F286528

General Info

Members Datasets Scaffolds Average Seq Length
186 128 372 411

Family's Representative Sequence

Representative Sequence 3300046516|Ga0495628_0084808|Ga0495628_0084808_162_1484
Length 440
Sequence LKYTRRDFIQTGAGLGAGGVLTFAALRPGRAAAAERPRLETFSDWIRADRETRKRGLEQCLQRIRDLDPAIQAWVQVKPERPTADGPLSDIPFGVKDIVETKGMATEYGSPLYKGRVGTADAAIIRDIRKRGAILLGKTVTTAFAYRTPGPTRNPRNLEHTPGGRSSGSAAAVAAGMVPFTIGEQTRGSMIRPASYCGVTGFKPTFDLLPMEGVLPFAKSLDTLGLYTHTPADMIALWKTLGHSAGRAEQFVFGAPDPIPECEPEMANAFRRALSMLRDSSVRIKSIDIAETLKKLDEAQDLEMFYEGARFHEARLKEAGDRLDPALADLVREGLKIPAERYNETKRFVDDSRVRFAEIFKSTPVILTPAATGPAPLGLATTGDGRMNAPWTALGTPAVSIPMPVGGSLPLGLQLTADLGQDARVLQAALLVHNAFGAAK

Samples

Sample ID Description Type Environment
1 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
28 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
57 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
58 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
59 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
60 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
61 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
62 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
63 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
64 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
65 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
66 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
67 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
68 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
92 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
107 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
113 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
123 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 2855730933 Achromobacter sp. HZ28 Isolate Nodule
126 2855767633 Achromobacter sp. HZ34 Isolate Nodule
127 2858950400 Achromobacter sp. K91 Isolate Unclassified
128 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.31
Metatranscriptomes 0.54
Isolates 2.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.08
Rhizoplane 2.15
Rhizosphere 94.62
Stem 0
Stem Tuber 0
Unclassified 12.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495628_0084808 3300046516 Unclassified 2458
2 Ga0065707_10006560 3300005295 Bacteria 2538
3 Ga0070690_100004801 3300005330 Bacteria 7542
4 Ga0070666_10023859 3300005335 Bacteria 3982
5 Ga0070669_100006675 3300005353 Bacteria 8308
6 Ga0070669_100164440 3300005353 Bacteria 1726
7 Ga0070709_10055582 3300005434 Unclassified 2500
8 Ga0070713_100005581 3300005436 Bacteria 8621
9 Ga0070713_100020307 3300005436 Bacteria 5091
10 Ga0070706_100131712 3300005467 Unclassified 2333
11 Ga0070707_100092142 3300005468 Unclassified 2934
12 Ga0070698_100049912 3300005471 Bacteria 4269
13 Ga0070699_100051537 3300005518 Bacteria 3563
14 Ga0070699_100109622 3300005518 Bacteria 2423
15 Ga0070697_100034970 3300005536 Bacteria 4052
16 Ga0070686_100001900 3300005544 Bacteria 11623
17 Ga0070695_100016891 3300005545 Bacteria 4423
18 Ga0070696_100025208 3300005546 Bacteria 4042
19 Ga0070704_100192345 3300005549 Bacteria 1641
20 Ga0081539_10018587 3300005985 Bacteria 4814
21 Ga0070717_10032286 3300006028 Bacteria 4218
22 Ga0070717_10229310 3300006028 Bacteria 1635
23 Ga0075428_100000042 3300006844 Bacteria 102264
24 Ga0075428_100002597 3300006844 Bacteria 19636
25 Ga0075428_100002841 3300006844 Bacteria 18885
26 Ga0075428_100261611 3300006844 Bacteria 1863
27 Ga0075430_100001985 3300006846 Bacteria 16850
28 Ga0075430_100004318 3300006846 Bacteria 12007
29 Ga0075431_100003341 3300006847 Bacteria 15543
30 Ga0075431_100031819 3300006847 Bacteria 5434
31 Ga0075433_10016040 3300006852 Bacteria 6163
32 Ga0075433_10083379 3300006852 Unclassified 2821
33 Ga0075434_100000051 3300006871 Bacteria 57214
34 Ga0075429_100001053 3300006880 Bacteria 22024
35 Ga0075429_100010057 3300006880 Bacteria 8199
36 Ga0075436_100000678 3300006914 Bacteria 22461
37 Ga0075435_100000006 3300007076 Bacteria 119843
38 Ga0075435_100001793 3300007076 Bacteria 13967
39 Ga0099794_10006095 3300007265 Bacteria 4870
40 Ga0099794_10056146 3300007265 Unclassified 1904
41 Ga0099795_10004657 3300007788 Unclassified 3566
42 Ga0111539_10000002 3300009094 Bacteria 983359
43 Ga0111539_10005855 3300009094 Bacteria 15888
44 Ga0105245_10019035 3300009098 Bacteria 6008
45 Ga0105245_10023660 3300009098 Bacteria 5392
46 Ga0105245_10306382 3300009098 Bacteria 1560
47 Ga0114129_10041744 3300009147 Bacteria 6460
48 Ga0114129_10055011 3300009147 Bacteria 5578
49 Ga0105241_10043879 3300009174 Bacteria 3387
50 Ga0105241_10152467 3300009174 Bacteria 1892
51 Ga0105242_10036084 3300009176 Unclassified 3965
52 Ga0105242_10202673 3300009176 Unclassified 1763
53 Ga0105248_10018667 3300009177 Bacteria 7667
54 Ga0099796_10004678 3300010159 Bacteria 3339
55 Ga0157374_10013412 3300013296 Bacteria 7153
56 Ga0157378_10001146 3300013297 Bacteria 24057
57 Ga0157378_10092478 3300013297 Unclassified 2752
58 Ga0157380_10153200 3300014326 Bacteria 1995
59 Ga0157379_10337950 3300014968 Bacteria 1377
60 Ga0207680_10025918 3300025903 Bacteria 3241
61 Ga0207705_10162448 3300025909 Bacteria 1679
62 Ga0207654_10015638 3300025911 Bacteria 3942
63 Ga0207695_10198513 3300025913 Bacteria 1921
64 Ga0207662_10001320 3300025918 Bacteria 11950
65 Ga0207646_10078332 3300025922 Unclassified 2954
66 Ga0207681_10003986 3300025923 Bacteria 9159
67 Ga0207687_10246628 3300025927 Unclassified 1418
68 Ga0207700_10006091 3300025928 Bacteria 7267
69 Ga0207691_10073211 3300025940 Bacteria 3090
70 Ga0207711_10119015 3300025941 Bacteria 2356
71 Ga0207711_10194274 3300025941 Unclassified 1850
72 Ga0207640_10003693 3300025981 Bacteria 8253
73 Ga0207428_10000004 3300027907 Bacteria 727800
74 Ga0268265_10140013 3300028380 Bacteria 2024
75 Ga0265760_10002863 3300031090 Bacteria 5038
76 Ga0265325_10032865 3300031241 Unclassified 2768
77 Ga0373958_0005859 3300034819 Bacteria 1889
78 Ga0373926_0026323 3300035083 Bacteria 2034
79 Ga0373929_0000341 3300035085 Bacteria 8689
80 Ga0373940_0002840 3300035088 Bacteria 3444
81 Ga0373949_0003548 3300035090 Bacteria 3689
82 Ga0373951_0003862 3300035091 Bacteria 3600
83 Ga0373952_0001066 3300035092 Bacteria 5011
84 Ga0373932_0003519 3300035112 Bacteria 3757
85 Ga0373941_0000170 3300035115 Bacteria 12054
86 Ga0373960_0002083 3300035121 Bacteria 4501
87 Ga0373942_0001004 3300035207 Bacteria 7676
88 Ga0373961_0001836 3300035241 Bacteria 5802
89 Ga0373924_0031431 3300035410 Bacteria 2135
90 Ga0373931_0013573 3300035691 Bacteria 3969
91 Ga0373935_0106029 3300035692 Bacteria 1859
92 Ga0373927_0018259 3300035695 Bacteria 4610
93 Ga0373933_0110558 3300035724 Bacteria 1714
94 Ga0373947_0098249 3300035725 Bacteria 1836
95 Ga0373937_0061016 3300036401 Bacteria 3466
96 Ga0373937_0280687 3300036401 Bacteria 1573
97 Ga0451576_0233505 3300045051 Unclassified 1921
98 Ga0451576_0404866 3300045051 Bacteria 1431
99 Ga0495592_0036349 3300046454 Unclassified 3710
100 Ga0495651_0000112 3300046462 Bacteria 59789
101 Ga0495651_0016842 3300046462 Bacteria 5660
102 Ga0495653_0048757 3300046463 Unclassified 3268
103 Ga0495580_0007950 3300046472 Bacteria 8478
104 Ga0495582_0005862 3300046473 Bacteria 6848
105 Ga0495664_0054323 3300046477 Bacteria 2382
106 Ga0495608_0014016 3300046511 Bacteria 5562
107 Ga0495628_0006961 3300046516 Bacteria 9815
108 Ga0495628_0037758 3300046516 Unclassified 3871
109 Ga0495628_0162916 3300046516 Bacteria 1694
110 Ga0495630_0026372 3300046517 Bacteria 4302
111 Ga0495630_0236270 3300046517 Bacteria 1397
112 Ga0495652_0011263 3300046529 Bacteria 8093
113 Ga0495586_0000788 3300046535 Bacteria 18231
114 Ga0495586_0038802 3300046535 Bacteria 2560
115 Ga0495587_0005909 3300046536 Bacteria 7979
116 Ga0495587_0101702 3300046536 Unclassified 1655
117 Ga0495645_0064897 3300046543 Bacteria 2641
118 Ga0495645_0119311 3300046543 Bacteria 1859
119 Ga0495645_0144539 3300046543 Bacteria 1657
120 Ga0495667_0006370 3300046559 Bacteria 8003
121 Ga0495667_0007228 3300046559 Bacteria 7535
122 Ga0495667_0039633 3300046559 Bacteria 3132
123 Ga0495635_0017339 3300046663 Bacteria 5031
124 Ga0495635_0228446 3300046663 Bacteria 1257
125 Ga0495657_0067762 3300046675 Unclassified 2341
126 Ga0495599_0087335 3300046678 Bacteria 1947
127 Ga0495623_0001872 3300046679 Bacteria 14114
128 Ga0495658_0086880 3300046683 Bacteria 1846
129 Ga0495613_0009582 3300046689 Bacteria 7196
130 Ga0495613_0063181 3300046689 Bacteria 2709
131 Ga0495613_0165132 3300046689 Bacteria 1573
132 Ga0495600_0001890 3300046809 Bacteria 11763
133 Ga0495600_0042711 3300046809 Bacteria 2956
134 Ga0495604_0004361 3300047317 Bacteria 11205
135 Ga0495674_0006621 3300047319 Bacteria 11101
136 Ga0495674_0044081 3300047319 Bacteria 3967
137 Ga0495674_0221038 3300047319 Bacteria 1566
138 Ga0495680_0003272 3300047322 Bacteria 16066
139 Ga0495680_0009155 3300047322 Bacteria 8934
140 Ga0495680_0028092 3300047322 Bacteria 4615
141 Ga0495675_0001722 3300047444 Bacteria 13090
142 Ga0495675_0012289 3300047444 Bacteria 5389
143 Ga0495684_0001456 3300047471 Bacteria 18942
144 Ga0495684_0009087 3300047471 Bacteria 7676
145 Ga0495684_0021452 3300047471 Bacteria 4974
146 Ga0495593_0034557 3300047673 Bacteria 2749
147 Ga0495602_0022369 3300048088 Bacteria 6190
148 Ga0495602_0114039 3300048088 Bacteria 2189
149 Ga0496102_0346273 3300048905 Bacteria 1399
150 Ga0496106_0190166 3300048909 Unclassified 1632
151 Ga0496112_0154855 3300048915 Bacteria 2259
152 Ga0496112_0195018 3300048915 Unclassified 1986
153 Ga0496119_0000547 3300048922 Bacteria 51236
154 Ga0496120_0000086 3300048923 Bacteria 154099
155 Ga0501036_0020488 3300049572 Bacteria 5554
156 Ga0501039_0011606 3300049575 Bacteria 6709
157 Ga0501040_0023952 3300049576 Bacteria 4095
158 Ga0501072_0030458 3300049588 Bacteria 4220
159 Ga0501076_0059586 3300049592 Bacteria 3037
160 Ga0501045_0198927 3300049824 Bacteria 1493
161 nmdc:mga05p37_309430_c1 3300050507 Bacteria 1873
162 nmdc:mga05p37_342555_c1 3300050507 Bacteria 1762
163 nmdc:mga05p37_37041_c1 3300050507 Bacteria 5983
164 nmdc:mga05p37_45926_c1 3300050507 Bacteria 3635
165 nmdc:mga05p37_51433_c1 3300050507 Bacteria 5067
166 nmdc:mga09592_10347_c2 3300050508 Bacteria 3705
167 nmdc:mga09592_846_c1 3300050508 Bacteria 23790
168 nmdc:mga06r32_13577_c1 3300050510 Bacteria 7384
169 nmdc:mga06r32_405835_c1 3300050510 Bacteria 1345
170 nmdc:mga06r32_9982_c1 3300050510 Bacteria 8566
171 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
172 nmdc:mga0n895_18165_c1 3300050512 Bacteria 6502
173 nmdc:mga0n895_52_c1 3300050512 Bacteria 69311
174 nmdc:mga0rr50_15_c1 3300050513 Bacteria 189079
175 nmdc:mga0rr50_54911_c1 3300050513 Bacteria 2970
176 nmdc:mga0rr50_60775_c1 3300050513 Unclassified 2844
177 nmdc:mga08x19_466_c1 3300050514 Bacteria 27299
178 nmdc:mga0a205_61164_c1 3300050515 Bacteria 3637
179 Ga0495612_0002679 3300053078 Bacteria 7354
180 Ga0495619_0176660 3300053085 Bacteria 1477
181 Ga0530510_0010199 3300061734 Bacteria 6583
182 Ga0530510_0016079 3300061734 Bacteria 5290
183 2855734193 2855730933 Bacteria 7047938
184 2855769783 2855767633 Bacteria 7049357
185 2858954060 2858950400 Bacteria 6783797
186 8048748676 8048746797 Bacteria 3557226
187 Ga0495628_0084808
188 Ga0065707_10006560
189 Ga0070690_100004801
190 Ga0070666_10023859
191 Ga0070669_100006675
192 Ga0070669_100164440
193 Ga0070709_10055582
194 Ga0070713_100005581
195 Ga0070713_100020307
196 Ga0070706_100131712
197 Ga0070707_100092142
198 Ga0070698_100049912
199 Ga0070699_100051537
200 Ga0070699_100109622
201 Ga0070697_100034970
202 Ga0070686_100001900
203 Ga0070695_100016891
204 Ga0070696_100025208
205 Ga0070704_100192345
206 Ga0081539_10018587
207 Ga0070717_10032286
208 Ga0070717_10229310
209 Ga0075428_100000042
210 Ga0075428_100002597
211 Ga0075428_100002841
212 Ga0075428_100261611
213 Ga0075430_100001985
214 Ga0075430_100004318
215 Ga0075431_100003341
216 Ga0075431_100031819
217 Ga0075433_10016040
218 Ga0075433_10083379
219 Ga0075434_100000051
220 Ga0075429_100001053
221 Ga0075429_100010057
222 Ga0075436_100000678
223 Ga0075435_100000006
224 Ga0075435_100001793
225 Ga0099794_10006095
226 Ga0099794_10056146
227 Ga0099795_10004657
228 Ga0111539_10000002
229 Ga0111539_10005855
230 Ga0105245_10019035
231 Ga0105245_10023660
232 Ga0105245_10306382
233 Ga0114129_10041744
234 Ga0114129_10055011
235 Ga0105241_10043879
236 Ga0105241_10152467
237 Ga0105242_10036084
238 Ga0105242_10202673
239 Ga0105248_10018667
240 Ga0099796_10004678
241 Ga0157374_10013412
242 Ga0157378_10001146
243 Ga0157378_10092478
244 Ga0157380_10153200
245 Ga0157379_10337950
246 Ga0207680_10025918
247 Ga0207705_10162448
248 Ga0207654_10015638
249 Ga0207695_10198513
250 Ga0207662_10001320
251 Ga0207646_10078332
252 Ga0207681_10003986
253 Ga0207687_10246628
254 Ga0207700_10006091
255 Ga0207691_10073211
256 Ga0207711_10119015
257 Ga0207711_10194274
258 Ga0207640_10003693
259 Ga0207428_10000004
260 Ga0268265_10140013
261 Ga0265760_10002863
262 Ga0265325_10032865
263 Ga0373958_0005859
264 Ga0373926_0026323
265 Ga0373929_0000341
266 Ga0373940_0002840
267 Ga0373949_0003548
268 Ga0373951_0003862
269 Ga0373952_0001066
270 Ga0373932_0003519
271 Ga0373941_0000170
272 Ga0373960_0002083
273 Ga0373942_0001004
274 Ga0373961_0001836
275 Ga0373924_0031431
276 Ga0373931_0013573
277 Ga0373935_0106029
278 Ga0373927_0018259
279 Ga0373933_0110558
280 Ga0373947_0098249
281 Ga0373937_0061016
282 Ga0373937_0280687
283 Ga0451576_0233505
284 Ga0451576_0404866
285 Ga0495592_0036349
286 Ga0495651_0000112
287 Ga0495651_0016842
288 Ga0495653_0048757
289 Ga0495580_0007950
290 Ga0495582_0005862
291 Ga0495664_0054323
292 Ga0495608_0014016
293 Ga0495628_0006961
294 Ga0495628_0037758
295 Ga0495628_0162916
296 Ga0495630_0026372
297 Ga0495630_0236270
298 Ga0495652_0011263
299 Ga0495586_0000788
300 Ga0495586_0038802
301 Ga0495587_0005909
302 Ga0495587_0101702
303 Ga0495645_0064897
304 Ga0495645_0119311
305 Ga0495645_0144539
306 Ga0495667_0006370
307 Ga0495667_0007228
308 Ga0495667_0039633
309 Ga0495635_0017339
310 Ga0495635_0228446
311 Ga0495657_0067762
312 Ga0495599_0087335
313 Ga0495623_0001872
314 Ga0495658_0086880
315 Ga0495613_0009582
316 Ga0495613_0063181
317 Ga0495613_0165132
318 Ga0495600_0001890
319 Ga0495600_0042711
320 Ga0495604_0004361
321 Ga0495674_0006621
322 Ga0495674_0044081
323 Ga0495674_0221038
324 Ga0495680_0003272
325 Ga0495680_0009155
326 Ga0495680_0028092
327 Ga0495675_0001722
328 Ga0495675_0012289
329 Ga0495684_0001456
330 Ga0495684_0009087
331 Ga0495684_0021452
332 Ga0495593_0034557
333 Ga0495602_0022369
334 Ga0495602_0114039
335 Ga0496102_0346273
336 Ga0496106_0190166
337 Ga0496112_0154855
338 Ga0496112_0195018
339 Ga0496119_0000547
340 Ga0496120_0000086
341 Ga0501036_0020488
342 Ga0501039_0011606
343 Ga0501040_0023952
344 Ga0501072_0030458
345 Ga0501076_0059586
346 Ga0501045_0198927
347 nmdc:mga05p37_309430_c1
348 nmdc:mga05p37_342555_c1
349 nmdc:mga05p37_37041_c1
350 nmdc:mga05p37_45926_c1
351 nmdc:mga05p37_51433_c1
352 nmdc:mga09592_10347_c2
353 nmdc:mga09592_846_c1
354 nmdc:mga06r32_13577_c1
355 nmdc:mga06r32_405835_c1
356 nmdc:mga06r32_9982_c1
357 nmdc:mga08y16_2_c1
358 nmdc:mga0n895_18165_c1
359 nmdc:mga0n895_52_c1
360 nmdc:mga0rr50_15_c1
361 nmdc:mga0rr50_54911_c1
362 nmdc:mga0rr50_60775_c1
363 nmdc:mga08x19_466_c1
364 nmdc:mga0a205_61164_c1
365 Ga0495612_0002679
366 Ga0495619_0176660
367 Ga0530510_0010199
368 Ga0530510_0016079
369 2855734193
370 2855769783
371 2858954060
372 8048748676

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

56

426

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o9q-assembly1.cif.gz_A crystal structure of the s155c mutant of malonamidase e2 from bradyrhizobium japonicum 0.9323 36 421
1obk-assembly1.cif.gz_B crystal structure of the r158q mutant of malonamidase e2 from bradyrhizobium japonicum 0.9295 36 421
1obj-assembly1.cif.gz_B crystal structure of the t150a mutant of malonamidase e2 from bradyrhizobium japonicum 0.9282 36 421
1ocl-assembly1.cif.gz_A the crystal structure of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.9281 36 421
1o9p-assembly1.cif.gz_B crystal structure of the s131a mutant of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.9247 36 421
ID Description Score Start End Superfamily
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9297 36 421 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8997 45 422 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8768 38 419 3.90.1300.10
af_Q5AK64_16_450_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.873 65 416 3.90.1300.10
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8711 36 421 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A2V8E313-F1-model_v4 Amidase domain-containing protein 0.9841 172 421 GO:0003824
AF-A0A2V8DWS1-F1-model_v4 Uncharacterized protein 0.9826 272 421
AF-A0A285EBU3-F1-model_v4 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit 0.9417 38 422 GO:0016740
AF-A0A8B5UXC2-F1-model_v4 deleted 0.9388 50 422
AF-A0A2E8EDY6-F1-model_v4 Amidase domain-containing protein 0.9376 38 421 GO:0003824

Map