F288471
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 187 | 137 | 374 | 315 |
Family's Representative Sequence
| Representative Sequence | 3300053153|Ga0500616_0002168|Ga0500616_0002168_1510_2625 |
| Length | 371 |
| Sequence | MLHRASGNPRNLRIVSLFWNDGPAPFQQHGCHSIGRSLSDALHRVEPQTEEQKIMPLPTDEKRLNLAKEVIQAFDDVGGYHPGHRPAHAKGQLIAGAFTPSAEAASLSKAPHFSTPSTPVIARFSNSTGLPNVPDNDPNVSGPRGLAVRFQLGDHVHTDIVAHSTDGFPARTPQEFLELLRAIHASPPDAPHPNAIEQFLGSHPKALAFVQTPKPIPTSFARETYFSVTAYQFIDAAGTKRHVRYRLIPDAGNAHLDAAGAGAKGPNFLMEELATRLASGPIKMHLWVQIAGEGDIVDDATEHWPADRPQVLLGLITLTALVPNDDAEGKRIIFDPIPRVEGIEPSADPLLEARADVYLTSGRRRRAAAEG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 2 | 3300000546 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled | Metagenome | Rhizosphere |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 20 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 21 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 22 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 23 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 27 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 38 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 39 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 40 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 41 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 63 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 64 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 65 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 66 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 67 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 68 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 69 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 70 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 71 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 72 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 73 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 74 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 110 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 111 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 112 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 113 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 137 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.6 |
| Nodule | 0 |
| Rhizoplane | 4.81 |
| Rhizosphere | 83.96 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.83 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500616_0002168 | 3300053153 | Bacteria | 16973 |
| 2 | LJNas_1001021 | 3300000546 | Bacteria | 4441 |
| 3 | rootH2_10060330 | 3300003320 | Bacteria | 3118 |
| 4 | rootH2_10166019 | 3300003320 | Bacteria | 5383 |
| 5 | Ga0070666_10110316 | 3300005335 | Bacteria | 1902 |
| 6 | Ga0070666_10163067 | 3300005335 | Unclassified | 1558 |
| 7 | Ga0070671_100409806 | 3300005355 | Bacteria | 1160 |
| 8 | Ga0070714_100019059 | 3300005435 | Bacteria | 5583 |
| 9 | Ga0070713_100099416 | 3300005436 | Bacteria | 2517 |
| 10 | Ga0070708_100107045 | 3300005445 | Bacteria | 2567 |
| 11 | Ga0070708_100492106 | 3300005445 | Unclassified | 1157 |
| 12 | Ga0070678_100185565 | 3300005456 | Unclassified | 1706 |
| 13 | Ga0070706_100003154 | 3300005467 | Bacteria | 16293 |
| 14 | Ga0070706_100214169 | 3300005467 | Bacteria | 1798 |
| 15 | Ga0070707_100208574 | 3300005468 | Bacteria | 1905 |
| 16 | Ga0070707_100382404 | 3300005468 | Bacteria | 1367 |
| 17 | Ga0070698_100001834 | 3300005471 | Bacteria | 23658 |
| 18 | Ga0070698_100009274 | 3300005471 | Bacteria | 10558 |
| 19 | Ga0070699_100006978 | 3300005518 | Bacteria | 9816 |
| 20 | Ga0070684_100010730 | 3300005535 | Bacteria | 7271 |
| 21 | Ga0070697_100112745 | 3300005536 | Bacteria | 2268 |
| 22 | Ga0070665_100042099 | 3300005548 | Unclassified | 4590 |
| 23 | Ga0070665_100152507 | 3300005548 | Bacteria | 2313 |
| 24 | Ga0068855_100004454 | 3300005563 | Bacteria | 17115 |
| 25 | Ga0070664_100234520 | 3300005564 | Bacteria | 1646 |
| 26 | Ga0068856_100076591 | 3300005614 | Bacteria | 3314 |
| 27 | Ga0068852_100158995 | 3300005616 | Unclassified | 2108 |
| 28 | Ga0068851_10055980 | 3300005834 | Unclassified | 2010 |
| 29 | Ga0068858_100061905 | 3300005842 | Unclassified | 3460 |
| 30 | Ga0070717_10070344 | 3300006028 | Bacteria | 2916 |
| 31 | Ga0070717_10156015 | 3300006028 | Unclassified | 1978 |
| 32 | Ga0070717_10386740 | 3300006028 | Bacteria | 1255 |
| 33 | Ga0070717_10490880 | 3300006028 | Bacteria | 1109 |
| 34 | Ga0070712_100182156 | 3300006175 | Unclassified | 1638 |
| 35 | Ga0097621_100008331 | 3300006237 | Bacteria | 7461 |
| 36 | Ga0068871_100063857 | 3300006358 | Unclassified | 3013 |
| 37 | Ga0105240_10000406 | 3300009093 | Bacteria | 80007 |
| 38 | Ga0105240_10561484 | 3300009093 | Bacteria | 1261 |
| 39 | Ga0105243_10057917 | 3300009148 | Bacteria | 3087 |
| 40 | Ga0105248_10000049 | 3300009177 | Bacteria | 153741 |
| 41 | Ga0105248_10034265 | 3300009177 | Bacteria | 5676 |
| 42 | Ga0105248_10037156 | 3300009177 | Bacteria | 5447 |
| 43 | Ga0105237_10357700 | 3300009545 | Bacteria | 1464 |
| 44 | Ga0105239_10113394 | 3300010375 | Unclassified | 3006 |
| 45 | Ga0163162_10012804 | 3300013306 | Bacteria | 8196 |
| 46 | Ga0157372_10406091 | 3300013307 | Bacteria | 1587 |
| 47 | Ga0157375_10138469 | 3300013308 | Bacteria | 2559 |
| 48 | Ga0163163_10056808 | 3300014325 | Bacteria | 3868 |
| 49 | Ga0157376_10134024 | 3300014969 | Bacteria | 2214 |
| 50 | Ga0213872_10000828 | 3300021361 | Bacteria | 22431 |
| 51 | Ga0213876_10000946 | 3300021384 | Bacteria | 19108 |
| 52 | Ga0213875_10090539 | 3300021388 | Bacteria | 1427 |
| 53 | Ga0213871_10014206 | 3300021441 | Bacteria | 1885 |
| 54 | Ga0207647_10035495 | 3300025904 | Bacteria | 3177 |
| 55 | Ga0207699_10046704 | 3300025906 | Bacteria | 2535 |
| 56 | Ga0207699_10090336 | 3300025906 | Bacteria | 1921 |
| 57 | Ga0207684_10021678 | 3300025910 | Bacteria | 5485 |
| 58 | Ga0207684_10041241 | 3300025910 | Unclassified | 3915 |
| 59 | Ga0207654_10008561 | 3300025911 | Bacteria | 5181 |
| 60 | Ga0207695_10000505 | 3300025913 | Bacteria | 82918 |
| 61 | Ga0207695_10193461 | 3300025913 | Bacteria | 1951 |
| 62 | Ga0207646_10070912 | 3300025922 | Bacteria | 3112 |
| 63 | Ga0207646_10292043 | 3300025922 | Bacteria | 1473 |
| 64 | Ga0207694_10014162 | 3300025924 | Bacteria | 6013 |
| 65 | Ga0207664_10011276 | 3300025929 | Bacteria | 6341 |
| 66 | Ga0207664_10177116 | 3300025929 | Bacteria | 1829 |
| 67 | Ga0207686_10011127 | 3300025934 | Bacteria | 4918 |
| 68 | Ga0207670_10086599 | 3300025936 | Unclassified | 2205 |
| 69 | Ga0207711_10000033 | 3300025941 | Bacteria | 193513 |
| 70 | Ga0207711_10003940 | 3300025941 | Bacteria | 12769 |
| 71 | Ga0207711_10021052 | 3300025941 | Bacteria | 5447 |
| 72 | Ga0207711_10085226 | 3300025941 | Bacteria | 2768 |
| 73 | Ga0207661_10034338 | 3300025944 | Bacteria | 3943 |
| 74 | Ga0207679_10426459 | 3300025945 | Bacteria | 1171 |
| 75 | Ga0207667_10020335 | 3300025949 | Bacteria | 7388 |
| 76 | Ga0207668_10077678 | 3300025972 | Bacteria | 2395 |
| 77 | Ga0207703_10031781 | 3300026035 | Bacteria | 4175 |
| 78 | Ga0207702_10126802 | 3300026078 | Bacteria | 2292 |
| 79 | Ga0207683_10111226 | 3300026121 | Unclassified | 2453 |
| 80 | Ga0207698_10028739 | 3300026142 | Unclassified | 3970 |
| 81 | Ga0268266_10019072 | 3300028379 | Bacteria | 5842 |
| 82 | Ga0268266_10085174 | 3300028379 | Bacteria | 2761 |
| 83 | Ga0265332_10029379 | 3300031238 | Bacteria | 2404 |
| 84 | Ga0307510_10032306 | 3300033180 | Bacteria | 5898 |
| 85 | Ga0307510_10050653 | 3300033180 | Bacteria | 4402 |
| 86 | Ga0373926_0035066 | 3300035083 | Bacteria | 1778 |
| 87 | Ga0373953_0053831 | 3300035117 | Bacteria | 1632 |
| 88 | Ga0373954_0011000 | 3300035118 | Bacteria | 4003 |
| 89 | Ga0373935_0016906 | 3300035692 | Bacteria | 4418 |
| 90 | Ga0373935_0046541 | 3300035692 | Bacteria | 2740 |
| 91 | Ga0373935_0169210 | 3300035692 | Bacteria | 1494 |
| 92 | Ga0373927_0049820 | 3300035695 | Bacteria | 2707 |
| 93 | Ga0373925_0271637 | 3300037068 | Bacteria | 1364 |
| 94 | Ga0436364_0059479 | 3300037853 | Bacteria | 5780 |
| 95 | Ga0436364_0268646 | 3300037853 | Bacteria | 1843 |
| 96 | Ga0436364_1135738 | 3300037853 | Unclassified | 2878 |
| 97 | Ga0436365_0136606 | 3300039437 | Unclassified | 4457 |
| 98 | Ga0436365_1239780 | 3300039437 | Bacteria | 1066 |
| 99 | Ga0436365_1489260 | 3300039437 | Bacteria | 25872 |
| 100 | Ga0436365_1612288 | 3300039437 | Unclassified | 2749 |
| 101 | Ga0436365_1780078 | 3300039437 | Bacteria | 2250 |
| 102 | Ga0436360_0115372 | 3300039438 | Bacteria | 14487 |
| 103 | Ga0436360_0354409 | 3300039438 | Bacteria | 1738 |
| 104 | Ga0436360_1003620 | 3300039438 | Bacteria | 2553 |
| 105 | Ga0436360_1196102 | 3300039438 | Bacteria | 7644 |
| 106 | Ga0436361_0138231 | 3300039447 | Bacteria | 3355 |
| 107 | Ga0436361_0214738 | 3300039447 | Bacteria | 4576 |
| 108 | Ga0436361_0694805 | 3300039447 | Bacteria | 2391 |
| 109 | Ga0436363_0806074 | 3300039450 | Unclassified | 4841 |
| 110 | Ga0495603_0094496 | 3300046455 | Bacteria | 1747 |
| 111 | Ga0495629_0007001 | 3300046459 | Bacteria | 8307 |
| 112 | Ga0495629_0017148 | 3300046459 | Bacteria | 5195 |
| 113 | Ga0495651_0007936 | 3300046462 | Bacteria | 8131 |
| 114 | Ga0495651_0110624 | 3300046462 | Bacteria | 2032 |
| 115 | Ga0495651_0150347 | 3300046462 | Bacteria | 1679 |
| 116 | Ga0495653_0025678 | 3300046463 | Bacteria | 4729 |
| 117 | Ga0495650_0000029 | 3300046471 | Bacteria | 453466 |
| 118 | Ga0495580_0011580 | 3300046472 | Bacteria | 6822 |
| 119 | Ga0495580_0199985 | 3300046472 | Bacteria | 1377 |
| 120 | Ga0495582_0005719 | 3300046473 | Bacteria | 6926 |
| 121 | Ga0495582_0038064 | 3300046473 | Bacteria | 2646 |
| 122 | Ga0495662_0054168 | 3300046476 | Bacteria | 1937 |
| 123 | Ga0495594_0001942 | 3300046499 | Bacteria | 10777 |
| 124 | Ga0495628_0044123 | 3300046516 | Bacteria | 3548 |
| 125 | Ga0495666_0003218 | 3300046526 | Bacteria | 8228 |
| 126 | Ga0495652_0078917 | 3300046529 | Bacteria | 2723 |
| 127 | Ga0495665_0021690 | 3300046531 | Bacteria | 3453 |
| 128 | Ga0495640_0042105 | 3300046533 | Bacteria | 3188 |
| 129 | Ga0495586_0008794 | 3300046535 | Bacteria | 5378 |
| 130 | Ga0495645_0006451 | 3300046543 | Bacteria | 8138 |
| 131 | Ga0495645_0012284 | 3300046543 | Bacteria | 6031 |
| 132 | Ga0495622_0021727 | 3300046557 | Bacteria | 2988 |
| 133 | Ga0495634_0005646 | 3300046642 | Bacteria | 9582 |
| 134 | Ga0495635_0259043 | 3300046663 | Unclassified | 1171 |
| 135 | Ga0495657_0188979 | 3300046675 | Unclassified | 1260 |
| 136 | Ga0495599_0006198 | 3300046678 | Bacteria | 7209 |
| 137 | Ga0495623_0031059 | 3300046679 | Bacteria | 3436 |
| 138 | Ga0495613_0004590 | 3300046689 | Bacteria | 10363 |
| 139 | Ga0495624_0116302 | 3300046690 | Bacteria | 1643 |
| 140 | Ga0495600_0004600 | 3300046809 | Bacteria | 8265 |
| 141 | Ga0495581_0144532 | 3300047315 | Bacteria | 1388 |
| 142 | Ga0495676_0001600 | 3300047321 | Bacteria | 19649 |
| 143 | Ga0495680_0028629 | 3300047322 | Bacteria | 4567 |
| 144 | Ga0495675_0030398 | 3300047444 | Bacteria | 3447 |
| 145 | Ga0495684_0305576 | 3300047471 | Unclassified | 1141 |
| 146 | Ga0495686_0000009 | 3300047472 | Bacteria | 661643 |
| 147 | Ga0495686_0004190 | 3300047472 | Bacteria | 11975 |
| 148 | Ga0495686_0007752 | 3300047472 | Bacteria | 7998 |
| 149 | Ga0495686_0037584 | 3300047472 | Bacteria | 3101 |
| 150 | Ga0496104_0003683 | 3300048907 | Bacteria | 13227 |
| 151 | Ga0496105_0158653 | 3300048908 | Unclassified | 1857 |
| 152 | Ga0496105_0239881 | 3300048908 | Bacteria | 1471 |
| 153 | Ga0496108_0023325 | 3300048911 | Bacteria | 5090 |
| 154 | Ga0496108_0151323 | 3300048911 | Bacteria | 2002 |
| 155 | Ga0496109_0040300 | 3300048912 | Bacteria | 4230 |
| 156 | Ga0496111_0006803 | 3300048914 | Bacteria | 7454 |
| 157 | Ga0496113_0063348 | 3300048916 | Bacteria | 2794 |
| 158 | Ga0496114_0270119 | 3300048917 | Unclassified | 1498 |
| 159 | Ga0496126_0000014 | 3300048929 | Bacteria | 686881 |
| 160 | Ga0496126_0002467 | 3300048929 | Bacteria | 24929 |
| 161 | Ga0496126_0089010 | 3300048929 | Bacteria | 2718 |
| 162 | Ga0501031_0005413 | 3300049568 | Bacteria | 8310 |
| 163 | Ga0501032_0004952 | 3300049569 | Bacteria | 9962 |
| 164 | Ga0501033_0015079 | 3300049570 | Bacteria | 5863 |
| 165 | Ga0501034_0225905 | 3300049571 | Viruses | 1823 |
| 166 | Ga0501036_0001743 | 3300049572 | Bacteria | 16890 |
| 167 | Ga0501037_0032026 | 3300049573 | Bacteria | 3881 |
| 168 | Ga0501038_0009802 | 3300049574 | Bacteria | 8771 |
| 169 | Ga0501039_0011641 | 3300049575 | Bacteria | 6699 |
| 170 | Ga0501046_0005333 | 3300049580 | Bacteria | 11501 |
| 171 | Ga0501047_0069597 | 3300049581 | Bacteria | 3388 |
| 172 | Ga0501048_0010420 | 3300049582 | Bacteria | 6942 |
| 173 | Ga0501068_0001102 | 3300049584 | Bacteria | 14311 |
| 174 | Ga0501069_0214103 | 3300049585 | Bacteria | 1118 |
| 175 | Ga0501070_0022392 | 3300049586 | Bacteria | 5292 |
| 176 | Ga0501072_0000310 | 3300049588 | Bacteria | 34597 |
| 177 | Ga0501073_0006016 | 3300049589 | Bacteria | 9052 |
| 178 | Ga0501074_0010782 | 3300049590 | Bacteria | 6636 |
| 179 | Ga0501077_0002588 | 3300049593 | Bacteria | 10841 |
| 180 | Ga0501079_0021554 | 3300049741 | Bacteria | 4928 |
| 181 | Ga0501080_0000718 | 3300049742 | Bacteria | 26691 |
| 182 | Ga0501083_0075730 | 3300049744 | Bacteria | 2234 |
| 183 | nmdc:mga06r32_392090_c1 | 3300050510 | Bacteria | 1371 |
| 184 | Ga0495601_0207922 | 3300053077 | Bacteria | 1279 |
| 185 | Ga0500595_011083 | 3300053119 | Bacteria | 3547 |
| 186 | Ga0500595_015391 | 3300053119 | Bacteria | 2873 |
| 187 | Ga0501082_0346588 | 3300060353 | Bacteria | 1294 |
| 188 | Ga0500616_0002168 | |||
| 189 | LJNas_1001021 | |||
| 190 | rootH2_10060330 | |||
| 191 | rootH2_10166019 | |||
| 192 | Ga0070666_10110316 | |||
| 193 | Ga0070666_10163067 | |||
| 194 | Ga0070671_100409806 | |||
| 195 | Ga0070714_100019059 | |||
| 196 | Ga0070713_100099416 | |||
| 197 | Ga0070708_100107045 | |||
| 198 | Ga0070708_100492106 | |||
| 199 | Ga0070678_100185565 | |||
| 200 | Ga0070706_100003154 | |||
| 201 | Ga0070706_100214169 | |||
| 202 | Ga0070707_100208574 | |||
| 203 | Ga0070707_100382404 | |||
| 204 | Ga0070698_100001834 | |||
| 205 | Ga0070698_100009274 | |||
| 206 | Ga0070699_100006978 | |||
| 207 | Ga0070684_100010730 | |||
| 208 | Ga0070697_100112745 | |||
| 209 | Ga0070665_100042099 | |||
| 210 | Ga0070665_100152507 | |||
| 211 | Ga0068855_100004454 | |||
| 212 | Ga0070664_100234520 | |||
| 213 | Ga0068856_100076591 | |||
| 214 | Ga0068852_100158995 | |||
| 215 | Ga0068851_10055980 | |||
| 216 | Ga0068858_100061905 | |||
| 217 | Ga0070717_10070344 | |||
| 218 | Ga0070717_10156015 | |||
| 219 | Ga0070717_10386740 | |||
| 220 | Ga0070717_10490880 | |||
| 221 | Ga0070712_100182156 | |||
| 222 | Ga0097621_100008331 | |||
| 223 | Ga0068871_100063857 | |||
| 224 | Ga0105240_10000406 | |||
| 225 | Ga0105240_10561484 | |||
| 226 | Ga0105243_10057917 | |||
| 227 | Ga0105248_10000049 | |||
| 228 | Ga0105248_10034265 | |||
| 229 | Ga0105248_10037156 | |||
| 230 | Ga0105237_10357700 | |||
| 231 | Ga0105239_10113394 | |||
| 232 | Ga0163162_10012804 | |||
| 233 | Ga0157372_10406091 | |||
| 234 | Ga0157375_10138469 | |||
| 235 | Ga0163163_10056808 | |||
| 236 | Ga0157376_10134024 | |||
| 237 | Ga0213872_10000828 | |||
| 238 | Ga0213876_10000946 | |||
| 239 | Ga0213875_10090539 | |||
| 240 | Ga0213871_10014206 | |||
| 241 | Ga0207647_10035495 | |||
| 242 | Ga0207699_10046704 | |||
| 243 | Ga0207699_10090336 | |||
| 244 | Ga0207684_10021678 | |||
| 245 | Ga0207684_10041241 | |||
| 246 | Ga0207654_10008561 | |||
| 247 | Ga0207695_10000505 | |||
| 248 | Ga0207695_10193461 | |||
| 249 | Ga0207646_10070912 | |||
| 250 | Ga0207646_10292043 | |||
| 251 | Ga0207694_10014162 | |||
| 252 | Ga0207664_10011276 | |||
| 253 | Ga0207664_10177116 | |||
| 254 | Ga0207686_10011127 | |||
| 255 | Ga0207670_10086599 | |||
| 256 | Ga0207711_10000033 | |||
| 257 | Ga0207711_10003940 | |||
| 258 | Ga0207711_10021052 | |||
| 259 | Ga0207711_10085226 | |||
| 260 | Ga0207661_10034338 | |||
| 261 | Ga0207679_10426459 | |||
| 262 | Ga0207667_10020335 | |||
| 263 | Ga0207668_10077678 | |||
| 264 | Ga0207703_10031781 | |||
| 265 | Ga0207702_10126802 | |||
| 266 | Ga0207683_10111226 | |||
| 267 | Ga0207698_10028739 | |||
| 268 | Ga0268266_10019072 | |||
| 269 | Ga0268266_10085174 | |||
| 270 | Ga0265332_10029379 | |||
| 271 | Ga0307510_10032306 | |||
| 272 | Ga0307510_10050653 | |||
| 273 | Ga0373926_0035066 | |||
| 274 | Ga0373953_0053831 | |||
| 275 | Ga0373954_0011000 | |||
| 276 | Ga0373935_0016906 | |||
| 277 | Ga0373935_0046541 | |||
| 278 | Ga0373935_0169210 | |||
| 279 | Ga0373927_0049820 | |||
| 280 | Ga0373925_0271637 | |||
| 281 | Ga0436364_0059479 | |||
| 282 | Ga0436364_0268646 | |||
| 283 | Ga0436364_1135738 | |||
| 284 | Ga0436365_0136606 | |||
| 285 | Ga0436365_1239780 | |||
| 286 | Ga0436365_1489260 | |||
| 287 | Ga0436365_1612288 | |||
| 288 | Ga0436365_1780078 | |||
| 289 | Ga0436360_0115372 | |||
| 290 | Ga0436360_0354409 | |||
| 291 | Ga0436360_1003620 | |||
| 292 | Ga0436360_1196102 | |||
| 293 | Ga0436361_0138231 | |||
| 294 | Ga0436361_0214738 | |||
| 295 | Ga0436361_0694805 | |||
| 296 | Ga0436363_0806074 | |||
| 297 | Ga0495603_0094496 | |||
| 298 | Ga0495629_0007001 | |||
| 299 | Ga0495629_0017148 | |||
| 300 | Ga0495651_0007936 | |||
| 301 | Ga0495651_0110624 | |||
| 302 | Ga0495651_0150347 | |||
| 303 | Ga0495653_0025678 | |||
| 304 | Ga0495650_0000029 | |||
| 305 | Ga0495580_0011580 | |||
| 306 | Ga0495580_0199985 | |||
| 307 | Ga0495582_0005719 | |||
| 308 | Ga0495582_0038064 | |||
| 309 | Ga0495662_0054168 | |||
| 310 | Ga0495594_0001942 | |||
| 311 | Ga0495628_0044123 | |||
| 312 | Ga0495666_0003218 | |||
| 313 | Ga0495652_0078917 | |||
| 314 | Ga0495665_0021690 | |||
| 315 | Ga0495640_0042105 | |||
| 316 | Ga0495586_0008794 | |||
| 317 | Ga0495645_0006451 | |||
| 318 | Ga0495645_0012284 | |||
| 319 | Ga0495622_0021727 | |||
| 320 | Ga0495634_0005646 | |||
| 321 | Ga0495635_0259043 | |||
| 322 | Ga0495657_0188979 | |||
| 323 | Ga0495599_0006198 | |||
| 324 | Ga0495623_0031059 | |||
| 325 | Ga0495613_0004590 | |||
| 326 | Ga0495624_0116302 | |||
| 327 | Ga0495600_0004600 | |||
| 328 | Ga0495581_0144532 | |||
| 329 | Ga0495676_0001600 | |||
| 330 | Ga0495680_0028629 | |||
| 331 | Ga0495675_0030398 | |||
| 332 | Ga0495684_0305576 | |||
| 333 | Ga0495686_0000009 | |||
| 334 | Ga0495686_0004190 | |||
| 335 | Ga0495686_0007752 | |||
| 336 | Ga0495686_0037584 | |||
| 337 | Ga0496104_0003683 | |||
| 338 | Ga0496105_0158653 | |||
| 339 | Ga0496105_0239881 | |||
| 340 | Ga0496108_0023325 | |||
| 341 | Ga0496108_0151323 | |||
| 342 | Ga0496109_0040300 | |||
| 343 | Ga0496111_0006803 | |||
| 344 | Ga0496113_0063348 | |||
| 345 | Ga0496114_0270119 | |||
| 346 | Ga0496126_0000014 | |||
| 347 | Ga0496126_0002467 | |||
| 348 | Ga0496126_0089010 | |||
| 349 | Ga0501031_0005413 | |||
| 350 | Ga0501032_0004952 | |||
| 351 | Ga0501033_0015079 | |||
| 352 | Ga0501034_0225905 | |||
| 353 | Ga0501036_0001743 | |||
| 354 | Ga0501037_0032026 | |||
| 355 | Ga0501038_0009802 | |||
| 356 | Ga0501039_0011641 | |||
| 357 | Ga0501046_0005333 | |||
| 358 | Ga0501047_0069597 | |||
| 359 | Ga0501048_0010420 | |||
| 360 | Ga0501068_0001102 | |||
| 361 | Ga0501069_0214103 | |||
| 362 | Ga0501070_0022392 | |||
| 363 | Ga0501072_0000310 | |||
| 364 | Ga0501073_0006016 | |||
| 365 | Ga0501074_0010782 | |||
| 366 | Ga0501077_0002588 | |||
| 367 | Ga0501079_0021554 | |||
| 368 | Ga0501080_0000718 | |||
| 369 | Ga0501083_0075730 | |||
| 370 | nmdc:mga06r32_392090_c1 | |||
| 371 | Ga0495601_0207922 | |||
| 372 | Ga0500595_011083 | |||
| 373 | Ga0500595_015391 | |||
| 374 | Ga0501082_0346588 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3e4y-assembly1.cif.gz_A | crystal structure of a 33kda catalase-related protein from mycobacterium avium subsp. paratuberculosis. i2(1)2(1)2(1) crystal form | 0.8966 | 13 | 313 |
| 3e4y-assembly1.cif.gz_A | crystal structure of a 33kda catalase-related protein from mycobacterium avium subsp. paratuberculosis. i2(1)2(1)2(1) crystal form | 0.8852 | 13 | 313 |
| 2xq1-assembly1.cif.gz_M | crystal structure of peroxisomal catalase from the yeast hansenula polymorpha | 0.8604 | 34 | 310 |
| 1a4e-assembly1.cif.gz_D | catalase a from saccharomyces cerevisiae | 0.8596 | 34 | 310 |
| 2xq1-assembly2.cif.gz_B | crystal structure of peroxisomal catalase from the yeast hansenula polymorpha | 0.8582 | 34 | 310 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3e4wB02 | Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain | 0.9287 | 38 | 293 | 2.40.180.10 |
| 3e4wB02 | Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain | 0.9201 | 38 | 293 | 2.40.180.10 |
| af_O77229_3_489_2.40.180.10 | Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain | 0.8534 | 34 | 310 | 2.40.180.10 |
| 4cabB00 | Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain | 0.8497 | 34 | 311 | 2.40.180.10 |
| 4bflD01 | Mainly Beta;Beta Barrel;Catalase HpII,;Catalase core domain | 0.8465 | 34 | 312 | 2.40.180.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A165D1D0-F1-model_v4 | Heme-dependent catalase | 0.9853 | 139 | 313 |
GO:0004096
GO:0020037 |
| AF-A0A3D1CIA5-F1-model_v4 | Catalase | 0.9797 | 149 | 310 |
GO:0004096
GO:0005777 GO:0020037 GO:0042542 GO:0042744 |
| AF-W0UZK4-F1-model_v4 | Catalase domain protein | 0.9712 | 174 | 311 |
GO:0004096
GO:0020037 |
| AF-A0A7D8UKW2-F1-model_v4 | Catalase-related peroxidase | 0.9642 | 170 | 313 |
GO:0004096
GO:0005739 GO:0005777 GO:0020037 GO:0042542 GO:0042744 |
| AF-A0A2V7JFM4-F1-model_v4 | Catalase | 0.964 | 92 | 310 |
GO:0004096
GO:0005737 GO:0020037 GO:0042542 GO:0042744 |