F290406

General Info

Members Datasets Scaffolds Average Seq Length
189 122 376 193

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100378202|Ga0068869_1003782021
Length 219
Sequence VRAHLFAVGGGPTPDGRAGCYASSMADPARRRATYDDVLAAPANMVAEIFDGELRLSPRPAKPHAAARAALGEELGPPFKRGRGGPGGWIILDEPELHLGADILVPDLAGWRRERMGALVDDEPFFTIAPDWVAEVISPPTSKYDRTDKLRIYAREKVAWAWLVDPLARTLEVLSLGADGRWVVRDAFRDHTKVRAEPFDAIELDLSILWADVVIPDKP

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
68 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
69 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
74 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
85 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
90 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
96 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
113 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
114 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
115 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
118 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
119 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
122 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 0
Isolates 1.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.23
Nodule 0
Rhizoplane 1.06
Rhizosphere 89.95
Stem 0
Stem Tuber 0
Unclassified 19.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100378202 3300005334 Bacteria 1160
2 rootH2_10260031 3300003320 Unclassified 2094
3 rootL2_10215760 3300003322 Bacteria 1428
4 rootH1_10139982 3300003323 Unclassified 1117
5 Ga0070690_100505027 3300005330 Bacteria 905
6 Ga0070670_100418754 3300005331 Bacteria 1184
7 Ga0070677_10397451 3300005333 Unclassified 725
8 Ga0070682_100316081 3300005337 Bacteria 1151
9 Ga0070682_100376811 3300005337 Unclassified 1066
10 Ga0068868_100319566 3300005338 Unclassified 1322
11 Ga0070689_100275938 3300005340 Bacteria 1393
12 Ga0070671_100887937 3300005355 Bacteria 778
13 Ga0070700_100387307 3300005441 Bacteria 1047
14 Ga0070694_100239412 3300005444 Bacteria 1368
15 Ga0070663_100046876 3300005455 Bacteria 3060
16 Ga0070685_10322511 3300005466 Unclassified 1047
17 Ga0070707_100014840 3300005468 Bacteria 7304
18 Ga0070698_100107224 3300005471 Bacteria 2761
19 Ga0070699_100528874 3300005518 Unclassified 1072
20 Ga0070699_100611169 3300005518 Bacteria 994
21 Ga0070679_100051487 3300005530 Bacteria 4101
22 Ga0070697_100147101 3300005536 Bacteria 1984
23 Ga0068853_100003461 3300005539 Bacteria 12074
24 Ga0070686_100042618 3300005544 Bacteria 2844
25 Ga0070686_100161586 3300005544 Unclassified 1578
26 Ga0070704_100209566 3300005549 Unclassified 1578
27 Ga0070704_100255939 3300005549 Bacteria 1440
28 Ga0068855_100277922 3300005563 Bacteria 1860
29 Ga0068857_100928613 3300005577 Unclassified 835
30 Ga0070702_100063812 3300005615 Unclassified 2152
31 Ga0068852_100158286 3300005616 Bacteria 2112
32 Ga0068859_100640612 3300005617 Bacteria 1155
33 Ga0068864_100179507 3300005618 Bacteria 1935
34 Ga0068861_100326940 3300005719 Bacteria 1337
35 Ga0068860_100685634 3300005843 Bacteria 1034
36 Ga0097621_100027583 3300006237 Bacteria 4468
37 Ga0097621_100030085 3300006237 Bacteria 4295
38 Ga0068865_100148013 3300006881 Bacteria 1778
39 Ga0097620_100640541 3300006931 Bacteria 1155
40 Ga0075435_100541815 3300007076 Unclassified 1007
41 Ga0075435_100701843 3300007076 Unclassified 879
42 Ga0105240_10221734 3300009093 Bacteria 2203
43 Ga0111539_10186625 3300009094 Bacteria 2421
44 Ga0111539_10505971 3300009094 Unclassified 1407
45 Ga0105245_10002599 3300009098 Bacteria 16267
46 Ga0105242_10044616 3300009176 Bacteria 3591
47 Ga0105238_10006135 3300009551 Bacteria 11931
48 Ga0105249_10107861 3300009553 Bacteria 2628
49 Ga0105249_11525392 3300009553 Unclassified 741
50 Ga0163163_11221058 3300014325 Unclassified 814
51 Ga0157380_11345358 3300014326 Bacteria 763
52 Ga0157376_10021312 3300014969 Bacteria 5032
53 Ga0157376_10050267 3300014969 Bacteria 3458
54 Ga0157376_10055458 3300014969 Bacteria 3307
55 Ga0157376_10094702 3300014969 Bacteria 2595
56 Ga0163161_10335735 3300017792 Bacteria 1198
57 Ga0207643_10364656 3300025908 Bacteria 909
58 Ga0207684_10004317 3300025910 Bacteria 13449
59 Ga0207695_10136653 3300025913 Bacteria 2404
60 Ga0207662_10526370 3300025918 Unclassified 816
61 Ga0207694_10023930 3300025924 Bacteria 4638
62 Ga0207687_10003880 3300025927 Bacteria 10035
63 Ga0207709_10150171 3300025935 Bacteria 1613
64 Ga0207667_10211038 3300025949 Bacteria 1990
65 Ga0207712_10252679 3300025961 Bacteria 1426
66 Ga0207677_10634673 3300026023 Unclassified 941
67 Ga0207678_10025152 3300026067 Bacteria 5197
68 Ga0207708_10543315 3300026075 Bacteria 979
69 Ga0207648_10608361 3300026089 Bacteria 1008
70 Ga0207648_11008681 3300026089 Bacteria 780
71 Ga0207676_10139350 3300026095 Bacteria 2074
72 Ga0207676_10270785 3300026095 Bacteria 1538
73 Ga0207674_10285380 3300026116 Bacteria 1599
74 Ga0207428_10078001 3300027907 Bacteria 2592
75 Ga0265337_1017338 3300028556 Unclassified 2310
76 Ga0265337_1071999 3300028556 Unclassified 949
77 Ga0265334_10002544 3300028573 Bacteria 8520
78 Ga0265318_10050742 3300028577 Bacteria 1558
79 Ga0265323_10009849 3300028653 Bacteria 3888
80 Ga0265323_10047385 3300028653 Bacteria 1537
81 Ga0265323_10095730 3300028653 Bacteria 987
82 Ga0265338_10126604 3300028800 Bacteria 2025
83 Ga0265324_10000025 3300029957 Bacteria 161982
84 Ga0265324_10013332 3300029957 Bacteria 3070
85 Ga0265330_10001624 3300031235 Bacteria 12812
86 Ga0265330_10003564 3300031235 Bacteria 8111
87 Ga0265330_10010714 3300031235 Bacteria 4312
88 Ga0265330_10027607 3300031235 Bacteria 2564
89 Ga0265330_10029098 3300031235 Unclassified 2486
90 Ga0265330_10029456 3300031235 Unclassified 2469
91 Ga0265330_10109432 3300031235 Bacteria 1181
92 Ga0265328_10159156 3300031239 Bacteria 851
93 Ga0265325_10004489 3300031241 Bacteria 8807
94 Ga0265325_10008274 3300031241 Bacteria 6145
95 Ga0265325_10185531 3300031241 Unclassified 966
96 Ga0265329_10022168 3300031242 Bacteria 2127
97 Ga0265329_10061672 3300031242 Unclassified 1187
98 Ga0265329_10113299 3300031242 Bacteria 867
99 Ga0265329_10154177 3300031242 Bacteria 745
100 Ga0265340_10005059 3300031247 Bacteria 7329
101 Ga0265340_10008611 3300031247 Bacteria 5499
102 Ga0265340_10184183 3300031247 Bacteria 943
103 Ga0265339_10000014 3300031249 Bacteria 187463
104 Ga0265339_10004782 3300031249 Bacteria 9173
105 Ga0265339_10038932 3300031249 Unclassified 2649
106 Ga0265331_10015280 3300031250 Bacteria 4058
107 Ga0265331_10175920 3300031250 Unclassified 967
108 Ga0265316_10000051 3300031344 Bacteria 126739
109 Ga0265316_10001905 3300031344 Bacteria 21917
110 Ga0265316_10002523 3300031344 Bacteria 18921
111 Ga0265316_10003907 3300031344 Bacteria 14933
112 Ga0265316_10004075 3300031344 Bacteria 14617
113 Ga0265316_10011833 3300031344 Bacteria 7848
114 Ga0265316_10013526 3300031344 Bacteria 7243
115 Ga0265316_10017682 3300031344 Bacteria 6150
116 Ga0265316_10034408 3300031344 Bacteria 4116
117 Ga0265316_10060175 3300031344 Unclassified 2952
118 Ga0265316_10078512 3300031344 Bacteria 2534
119 Ga0265316_10080984 3300031344 Bacteria 2490
120 Ga0265316_10335884 3300031344 Unclassified 1095
121 Ga0307513_10167789 3300031456 Bacteria 2077
122 Ga0307509_10524649 3300031507 Bacteria 865
123 Ga0265313_10077087 3300031595 Bacteria 1522
124 Ga0265314_10000015 3300031711 Bacteria 397180
125 Ga0265314_10026229 3300031711 Bacteria 4380
126 Ga0265342_10000748 3300031712 Bacteria 33370
127 Ga0265342_10000972 3300031712 Bacteria 28473
128 Ga0265342_10001819 3300031712 Bacteria 19380
129 Ga0265342_10007668 3300031712 Bacteria 7860
130 Ga0265342_10172859 3300031712 Bacteria 1187
131 Ga0265342_10175190 3300031712 Unclassified 1177
132 Ga0316576_10453969 3300031727 Bacteria 946
133 Ga0307410_10598039 3300031852 Bacteria 920
134 Ga0307412_10024494 3300031911 Bacteria 3726
135 Ga0373949_0000187 3300035090 Bacteria 23988
136 Ga0373936_0000010 3300035113 Bacteria 254300
137 Ga0316574_0436196 3300035398 Bacteria 822
138 Ga0373937_1162287 3300036401 Bacteria 720
139 Ga0436365_1384866 3300039437 Bacteria 888
140 Ga0451807_2351019 3300041486 Bacteria 892
141 Ga0451837_0734887 3300041494 Bacteria 804
142 Ga0451577_0021518 3300042876 Bacteria 5901
143 Ga0451577_0164703 3300042876 Bacteria 1997
144 Ga0453684_0000673 3300044712 Bacteria 122532
145 Ga0453684_0006420 3300044712 Bacteria 22367
146 Ga0453684_0014962 3300044712 Bacteria 12331
147 Ga0453684_0112892 3300044712 Bacteria 3297
148 Ga0453684_0267212 3300044712 Bacteria 1957
149 Ga0453684_0707968 3300044712 Unclassified 1094
150 Ga0453684_1188974 3300044712 Unclassified 801
151 Ga0451576_0004507 3300045051 Bacteria 18023
152 Ga0451576_0875825 3300045051 Bacteria 942
153 Ga0495586_0271750 3300046535 Bacteria 969
154 Ga0495622_0301131 3300046557 Bacteria 699
155 Ga0495636_0015037 3300047318 Bacteria 3082
156 Ga0495636_0087461 3300047318 Bacteria 1349
157 Ga0495674_0216970 3300047319 Bacteria 1583
158 Ga0496105_0145698 3300048908 Bacteria 1948
159 Ga0501032_0073521 3300049569 Bacteria 2277
160 Ga0501034_0071715 3300049571 Bacteria 3473
161 Ga0501034_0180058 3300049571 Bacteria 2079
162 Ga0501039_0848688 3300049575 Bacteria 712
163 Ga0501040_0701231 3300049576 Bacteria 732
164 Ga0501048_0435997 3300049582 Bacteria 938
165 Ga0501067_0122658 3300049583 Bacteria 1446
166 Ga0501070_0689717 3300049586 Unclassified 808
167 Ga0501073_0001378 3300049589 Bacteria 17940
168 Ga0501073_0018045 3300049589 Bacteria 5103
169 Ga0501074_0435716 3300049590 Bacteria 930
170 Ga0501075_0516821 3300049591 Unclassified 911
171 Ga0501083_0233646 3300049744 Bacteria 1197
172 nmdc:mga08y16_23095_c1 3300050511 Bacteria 6567
173 nmdc:mga08y16_307318_c1 3300050511 Bacteria 1633
174 nmdc:mga08y16_549706_c1 3300050511 Unclassified 1169
175 nmdc:mga0rr50_771190_c1 3300050513 Unclassified 821
176 Ga0500635_0148964 3300053080 Bacteria 892
177 Ga0500566_0044721 3300053094 Bacteria 2550
178 Ga0500640_000105 3300053095 Bacteria 15206
179 Ga0500555_144051 3300053103 Unclassified 586
180 Ga0500595_001167 3300053119 Bacteria 14555
181 Ga0500607_214408 3300053121 Bacteria 810
182 Ga0500614_001366 3300053123 Bacteria 5877
183 Ga0500559_0015847 3300053136 Bacteria 3183
184 Ga0501084_0002299 3300054114 Bacteria 15354
185 Ga0501084_0009196 3300054114 Bacteria 8170
186 Ga0466962_0091828 3300061719 Unclassified 1455
187 2837679454 2837678835 Bacteria 5252418
188 2837682932 2837678835 Bacteria 5252418
189 Ga0068869_100378202
190 rootH2_10260031
191 rootL2_10215760
192 rootH1_10139982
193 Ga0070690_100505027
194 Ga0070670_100418754
195 Ga0070677_10397451
196 Ga0070682_100316081
197 Ga0070682_100376811
198 Ga0068868_100319566
199 Ga0070689_100275938
200 Ga0070671_100887937
201 Ga0070700_100387307
202 Ga0070694_100239412
203 Ga0070663_100046876
204 Ga0070685_10322511
205 Ga0070707_100014840
206 Ga0070698_100107224
207 Ga0070699_100528874
208 Ga0070699_100611169
209 Ga0070679_100051487
210 Ga0070697_100147101
211 Ga0068853_100003461
212 Ga0070686_100042618
213 Ga0070686_100161586
214 Ga0070704_100209566
215 Ga0070704_100255939
216 Ga0068855_100277922
217 Ga0068857_100928613
218 Ga0070702_100063812
219 Ga0068852_100158286
220 Ga0068859_100640612
221 Ga0068864_100179507
222 Ga0068861_100326940
223 Ga0068860_100685634
224 Ga0097621_100027583
225 Ga0097621_100030085
226 Ga0068865_100148013
227 Ga0097620_100640541
228 Ga0075435_100541815
229 Ga0075435_100701843
230 Ga0105240_10221734
231 Ga0111539_10186625
232 Ga0111539_10505971
233 Ga0105245_10002599
234 Ga0105242_10044616
235 Ga0105238_10006135
236 Ga0105249_10107861
237 Ga0105249_11525392
238 Ga0163163_11221058
239 Ga0157380_11345358
240 Ga0157376_10021312
241 Ga0157376_10050267
242 Ga0157376_10055458
243 Ga0157376_10094702
244 Ga0163161_10335735
245 Ga0207643_10364656
246 Ga0207684_10004317
247 Ga0207695_10136653
248 Ga0207662_10526370
249 Ga0207694_10023930
250 Ga0207687_10003880
251 Ga0207709_10150171
252 Ga0207667_10211038
253 Ga0207712_10252679
254 Ga0207677_10634673
255 Ga0207678_10025152
256 Ga0207708_10543315
257 Ga0207648_10608361
258 Ga0207648_11008681
259 Ga0207676_10139350
260 Ga0207676_10270785
261 Ga0207674_10285380
262 Ga0207428_10078001
263 Ga0265337_1017338
264 Ga0265337_1071999
265 Ga0265334_10002544
266 Ga0265318_10050742
267 Ga0265323_10009849
268 Ga0265323_10047385
269 Ga0265323_10095730
270 Ga0265338_10126604
271 Ga0265324_10000025
272 Ga0265324_10013332
273 Ga0265330_10001624
274 Ga0265330_10003564
275 Ga0265330_10010714
276 Ga0265330_10027607
277 Ga0265330_10029098
278 Ga0265330_10029456
279 Ga0265330_10109432
280 Ga0265328_10159156
281 Ga0265325_10004489
282 Ga0265325_10008274
283 Ga0265325_10185531
284 Ga0265329_10022168
285 Ga0265329_10061672
286 Ga0265329_10113299
287 Ga0265329_10154177
288 Ga0265340_10005059
289 Ga0265340_10008611
290 Ga0265340_10184183
291 Ga0265339_10000014
292 Ga0265339_10004782
293 Ga0265339_10038932
294 Ga0265331_10015280
295 Ga0265331_10175920
296 Ga0265316_10000051
297 Ga0265316_10001905
298 Ga0265316_10002523
299 Ga0265316_10003907
300 Ga0265316_10004075
301 Ga0265316_10011833
302 Ga0265316_10013526
303 Ga0265316_10017682
304 Ga0265316_10034408
305 Ga0265316_10060175
306 Ga0265316_10078512
307 Ga0265316_10080984
308 Ga0265316_10335884
309 Ga0307513_10167789
310 Ga0307509_10524649
311 Ga0265313_10077087
312 Ga0265314_10000015
313 Ga0265314_10026229
314 Ga0265342_10000748
315 Ga0265342_10000972
316 Ga0265342_10001819
317 Ga0265342_10007668
318 Ga0265342_10172859
319 Ga0265342_10175190
320 Ga0316576_10453969
321 Ga0307410_10598039
322 Ga0307412_10024494
323 Ga0373949_0000187
324 Ga0373936_0000010
325 Ga0316574_0436196
326 Ga0373937_1162287
327 Ga0436365_1384866
328 Ga0451807_2351019
329 Ga0451837_0734887
330 Ga0451577_0021518
331 Ga0451577_0164703
332 Ga0453684_0000673
333 Ga0453684_0006420
334 Ga0453684_0014962
335 Ga0453684_0112892
336 Ga0453684_0267212
337 Ga0453684_0707968
338 Ga0453684_1188974
339 Ga0451576_0004507
340 Ga0451576_0875825
341 Ga0495586_0271750
342 Ga0495622_0301131
343 Ga0495636_0015037
344 Ga0495636_0087461
345 Ga0495674_0216970
346 Ga0496105_0145698
347 Ga0501032_0073521
348 Ga0501034_0071715
349 Ga0501034_0180058
350 Ga0501039_0848688
351 Ga0501040_0701231
352 Ga0501048_0435997
353 Ga0501067_0122658
354 Ga0501070_0689717
355 Ga0501073_0001378
356 Ga0501073_0018045
357 Ga0501074_0435716
358 Ga0501075_0516821
359 Ga0501083_0233646
360 nmdc:mga08y16_23095_c1
361 nmdc:mga08y16_307318_c1
362 nmdc:mga08y16_549706_c1
363 nmdc:mga0rr50_771190_c1
364 Ga0500635_0148964
365 Ga0500566_0044721
366 Ga0500640_000105
367 Ga0500555_144051
368 Ga0500595_001167
369 Ga0500607_214408
370 Ga0500614_001366
371 Ga0500559_0015847
372 Ga0501084_0002299
373 Ga0501084_0009196
374 Ga0466962_0091828
375 2837679454
376 2837682932

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05685

Uma2

Putative restriction endonuclease

33

208

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lt3-assembly1.cif.gz_P nhej long-range synaptic complex 0.9007 135 163
3ii6-assembly2.cif.gz_C structure of human xrcc4 in complex with the tandem brct domains of dna ligaseiv. 0.8827 135 163
6okh-assembly1.cif.gz_B structure of an uncharacterized protein from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.8816 8 186
5wlz-assembly1.cif.gz_A crystal structure of amino acids 1677-1758 of human beta cardiac myosin fused to xrcc4 0.8805 135 163
3mud-assembly1.cif.gz_B structure of the tropomyosin overlap complex from chicken smooth muscle 0.8734 135 163
ID Description Score Start End Superfamily
af_Q9FKZ7_60_303_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.8555 135 163 2.120.10.80
af_F1LY69_429_766_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8501 143 164 2.130.10.10
af_F1Q5R2_354_542_2.60.120.920 Mainly Beta;Sandwich;Jelly Rolls;SPRY domain 0.8492 139 164 2.60.120.920
3sr2F00 Mainly Beta;Beta Complex;Dna Repair Protein Xrcc4; Chain: A, domain 1;DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.8297 134 163 2.170.210.10
af_F4IZ09_56_391_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8251 145 165 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A4Q5ZTI2-F1-model_v4 deleted 0.9963 107 184
AF-A0A2S9YDG5-F1-model_v4 Putative restriction endonuclease domain-containing protein 0.9921 50 184
AF-A0A1H4FV31-F1-model_v4 Putative restriction endonuclease 0.9895 47 186 GO:0004519
AF-A0A4Q5L1M6-F1-model_v4 deleted 0.9894 81 185
AF-A0A7W0NR64-F1-model_v4 Uma2 family endonuclease 0.9884 1 185 GO:0004519

Map