteria 5229
91 Ga0307411_10051751 3300032005 Unclassified 2681
92 Ga0373946_0006802 3300035171 Bacteria 4160
93 Ga0373935_0203175 3300035692 Bacteria 1370
94 Ga0373927_0000380 3300035695 Bacteria 34330
95 Ga0373927_0000876 3300035695 Bacteria 22937
96 Ga0373927_0013509 3300035695 Bacteria 5425
97 Ga0373933_0001125 3300035724 Bacteria 15925
98 Ga0373947_0013943 3300035725 Bacteria 4606
99 Ga0373947_0014611 3300035725 Bacteria 4503
100 Ga0373937_0002678 3300036401 Bacteria 14849
101 Ga0373925_0000226 3300037068 Bacteria 60337
102 Ga0373925_0005993 3300037068 Bacteria 9003
103 Ga0436365_1588549 3300039437 Bacteria 2194
104 Ga0436361_1014095 3300039447 Bacteria 8751
105 Ga0451577_0000531 3300042876 Bacteria 63238
106 Ga0451577_0186440 3300042876 Bacteria 1871
107 Ga0453683_0002255 3300044673 Bacteria 15229
108 Ga0453683_0004344 3300044673 Bacteria 10089
109 Ga0453683_0013874 3300044673 Bacteria 5241
110 Ga0453684_0000324 3300044712 Bacteria 201431
111 Ga0451576_0005720 3300045051 Bacteria 15490
112 Ga0451576_0030119 3300045051 Bacteria 5804
113 Ga0466967_0026730 3300045976 Bacteria 4787
114 Ga0466967_0098432 3300045976 Bacteria 2671
115 Ga0495592_0159749 3300046454 Bacteria 1552
116 Ga0495651_0003358 3300046462 Bacteria 12289
117 Ga0495651_0011187 3300046462 Bacteria 6897
118 Ga0495651_0129443 3300046462 Bacteria 1844
119 Ga0495653_0005503 3300046463 Bacteria 10317
120 Ga0495653_0033448 3300046463 Bacteria 4073
121 Ga0495580_0044214 3300046472 Bacteria 3169
122 Ga0495580_0080800 3300046472 Bacteria 2266
123 Ga0495582_0147332 3300046473 Bacteria 1336
124 Ga0495608_0008980 3300046511 Bacteria 6988
125 Ga0495608_0129653 3300046511 Bacteria 1614
126 Ga0495608_0179440 3300046511 Bacteria 1340
127 Ga0495618_0137292 3300046514 Bacteria 1564
128 Ga0495628_0000520 3300046516 Bacteria 35256
129 Ga0495628_0105644 3300046516 Bacteria 2169
130 Ga0495630_0003793 3300046517 Bacteria 10537
131 Ga0495630_0021353 3300046517 Bacteria 4781
132 Ga0495630_0035021 3300046517 Bacteria 3751
133 Ga0495630_0057358 3300046517 Unclassified 2918
134 Ga0495666_0026827 3300046526 Bacteria 2836
135 Ga0495652_0010100 3300046529 Bacteria 8557
136 Ga0495652_0014398 3300046529 Bacteria 7101
137 Ga0495652_0021692 3300046529 Bacteria 5708
138 Ga0495586_0003872 3300046535 Bacteria 8021
139 Ga0495586_0008960 3300046535 Bacteria 5326
140 Ga0495587_0016701 3300046536 Bacteria 4565
141 Ga0495587_0076301 3300046536 Bacteria 1946
142 Ga0495645_0014727 3300046543 Bacteria 5554
143 Ga0495667_0004657 3300046559 Bacteria 9277
144 Ga0495634_0020177 3300046642 Bacteria 4728
145 Ga0495635_0251262 3300046663 Unclassified 1192
146 Ga0495657_0010523 3300046675 Bacteria 6958
147 Ga0495657_0026407 3300046675 Bacteria 4112
148 Ga0495657_0036814 3300046675 Bacteria 3378
149 Ga0495599_0011582 3300046678 Bacteria 5424
150 Ga0495623_0002018 3300046679 Bacteria 13626
151 Ga0495623_0144275 3300046679 Bacteria 1413
152 Ga0495646_0003801 3300046680 Bacteria 9441
153 Ga0495646_0112470 3300046680 Bacteria 1549
154 Ga0495658_0062905 3300046683 Bacteria 2134
155 Ga0495669_0001548 3300046684 Bacteria 9451
156 Ga0495613_0047305 3300046689 Bacteria 3178
157 Ga0495613_0170209 3300046689 Bacteria 1546
158 Ga0495624_0021348 3300046690 Bacteria 4295
159 Ga0495600_0004185 3300046809 Bacteria 8607
160 Ga0495600_0163816 3300046809 Bacteria 1436
161 Ga0495604_0001728 3300047317 Bacteria 17917
162 Ga0495604_0033004 3300047317 Bacteria 4099
163 Ga0495604_0051347 3300047317 Bacteria 3197
164 Ga0495674_0006680 3300047319 Bacteria 11054
165 Ga0495674_0038791 3300047319 Bacteria 4273
166 Ga0495674_0050041 3300047319 Bacteria 3688
167 Ga0495674_0204586 3300047319 Bacteria 1637
168 Ga0495680_0000889 3300047322 Bacteria 33209
169 Ga0495680_0006279 3300047322 Bacteria 11071
170 Ga0495680_0024830 3300047322 Bacteria 4965
171 Ga0495675_0000071 3300047444 Bacteria 70594
172 Ga0495675_0018385 3300047444 Bacteria 4435
173 Ga0495675_0135303 3300047444 Bacteria 1530
174 Ga0495684_0001983 3300047471 Bacteria 16446
175 Ga0495684_0010920 3300047471 Bacteria 7020
176 Ga0495593_0009089 3300047673 Bacteria 5766
177 Ga0495602_0023691 3300048088 Bacteria 5976
178 Ga0495602_0033390 3300048088 Bacteria 4827
179 Ga0495602_0133770 3300048088 Bacteria 1973
180 Ga0495614_0024327 3300048089 Bacteria 2615
181 Ga0496102_0139332 3300048905 Bacteria 2274
182 Ga0496103_0018055 3300048906 Bacteria 4229
183 Ga0496112_0211103 3300048915 Unclassified 1898
184 Ga0496114_0021095 3300048917 Bacteria 5296
185 Ga0496114_0103824 3300048917 Bacteria 2430
186 Ga0496115_0026621 3300048918 Bacteria 4515
187 Ga0496115_0062142 3300048918 Bacteria 3012
188 nmdc:mga0rr50_116029_c1 3300050513 Bacteria 2125
189 nmdc:mga08x19_93_c1 3300050514 Bacteria 79849
190 Ga0436363_0058218
191 Ga0070658_10040777
192 Ga0070680_100035636
193 Ga0070680_100119277
194 Ga0070709_10141777
195 Ga0070681_10028034
196 Ga0068867_100189575
197 Ga0070707_100000051
198 Ga0070707_100219303
199 Ga0070707_100304133
200 Ga0070679_100049844
201 Ga0070697_100024636
202 Ga0068855_100214310
203 Ga0068855_100241563
204 Ga0068855_100305995
205 Ga0068857_100089016
206 Ga0068858_100077522
207 Ga0070712_100084418
208 Ga0075436_100008888
209 Ga0099794_10005072
210 Ga0099795_10005982
211 Ga0105240_10078946
212 Ga0105240_10627543
213 Ga0105245_10031281
214 Ga0105247_10206751
215 Ga0105241_10069307
216 Ga0105248_10028645
217 Ga0105238_10040398
218 Ga0105239_10095758
219 Ga0157374_10038641
220 Ga0157374_10042504
221 Ga0157374_10170337
222 Ga0157378_10071492
223 Ga0157378_10183648
224 Ga0163162_10110198
225 Ga0163162_10196634
226 Ga0157376_10000037
227 Ga0157376_10004873
228 Ga0182007_10003044
229 Ga0207699_10124519
230 Ga0207695_10180580
231 Ga0207663_10042946
232 Ga0207660_10025911
233 Ga0207660_10209611
234 Ga0207657_10000197
235 Ga0207646_10000016
236 Ga0207646_10176307
237 Ga0207650_10159091
238 Ga0207687_10010266
239 Ga0207706_10033945
240 Ga0207711_10019316
241 Ga0207703_10083352
242 Ga0207678_10133127
243 Ga0207641_10008733
244 Ga0207674_10012876
245 Ga0265319_1001893
246 Ga0265318_10000482
247 Ga0265336_10015875
248 Ga0265338_10006303
249 Ga0265338_10061358
250 Ga0265338_10144353
251 Ga0265338_10355167
252 Ga0265320_10002844
253 Ga0265325_10012870
254 Ga0265325_10013568
255 Ga0265325_10019595
256 Ga0265329_10000298
257 Ga0265329_10021114
258 Ga0265340_10000343
259 Ga0265340_10009751
260 Ga0265340_10017898
261 Ga0265339_10003110
262 Ga0265331_10000242
263 Ga0265331_10004533
264 Ga0265316_10007106
265 Ga0265316_10020960
266 Ga0265316_10033944
267 Ga0265316_10138500
268 Ga0265313_10005800
269 Ga0265313_10014002
270 Ga0265313_10015109
271 Ga0265314_10005459
272 Ga0265314_10017022
273 Ga0265314_10021354
274 Ga0265314_10038229
275 Ga0265342_10004248
276 Ga0307410_10005564
277 Ga0307410_10018577
278 Ga0307409_100001150
279 Ga0307416_100015775
280 Ga0307411_10051751
281 Ga0373946_0006802
282 Ga0373935_0203175
283 Ga0373927_0000380
284 Ga0373927_0000876
285 Ga0373927_0013509
286 Ga0373933_0001125
287 Ga0373947_0013943
288 Ga0373947_0014611
289 Ga0373937_0002678
290 Ga0373925_0000226
291 Ga0373925_0005993
292 Ga0436365_1588549
293 Ga0436361_1014095
294 Ga0451577_0000531
295 Ga0451577_0186440
296 Ga0453683_0002255
297 Ga0453683_0004344
298 Ga0453683_0013874
299 Ga0453684_0000324
300 Ga0451576_0005720
301 Ga0451576_0030119
302 Ga0466967_0026730
303 Ga0466967_0098432
304 Ga0495592_0159749
305 Ga0495651_0003358
306 Ga0495651_0011187
307 Ga0495651_0129443
308 Ga0495653_0005503
309 Ga0495653_0033448
310 Ga0495580_0044214
311 Ga0495580_0080800
312 Ga0495582_0147332
313 Ga0495608_0008980
314 Ga0495608_0129653
315 Ga0495608_0179440
316 Ga0495618_0137292
317 Ga0495628_0000520
318 Ga0495628_0105644
319 Ga0495630_0003793
320 Ga0495630_0021353
321 Ga0495630_0035021
322 Ga0495630_0057358
323 Ga0495666_0026827
324 Ga0495652_0010100
325 Ga0495652_0014398
326 Ga0495652_0021692
327 Ga0495586_0003872
328 Ga0495586_0008960
329 Ga0495587_0016701
330 Ga0495587_0076301
331 Ga0495645_0014727
332 Ga0495667_0004657
333 Ga0495634_0020177
334 Ga0495635_0251262
335 Ga0495657_0010523
336 Ga0495657_0026407
337 Ga0495657_0036814
338 Ga0495599_0011582
339 Ga0495623_0002018
340 Ga0495623_0144275
341 Ga0495646_0003801
342 Ga0495646_0112470
343 Ga0495658_0062905
344 Ga0495669_0001548
345 Ga0495613_0047305
346 Ga0495613_0170209
347 Ga0495624_0021348
348 Ga0495600_0004185
349 Ga0495600_0163816
350 Ga0495604_0001728
351 Ga0495604_0033004
352 Ga0495604_0051347
353 Ga0495674_0006680
354 Ga0495674_0038791
355 Ga0495674_0050041
356 Ga0495674_0204586
357 Ga0495680_0000889
358 Ga0495680_0006279
359 Ga0495680_0024830
360 Ga0495675_0000071
361 Ga0495675_0018385
362 Ga0495675_0135303
363 Ga0495684_0001983
364 Ga0495684_0010920
365 Ga0495593_0009089
366 Ga0495602_0023691
367 Ga0495602_0033390
368 Ga0495602_0133770
369 Ga0495614_0024327
370 Ga0496102_0139332
371 Ga0496103_0018055
372 Ga0496112_0211103
373 Ga0496114_0021095
374 Ga0496114_0103824
375 Ga0496115_0026621
376 Ga0496115_0062142
377 nmdc:mga0rr50_116029_c1
378 nmdc:mga08x19_93_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04371

PAD_porph

Porphyromonas-type peptidyl-arginine deiminase

34

397

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xkn-assembly1.cif.gz_A crystal structure of the putative peptidyl-arginine deiminase from chlorobium tepidum, nesg target ctr21 0.9412 1 363
6b2w-assembly2.cif.gz_B c. jejuni c315s agmatine deiminase with substrate bound 0.9144 3 362
6b10-assembly1.cif.gz_A c. jejuni agmatine deiminase 0.912 3 363
2cmu-assembly1.cif.gz_A crystal structure of a putative peptidyl-arginine deiminase 0.9094 1 361
6nib-assembly1.cif.gz_A-2 crystal structure of medicago truncatula agmatine iminohydrolase (deiminase) 0.9084 1 362
ID Description Score Start End Superfamily
1xknA00 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9341 2 363 3.75.10.10
3hvmA00 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9106 1 359 3.75.10.10
6b10B00 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9083 3 362 3.75.10.10
1xknA00 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9022 2 363 3.75.10.10
3hvmA00 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.8973 1 359 3.75.10.10
ID Description Score Start End GO Terms
AF-A0A2V9NUN7-F1-model_v4 Agmatine deiminase 0.99 2 361 GO:0004668
GO:0009446
GO:0047632
AF-A0A2V9QSV2-F1-model_v4 Agmatine deiminase 0.9899 138 362 GO:0004668
GO:0009446
GO:0047632
AF-A0A2V6DB55-F1-model_v4 Agmatine deiminase 0.9862 205 362 GO:0004668
GO:0009446
GO:0047632
AF-A0A524JJ93-F1-model_v4 Agmatine deiminase family protein 0.9845 187 361 GO:0004668
GO:0009446
GO:0047632
AF-A0A0F9K0Z6-F1-model_v4 Agmatine deiminase 0.9836 124 361 GO:0004668
GO:0009446
GO:0047632

Map