F289376

General Info

Members Datasets Scaffolds Average Seq Length
188 72 185 914

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10018872|Ga0157374_100188725
Length 969
Sequence MSFVSCWRELNHDLNSSSVLPLVGKNFFMNTPDTIELRKEARVKENSYKKFVFSFSEGNGKNKQLLGGKGANLCEMTQIGLNVPPGFVISTEACLKYLEDPNHSLPAGVLTQVTEHMQEVEQAAGKIFGDFQKPLLVSVRSGSALSMPGMMDTILNLGLNQKTLQGLVIQTGNERFCYDAYRRFIQLFGKVALGVPDERFDKIFEDVKYKAGVKLDIGLSTDNLKEISQRFLDAVKEHTGKPFPEDVYEQLEIAIKAVFNSWMGKRAIDYRREFNITPQMANGTAVNVVAMVFGNMGSDSATGVAFTRDPGTGENILFGEYLVNAQGEDVVAGIRTPKAVLQLREEMPGLYRQLEELRNSLENHYKEVQDFEFTIEKGVLYCLQTRNGKMNGTAMVRTSVEMATEGLITKQEALLRLKPEMLEQLLHPHLDTTKKTTPLAQGLPASPGAASGQCVFDADRAELLGRSGHKVILVREETKPEDIHGFFASQGILTSRGGKTSHAAVVERGMGKPCVAGAEGIHVDVKLRQAIIGEKILHEGDFITIDGGTGYVYQGVIPTFEPSFSDELKTVLQWADETAKIKVMANADTPDAAQKALNYGAMGIGLCRTERMFNAPDRLPIVVEMILANTEEERSVALNQLLPIQRQDFKDILTTMAPRPVTIRLLDPPIHEFLPTQDELKEELAHLHHLKDTASGVNDLFNTLRLLHAYDESSKAAIPFNEKGIELIDQAIVKKELMLKKVRDLYEVNPMLGHRGVRLGLTYPEIYKMQIQAILEAAADCQEANITVCPEIMVPQVCNAEELIRVKSYVKEVQEKIEKERQLKLVFRFGTMIEVVRACVTADELAKEAEFFSFGTNDLTQATFSFSREDAENKFLPLYAEKNILHDNPFEILDTNGVGKLMRFAVEWGRKSNPALKLGICGEHGGQPDSIRFCHDLGLTYVSCSGPRVPIARLAAAHAKLGEAKSSSL

Samples

Sample ID Description Type Environment
1 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
2 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
19 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
20 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
21 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
22 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
25 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
26 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
33 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
36 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
40 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
41 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
46 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
47 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
48 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
49 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
58 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
59 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
60 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
61 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
62 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
63 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
64 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
72 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.96
Metatranscriptomes 7.45
Isolates 1.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 0.53
Rhizosphere 82.45
Stem 0
Stem Tuber 0
Unclassified 16.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100007653 3300005329 Bacteria 9142
2 Ga0070670_100015078 3300005331 Bacteria 6633
3 Ga0070661_100000277 3300005344 Bacteria 41446
4 Ga0070661_100018441 3300005344 Bacteria 4959
5 Ga0070675_100012947 3300005354 Bacteria 6547
6 Ga0070673_100039636 3300005364 Unclassified 3607
7 Ga0070662_100004747 3300005457 Bacteria 8608
8 Ga0070684_100000773 3300005535 Bacteria 22194
9 Ga0070684_100044856 3300005535 Bacteria 3826
10 Ga0068853_100000097 3300005539 Bacteria 59626
11 Ga0070665_100059766 3300005548 Bacteria 3821
12 Ga0070664_100000142 3300005564 Bacteria 49085
13 Ga0068857_100003006 3300005577 Bacteria 13919
14 Ga0075428_100078484 3300006844 Bacteria 3604
15 Ga0075433_10072638 3300006852 Bacteria 3025
16 Ga0075429_100060891 3300006880 Bacteria 3287
17 Ga0111539_10066961 3300009094 Bacteria 4242
18 Ga0105249_10033707 3300009553 Bacteria 4637
19 Ga0157371_10013470 3300013102 Bacteria 6207
20 Ga0157374_10003378 3300013296 Bacteria 13410
21 Ga0157374_10011185 3300013296 Bacteria 7757
22 Ga0157374_10018872 3300013296 Bacteria 6095
23 Ga0157378_10018766 3300013297 Bacteria 6079
24 Ga0163162_10084464 3300013306 Bacteria 3250
25 Ga0163163_10001336 3300014325 Bacteria 20793
26 Ga0157379_10027406 3300014968 Bacteria 5073
27 Ga0163161_10002134 3300017792 Bacteria 14261
28 Ga0207659_10025589 3300025926 Bacteria 3968
29 Ga0207706_10005030 3300025933 Bacteria 12342
30 Ga0207679_10001334 3300025945 Bacteria 15609
31 Ga0207679_10017543 3300025945 Bacteria 4778
32 Ga0207703_10015946 3300026035 Bacteria 5860
33 Ga0207639_10001720 3300026041 Bacteria 14746
34 Ga0207674_10003992 3300026116 Bacteria 17939
35 Ga0207674_10006323 3300026116 Bacteria 13959
36 Ga0265336_10001935 3300028666 Bacteria 8905
37 Ga0307517_10028263 3300028786 Bacteria 6695
38 Ga0265324_10000112 3300029957 Bacteria 64370
39 Ga0265324_10000114 3300029957 Bacteria 63553
40 Ga0265325_10008994 3300031241 Bacteria 5864
41 Ga0265331_10004886 3300031250 Bacteria 8247
42 Ga0265331_10009129 3300031250 Bacteria 5596
43 Ga0265327_10000715 3300031251 Bacteria 52402
44 Ga0265327_10000885 3300031251 Bacteria 44235
45 Ga0265327_10001600 3300031251 Bacteria 27530
46 Ga0265327_10004991 3300031251 Bacteria 11383
47 Ga0265327_10017683 3300031251 Bacteria 4458
48 Ga0265316_10004838 3300031344 Bacteria 13275
49 Ga0307509_10000667 3300031507 Bacteria 58333
50 Ga0316575_10002829 3300031665 Bacteria 5884
51 Ga0316579_10005806 3300031691 Bacteria 5002
52 Ga0316579_10013627 3300031691 Bacteria 3499
53 Ga0265314_10000101 3300031711 Bacteria 129229
54 Ga0316576_10000389 3300031727 Bacteria 20167
55 Ga0316576_10002442 3300031727 Bacteria 10571
56 Ga0316576_10003852 3300031727 Bacteria 8890
57 Ga0316576_10005486 3300031727 Bacteria 7761
58 Ga0316576_10007637 3300031727 Bacteria 6820
59 Ga0316576_10008543 3300031727 Bacteria 6544
60 Ga0316576_10016838 3300031727 Bacteria 4953
61 Ga0316576_10019478 3300031727 Bacteria 4651
62 Ga0316576_10020099 3300031727 Bacteria 4586
63 Ga0316578_10000075 3300031728 Bacteria 22453
64 Ga0316578_10001150 3300031728 Bacteria 10402
65 Ga0316578_10001257 3300031728 Bacteria 10116
66 Ga0316578_10001551 3300031728 Bacteria 9457
67 Ga0316578_10003293 3300031728 Bacteria 7349
68 Ga0316578_10013600 3300031728 Bacteria 4321
69 Ga0316578_10014584 3300031728 Bacteria 4203
70 Ga0316577_10001238 3300031733 Bacteria 11888
71 Ga0316577_10001895 3300031733 Bacteria 10120
72 Ga0316577_10013714 3300031733 Bacteria 4439
73 Ga0316577_10023155 3300031733 Bacteria 3449
74 Ga0316583_10001984 3300032133 Bacteria 6997
75 Ga0316585_10000047 3300032137 Bacteria 18934
76 Ga0316585_10002576 3300032137 Bacteria 4907
77 Ga0316580_10000212 3300032139 Bacteria 12007
78 Ga0316580_10001279 3300032139 Bacteria 6505
79 Ga0316580_10001827 3300032139 Bacteria 5700
80 Ga0316580_10003483 3300032139 Bacteria 4475
81 Ga0316593_10002303 3300032168 Bacteria 4484
82 Ga0316593_10004527 3300032168 Bacteria 3577
83 Ga0316593_10007030 3300032168 Bacteria 3070
84 Ga0316592_1002316 3300033524 Bacteria 3273
85 Ga0316592_1002474 3300033524 Bacteria 3198
86 Ga0316592_1002604 3300033524 Bacteria 3140
87 Ga0316592_1003312 3300033524 Bacteria 2890
88 Ga0316588_1002031 3300033528 Bacteria 3460
89 Ga0316588_1002385 3300033528 Bacteria 3268
90 Ga0316596_1000827 3300033541 Bacteria 5755
91 Ga0316596_1001262 3300033541 Bacteria 5009
92 Ga0316596_1003449 3300033541 Bacteria 3468
93 Ga0316596_1003626 3300033541 Bacteria 3402
94 Ga0316596_1004141 3300033541 Bacteria 3226
95 Ga0373936_0000013 3300035113 Bacteria 219069
96 Ga0316574_0000611 3300035398 Bacteria 14873
97 Ga0316574_0000955 3300035398 Bacteria 12933
98 Ga0316574_0005780 3300035398 Bacteria 6632
99 Ga0316574_0026347 3300035398 Bacteria 3495
100 Ga0316574_0036748 3300035398 Bacteria 3000
101 Ga0316574_0037701 3300035398 Bacteria 2965
102 Ga0316582_0000604 3300036647 Bacteria 13959
103 Ga0316582_0000809 3300036647 Bacteria 12698
104 Ga0316582_0013836 3300036647 Bacteria 4556
105 Ga0316582_0019093 3300036647 Bacteria 4005
106 Ga0316582_0025996 3300036647 Bacteria 3520
107 Ga0316582_0036992 3300036647 Bacteria 3024
108 Ga0316584_0000091 3300036712 Bacteria 36297
109 Ga0316584_0002261 3300036712 Bacteria 12110
110 Ga0316584_0002446 3300036712 Bacteria 11742
111 Ga0316584_0003303 3300036712 Bacteria 10446
112 Ga0316584_0005923 3300036712 Bacteria 8248
113 Ga0316584_0006260 3300036712 Bacteria 8063
114 Ga0316584_0021072 3300036712 Bacteria 4732
115 Ga0316584_0026153 3300036712 Bacteria 4287
116 Ga0316584_0027618 3300036712 Bacteria 4178
117 Ga0400484_35122 3300038725 Bacteria 8860
118 Ga0400490_05605 3300038726 Bacteria 6127
119 Ga0400490_36936 3300038726 Bacteria 13381
120 Ga0400490_44655 3300038726 Bacteria 35811
121 Ga0400485_14652 3300038735 Bacteria 151508
122 Ga0400485_20161 3300038735 Bacteria 6251
123 Ga0400488_03562 3300038741 Bacteria 6089
124 Ga0400488_27219 3300038741 Bacteria 16122
125 Ga0400488_38843 3300038741 Bacteria 5982
126 Ga0400488_53959 3300038741 Bacteria 8327
127 Ga0400486_23786 3300038742 Bacteria 9077
128 Ga0400486_25075 3300038742 Bacteria 30007
129 Ga0400486_31031 3300038742 Bacteria 6259
130 Ga0400483_008545 3300039062 Bacteria 28747
131 Ga0400483_069767 3300039062 Bacteria 26023
132 Ga0400483_093918 3300039062 Bacteria 22629
133 Ga0400483_144098 3300039062 Bacteria 3379
134 Ga0400483_162542 3300039062 Bacteria 11423
135 Ga0400483_281659 3300039062 Bacteria 18410
136 Ga0400489_05438 3300039093 Bacteria 30227
137 Ga0400487_18648 3300039110 Bacteria 24533
138 Ga0400487_32316 3300039110 Bacteria 43418
139 Ga0400487_51648 3300039110 Bacteria 57471
140 Ga0400487_53069 3300039110 Bacteria 20073
141 Ga0400487_65366 3300039110 Bacteria 123063
142 Ga0400487_66484 3300039110 Bacteria 7810
143 Ga0451577_0000002 3300042876 Bacteria 1731375
144 Ga0451577_0000218 3300042876 Bacteria 118324
145 Ga0451577_0000242 3300042876 Bacteria 108150
146 Ga0451577_0002234 3300042876 Bacteria 23544
147 Ga0451577_0005567 3300042876 Bacteria 12830
148 Ga0451577_0006470 3300042876 Bacteria 11672
149 Ga0451577_0013286 3300042876 Bacteria 7713
150 Ga0451577_0016565 3300042876 Bacteria 6820
151 Ga0451577_0036550 3300042876 Bacteria 4421
152 Ga0453683_0000003 3300044673 Bacteria 942572
153 Ga0453684_0000002 3300044712 Bacteria 1731375
154 Ga0453684_0000005 3300044712 Bacteria 1431632
155 Ga0453684_0000013 3300044712 Archaea 1034059
156 Ga0453684_0000029 3300044712 Bacteria 757969
157 Ga0453684_0000129 3300044712 Archaea 332975
158 Ga0453684_0000193 3300044712 Bacteria 266146
159 Ga0453684_0000217 3300044712 Bacteria 250605
160 Ga0453684_0000326 3300044712 Bacteria 200766
161 Ga0453684_0000512 3300044712 Bacteria 150627
162 Ga0453684_0000692 3300044712 Bacteria 120085
163 Ga0453684_0003651 3300044712 Archaea 34171
164 Ga0453684_0004749 3300044712 Bacteria 28053
165 Ga0453684_0005489 3300044712 Bacteria 25077
166 Ga0453684_0009242 3300044712 Bacteria 17313
167 Ga0453684_0010973 3300044712 Bacteria 15312
168 Ga0453684_0014612 3300044712 Bacteria 12533
169 Ga0453684_0022724 3300044712 Bacteria 9290
170 Ga0453684_0064921 3300044712 Bacteria 4659
171 Ga0451576_0000004 3300045051 Bacteria 1312238
172 Ga0451576_0000006 3300045051 Bacteria 949698
173 Ga0451576_0000304 3300045051 Bacteria 119160
174 Ga0451576_0000358 3300045051 Bacteria 109586
175 Ga0451576_0000503 3300045051 Bacteria 85722
176 Ga0451576_0001147 3300045051 Bacteria 47866
177 Ga0451576_0002902 3300045051 Bacteria 24467
178 Ga0451576_0004994 3300045051 Bacteria 16874
179 Ga0451576_0010686 3300045051 Bacteria 10515
180 Ga0451576_0011877 3300045051 Bacteria 9852
181 Ga0451576_0023228 3300045051 Bacteria 6717
182 Ga0451576_0028636 3300045051 Bacteria 5964
183 Ga0496110_0072532 3300048913 Bacteria 3055
184 Ga0501047_0084880 3300049581 Bacteria 3043
185 Ga0500566_0000419 3300053094 Bacteria 23670

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0072532 Ga0496110_0072532_75_2570 798
2 3300035398 Ga0316574_0036748 Ga0316574_0036748_85_2655 837
3 3300042876 Ga0451577_0013286 Ga0451577_0013286_4777_7578 849
4 3300038726 Ga0400490_36936 Ga0400490_36936_2746_5454 853
5 3300038741 Ga0400488_27219 Ga0400488_27219_13540_16110 854
6 3300049581 Ga0501047_0084880 Ga0501047_0084880_15_2585 855
7 3300036712 Ga0316584_0021072 Ga0316584_0021072_11_2596 857
8 3300042876 Ga0451577_0002234 Ga0451577_0002234_11615_14362 871
9 3300045051 Ga0451576_0002902 Ga0451576_0002902_2706_5453 871
10 3300053094 Ga0500566_0000419 Ga0500566_0000419_2810_5611 871
11 3300031727 Ga0316576_10008543 Ga0316576_100085434 873
12 3300036712 Ga0316584_0005923 Ga0316584_0005923_4860_7709 873
13 3300038741 Ga0400488_03562 Ga0400488_03562_3397_6072 873
14 3300045051 Ga0451576_0011877 Ga0451576_0011877_557_3313 880
15 3300035113 Ga0373936_0000013 Ga0373936_0000013_117941_120736 883
16 3300009094 Ga0111539_10066961 Ga0111539_100669613 886
17 3300032168 Ga0316593_10007030 Ga0316593_100070302 893
18 3300031251 Ga0265327_10001600 Ga0265327_1000160028 894
19 3300042876 Ga0451577_0006470 Ga0451577_0006470_7143_9914 894
20 3300044712 Ga0453684_0000013 Ga0453684_0000013_866748_869519 894
21 3300044712 Ga0453684_0003651 Ga0453684_0003651_24468_27242 895
22 3300045051 Ga0451576_0001147 Ga0451576_0001147_38918_41713 895
23 3300028666 Ga0265336_10001935 Ga0265336_100019354 896
24 3300029957 Ga0265324_10000112 Ga0265324_100001122 896
25 3300029957 Ga0265324_10000114 Ga0265324_100001142 896
26 3300031711 Ga0265314_10000101 Ga0265314_1000010176 896
27 3300038726 Ga0400490_05605 Ga0400490_05605_3170_5938 896
28 3300031691 Ga0316579_10013627 Ga0316579_100136272 897
29 3300033528 Ga0316588_1002031 Ga0316588_10020312 897
30 3300035398 Ga0316574_0000611 Ga0316574_0000611_1330_4107 897
31 3300006844 Ga0075428_100078484 Ga0075428_1000784842 898
32 3300006852 Ga0075433_10072638 Ga0075433_100726381 898
33 3300006880 Ga0075429_100060891 Ga0075429_1000608912 898
34 3300009553 Ga0105249_10033707 Ga0105249_100337072 898
35 3300044712 Ga0453684_0010973 Ga0453684_0010973_796_3600 898
36 3300038726 Ga0400490_44655 Ga0400490_44655_3216_5993 899
37 3300039062 Ga0400483_093918 Ga0400483_093918_2158_4944 899
38 3300039110 Ga0400487_32316 Ga0400487_32316_16204_18981 899
39 3300042876 Ga0451577_0000218 Ga0451577_0000218_1411_4182 899
40 3300044712 Ga0453684_0000005 Ga0453684_0000005_445932_448703 899
41 3300044712 Ga0453684_0000193 Ga0453684_0000193_257215_259986 899
42 3300044712 Ga0453684_0000512 Ga0453684_0000512_32758_35529 899
43 3300045051 Ga0451576_0000503 Ga0451576_0000503_4033_6804 899
44 3300045051 Ga0451576_0028636 Ga0451576_0028636_1823_4621 899
45 3300031241 Ga0265325_10008994 Ga0265325_100089942 903
46 3300032139 Ga0316580_10001827 Ga0316580_100018273 903
47 3300036647 Ga0316582_0036992 Ga0316582_0036992_58_2961 903
48 3300039062 Ga0400483_008545 Ga0400483_008545_2256_5018 903
49 3300031728 Ga0316578_10000075 Ga0316578_1000007522 904
50 3300031733 Ga0316577_10001895 Ga0316577_100018958 904
51 3300032133 Ga0316583_10001984 Ga0316583_100019845 904
52 3300032137 Ga0316585_10000047 Ga0316585_1000004720 904
53 3300036647 Ga0316582_0000604 Ga0316582_0000604_4199_6973 904
54 3300036712 Ga0316584_0000091 Ga0316584_0000091_28512_31286 904
55 3300044712 Ga0453684_0000692 Ga0453684_0000692_109956_112754 904
56 3300031250 Ga0265331_10009129 Ga0265331_100091292 905
57 3300031251 Ga0265327_10017683 Ga0265327_100176832 905
58 3300031733 Ga0316577_10023155 Ga0316577_100231551 905
59 3300036712 Ga0316584_0026153 Ga0316584_0026153_1455_4214 905
60 3300044712 Ga0453684_0000326 Ga0453684_0000326_108132_110933 905
61 3300028786 Ga0307517_10028263 Ga0307517_100282635 906
62 3300031251 Ga0265327_10000885 Ga0265327_1000088530 906
63 3300031344 Ga0265316_10004838 Ga0265316_1000483814 906
64 3300031507 Ga0307509_10000667 Ga0307509_1000066715 906
65 3300045051 Ga0451576_0000358 Ga0451576_0000358_20737_23484 906
66 3300045051 Ga0451576_0004994 Ga0451576_0004994_7229_10018 906
67 iso_pu_bacteria 2989392574 2989394481 906
68 3300038741 Ga0400488_38843 Ga0400488_38843_2220_4994 907
69 3300039110 Ga0400487_66484 Ga0400487_66484_2659_5436 907
70 3300042876 Ga0451577_0000002 Ga0451577_0000002_842763_845558 907
71 3300044673 Ga0453683_0000003 Ga0453683_0000003_842763_845558 907
72 3300044712 Ga0453684_0000002 Ga0453684_0000002_885818_888613 907
73 3300045051 Ga0451576_0000004 Ga0451576_0000004_512458_515253 907
74 3300031250 Ga0265331_10004886 Ga0265331_100048862 908
75 3300031251 Ga0265327_10000715 Ga0265327_1000071512 908
76 3300044712 Ga0453684_0000029 Ga0453684_0000029_371838_374633 908
77 iso_pu_bacteria 2894510363 2894514906 908
78 3300005331 Ga0070670_100015078 Ga0070670_1000150782 909
79 3300005354 Ga0070675_100012947 Ga0070675_1000129473 909
80 3300013296 Ga0157374_10003378 Ga0157374_1000337812 909
81 3300013306 Ga0163162_10084464 Ga0163162_100844641 909
82 3300025926 Ga0207659_10025589 Ga0207659_100255892 909
83 3300025945 Ga0207679_10017543 Ga0207679_100175432 909
84 3300035398 Ga0316574_0037701 Ga0316574_0037701_175_2907 910
85 3300038735 Ga0400485_14652 Ga0400485_14652_36159_38924 910
86 3300038741 Ga0400488_53959 Ga0400488_53959_961_3726 910
87 3300038742 Ga0400486_25075 Ga0400486_25075_19648_22413 910
88 3300039110 Ga0400487_65366 Ga0400487_65366_112568_115333 910
89 3300044712 Ga0453684_0004749 Ga0453684_0004749_23897_26677 910
90 3300039062 Ga0400483_281659 Ga0400483_281659_6996_9761 911
91 iso_pu_bacteria 8001522603 8001522956 911
92 3300042876 Ga0451577_0000242 Ga0451577_0000242_29928_32669 913
93 3300044712 Ga0453684_0000217 Ga0453684_0000217_115879_118620 913
94 3300031727 Ga0316576_10003852 Ga0316576_100038526 914
95 3300031727 Ga0316576_10020099 Ga0316576_100200992 914
96 3300031728 Ga0316578_10001551 Ga0316578_100015517 914
97 3300031728 Ga0316578_10003293 Ga0316578_100032935 914
98 3300031733 Ga0316577_10013714 Ga0316577_100137142 914
99 3300032139 Ga0316580_10001279 Ga0316580_100012792 914
100 3300033541 Ga0316596_1004141 Ga0316596_10041411 914
101 3300036712 Ga0316584_0003303 Ga0316584_0003303_5676_8447 914
102 3300044712 Ga0453684_0005489 Ga0453684_0005489_18204_20951 914
103 3300045051 Ga0451576_0000006 Ga0451576_0000006_425003_427750 914
104 3300045051 Ga0451576_0000304 Ga0451576_0000304_47469_50216 914
105 3300026035 Ga0207703_10015946 Ga0207703_100159463 915
106 3300031251 Ga0265327_10004991 Ga0265327_100049912 915
107 3300039110 Ga0400487_18648 Ga0400487_18648_16062_18821 916
108 3300044712 Ga0453684_0022724 Ga0453684_0022724_5997_8750 916
109 3300036647 Ga0316582_0019093 Ga0316582_0019093_773_3562 917
110 3300036712 Ga0316584_0027618 Ga0316584_0027618_351_3140 917
111 3300039062 Ga0400483_069767 Ga0400483_069767_15011_17773 917
112 3300038735 Ga0400485_20161 Ga0400485_20161_389_3154 918
113 3300038742 Ga0400486_31031 Ga0400486_31031_390_3155 918
114 3300039062 Ga0400483_144098 Ga0400483_144098_453_3218 918
115 3300038725 Ga0400484_35122 Ga0400484_35122_5474_8242 919
116 3300031727 Ga0316576_10005486 Ga0316576_100054864 920
117 3300032168 Ga0316593_10004527 Ga0316593_100045272 920
118 3300033524 Ga0316592_1002474 Ga0316592_10024741 920
119 3300033524 Ga0316592_1002604 Ga0316592_10026041 920
120 3300033541 Ga0316596_1003449 Ga0316596_10034492 920
121 3300035398 Ga0316574_0000955 Ga0316574_0000955_9039_11810 920
122 3300042876 Ga0451577_0016565 Ga0451577_0016565_3632_6397 920
123 3300044712 Ga0453684_0000129 Ga0453684_0000129_213636_216410 920
124 3300031665 Ga0316575_10002829 Ga0316575_100028294 921
125 3300031727 Ga0316576_10000389 Ga0316576_1000038910 921
126 3300031727 Ga0316576_10002442 Ga0316576_100024424 921
127 3300031727 Ga0316576_10007637 Ga0316576_100076372 921
128 3300031727 Ga0316576_10016838 Ga0316576_100168383 921
129 3300031727 Ga0316576_10019478 Ga0316576_100194783 921
130 3300031728 Ga0316578_10001150 Ga0316578_100011507 921
131 3300031728 Ga0316578_10001257 Ga0316578_100012576 921
132 3300031728 Ga0316578_10013600 Ga0316578_100136003 921
133 3300031728 Ga0316578_10014584 Ga0316578_100145841 921
134 3300031733 Ga0316577_10001238 Ga0316577_100012387 921
135 3300032137 Ga0316585_10002576 Ga0316585_100025761 921
136 3300032139 Ga0316580_10000212 Ga0316580_100002127 921
137 3300033524 Ga0316592_1002316 Ga0316592_10023162 921
138 3300033524 Ga0316592_1003312 Ga0316592_10033121 921
139 3300033528 Ga0316588_1002385 Ga0316588_10023851 921
140 3300033541 Ga0316596_1000827 Ga0316596_10008273 921
141 3300033541 Ga0316596_1001262 Ga0316596_10012624 921
142 3300033541 Ga0316596_1003626 Ga0316596_10036261 921
143 3300035398 Ga0316574_0005780 Ga0316574_0005780_1281_4061 921
144 3300036647 Ga0316582_0000809 Ga0316582_0000809_4772_7546 921
145 3300036712 Ga0316584_0002261 Ga0316584_0002261_638_3412 921
146 3300036712 Ga0316584_0002446 Ga0316584_0002446_1007_3799 921
147 3300036712 Ga0316584_0006260 Ga0316584_0006260_189_2963 921
148 3300039110 Ga0400487_51648 Ga0400487_51648_47131_49908 922
149 3300044712 Ga0453684_0009242 Ga0453684_0009242_1653_4436 922
150 3300032168 Ga0316593_10002303 Ga0316593_100023032 923
151 3300038742 Ga0400486_23786 Ga0400486_23786_4711_7491 923
152 3300039062 Ga0400483_162542 Ga0400483_162542_5044_7824 923
153 3300039093 Ga0400489_05438 Ga0400489_05438_2009_4789 923
154 3300039110 Ga0400487_53069 Ga0400487_53069_1819_4599 923
155 3300035398 Ga0316574_0026347 Ga0316574_0026347_363_3173 924
156 3300031691 Ga0316579_10005806 Ga0316579_100058062 925
157 3300036647 Ga0316582_0013836 Ga0316582_0013836_1551_4337 925
158 3300014968 Ga0157379_10027406 Ga0157379_100274064 926
159 3300032139 Ga0316580_10003483 Ga0316580_100034832 927
160 3300036647 Ga0316582_0025996 Ga0316582_0025996_56_2845 927
161 3300044712 Ga0453684_0064921 Ga0453684_0064921_1355_4162 933
162 3300045051 Ga0451576_0010686 Ga0451576_0010686_4778_7585 933
163 3300042876 Ga0451577_0005567 Ga0451577_0005567_2905_5727 937
164 3300044712 Ga0453684_0014612 Ga0453684_0014612_3140_5962 937
165 3300045051 Ga0451576_0023228 Ga0451576_0023228_420_3242 937
166 3300042876 Ga0451577_0036550 Ga0451577_0036550_135_2960 938
167 3300005548 Ga0070665_100059766 Ga0070665_1000597662 939
168 3300005329 Ga0070683_100007653 Ga0070683_1000076536 940
169 3300005344 Ga0070661_100000277 Ga0070661_10000027735 940
170 3300005344 Ga0070661_100018441 Ga0070661_1000184411 940
171 3300005364 Ga0070673_100039636 Ga0070673_1000396361 940
172 3300005457 Ga0070662_100004747 Ga0070662_1000047477 940
173 3300005535 Ga0070684_100000773 Ga0070684_10000077311 940
174 3300005535 Ga0070684_100044856 Ga0070684_1000448562 940
175 3300005539 Ga0068853_100000097 Ga0068853_10000009753 940
176 3300005564 Ga0070664_100000142 Ga0070664_1000001424 940
177 3300005577 Ga0068857_100003006 Ga0068857_1000030062 940
178 3300013102 Ga0157371_10013470 Ga0157371_100134702 940
179 3300013296 Ga0157374_10011185 Ga0157374_100111853 940
180 3300013296 Ga0157374_10018872 Ga0157374_100188725 940
181 3300013297 Ga0157378_10018766 Ga0157378_100187663 940
182 3300014325 Ga0163163_10001336 Ga0163163_100013367 940
183 3300017792 Ga0163161_10002134 Ga0163161_100021342 940
184 3300025933 Ga0207706_10005030 Ga0207706_100050306 940
185 3300025945 Ga0207679_10001334 Ga0207679_100013341 940
186 3300026041 Ga0207639_10001720 Ga0207639_100017202 940
187 3300026116 Ga0207674_10003992 Ga0207674_100039929 940
188 3300026116 Ga0207674_10006323 Ga0207674_100063232 940

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00391

PEP-utilizers

PEP-utilising enzyme, mobile domain

468

550

0.97

PF02896

PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

563

961

0.95

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

63

350

0.91

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

338

407

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fm4-assembly1.cif.gz_A nmr structure of the phosphoryl carrier domain of pyruvate phosphate dikinase 0.8658 402 529
2fm4-assembly1.cif.gz_A nmr structure of the phosphoryl carrier domain of pyruvate phosphate dikinase 0.8598 402 529
6vbj-assembly1.cif.gz_B crystal structure of the hybrid c-terminal domain of enzyme i of the bacterial phosphotransferase system formed by hybridizing the scaffold of the thermoanaerobacter tengcongensis enzyme with the active site loops from the escherichia coli enzyme 0.843 551 924
6vu0-assembly1.cif.gz_B crystal structure of the c-terminal domain of enzyme i of the bacterial phosphotransferase system from the escherichia coli enzyme 0.8391 551 923
6v9k-assembly1.cif.gz_B crystal structure of the hybrid c-terminal domain of enzyme i of the bacterial phosphotransferase system formed by hybridizing the scaffold of the escherichia coli enzyme with the active site loops from the thermoanaerobacter tengcongensis enzyme 0.8368 550 923
ID Description Score Start End Superfamily
1kblA05 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.9811 130 215 1.20.80.30
2r82A02 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.981 130 214 1.20.80.30
1kc7A05 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.9788 130 215 1.20.80.30
1buk005 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.9662 130 215 1.20.80.30
5jvjA02 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.9618 130 214 1.20.80.30
ID Description Score Start End GO Terms
AF-A0A7Z9XTY9-F1-model_v4 Pyruvate phosphate dikinase 0.9921 21 228 GO:0005524
GO:0006090
GO:0016301
GO:0050242
AF-A0A842R3X1-F1-model_v4 Pyruvate, phosphate dikinase (EC 2.7.9.1) 0.9916 813 934 GO:0006090
GO:0016301
GO:0050242
AF-A0A354DIY4-F1-model_v4 Pyruvate, phosphate dikinase (EC 2.7.9.1) 0.9912 127 226 GO:0006090
GO:0016301
GO:0050242
AF-A0A075I3E3-F1-model_v4 Pyruvate phosphate dikinase (PpdK) (EC 2.7.9.1) 0.9904 764 937 GO:0006090
GO:0016301
GO:0050242
AF-A0A1F3M1D6-F1-model_v4 Pyruvate, phosphate dikinase (Pyruvate, orthophosphate dikinase) 0.99 803 930 GO:0006090
GO:0050242

Feature Viewer

pLDDT pTM Quality
85.74 0.8 High
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Predicted Structure (AlphaFold2)

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