F291265

General Info

Members Datasets Scaffolds Average Seq Length
189 144 378 503

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0014540|Ga0395905_0014540_5723_7348
Length 541
Sequence MSECAAGLSAARYFSHVGQPVRCAANEKVFAGEVMVKGKWIEKVVILGGGTAGWMAAAALSHTFGRAVEIVLVESDVIGTVGVGEATIPPIRVFHEMIGIDEAEFIRATGATFKLGIEFRGWLNEGSTYFHPFGAYGVERDIGYFFQYWLRLREKGRVSDFSEFSLCTLAARSNVFAPASERPGDPLQHLQSAYHFDAGRYAKYLKGLCMARGVSHKIGDMLTAERDPENGHVTGLKLKSGELVSGDLFIDCSGARAMLIGQELGVEYVDWSRWLPMNRACAVPCEQKLALAPYTISTAKPFGWQWRIPLQHRVGNGVVYSSEVATDEAAERCLLDGLEGEPLAPINRIRFTAGRRKTPWYKNVVSIGLASGFLEPLESTSIQFIQSSVQRLIKYFPDAGFSPVCAQAFNEEAMRETENVRDFLILHYHATQRDDSELWRYVKSMPIPDSLQERIELFRERGQLNLAAEELFQSTSWHAVLLGQGIRPRTYMPTMALQDDAMLATAYSELERSFKKIVSRLPDHSAYLKEKKLVSIIGNGL

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
8 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
44 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
81 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
82 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
83 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
84 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
85 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
97 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
100 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
101 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
102 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
103 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
107 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
113 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
116 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
117 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
131 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
132 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
133 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
134 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
135 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
136 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
137 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
138 2643221556 Massilia sp. Root1485 Isolate Unclassified
139 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
140 2643221684 Massilia sp. Root133 Isolate Unclassified
141 2643221695 Lysobacter sp. Root494 Isolate Unclassified
142 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
143 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
144 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.24
Metatranscriptomes 0
Isolates 4.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.52
Nodule 0
Rhizoplane 2.65
Rhizosphere 77.25
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0014540 3300037471 Bacteria 7510
2 JGI25154J39366_1000591 3300002738 Bacteria 17514
3 JGI25150J39212_1001938 3300002774 Bacteria 5432
4 rootH2_10018209 3300003320 Bacteria 7743
5 rootL2_10005091 3300003322 Bacteria 9122
6 rootL2_10078252 3300003322 Bacteria 10347
7 rootH1_10000126 3300003323 Bacteria 17560
8 Ga0055529_1000478 3300003763 Bacteria 38030
9 Ga0055536_1018798 3300003781 Bacteria 2198
10 Ga0065165_1018819 3300005262 Bacteria 2485
11 Ga0070658_10030456 3300005327 Bacteria 4335
12 Ga0070690_100015999 3300005330 Bacteria 4486
13 Ga0070690_100016304 3300005330 Bacteria 4448
14 Ga0068869_100036815 3300005334 Bacteria 3475
15 Ga0068869_100104601 3300005334 Bacteria 2146
16 Ga0068869_100107194 3300005334 Bacteria 2121
17 Ga0070682_100019616 3300005337 Bacteria 3969
18 Ga0070660_100014191 3300005339 Bacteria 5737
19 Ga0070689_100001253 3300005340 Bacteria 16163
20 Ga0070689_100032421 3300005340 Bacteria 3973
21 Ga0070661_100046030 3300005344 Bacteria 3191
22 Ga0070675_100002493 3300005354 Bacteria 13777
23 Ga0070675_100043773 3300005354 Bacteria 3660
24 Ga0070674_100023707 3300005356 Bacteria 3975
25 Ga0070688_100069932 3300005365 Bacteria 2243
26 Ga0070705_100004300 3300005440 Bacteria 6941
27 Ga0070662_100001007 3300005457 Bacteria 17226
28 Ga0070662_100130568 3300005457 Bacteria 1936
29 Ga0070662_100169075 3300005457 Bacteria 1716
30 Ga0070672_100001461 3300005543 Bacteria 14650
31 Ga0070686_100038737 3300005544 Bacteria 2965
32 Ga0070696_100037712 3300005546 Bacteria 3334
33 Ga0070664_100054811 3300005564 Bacteria 3384
34 Ga0068859_100044880 3300005617 Bacteria 4441
35 Ga0068864_100061096 3300005618 Bacteria 3264
36 Ga0068861_100001702 3300005719 Bacteria 14124
37 Ga0068861_100011222 3300005719 Bacteria 6219
38 Ga0068861_100016084 3300005719 Bacteria 5284
39 Ga0068863_100086729 3300005841 Bacteria 2966
40 Ga0068863_100224847 3300005841 Bacteria 1809
41 Ga0068858_100083819 3300005842 Bacteria 2965
42 Ga0068860_100005947 3300005843 Bacteria 12279
43 Ga0068860_100044953 3300005843 Bacteria 4209
44 Ga0068862_100030005 3300005844 Bacteria 4582
45 Ga0097621_100027826 3300006237 Bacteria 4450
46 Ga0097621_100028660 3300006237 Bacteria 4390
47 Ga0068871_100025932 3300006358 Bacteria 4567
48 Ga0097620_100044885 3300006931 Bacteria 4441
49 Ga0105242_10021374 3300009176 Bacteria 5079
50 Ga0105248_10016357 3300009177 Bacteria 8164
51 Ga0105239_10022532 3300010375 Bacteria 6944
52 Ga0157369_10279860 3300013105 Bacteria 1737
53 Ga0157380_10032013 3300014326 Bacteria 4041
54 Ga0163161_10033403 3300017792 Bacteria 3677
55 Ga0209437_108563 3300025233 Bacteria 1632
56 Ga0207425_1001701 3300025245 Bacteria 8741
57 Ga0209646_1000104 3300025246 Bacteria 163824
58 Ga0209455_1000047 3300025272 Bacteria 379709
59 Ga0209676_1002842 3300025292 Bacteria 11444
60 Ga0209025_1008573 3300025294 Bacteria 7328
61 Ga0209758_1000403 3300025297 Bacteria 74086
62 Ga0207643_10027370 3300025908 Bacteria 3160
63 Ga0207662_10037691 3300025918 Bacteria 2831
64 Ga0207657_10006427 3300025919 Bacteria 12187
65 Ga0207657_10124321 3300025919 Bacteria 2120
66 Ga0207650_10009976 3300025925 Bacteria 6501
67 Ga0207659_10004592 3300025926 Bacteria 8355
68 Ga0207690_10107158 3300025932 Bacteria 2006
69 Ga0207706_10006707 3300025933 Bacteria 10641
70 Ga0207706_10203558 3300025933 Bacteria 1736
71 Ga0207691_10002944 3300025940 Bacteria 16622
72 Ga0207711_10010000 3300025941 Bacteria 7882
73 Ga0207689_10009733 3300025942 Bacteria 8279
74 Ga0207689_10056685 3300025942 Bacteria 3225
75 Ga0207703_10157093 3300026035 Bacteria 1988
76 Ga0207648_10047880 3300026089 Bacteria 3745
77 Ga0207676_10085395 3300026095 Bacteria 2576
78 Ga0207676_10147644 3300026095 Bacteria 2021
79 Ga0207675_100001965 3300026118 Bacteria 20496
80 Ga0207675_100018027 3300026118 Bacteria 6584
81 Ga0268265_10029519 3300028380 Bacteria 3937
82 Ga0307515_10014980 3300028794 Bacteria 14323
83 Ga0307513_10020092 3300031456 Bacteria 7929
84 Ga0307408_100000071 3300031548 Bacteria 116933
85 Ga0316576_10023603 3300031727 Bacteria 4286
86 Ga0316576_10056636 3300031727 Bacteria 2863
87 Ga0307413_10012299 3300031824 Bacteria 4254
88 Ga0307413_10021863 3300031824 Bacteria 3434
89 Ga0307410_10020261 3300031852 Bacteria 4063
90 Ga0307409_100000049 3300031995 Bacteria 42215
91 Ga0307416_100020682 3300032002 Bacteria 4703
92 Ga0307414_10001517 3300032004 Bacteria 12061
93 Ga0307411_10003645 3300032005 Bacteria 7202
94 Ga0307411_10036811 3300032005 Bacteria 3070
95 Ga0307415_100064100 3300032126 Bacteria 2556
96 Ga0316580_10001210 3300032139 Bacteria 6597
97 Ga0316584_0095948 3300036712 Bacteria 2220
98 Ga0395899_0035978 3300037312 Bacteria 3715
99 Ga0395899_0036376 3300037312 Bacteria 3693
100 Ga0395900_0001224 3300037418 Bacteria 31559
101 Ga0395900_0018590 3300037418 Bacteria 7087
102 Ga0395900_0217489 3300037418 Bacteria 1927
103 Ga0395898_0016143 3300037466 Bacteria 7647
104 Ga0395898_0274995 3300037466 Bacteria 1606
105 Ga0395905_0000091 3300037471 Bacteria 151747
106 Ga0395905_0129109 3300037471 Bacteria 2377
107 Ga0395905_0261881 3300037471 Bacteria 1614
108 Ga0451800_0575488 3300041459 Bacteria 2488
109 Ga0451807_0736441 3300041486 Bacteria 4727
110 Ga0439432_006719 3300042006 Bacteria 4097
111 Ga0439449_0011997 3300042007 Bacteria 3255
112 Ga0439455_0011990 3300042012 Bacteria 1937
113 Ga0439458_0001376 3300042157 Bacteria 6139
114 Ga0466969_0000549 3300044656 Bacteria 20601
115 Ga0466972_0004745 3300044658 Bacteria 6804
116 Ga0466965_0007453 3300044683 Bacteria 5024
117 Ga0466966_0001927 3300044684 Bacteria 13432
118 Ga0466961_0004370 3300044693 Bacteria 8854
119 Ga0466968_0000779 3300044735 Bacteria 11089
120 Ga0466957_0000094 3300044842 Bacteria 35631
121 Ga0466957_0002634 3300044842 Bacteria 9689
122 Ga0466959_0000163 3300045049 Bacteria 43940
123 Ga0466959_0014837 3300045049 Bacteria 5673
124 Ga0466959_0101846 3300045049 Bacteria 2056
125 Ga0466959_0109118 3300045049 Bacteria 1976
126 Ga0466958_0012298 3300045836 Bacteria 4845
127 Ga0495638_0032936 3300046460 Bacteria 3317
128 Ga0495650_0019940 3300046471 Bacteria 3283
129 Ga0495605_0000130 3300046474 Bacteria 98652
130 Ga0495585_0019444 3300046492 Bacteria 3915
131 Ga0495596_0005130 3300046500 Bacteria 6235
132 Ga0495607_0001405 3300046501 Bacteria 21429
133 Ga0495607_0012976 3300046501 Bacteria 5478
134 Ga0495631_0010242 3300046518 Bacteria 4647
135 Ga0495643_0012834 3300046522 Bacteria 5039
136 Ga0495643_0073152 3300046522 Bacteria 1796
137 Ga0495644_0007799 3300046523 Bacteria 4127
138 Ga0495642_0000257 3300046528 Bacteria 29844
139 Ga0495642_0000439 3300046528 Bacteria 21933
140 Ga0495642_0031867 3300046528 Bacteria 2114
141 Ga0495654_0017381 3300046530 Bacteria 3783
142 Ga0495597_0001022 3300046542 Bacteria 21403
143 Ga0495611_0007800 3300046648 Bacteria 4545
144 Ga0495661_0003149 3300046665 Bacteria 12360
145 Ga0495661_0018195 3300046665 Bacteria 4625
146 Ga0495661_0019194 3300046665 Bacteria 4485
147 Ga0495661_0067761 3300046665 Bacteria 2096
148 Ga0495588_0000041 3300046674 Bacteria 377896
149 Ga0495670_0000014 3300046691 Bacteria 138993
150 Ga0495649_0043280 3300046694 Bacteria 2458
151 Ga0495589_0000600 3300046794 Bacteria 24459
152 Ga0495660_0000132 3300046810 Bacteria 81849
153 Ga0495660_0015197 3300046810 Bacteria 4449
154 Ga0495672_0002859 3300047320 Bacteria 15341
155 Ga0495683_0040740 3300047323 Bacteria 2346
156 Ga0495687_000524 3300047443 Bacteria 45771
157 Ga0495677_0004350 3300047445 Bacteria 5442
158 Ga0495681_0000057 3300047470 Bacteria 103340
159 Ga0495626_0000037 3300048091 Bacteria 178573
160 Ga0496106_0101893 3300048909 Bacteria 2227
161 Ga0496110_0042660 3300048913 Bacteria 3960
162 Ga0496115_0045384 3300048918 Bacteria 3508
163 Ga0496122_0002019 3300048925 Bacteria 30169
164 Ga0496123_0005410 3300048926 Bacteria 12864
165 Ga0496123_0015867 3300048926 Bacteria 6150
166 Ga0496124_0003384 3300048927 Bacteria 19580
167 Ga0496125_0090671 3300048928 Bacteria 2293
168 Ga0496126_0110237 3300048929 Bacteria 2398
169 Ga0501034_0000498 3300049571 Bacteria 63644
170 Ga0501072_0070167 3300049588 Bacteria 2767
171 Ga0500644_0009149 3300053088 Bacteria 2640
172 Ga0500583_0057171 3300053092 Bacteria 1830
173 Ga0500595_006983 3300053119 Bacteria 4735
174 Ga0500568_0001257 3300053139 Bacteria 16774
175 Ga0500616_0000018 3300053153 Bacteria 610976
176 Ga0500616_0000101 3300053153 Bacteria 172722
177 Ga0500622_0037891 3300053156 Bacteria 2517
178 Ga0500587_000119 3300053739 Bacteria 7291
179 Ga0466962_0018223 3300061719 Bacteria 3378
180 Ga0466962_0060728 3300061719 Bacteria 1804
181 2643799132 2643221556 Bacteria 7251154
182 2644353824 2643221663 Bacteria 3425771
183 2644473537 2643221684 Bacteria 7145183
184 2644528035 2643221695 Bacteria 3441323
185 2848297839 2848297114 Bacteria 3608511
186 2848299465 2848297114 Bacteria 3608511
187 3000867661 3000865235 Bacteria 3106258
188 3000867663 3000865235 Bacteria 3106258
189 8047679269 8047673197 Bacteria 7395230
190 Ga0395905_0014540
191 JGI25154J39366_1000591
192 JGI25150J39212_1001938
193 rootH2_10018209
194 rootL2_10005091
195 rootL2_10078252
196 rootH1_10000126
197 Ga0055529_1000478
198 Ga0055536_1018798
199 Ga0065165_1018819
200 Ga0070658_10030456
201 Ga0070690_100015999
202 Ga0070690_100016304
203 Ga0068869_100036815
204 Ga0068869_100104601
205 Ga0068869_100107194
206 Ga0070682_100019616
207 Ga0070660_100014191
208 Ga0070689_100001253
209 Ga0070689_100032421
210 Ga0070661_100046030
211 Ga0070675_100002493
212 Ga0070675_100043773
213 Ga0070674_100023707
214 Ga0070688_100069932
215 Ga0070705_100004300
216 Ga0070662_100001007
217 Ga0070662_100130568
218 Ga0070662_100169075
219 Ga0070672_100001461
220 Ga0070686_100038737
221 Ga0070696_100037712
222 Ga0070664_100054811
223 Ga0068859_100044880
224 Ga0068864_100061096
225 Ga0068861_100001702
226 Ga0068861_100011222
227 Ga0068861_100016084
228 Ga0068863_100086729
229 Ga0068863_100224847
230 Ga0068858_100083819
231 Ga0068860_100005947
232 Ga0068860_100044953
233 Ga0068862_100030005
234 Ga0097621_100027826
235 Ga0097621_100028660
236 Ga0068871_100025932
237 Ga0097620_100044885
238 Ga0105242_10021374
239 Ga0105248_10016357
240 Ga0105239_10022532
241 Ga0157369_10279860
242 Ga0157380_10032013
243 Ga0163161_10033403
244 Ga0209437_108563
245 Ga0207425_1001701
246 Ga0209646_1000104
247 Ga0209455_1000047
248 Ga0209676_1002842
249 Ga0209025_1008573
250 Ga0209758_1000403
251 Ga0207643_10027370
252 Ga0207662_10037691
253 Ga0207657_10006427
254 Ga0207657_10124321
255 Ga0207650_10009976
256 Ga0207659_10004592
257 Ga0207690_10107158
258 Ga0207706_10006707
259 Ga0207706_10203558
260 Ga0207691_10002944
261 Ga0207711_10010000
262 Ga0207689_10009733
263 Ga0207689_10056685
264 Ga0207703_10157093
265 Ga0207648_10047880
266 Ga0207676_10085395
267 Ga0207676_10147644
268 Ga0207675_100001965
269 Ga0207675_100018027
270 Ga0268265_10029519
271 Ga0307515_10014980
272 Ga0307513_10020092
273 Ga0307408_100000071
274 Ga0316576_10023603
275 Ga0316576_10056636
276 Ga0307413_10012299
277 Ga0307413_10021863
278 Ga0307410_10020261
279 Ga0307409_100000049
280 Ga0307416_100020682
281 Ga0307414_10001517
282 Ga0307411_10003645
283 Ga0307411_10036811
284 Ga0307415_100064100
285 Ga0316580_10001210
286 Ga0316584_0095948
287 Ga0395899_0035978
288 Ga0395899_0036376
289 Ga0395900_0001224
290 Ga0395900_0018590
291 Ga0395900_0217489
292 Ga0395898_0016143
293 Ga0395898_0274995
294 Ga0395905_0000091
295 Ga0395905_0129109
296 Ga0395905_0261881
297 Ga0451800_0575488
298 Ga0451807_0736441
299 Ga0439432_006719
300 Ga0439449_0011997
301 Ga0439455_0011990
302 Ga0439458_0001376
303 Ga0466969_0000549
304 Ga0466972_0004745
305 Ga0466965_0007453
306 Ga0466966_0001927
307 Ga0466961_0004370
308 Ga0466968_0000779
309 Ga0466957_0000094
310 Ga0466957_0002634
311 Ga0466959_0000163
312 Ga0466959_0014837
313 Ga0466959_0101846
314 Ga0466959_0109118
315 Ga0466958_0012298
316 Ga0495638_0032936
317 Ga0495650_0019940
318 Ga0495605_0000130
319 Ga0495585_0019444
320 Ga0495596_0005130
321 Ga0495607_0001405
322 Ga0495607_0012976
323 Ga0495631_0010242
324 Ga0495643_0012834
325 Ga0495643_0073152
326 Ga0495644_0007799
327 Ga0495642_0000257
328 Ga0495642_0000439
329 Ga0495642_0031867
330 Ga0495654_0017381
331 Ga0495597_0001022
332 Ga0495611_0007800
333 Ga0495661_0003149
334 Ga0495661_0018195
335 Ga0495661_0019194
336 Ga0495661_0067761
337 Ga0495588_0000041
338 Ga0495670_0000014
339 Ga0495649_0043280
340 Ga0495589_0000600
341 Ga0495660_0000132
342 Ga0495660_0015197
343 Ga0495672_0002859
344 Ga0495683_0040740
345 Ga0495687_000524
346 Ga0495677_0004350
347 Ga0495681_0000057
348 Ga0495626_0000037
349 Ga0496106_0101893
350 Ga0496110_0042660
351 Ga0496115_0045384
352 Ga0496122_0002019
353 Ga0496123_0005410
354 Ga0496123_0015867
355 Ga0496124_0003384
356 Ga0496125_0090671
357 Ga0496126_0110237
358 Ga0501034_0000498
359 Ga0501072_0070167
360 Ga0500644_0009149
361 Ga0500583_0057171
362 Ga0500595_006983
363 Ga0500568_0001257
364 Ga0500616_0000018
365 Ga0500616_0000101
366 Ga0500622_0037891
367 Ga0500587_000119
368 Ga0466962_0018223
369 Ga0466962_0060728
370 2643799132
371 2644353824
372 2644473537
373 2644528035
374 2848297839
375 2848299465
376 3000867661
377 3000867663
378 8047679269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04820

Trp_halogenase

Tryptophan halogenase

43

500

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
6y1w-assembly1.cif.gz_B xcc4156, a flavin-dependent halogenase from xanthomonas campestris 0.9653 5 501
6y1w-assembly1.cif.gz_B xcc4156, a flavin-dependent halogenase from xanthomonas campestris 0.9538 5 501
6frl-assembly1.cif.gz_A brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 0.9509 6 496
6frl-assembly1.cif.gz_B brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 0.9489 7 500
6frl-assembly1.cif.gz_A brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 0.9434 6 496
ID Description Score Start End Superfamily
6frlA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9509 6 496 3.50.50.60
6frlA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9434 6 496 3.50.50.60
3lovA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9346 8 40 3.50.50.60
af_Q2G1C4_148_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9256 8 40 3.40.50.720
af_Q2G1C4_26_334_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9256 8 40 3.90.180.10
ID Description Score Start End GO Terms
AF-G7TJG7-F1-model_v4 Tryptophan halogenase 0.9823 235 318 GO:0004497
AF-A0A1G6S6W6-F1-model_v4 deleted 0.982 1 502
AF-A0A2I6QNI1-F1-model_v4 Tryptophan halogenase 0.9761 224 495 GO:0004497
AF-T0ZGS7-F1-model_v4 Tryptophan halogenase 0.9755 381 495 GO:0004497
AF-A0A7X7PSU7-F1-model_v4 Tryptophan 7-halogenase 0.9743 242 496 GO:0004497

Map