F288652

General Info

Members Datasets Scaffolds Average Seq Length
188 122 376 414

Family's Representative Sequence

Representative Sequence 3300003203|JGI25406J46586_10004604|JGI25406J46586_100046044
Length 444
Sequence VTNTVVLVATTTGYQIRSFGEAAEKLGVGLVFASDRCDQLEDPWWDAAIPVRFHEPERSTEAVVSALVDAPPRGVLAVGDRPTLLAARLADAFGLAGNPAAAAAASRNKLAAREALRAADLLTPSYRVVSLDSSARSLARRAGYPVVIKPLALSGSRGVMRADTEAEFVDRFERLRRLLQSPDVRGERDAVHDRVLVESFIPGREFAVEGVLTRGTFAPFAIFDKPDPLDGPFFEETIYVTPSRETAKTQHAIVDAVAAAARAIGLWHGPVHAECRVNDTGAYVLEVAARPIGGLCSKALSFEPQRAHGTERTPPTRSAITTHESQITTGHVSLEEVLLRHAIGEDISKFTRERAASGVMMIPIPKRGVFRAVDGLDEARSVEGIEEIVITAKRDALLVPLPEGRSYLGFIFARADAAATVERALRDAHARLRFSIERELTLIG

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
80 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
91 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
92 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
93 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
94 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
95 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
96 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
97 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
117 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
118 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
119 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
120 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.6
Rhizosphere 98.4
Stem 0
Stem Tuber 0
Unclassified 9.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10004604 3300003203 Bacteria 6419
2 JGI25406J46586_10000077 3300003203 Bacteria 44105
3 Ga0065712_10000739 3300005290 Bacteria 9601
4 Ga0065707_10002198 3300005295 Bacteria 5831
5 Ga0070676_10153412 3300005328 Bacteria 1476
6 Ga0070683_100012817 3300005329 Bacteria 7296
7 Ga0070683_100236373 3300005329 Bacteria 1738
8 Ga0070689_100037475 3300005340 Bacteria 3707
9 Ga0070689_100162430 3300005340 Bacteria 1806
10 Ga0070675_100007381 3300005354 Bacteria 8490
11 Ga0070675_100017933 3300005354 Bacteria 5631
12 Ga0070675_100119965 3300005354 Bacteria 2234
13 Ga0070673_100094993 3300005364 Unclassified 2445
14 Ga0070688_100062346 3300005365 Bacteria 2360
15 Ga0070713_100009000 3300005436 Bacteria 7118
16 Ga0070705_100001246 3300005440 Bacteria 13745
17 Ga0070694_100004341 3300005444 Bacteria 8522
18 Ga0068867_100117351 3300005459 Bacteria 2052
19 Ga0070699_100034515 3300005518 Bacteria 4373
20 Ga0070684_100073087 3300005535 Unclassified 3021
21 Ga0070684_100076521 3300005535 Unclassified 2954
22 Ga0070695_100000045 3300005545 Bacteria 47391
23 Ga0070696_100000162 3300005546 Bacteria 37754
24 Ga0070704_100031576 3300005549 Bacteria 3565
25 Ga0068855_100047918 3300005563 Bacteria 5046
26 Ga0070702_100040383 3300005615 Bacteria 2610
27 Ga0068859_100020711 3300005617 Bacteria 6599
28 Ga0068861_100168897 3300005719 Bacteria 1811
29 Ga0068870_10014550 3300005840 Bacteria 3717
30 Ga0081455_10052970 3300005937 Bacteria 3469
31 Ga0081539_10000084 3300005985 Bacteria 218801
32 Ga0081539_10000336 3300005985 Bacteria 104057
33 Ga0081539_10004498 3300005985 Bacteria 15333
34 Ga0070715_10068909 3300006163 Bacteria 1575
35 Ga0097621_100008840 3300006237 Bacteria 7282
36 Ga0097621_100102416 3300006237 Bacteria 2410
37 Ga0097621_100147132 3300006237 Bacteria 2018
38 Ga0068871_100010753 3300006358 Bacteria 6694
39 Ga0075428_100001067 3300006844 Bacteria 29125
40 Ga0075428_100017274 3300006844 Bacteria 7973
41 Ga0075428_100028926 3300006844 Bacteria 6132
42 Ga0075428_100030761 3300006844 Bacteria 5936
43 Ga0075430_100052003 3300006846 Bacteria 3450
44 Ga0075430_100081828 3300006846 Bacteria 2705
45 Ga0075431_100013152 3300006847 Bacteria 8360
46 Ga0075431_100054844 3300006847 Bacteria 4110
47 Ga0075434_100005461 3300006871 Bacteria 11577
48 Ga0075434_100018395 3300006871 Bacteria 6750
49 Ga0075434_100051709 3300006871 Bacteria 4083
50 Ga0075429_100002236 3300006880 Bacteria 16185
51 Ga0075429_100108583 3300006880 Unclassified 2425
52 Ga0075436_100119244 3300006914 Bacteria 1845
53 Ga0097620_100020711 3300006931 Bacteria 6599
54 Ga0075435_100003340 3300007076 Bacteria 10884
55 Ga0111539_10000140 3300009094 Bacteria 82527
56 Ga0111539_10000155 3300009094 Bacteria 78151
57 Ga0111539_10001668 3300009094 Bacteria 29647
58 Ga0111539_10004975 3300009094 Bacteria 17293
59 Ga0111539_10046324 3300009094 Bacteria 5201
60 Ga0111539_10314332 3300009094 Bacteria 1823
61 Ga0105245_10002868 3300009098 Bacteria 15482
62 Ga0105245_10154562 3300009098 Bacteria 2172
63 Ga0105245_10352058 3300009098 Unclassified 1459
64 Ga0114129_10000090 3300009147 Bacteria 86472
65 Ga0114129_10038934 3300009147 Bacteria 6701
66 Ga0114129_10043156 3300009147 Bacteria 6345
67 Ga0114129_10055325 3300009147 Bacteria 5561
68 Ga0114129_10080989 3300009147 Bacteria 4513
69 Ga0105243_10203138 3300009148 Unclassified 1739
70 Ga0105243_10265766 3300009148 Unclassified 1538
71 Ga0105242_10015249 3300009176 Bacteria 5969
72 Ga0105248_10307169 3300009177 Unclassified 1786
73 Ga0105249_10002362 3300009553 Bacteria 16384
74 Ga0105239_10249203 3300010375 Bacteria 1995
75 Ga0105246_10039483 3300011119 Bacteria 3180
76 Ga0105246_10163634 3300011119 Bacteria 1697
77 Ga0157369_10150869 3300013105 Bacteria 2456
78 Ga0157374_10037677 3300013296 Bacteria 4440
79 Ga0157374_10157412 3300013296 Bacteria 2212
80 Ga0157372_10329367 3300013307 Unclassified 1778
81 Ga0157375_10073653 3300013308 Bacteria 3435
82 Ga0157375_10079996 3300013308 Bacteria 3305
83 Ga0157375_10186648 3300013308 Bacteria 2227
84 Ga0163163_10074361 3300014325 Bacteria 3390
85 Ga0157380_10040543 3300014326 Bacteria 3627
86 Ga0157377_10020180 3300014745 Bacteria 3488
87 Ga0157376_10154766 3300014969 Bacteria 2071
88 Ga0207643_10010701 3300025908 Bacteria 4944
89 Ga0207694_10010735 3300025924 Bacteria 6917
90 Ga0207650_10211065 3300025925 Bacteria 1559
91 Ga0207659_10017718 3300025926 Bacteria 4655
92 Ga0207659_10096956 3300025926 Bacteria 2214
93 Ga0207687_10002080 3300025927 Bacteria 13680
94 Ga0207687_10068558 3300025927 Bacteria 2527
95 Ga0207687_10104418 3300025927 Unclassified 2092
96 Ga0207686_10005469 3300025934 Bacteria 6818
97 Ga0207709_10159992 3300025935 Unclassified 1569
98 Ga0207670_10135965 3300025936 Bacteria 1807
99 Ga0207711_10002714 3300025941 Bacteria 15622
100 Ga0207661_10007221 3300025944 Bacteria 7897
101 Ga0207661_10067929 3300025944 Bacteria 2901
102 Ga0207651_10010889 3300025960 Bacteria 5062
103 Ga0207703_10033072 3300026035 Bacteria 4097
104 Ga0207674_10155844 3300026116 Bacteria 2239
105 Ga0207675_100173458 3300026118 Bacteria 2062
106 Ga0207428_10000743 3300027907 Bacteria 37326
107 Ga0207428_10017750 3300027907 Bacteria 6102
108 Ga0207428_10043429 3300027907 Bacteria 3630
109 Ga0268265_10249491 3300028380 Bacteria 1571
110 Ga0307405_10021017 3300031731 Bacteria 3661
111 Ga0307413_10001750 3300031824 Bacteria 8492
112 Ga0307413_10008254 3300031824 Bacteria 4903
113 Ga0307410_10003020 3300031852 Bacteria 8307
114 Ga0307410_10028582 3300031852 Unclassified 3540
115 Ga0307410_10078107 3300031852 Unclassified 2316
116 Ga0307406_10047884 3300031901 Bacteria 2697
117 Ga0307407_10024710 3300031903 Bacteria 3155
118 Ga0307412_10022210 3300031911 Bacteria 3886
119 Ga0307409_100121973 3300031995 Bacteria 2209
120 Ga0307409_100187429 3300031995 Unclassified 1838
121 Ga0307416_100003248 3300032002 Bacteria 9525
122 Ga0307414_10026442 3300032004 Bacteria 3735
123 Ga0373934_0004102 3300035086 Bacteria 5368
124 Ga0373934_0059668 3300035086 Bacteria 1518
125 Ga0373923_0013013 3300035111 Bacteria 3091
126 Ga0373954_0020038 3300035118 Bacteria 3021
127 Ga0373954_0021071 3300035118 Bacteria 2951
128 Ga0373954_0030804 3300035118 Bacteria 2474
129 Ga0373924_0062733 3300035410 Bacteria 1557
130 Ga0373935_0072082 3300035692 Bacteria 2230
131 Ga0373927_0000944 3300035695 Bacteria 22130
132 Ga0373933_0010268 3300035724 Bacteria 5130
133 Ga0373937_0003558 3300036401 Bacteria 13123
134 Ga0373937_0003683 3300036401 Bacteria 12945
135 Ga0373937_0027453 3300036401 Bacteria 5148
136 Ga0439439_0016054 3300041406 Bacteria 1831
137 Ga0451576_0007871 3300045051 Bacteria 12631
138 Ga0451576_0059760 3300045051 Bacteria 3978
139 Ga0495603_0046373 3300046455 Bacteria 2590
140 Ga0495580_0125547 3300046472 Unclassified 1781
141 Ga0495584_0077525 3300046491 Bacteria 1671
142 Ga0495643_0037059 3300046522 Bacteria 2677
143 Ga0495642_0004956 3300046528 Bacteria 5133
144 Ga0495598_0008304 3300046537 Bacteria 2414
145 Ga0495609_0009956 3300046538 Bacteria 4579
146 Ga0495656_0008310 3300046615 Bacteria 3702
147 Ga0495659_0018366 3300046664 Bacteria 2329
148 Ga0495599_0009281 3300046678 Bacteria 6008
149 Ga0495613_0095673 3300046689 Bacteria 2148
150 Ga0495636_0001985 3300047318 Bacteria 7831
151 Ga0495676_0032218 3300047321 Bacteria 4428
152 Ga0495684_0027973 3300047471 Bacteria 4330
153 Ga0496102_0356023 3300048905 Bacteria 1378
154 Ga0496109_0095513 3300048912 Bacteria 2753
155 Ga0496114_0012621 3300048917 Bacteria 6767
156 Ga0501031_0127425 3300049568 Bacteria 1663
157 Ga0501042_0102927 3300049578 Unclassified 2054
158 Ga0501048_0159904 3300049582 Bacteria 1594
159 Ga0501076_0214010 3300049592 Bacteria 1575
160 Ga0501081_0111627 3300049743 Bacteria 1940
161 nmdc:mga05p37_26872_c1 3300050507 Bacteria 7003
162 nmdc:mga05p37_2872_c1 3300050507 Bacteria 19997
163 nmdc:mga05p37_30844_c1 3300050507 Bacteria 6543
164 nmdc:mga05p37_96099_c1 3300050507 Bacteria 3650
165 nmdc:mga09592_110049_c1 3300050508 Bacteria 2363
166 nmdc:mga09592_12780_c1 3300050508 Bacteria 6843
167 nmdc:mga09592_142290_c1 3300050508 Unclassified 2068
168 nmdc:mga06r32_14712_c1 3300050510 Bacteria 7102
169 nmdc:mga06r32_15824_c1 3300050510 Bacteria 6860
170 nmdc:mga06r32_31062_c1 3300050510 Bacteria 5015
171 nmdc:mga08y16_1458_c1 3300050511 Bacteria 23716
172 nmdc:mga08y16_200152_c1 3300050511 Bacteria 2070
173 nmdc:mga08y16_2721_c1 3300050511 Bacteria 18133
174 nmdc:mga08y16_3877_c1 3300050511 Bacteria 15561
175 nmdc:mga08y16_498_c1 3300050511 Bacteria 36164
176 nmdc:mga08y16_65677_c1 3300050511 Bacteria 3787
177 nmdc:mga0n895_12022_c1 3300050512 Bacteria 7747
178 nmdc:mga0n895_51937_c1 3300050512 Bacteria 4023
179 nmdc:mga0n895_58316_c1 3300050512 Bacteria 3806
180 nmdc:mga0a205_13435_c1 3300050515 Bacteria 7624
181 Ga0590071_000807 3300059421 Bacteria 8751
182 Ga0590071_016526 3300059421 Archaea 1731
183 Ga0590074_003119 3300059423 Bacteria 2734
184 Ga0590075_000080 3300059424 Bacteria 24664
185 Ga0590077_000218 3300059426 Bacteria 16479
186 Ga0590077_004912 3300059426 Unclassified 2734
187 Ga0501082_0000262 3300060353 Bacteria 46264
188 Ga0530510_0082263 3300061734 Bacteria 2345
189 JGI25406J46586_10004604
190 JGI25406J46586_10000077
191 Ga0065712_10000739
192 Ga0065707_10002198
193 Ga0070676_10153412
194 Ga0070683_100012817
195 Ga0070683_100236373
196 Ga0070689_100037475
197 Ga0070689_100162430
198 Ga0070675_100007381
199 Ga0070675_100017933
200 Ga0070675_100119965
201 Ga0070673_100094993
202 Ga0070688_100062346
203 Ga0070713_100009000
204 Ga0070705_100001246
205 Ga0070694_100004341
206 Ga0068867_100117351
207 Ga0070699_100034515
208 Ga0070684_100073087
209 Ga0070684_100076521
210 Ga0070695_100000045
211 Ga0070696_100000162
212 Ga0070704_100031576
213 Ga0068855_100047918
214 Ga0070702_100040383
215 Ga0068859_100020711
216 Ga0068861_100168897
217 Ga0068870_10014550
218 Ga0081455_10052970
219 Ga0081539_10000084
220 Ga0081539_10000336
221 Ga0081539_10004498
222 Ga0070715_10068909
223 Ga0097621_100008840
224 Ga0097621_100102416
225 Ga0097621_100147132
226 Ga0068871_100010753
227 Ga0075428_100001067
228 Ga0075428_100017274
229 Ga0075428_100028926
230 Ga0075428_100030761
231 Ga0075430_100052003
232 Ga0075430_100081828
233 Ga0075431_100013152
234 Ga0075431_100054844
235 Ga0075434_100005461
236 Ga0075434_100018395
237 Ga0075434_100051709
238 Ga0075429_100002236
239 Ga0075429_100108583
240 Ga0075436_100119244
241 Ga0097620_100020711
242 Ga0075435_100003340
243 Ga0111539_10000140
244 Ga0111539_10000155
245 Ga0111539_10001668
246 Ga0111539_10004975
247 Ga0111539_10046324
248 Ga0111539_10314332
249 Ga0105245_10002868
250 Ga0105245_10154562
251 Ga0105245_10352058
252 Ga0114129_10000090
253 Ga0114129_10038934
254 Ga0114129_10043156
255 Ga0114129_10055325
256 Ga0114129_10080989
257 Ga0105243_10203138
258 Ga0105243_10265766
259 Ga0105242_10015249
260 Ga0105248_10307169
261 Ga0105249_10002362
262 Ga0105239_10249203
263 Ga0105246_10039483
264 Ga0105246_10163634
265 Ga0157369_10150869
266 Ga0157374_10037677
267 Ga0157374_10157412
268 Ga0157372_10329367
269 Ga0157375_10073653
270 Ga0157375_10079996
271 Ga0157375_10186648
272 Ga0163163_10074361
273 Ga0157380_10040543
274 Ga0157377_10020180
275 Ga0157376_10154766
276 Ga0207643_10010701
277 Ga0207694_10010735
278 Ga0207650_10211065
279 Ga0207659_10017718
280 Ga0207659_10096956
281 Ga0207687_10002080
282 Ga0207687_10068558
283 Ga0207687_10104418
284 Ga0207686_10005469
285 Ga0207709_10159992
286 Ga0207670_10135965
287 Ga0207711_10002714
288 Ga0207661_10007221
289 Ga0207661_10067929
290 Ga0207651_10010889
291 Ga0207703_10033072
292 Ga0207674_10155844
293 Ga0207675_100173458
294 Ga0207428_10000743
295 Ga0207428_10017750
296 Ga0207428_10043429
297 Ga0268265_10249491
298 Ga0307405_10021017
299 Ga0307413_10001750
300 Ga0307413_10008254
301 Ga0307410_10003020
302 Ga0307410_10028582
303 Ga0307410_10078107
304 Ga0307406_10047884
305 Ga0307407_10024710
306 Ga0307412_10022210
307 Ga0307409_100121973
308 Ga0307409_100187429
309 Ga0307416_100003248
310 Ga0307414_10026442
311 Ga0373934_0004102
312 Ga0373934_0059668
313 Ga0373923_0013013
314 Ga0373954_0020038
315 Ga0373954_0021071
316 Ga0373954_0030804
317 Ga0373924_0062733
318 Ga0373935_0072082
319 Ga0373927_0000944
320 Ga0373933_0010268
321 Ga0373937_0003558
322 Ga0373937_0003683
323 Ga0373937_0027453
324 Ga0439439_0016054
325 Ga0451576_0007871
326 Ga0451576_0059760
327 Ga0495603_0046373
328 Ga0495580_0125547
329 Ga0495584_0077525
330 Ga0495643_0037059
331 Ga0495642_0004956
332 Ga0495598_0008304
333 Ga0495609_0009956
334 Ga0495656_0008310
335 Ga0495659_0018366
336 Ga0495599_0009281
337 Ga0495613_0095673
338 Ga0495636_0001985
339 Ga0495676_0032218
340 Ga0495684_0027973
341 Ga0496102_0356023
342 Ga0496109_0095513
343 Ga0496114_0012621
344 Ga0501031_0127425
345 Ga0501042_0102927
346 Ga0501048_0159904
347 Ga0501076_0214010
348 Ga0501081_0111627
349 nmdc:mga05p37_26872_c1
350 nmdc:mga05p37_2872_c1
351 nmdc:mga05p37_30844_c1
352 nmdc:mga05p37_96099_c1
353 nmdc:mga09592_110049_c1
354 nmdc:mga09592_12780_c1
355 nmdc:mga09592_142290_c1
356 nmdc:mga06r32_14712_c1
357 nmdc:mga06r32_15824_c1
358 nmdc:mga06r32_31062_c1
359 nmdc:mga08y16_1458_c1
360 nmdc:mga08y16_200152_c1
361 nmdc:mga08y16_2721_c1
362 nmdc:mga08y16_3877_c1
363 nmdc:mga08y16_498_c1
364 nmdc:mga08y16_65677_c1
365 nmdc:mga0n895_12022_c1
366 nmdc:mga0n895_51937_c1
367 nmdc:mga0n895_58316_c1
368 nmdc:mga0a205_13435_c1
369 Ga0590071_000807
370 Ga0590071_016526
371 Ga0590074_003119
372 Ga0590075_000080
373 Ga0590077_000218
374 Ga0590077_004912
375 Ga0501082_0000262
376 Ga0530510_0082263

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18603

LAL_C2

L-amino acid ligase C-terminal domain 2

360

437

0.97

PF13535

ATP-grasp_4

ATP-grasp domain

142

299

0.93

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

108

292

0.62

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vot-assembly2.cif.gz_B crystal structure of l-amino acid ligase from bacillus licheniformis 0.8169 5 422
3vot-assembly2.cif.gz_B crystal structure of l-amino acid ligase from bacillus licheniformis 0.8093 5 422
3vot-assembly1.cif.gz_A crystal structure of l-amino acid ligase from bacillus licheniformis 0.8066 5 422
3vot-assembly1.cif.gz_A crystal structure of l-amino acid ligase from bacillus licheniformis 0.7994 5 422
1kjj-assembly1.cif.gz_A crystal structure of glycniamide ribonucleotide transformylase in complex with mg-atp-gamma-s 0.7692 1 419
ID Description Score Start End Superfamily
3wo0A03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8534 204 293 3.30.470.20
1js1Z01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase 0.8268 6 37 3.40.50.1370
3se7F02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8258 206 294 3.30.470.20
af_Q4DUM3_2_74_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8151 9 37 3.40.30.10
af_A0A0R0EBC0_105_297_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8141 104 294 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A2V9GD47-F1-model_v4 Carboxylate--amine ligase 0.947 1 337 GO:0005524
GO:0016874
GO:0046872
AF-A0A2V7PHY5-F1-model_v4 ATP-grasp domain-containing protein 0.9432 6 268 GO:0005524
GO:0016874
GO:0046872
AF-A0A2V9BYJ6-F1-model_v4 ATP-grasp domain-containing protein 0.9431 68 231 GO:0005524
GO:0016874
GO:0046872
AF-A0A2V7KN29-F1-model_v4 Phosphoribosylglycinamide synthetase 0.9403 52 431 GO:0005524
GO:0016874
GO:0046872
AF-A0A7V3H4D6-F1-model_v4 ATP-grasp domain-containing protein 0.9389 5 284 GO:0005524
GO:0016874
GO:0046872

Map