F287442
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 187 | 140 | 187 | 385 |
Family's Representative Sequence
| Representative Sequence | 3300006048|Ga0075363_100017829|Ga0075363_1000178293 |
| Length | 406 |
| Sequence | MIHEDCELSGNTAKNSSAKSIEKKLDFATRCIHAGQIPDPSTGALITPIYATSTYAQKSPGVHQGFEYSRTQNPTRFAYERCIADLENGQAGFAFASGMAAINTLLELLNPGDHIIGMDDLYGGTVRLFNQIKQRSSNLSFSYVDMTDLNNLIKQIKPETKLLWMESPTNPLLKLVDIQQVVKIARQHKLITVLDNTFATPWIQQPLTLGCDLVVHSATKYLNGHSDMVGGIVVVGENAELIEKITYLQNAMGAIQGPFDSFLALRGLHTLALRMQRHCENALKIAQFLEQHNKIEKVFYPGLASHPQHELAKKQMHNRFGGIVSFVLQGDLEETQHFIERCHLFTLAESLGCVESLVDHPAIMTHAALPIETRERLGITDTLLRLSVGIEAVQDLIDDLEHGLTF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 28 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 29 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 30 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 32 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 33 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 34 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 35 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 36 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 37 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 38 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 39 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 40 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 41 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 43 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 60 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 61 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 62 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 63 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 64 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 91 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 92 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 94 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 95 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 96 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 97 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 98 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 99 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 100 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 101 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 102 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 103 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 104 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 105 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 106 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 107 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 108 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 109 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 110 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 111 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 112 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 118 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 119 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 120 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 128 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 129 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 130 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 131 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 132 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 139 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.02 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 79.14 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.83 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10277702 | 3300005327 | Bacteria | 1425 |
| 2 | Ga0070683_100000068 | 3300005329 | Bacteria | 72997 |
| 3 | Ga0070670_100000307 | 3300005331 | Bacteria | 42018 |
| 4 | Ga0070670_100132903 | 3300005331 | Bacteria | 2150 |
| 5 | Ga0070680_100034243 | 3300005336 | Bacteria | 4095 |
| 6 | Ga0070682_100000001 | 3300005337 | Bacteria | 569837 |
| 7 | Ga0068868_100000457 | 3300005338 | Bacteria | 27178 |
| 8 | Ga0068868_100000947 | 3300005338 | Bacteria | 19739 |
| 9 | Ga0070660_100133188 | 3300005339 | Bacteria | 1990 |
| 10 | Ga0070689_100009202 | 3300005340 | Bacteria | 6992 |
| 11 | Ga0070661_100081099 | 3300005344 | Bacteria | 2395 |
| 12 | Ga0070675_100000048 | 3300005354 | Bacteria | 73894 |
| 13 | Ga0070709_10060369 | 3300005434 | Bacteria | 2410 |
| 14 | Ga0070713_100029590 | 3300005436 | Bacteria | 4340 |
| 15 | Ga0070701_10032283 | 3300005438 | Bacteria | 2606 |
| 16 | Ga0070700_100000025 | 3300005441 | Bacteria | 126198 |
| 17 | Ga0070694_100009242 | 3300005444 | Bacteria | 6048 |
| 18 | Ga0070708_100001348 | 3300005445 | Bacteria | 18754 |
| 19 | Ga0070681_10071579 | 3300005458 | Bacteria | 3432 |
| 20 | Ga0070706_100037057 | 3300005467 | Bacteria | 4505 |
| 21 | Ga0070707_100029747 | 3300005468 | Bacteria | 5198 |
| 22 | Ga0070707_100159322 | 3300005468 | Bacteria | 2199 |
| 23 | Ga0070698_100120772 | 3300005471 | Bacteria | 2581 |
| 24 | Ga0070698_100346498 | 3300005471 | Bacteria | 1417 |
| 25 | Ga0070699_100070547 | 3300005518 | Bacteria | 3037 |
| 26 | Ga0070684_100000096 | 3300005535 | Bacteria | 56546 |
| 27 | Ga0070672_100000911 | 3300005543 | Bacteria | 17713 |
| 28 | Ga0070695_100016982 | 3300005545 | Bacteria | 4413 |
| 29 | Ga0070664_100057879 | 3300005564 | Bacteria | 3296 |
| 30 | Ga0068854_100329295 | 3300005578 | Bacteria | 1244 |
| 31 | Ga0068859_100083862 | 3300005617 | Bacteria | 3231 |
| 32 | Ga0068864_100000091 | 3300005618 | Bacteria | 96169 |
| 33 | Ga0068858_100002023 | 3300005842 | Bacteria | 20688 |
| 34 | Ga0070717_10000082 | 3300006028 | Bacteria | 77627 |
| 35 | Ga0070717_10044078 | 3300006028 | Bacteria | 3643 |
| 36 | Ga0070717_10177689 | 3300006028 | Bacteria | 1854 |
| 37 | Ga0075365_10001426 | 3300006038 | Bacteria | 10804 |
| 38 | Ga0075363_100017829 | 3300006048 | Bacteria | 3528 |
| 39 | Ga0075364_10000841 | 3300006051 | Bacteria | 16160 |
| 40 | Ga0075367_10005521 | 3300006178 | Bacteria | 6292 |
| 41 | Ga0075369_10000562 | 3300006186 | Bacteria | 11725 |
| 42 | Ga0075370_10001310 | 3300006353 | Bacteria | 10647 |
| 43 | Ga0075428_100014612 | 3300006844 | Bacteria | 8721 |
| 44 | Ga0075428_100321363 | 3300006844 | Bacteria | 1663 |
| 45 | Ga0075431_100017421 | 3300006847 | Bacteria | 7300 |
| 46 | Ga0075429_100002963 | 3300006880 | Bacteria | 14405 |
| 47 | Ga0075429_100302999 | 3300006880 | Bacteria | 1399 |
| 48 | Ga0075436_100012336 | 3300006914 | Bacteria | 5856 |
| 49 | Ga0097620_100083859 | 3300006931 | Bacteria | 3231 |
| 50 | Ga0075435_100001359 | 3300007076 | Bacteria | 15770 |
| 51 | Ga0075435_100024790 | 3300007076 | Bacteria | 4661 |
| 52 | Ga0105244_10009694 | 3300009036 | Bacteria | 5893 |
| 53 | Ga0105240_10035645 | 3300009093 | Bacteria | 6409 |
| 54 | Ga0105245_10000226 | 3300009098 | Bacteria | 53639 |
| 55 | Ga0105245_10000463 | 3300009098 | Bacteria | 37232 |
| 56 | Ga0114129_10177328 | 3300009147 | Bacteria | 2902 |
| 57 | Ga0114129_10428875 | 3300009147 | Bacteria | 1737 |
| 58 | Ga0105242_10002139 | 3300009176 | Bacteria | 15595 |
| 59 | Ga0105238_10000001 | 3300009551 | Bacteria | 2036163 |
| 60 | Ga0105239_10016894 | 3300010375 | Bacteria | 8065 |
| 61 | Ga0157373_10000162 | 3300013100 | Bacteria | 54140 |
| 62 | Ga0157373_10003016 | 3300013100 | Bacteria | 12717 |
| 63 | Ga0157369_10000539 | 3300013105 | Bacteria | 50071 |
| 64 | Ga0157374_10000012 | 3300013296 | Bacteria | 462353 |
| 65 | Ga0157378_10027218 | 3300013297 | Bacteria | 5046 |
| 66 | Ga0157378_10057053 | 3300013297 | Bacteria | 3480 |
| 67 | Ga0157378_10058374 | 3300013297 | Bacteria | 3441 |
| 68 | Ga0163162_10035945 | 3300013306 | Bacteria | 4935 |
| 69 | Ga0163162_10292271 | 3300013306 | Bacteria | 1761 |
| 70 | Ga0157375_10000008 | 3300013308 | Bacteria | 373560 |
| 71 | Ga0157375_10000146 | 3300013308 | Bacteria | 69095 |
| 72 | Ga0157375_10000381 | 3300013308 | Bacteria | 40495 |
| 73 | Ga0157375_10237361 | 3300013308 | Bacteria | 1982 |
| 74 | Ga0157380_10020244 | 3300014326 | Bacteria | 4972 |
| 75 | Ga0157377_10000002 | 3300014745 | Bacteria | 473827 |
| 76 | Ga0157377_10000024 | 3300014745 | Bacteria | 142391 |
| 77 | Ga0157377_10060491 | 3300014745 | Bacteria | 2162 |
| 78 | Ga0157376_10000025 | 3300014969 | Bacteria | 214212 |
| 79 | Ga0182005_1000545 | 3300015265 | Bacteria | 18993 |
| 80 | Ga0213873_10000002 | 3300021358 | Bacteria | 1164195 |
| 81 | Ga0213873_10027136 | 3300021358 | Bacteria | 1395 |
| 82 | Ga0213872_10000378 | 3300021361 | Bacteria | 37429 |
| 83 | Ga0213876_10000001 | 3300021384 | Bacteria | 1186326 |
| 84 | Ga0213876_10000080 | 3300021384 | Bacteria | 109125 |
| 85 | Ga0213876_10003017 | 3300021384 | Bacteria | 9738 |
| 86 | Ga0213876_10032932 | 3300021384 | Bacteria | 2732 |
| 87 | Ga0213875_10000002 | 3300021388 | Bacteria | 921066 |
| 88 | Ga0213875_10000076 | 3300021388 | Bacteria | 117309 |
| 89 | Ga0213875_10016778 | 3300021388 | Bacteria | 3546 |
| 90 | Ga0207699_10159229 | 3300025906 | Bacteria | 1501 |
| 91 | Ga0207705_10186924 | 3300025909 | Bacteria | 1565 |
| 92 | Ga0207684_10111363 | 3300025910 | Bacteria | 2343 |
| 93 | Ga0207707_10091954 | 3300025912 | Bacteria | 2651 |
| 94 | Ga0207695_10056364 | 3300025913 | Bacteria | 4089 |
| 95 | Ga0207660_10011112 | 3300025917 | Bacteria | 5853 |
| 96 | Ga0207649_10108282 | 3300025920 | Bacteria | 1852 |
| 97 | Ga0207649_10168411 | 3300025920 | Bacteria | 1524 |
| 98 | Ga0207646_10331089 | 3300025922 | Bacteria | 1376 |
| 99 | Ga0207694_10000001 | 3300025924 | Bacteria | 4078485 |
| 100 | Ga0207650_10000262 | 3300025925 | Bacteria | 56131 |
| 101 | Ga0207650_10313491 | 3300025925 | Bacteria | 1283 |
| 102 | Ga0207659_10000007 | 3300025926 | Bacteria | 322984 |
| 103 | Ga0207687_10000003 | 3300025927 | Bacteria | 875159 |
| 104 | Ga0207687_10000773 | 3300025927 | Bacteria | 21591 |
| 105 | Ga0207687_10001038 | 3300025927 | Bacteria | 18878 |
| 106 | Ga0207687_10106577 | 3300025927 | Bacteria | 2072 |
| 107 | Ga0207686_10004299 | 3300025934 | Bacteria | 7637 |
| 108 | Ga0207670_10001162 | 3300025936 | Bacteria | 13880 |
| 109 | Ga0207665_10141937 | 3300025939 | Bacteria | 1714 |
| 110 | Ga0207691_10000269 | 3300025940 | Bacteria | 51350 |
| 111 | Ga0207661_10000001 | 3300025944 | Bacteria | 937688 |
| 112 | Ga0207679_10043481 | 3300025945 | Bacteria | 3235 |
| 113 | Ga0207651_10032994 | 3300025960 | Bacteria | 3333 |
| 114 | Ga0207640_10069414 | 3300025981 | Bacteria | 2366 |
| 115 | Ga0207677_10000045 | 3300026023 | Bacteria | 106591 |
| 116 | Ga0207677_10000633 | 3300026023 | Bacteria | 21255 |
| 117 | Ga0207703_10000104 | 3300026035 | Bacteria | 99914 |
| 118 | Ga0207639_10000051 | 3300026041 | Bacteria | 113927 |
| 119 | Ga0207639_10114341 | 3300026041 | Bacteria | 2206 |
| 120 | Ga0207708_10000052 | 3300026075 | Bacteria | 105169 |
| 121 | Ga0207676_10000013 | 3300026095 | Bacteria | 343067 |
| 122 | Ga0207675_100107666 | 3300026118 | Bacteria | 2628 |
| 123 | Ga0265334_10000060 | 3300028573 | Bacteria | 79219 |
| 124 | Ga0307517_10009198 | 3300028786 | Bacteria | 14052 |
| 125 | Ga0265338_10020049 | 3300028800 | Bacteria | 7052 |
| 126 | Ga0265338_10051460 | 3300028800 | Bacteria | 3708 |
| 127 | Ga0265325_10071746 | 3300031241 | Bacteria | 1737 |
| 128 | Ga0265325_10091973 | 3300031241 | Unclassified | 1495 |
| 129 | Ga0265327_10000240 | 3300031251 | Bacteria | 109753 |
| 130 | Ga0307513_10041662 | 3300031456 | Bacteria | 5065 |
| 131 | Ga0307412_10000422 | 3300031911 | Bacteria | 25696 |
| 132 | Ga0307510_10058595 | 3300033180 | Bacteria | 3985 |
| 133 | Ga0373935_0078237 | 3300035692 | Bacteria | 2145 |
| 134 | Ga0373947_0105904 | 3300035725 | Bacteria | 1772 |
| 135 | Ga0373925_0269194 | 3300037068 | Bacteria | 1370 |
| 136 | Ga0395900_0123724 | 3300037418 | Bacteria | 2653 |
| 137 | Ga0395905_0116867 | 3300037471 | Bacteria | 2507 |
| 138 | Ga0436364_0612043 | 3300037853 | Bacteria | 326330 |
| 139 | Ga0436364_0714588 | 3300037853 | Bacteria | 3550 |
| 140 | Ga0436364_0871624 | 3300037853 | Bacteria | 117373 |
| 141 | Ga0436364_1158872 | 3300037853 | Bacteria | 16532 |
| 142 | Ga0436364_1355754 | 3300037853 | Bacteria | 1674 |
| 143 | Ga0436365_0404975 | 3300039437 | Bacteria | 180420 |
| 144 | Ga0436365_0978685 | 3300039437 | Bacteria | 7683 |
| 145 | Ga0436365_1042710 | 3300039437 | Bacteria | 18422 |
| 146 | Ga0436365_1645708 | 3300039437 | Bacteria | 58473 |
| 147 | Ga0436361_0786779 | 3300039447 | Bacteria | 144856 |
| 148 | Ga0436363_1064427 | 3300039450 | Bacteria | 1322 |
| 149 | Ga0436362_0459924 | 3300039453 | Bacteria | 2431 |
| 150 | Ga0436362_0660519 | 3300039453 | Bacteria | 832172 |
| 151 | Ga0451577_0000971 | 3300042876 | Bacteria | 41922 |
| 152 | Ga0453683_0085928 | 3300044673 | Bacteria | 1971 |
| 153 | Ga0453684_0002850 | 3300044712 | Bacteria | 40670 |
| 154 | Ga0451576_0334265 | 3300045051 | Bacteria | 1586 |
| 155 | Ga0495606_0014455 | 3300046507 | Bacteria | 6159 |
| 156 | Ga0495620_0000908 | 3300046515 | Bacteria | 18186 |
| 157 | Ga0495611_0000023 | 3300046648 | Bacteria | 120553 |
| 158 | Ga0495670_0005707 | 3300046691 | Bacteria | 6104 |
| 159 | Ga0495679_017789 | 3300047446 | Bacteria | 2538 |
| 160 | Ga0496122_0033714 | 3300048925 | Bacteria | 4205 |
| 161 | Ga0496123_0044382 | 3300048926 | Bacteria | 3040 |
| 162 | Ga0496124_0000034 | 3300048927 | Bacteria | 325332 |
| 163 | Ga0496124_0000314 | 3300048927 | Bacteria | 89797 |
| 164 | Ga0501047_0002609 | 3300049581 | Bacteria | 17161 |
| 165 | Ga0501068_0024631 | 3300049584 | Bacteria | 3535 |
| 166 | Ga0501073_0000867 | 3300049589 | Bacteria | 21612 |
| 167 | Ga0501080_0059828 | 3300049742 | Bacteria | 3545 |
| 168 | Ga0501083_0003864 | 3300049744 | Bacteria | 10522 |
| 169 | Ga0501035_0009752 | 3300049822 | Bacteria | 8926 |
| 170 | Ga0501044_0074900 | 3300049823 | Bacteria | 3438 |
| 171 | nmdc:mga03n38_411_c1 | 3300050490 | Bacteria | 10650 |
| 172 | nmdc:mga00v17_2144_c1 | 3300050491 | Bacteria | 10146 |
| 173 | nmdc:mga00v17_388_c1 | 3300050491 | Bacteria | 24773 |
| 174 | nmdc:mga0yw44_28_c1 | 3300050492 | Bacteria | 35472 |
| 175 | nmdc:mga06z11_3593_c1 | 3300050494 | Bacteria | 6010 |
| 176 | nmdc:mga06z11_7348_c1 | 3300050494 | Bacteria | 4527 |
| 177 | nmdc:mga07m45_1662_c1 | 3300050496 | Bacteria | 10240 |
| 178 | nmdc:mga05p37_359776_c1 | 3300050507 | Bacteria | 1711 |
| 179 | nmdc:mga09592_2660_c1 | 3300050508 | Bacteria | 14459 |
| 180 | nmdc:mga06r32_21240_c1 | 3300050510 | Bacteria | 5991 |
| 181 | nmdc:mga0n895_301432_c1 | 3300050512 | Bacteria | 1624 |
| 182 | nmdc:mga0rr50_8146_c1 | 3300050513 | Bacteria | 6505 |
| 183 | nmdc:mga0rr50_938_c1 | 3300050513 | Bacteria | 15770 |
| 184 | nmdc:mga08x19_4512_c1 | 3300050514 | Bacteria | 8250 |
| 185 | nmdc:mga0sz30_51_c1 | 3300050516 | Bacteria | 43295 |
| 186 | Ga0495655_0000031 | 3300053083 | Bacteria | 30487 |
| 187 | Ga0500562_001080 | 3300053108 | Bacteria | 6697 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300035725 | Ga0373947_0105904 | Ga0373947_0105904_51_962 | 277 |
| 2 | 3300025920 | Ga0207649_10168411 | Ga0207649_101684112 | 333 |
| 3 | 3300037068 | Ga0373925_0269194 | Ga0373925_0269194_20_1099 | 333 |
| 4 | 3300037853 | Ga0436364_0714588 | Ga0436364_0714588_41_1120 | 333 |
| 5 | 3300048926 | Ga0496123_0044382 | Ga0496123_0044382_67_1146 | 333 |
| 6 | 3300025906 | Ga0207699_10159229 | Ga0207699_101592291 | 336 |
| 7 | 3300005445 | Ga0070708_100001348 | Ga0070708_1000013483 | 341 |
| 8 | 3300005467 | Ga0070706_100037057 | Ga0070706_1000370572 | 341 |
| 9 | 3300005471 | Ga0070698_100346498 | Ga0070698_1003464982 | 341 |
| 10 | 3300005518 | Ga0070699_100070547 | Ga0070699_1000705472 | 341 |
| 11 | 3300009147 | Ga0114129_10177328 | Ga0114129_101773282 | 341 |
| 12 | 3300025910 | Ga0207684_10111363 | Ga0207684_101113633 | 341 |
| 13 | 3300044673 | Ga0453683_0085928 | Ga0453683_0085928_547_1653 | 341 |
| 14 | 3300005468 | Ga0070707_100159322 | Ga0070707_1001593221 | 342 |
| 15 | 3300006028 | Ga0070717_10177689 | Ga0070717_101776892 | 342 |
| 16 | 3300005329 | Ga0070683_100000068 | Ga0070683_10000006849 | 344 |
| 17 | 3300005331 | Ga0070670_100000307 | Ga0070670_1000003072 | 344 |
| 18 | 3300005338 | Ga0068868_100000457 | Ga0068868_1000004575 | 344 |
| 19 | 3300005535 | Ga0070684_100000096 | Ga0070684_10000009632 | 344 |
| 20 | 3300005578 | Ga0068854_100329295 | Ga0068854_1003292952 | 344 |
| 21 | 3300009098 | Ga0105245_10000226 | Ga0105245_1000022638 | 344 |
| 22 | 3300009551 | Ga0105238_10000001 | Ga0105238_10000001596 | 344 |
| 23 | 3300013105 | Ga0157369_10000539 | Ga0157369_1000053919 | 344 |
| 24 | 3300013296 | Ga0157374_10000012 | Ga0157374_10000012164 | 344 |
| 25 | 3300013297 | Ga0157378_10057053 | Ga0157378_100570532 | 344 |
| 26 | 3300013297 | Ga0157378_10058374 | Ga0157378_100583742 | 344 |
| 27 | 3300013308 | Ga0157375_10000008 | Ga0157375_10000008250 | 344 |
| 28 | 3300013308 | Ga0157375_10000381 | Ga0157375_1000038126 | 344 |
| 29 | 3300014745 | Ga0157377_10000002 | Ga0157377_10000002276 | 344 |
| 30 | 3300014969 | Ga0157376_10000025 | Ga0157376_1000002568 | 344 |
| 31 | 3300021384 | Ga0213876_10000080 | Ga0213876_1000008061 | 344 |
| 32 | 3300025924 | Ga0207694_10000001 | Ga0207694_100000011637 | 344 |
| 33 | 3300025925 | Ga0207650_10000262 | Ga0207650_1000026251 | 344 |
| 34 | 3300025925 | Ga0207650_10313491 | Ga0207650_103134911 | 344 |
| 35 | 3300025927 | Ga0207687_10000003 | Ga0207687_10000003204 | 344 |
| 36 | 3300025944 | Ga0207661_10000001 | Ga0207661_10000001192 | 344 |
| 37 | 3300025981 | Ga0207640_10069414 | Ga0207640_100694142 | 344 |
| 38 | 3300026023 | Ga0207677_10000633 | Ga0207677_100006335 | 344 |
| 39 | 3300039437 | Ga0436365_1645708 | Ga0436365_1645708_26150_27274 | 344 |
| 40 | 3300047446 | Ga0495679_017789 | Ga0495679_017789_1256_2383 | 344 |
| 41 | 3300005438 | Ga0070701_10032283 | Ga0070701_100322831 | 345 |
| 42 | 3300014745 | Ga0157377_10000024 | Ga0157377_1000002495 | 345 |
| 43 | 3300049744 | Ga0501083_0003864 | Ga0501083_0003864_8544_9665 | 345 |
| 44 | 3300049584 | Ga0501068_0024631 | Ga0501068_0024631_841_1959 | 346 |
| 45 | 3300005331 | Ga0070670_100132903 | Ga0070670_1001329032 | 350 |
| 46 | 3300033180 | Ga0307510_10058595 | Ga0307510_100585952 | 350 |
| 47 | 3300046691 | Ga0495670_0005707 | Ga0495670_0005707_4842_5984 | 352 |
| 48 | 3300005436 | Ga0070713_100029590 | Ga0070713_1000295902 | 353 |
| 49 | 3300005471 | Ga0070698_100120772 | Ga0070698_1001207721 | 353 |
| 50 | 3300006028 | Ga0070717_10000082 | Ga0070717_1000008253 | 353 |
| 51 | 3300006914 | Ga0075436_100012336 | Ga0075436_1000123363 | 353 |
| 52 | 3300007076 | Ga0075435_100001359 | Ga0075435_1000013596 | 353 |
| 53 | 3300025927 | Ga0207687_10106577 | Ga0207687_101065772 | 353 |
| 54 | 3300025939 | Ga0207665_10141937 | Ga0207665_101419371 | 353 |
| 55 | 3300045051 | Ga0451576_0334265 | Ga0451576_0334265_353_1498 | 353 |
| 56 | 3300050513 | nmdc:mga0rr50_938_c1 | nmdc:mga0rr50_938_c1_5887_7032 | 353 |
| 57 | 3300050514 | nmdc:mga08x19_4512_c1 | nmdc:mga08x19_4512_c1_3852_4997 | 353 |
| 58 | 3300053083 | Ga0495655_0000031 | Ga0495655_0000031_29117_30313 | 353 |
| 59 | 3300005441 | Ga0070700_100000025 | Ga0070700_10000002577 | 354 |
| 60 | 3300006844 | Ga0075428_100321363 | Ga0075428_1003213632 | 354 |
| 61 | 3300026075 | Ga0207708_10000052 | Ga0207708_1000005255 | 354 |
| 62 | 3300005336 | Ga0070680_100034243 | Ga0070680_1000342432 | 355 |
| 63 | 3300005337 | Ga0070682_100000001 | Ga0070682_100000001485 | 355 |
| 64 | 3300005338 | Ga0068868_100000947 | Ga0068868_10000094723 | 355 |
| 65 | 3300005340 | Ga0070689_100009202 | Ga0070689_1000092022 | 355 |
| 66 | 3300005354 | Ga0070675_100000048 | Ga0070675_10000004847 | 355 |
| 67 | 3300005468 | Ga0070707_100029747 | Ga0070707_1000297476 | 355 |
| 68 | 3300005543 | Ga0070672_100000911 | Ga0070672_10000091113 | 355 |
| 69 | 3300005618 | Ga0068864_100000091 | Ga0068864_1000000918 | 355 |
| 70 | 3300005842 | Ga0068858_100002023 | Ga0068858_10000202322 | 355 |
| 71 | 3300006844 | Ga0075428_100014612 | Ga0075428_1000146125 | 355 |
| 72 | 3300006847 | Ga0075431_100017421 | Ga0075431_1000174215 | 355 |
| 73 | 3300006880 | Ga0075429_100302999 | Ga0075429_1003029991 | 355 |
| 74 | 3300007076 | Ga0075435_100024790 | Ga0075435_1000247901 | 355 |
| 75 | 3300009036 | Ga0105244_10009694 | Ga0105244_100096943 | 355 |
| 76 | 3300009093 | Ga0105240_10035645 | Ga0105240_100356453 | 355 |
| 77 | 3300009098 | Ga0105245_10000463 | Ga0105245_1000046310 | 355 |
| 78 | 3300009176 | Ga0105242_10002139 | Ga0105242_1000213912 | 355 |
| 79 | 3300010375 | Ga0105239_10016894 | Ga0105239_100168942 | 355 |
| 80 | 3300013297 | Ga0157378_10027218 | Ga0157378_100272182 | 355 |
| 81 | 3300013306 | Ga0163162_10035945 | Ga0163162_100359452 | 355 |
| 82 | 3300013306 | Ga0163162_10292271 | Ga0163162_102922711 | 355 |
| 83 | 3300013308 | Ga0157375_10000146 | Ga0157375_1000014641 | 355 |
| 84 | 3300014326 | Ga0157380_10020244 | Ga0157380_100202443 | 355 |
| 85 | 3300014745 | Ga0157377_10060491 | Ga0157377_100604911 | 355 |
| 86 | 3300021358 | Ga0213873_10000002 | Ga0213873_10000002879 | 355 |
| 87 | 3300021384 | Ga0213876_10000001 | Ga0213876_10000001962 | 355 |
| 88 | 3300021384 | Ga0213876_10003017 | Ga0213876_100030179 | 355 |
| 89 | 3300025913 | Ga0207695_10056364 | Ga0207695_100563643 | 355 |
| 90 | 3300025917 | Ga0207660_10011112 | Ga0207660_100111122 | 355 |
| 91 | 3300025922 | Ga0207646_10331089 | Ga0207646_103310892 | 355 |
| 92 | 3300025926 | Ga0207659_10000007 | Ga0207659_10000007276 | 355 |
| 93 | 3300025927 | Ga0207687_10000773 | Ga0207687_1000077316 | 355 |
| 94 | 3300025927 | Ga0207687_10001038 | Ga0207687_1000103812 | 355 |
| 95 | 3300025934 | Ga0207686_10004299 | Ga0207686_100042994 | 355 |
| 96 | 3300025936 | Ga0207670_10001162 | Ga0207670_100011624 | 355 |
| 97 | 3300025940 | Ga0207691_10000269 | Ga0207691_100002699 | 355 |
| 98 | 3300025960 | Ga0207651_10032994 | Ga0207651_100329943 | 355 |
| 99 | 3300026023 | Ga0207677_10000045 | Ga0207677_1000004577 | 355 |
| 100 | 3300026035 | Ga0207703_10000104 | Ga0207703_1000010422 | 355 |
| 101 | 3300026041 | Ga0207639_10000051 | Ga0207639_1000005199 | 355 |
| 102 | 3300026095 | Ga0207676_10000013 | Ga0207676_10000013193 | 355 |
| 103 | 3300026118 | Ga0207675_100107666 | Ga0207675_1001076662 | 355 |
| 104 | 3300039437 | Ga0436365_0404975 | Ga0436365_0404975_130911_132098 | 355 |
| 105 | 3300039437 | Ga0436365_1042710 | Ga0436365_1042710_1526_2701 | 355 |
| 106 | 3300039453 | Ga0436362_0660519 | Ga0436362_0660519_44248_45435 | 355 |
| 107 | 3300042876 | Ga0451577_0000971 | Ga0451577_0000971_30531_31715 | 355 |
| 108 | 3300044712 | Ga0453684_0002850 | Ga0453684_0002850_23998_25182 | 355 |
| 109 | 3300046515 | Ga0495620_0000908 | Ga0495620_0000908_15912_17099 | 355 |
| 110 | 3300049589 | Ga0501073_0000867 | Ga0501073_0000867_10111_11292 | 355 |
| 111 | 3300050510 | nmdc:mga06r32_21240_c1 | nmdc:mga06r32_21240_c1_1929_3119 | 355 |
| 112 | 3300050512 | nmdc:mga0n895_301432_c1 | nmdc:mga0n895_301432_c1_50_1222 | 355 |
| 113 | 3300050513 | nmdc:mga0rr50_8146_c1 | nmdc:mga0rr50_8146_c1_3435_4607 | 355 |
| 114 | 3300021358 | Ga0213873_10027136 | Ga0213873_100271361 | 356 |
| 115 | 3300021361 | Ga0213872_10000378 | Ga0213872_1000037812 | 356 |
| 116 | 3300021384 | Ga0213876_10032932 | Ga0213876_100329323 | 356 |
| 117 | 3300021388 | Ga0213875_10000002 | Ga0213875_1000000226 | 356 |
| 118 | 3300021388 | Ga0213875_10000076 | Ga0213875_1000007638 | 356 |
| 119 | 3300021388 | Ga0213875_10016778 | Ga0213875_100167782 | 356 |
| 120 | 3300031241 | Ga0265325_10071746 | Ga0265325_100717462 | 356 |
| 121 | 3300037853 | Ga0436364_0612043 | Ga0436364_0612043_25069_26217 | 356 |
| 122 | 3300037853 | Ga0436364_0871624 | Ga0436364_0871624_40652_41800 | 356 |
| 123 | 3300037853 | Ga0436364_1158872 | Ga0436364_1158872_1335_2483 | 356 |
| 124 | 3300037853 | Ga0436364_1355754 | Ga0436364_1355754_17_1165 | 356 |
| 125 | 3300039437 | Ga0436365_0978685 | Ga0436365_0978685_3990_5138 | 356 |
| 126 | 3300039447 | Ga0436361_0786779 | Ga0436361_0786779_113887_115035 | 356 |
| 127 | 3300039450 | Ga0436363_1064427 | Ga0436363_1064427_103_1251 | 356 |
| 128 | 3300039453 | Ga0436362_0459924 | Ga0436362_0459924_681_1829 | 356 |
| 129 | 3300028573 | Ga0265334_10000060 | Ga0265334_1000006028 | 357 |
| 130 | 3300037471 | Ga0395905_0116867 | Ga0395905_0116867_440_1591 | 357 |
| 131 | 3300035692 | Ga0373935_0078237 | Ga0373935_0078237_173_1327 | 358 |
| 132 | 3300005617 | Ga0068859_100083862 | Ga0068859_1000838623 | 360 |
| 133 | 3300006931 | Ga0097620_100083859 | Ga0097620_1000838593 | 360 |
| 134 | 3300013308 | Ga0157375_10237361 | Ga0157375_102373612 | 360 |
| 135 | 3300049581 | Ga0501047_0002609 | Ga0501047_0002609_4728_5906 | 360 |
| 136 | 3300049742 | Ga0501080_0059828 | Ga0501080_0059828_1851_3029 | 360 |
| 137 | 3300005344 | Ga0070661_100081099 | Ga0070661_1000810992 | 361 |
| 138 | 3300005434 | Ga0070709_10060369 | Ga0070709_100603691 | 361 |
| 139 | 3300005444 | Ga0070694_100009242 | Ga0070694_1000092422 | 361 |
| 140 | 3300005545 | Ga0070695_100016982 | Ga0070695_1000169822 | 361 |
| 141 | 3300015265 | Ga0182005_1000545 | Ga0182005_100054515 | 361 |
| 142 | 3300031241 | Ga0265325_10091973 | Ga0265325_100919731 | 361 |
| 143 | 3300031911 | Ga0307412_10000422 | Ga0307412_1000042218 | 361 |
| 144 | 3300037418 | Ga0395900_0123724 | Ga0395900_0123724_1204_2373 | 361 |
| 145 | 3300046648 | Ga0495611_0000023 | Ga0495611_0000023_73165_74334 | 361 |
| 146 | 3300048925 | Ga0496122_0033714 | Ga0496122_0033714_903_2066 | 361 |
| 147 | 3300048927 | Ga0496124_0000314 | Ga0496124_0000314_69243_70406 | 361 |
| 148 | 3300049822 | Ga0501035_0009752 | Ga0501035_0009752_706_2031 | 361 |
| 149 | 3300005327 | Ga0070658_10277702 | Ga0070658_102777021 | 362 |
| 150 | 3300005339 | Ga0070660_100133188 | Ga0070660_1001331882 | 362 |
| 151 | 3300005458 | Ga0070681_10071579 | Ga0070681_100715794 | 362 |
| 152 | 3300005564 | Ga0070664_100057879 | Ga0070664_1000578794 | 362 |
| 153 | 3300006028 | Ga0070717_10044078 | Ga0070717_100440782 | 362 |
| 154 | 3300006038 | Ga0075365_10001426 | Ga0075365_1000142610 | 362 |
| 155 | 3300006048 | Ga0075363_100017829 | Ga0075363_1000178293 | 362 |
| 156 | 3300006051 | Ga0075364_10000841 | Ga0075364_1000084114 | 362 |
| 157 | 3300006178 | Ga0075367_10005521 | Ga0075367_100055216 | 362 |
| 158 | 3300006186 | Ga0075369_10000562 | Ga0075369_1000056211 | 362 |
| 159 | 3300006353 | Ga0075370_10001310 | Ga0075370_100013105 | 362 |
| 160 | 3300006880 | Ga0075429_100002963 | Ga0075429_1000029635 | 362 |
| 161 | 3300009147 | Ga0114129_10428875 | Ga0114129_104288751 | 362 |
| 162 | 3300013100 | Ga0157373_10000162 | Ga0157373_1000016241 | 362 |
| 163 | 3300013100 | Ga0157373_10003016 | Ga0157373_100030166 | 362 |
| 164 | 3300025909 | Ga0207705_10186924 | Ga0207705_101869242 | 362 |
| 165 | 3300025912 | Ga0207707_10091954 | Ga0207707_100919542 | 362 |
| 166 | 3300025920 | Ga0207649_10108282 | Ga0207649_101082822 | 362 |
| 167 | 3300025945 | Ga0207679_10043481 | Ga0207679_100434814 | 362 |
| 168 | 3300026041 | Ga0207639_10114341 | Ga0207639_101143412 | 362 |
| 169 | 3300028786 | Ga0307517_10009198 | Ga0307517_1000919811 | 362 |
| 170 | 3300028800 | Ga0265338_10020049 | Ga0265338_100200498 | 362 |
| 171 | 3300028800 | Ga0265338_10051460 | Ga0265338_100514602 | 362 |
| 172 | 3300031251 | Ga0265327_10000240 | Ga0265327_1000024094 | 362 |
| 173 | 3300031456 | Ga0307513_10041662 | Ga0307513_100416624 | 362 |
| 174 | 3300046507 | Ga0495606_0014455 | Ga0495606_0014455_4615_5808 | 362 |
| 175 | 3300048927 | Ga0496124_0000034 | Ga0496124_0000034_202442_203641 | 362 |
| 176 | 3300049823 | Ga0501044_0074900 | Ga0501044_0074900_511_1680 | 362 |
| 177 | 3300050490 | nmdc:mga03n38_411_c1 | nmdc:mga03n38_411_c1_1972_3192 | 362 |
| 178 | 3300050491 | nmdc:mga00v17_2144_c1 | nmdc:mga00v17_2144_c1_4005_5225 | 362 |
| 179 | 3300050491 | nmdc:mga00v17_388_c1 | nmdc:mga00v17_388_c1_12327_13496 | 362 |
| 180 | 3300050492 | nmdc:mga0yw44_28_c1 | nmdc:mga0yw44_28_c1_27593_28762 | 362 |
| 181 | 3300050494 | nmdc:mga06z11_3593_c1 | nmdc:mga06z11_3593_c1_2387_3556 | 362 |
| 182 | 3300050494 | nmdc:mga06z11_7348_c1 | nmdc:mga06z11_7348_c1_107_1327 | 362 |
| 183 | 3300050496 | nmdc:mga07m45_1662_c1 | nmdc:mga07m45_1662_c1_2783_4003 | 362 |
| 184 | 3300050507 | nmdc:mga05p37_359776_c1 | nmdc:mga05p37_359776_c1_492_1661 | 362 |
| 185 | 3300050508 | nmdc:mga09592_2660_c1 | nmdc:mga09592_2660_c1_10039_11259 | 362 |
| 186 | 3300050516 | nmdc:mga0sz30_51_c1 | nmdc:mga0sz30_51_c1_38875_40095 | 362 |
| 187 | 3300053108 | Ga0500562_001080 | Ga0500562_001080_755_1918 | 362 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4iyo-assembly1.cif.gz_D | crystal structure of cystathionine gamma lyase from xanthomonas oryzae pv. oryzae (xometc) in complex with e-site serine, a-site serine, a-site external aldimine structure with aminoacrylate and a-site iminopropionate intermediates | 0.9698 | 7 | 362 |
| 6k1l-assembly1.cif.gz_B | e53a mutant of a putative cystathionine gamma-lyase | 0.9691 | 6 | 362 |
| 6k1m-assembly1.cif.gz_C | engineered form of a putative cystathionine gamma-lyase | 0.9662 | 6 | 362 |
| 6cja-assembly1.cif.gz_D | crystal structure of cystathionine beta-lyase from legionella pneumophila philadelphia 1 in complex with alanyl-plp and serine | 0.9658 | 7 | 362 |
| 4ixz-assembly1.cif.gz_D | native structure of cystathionine gamma lyase (xometc) from xanthomonas oryzae pv. oryzae at ph 9.0 | 0.9585 | 7 | 361 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3e6gD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9864 | 7 | 250 | 3.40.640.10 |
| 3e6gD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9771 | 7 | 250 | 3.40.640.10 |
| af_Q55DV9_2_251_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9769 | 8 | 253 | 3.40.640.10 |
| af_I1JN71_90_331_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9689 | 9 | 253 | 3.40.640.10 |
| af_P9WGB7_1_258_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9689 | 8 | 253 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W5HUF5-F1-model_v4 | deleted | 0.9847 | 281 | 362 |
|
| AF-A0A530BFD6-F1-model_v4 | Aminotransferase class V-fold PLP-dependent enzyme | 0.9833 | 1 | 210 |
GO:0003962
GO:0004123 GO:0005737 GO:0008483 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A7M3RDP6-F1-model_v4 | deleted | 0.9815 | 281 | 361 |
|
| AF-A0A2M8SB62-F1-model_v4 | Cystathionine gamma-synthase | 0.9789 | 8 | 163 |
GO:0003962
GO:0004123 GO:0005737 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A529ZDV4-F1-model_v4 | Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.9784 | 90 | 200 |
GO:0003962
GO:0004123 GO:0005737 GO:0008483 GO:0019343 GO:0019346 GO:0030170 |
Predicted Structure (AlphaFold2)
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