F286332

General Info

Members Datasets Scaffolds Average Seq Length
186 153 182 250

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0002929|Ga0395900_0002929_9859_10713
Length 284
Sequence MIYSLLWLPAVLENAGLKVAEVDQWQTRGLGDMGPIRGVICHHTAGAANGNMPSLHTLINGREATDKSPRLNGPLAQLGLGRDGTYYVIAAGKCNHAGNGMWNQITTGNSSFIGIEAENMGLTLDWPPVQMDAYQRGVAAILRYLGLPAACCAGHKEYALPAGRKNDPTFDMATFRERVKAFIDGTAPPPTLIPKAELVGGVGGAVGRATLRRGDIGALVKELQRKLGLDNDGYFGVRTEAAVRNFQKNDTTDAAGLVPDGIVGPKTWAALDRGVGKPATIKAS

Samples

Sample ID Description Type Environment
1 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
2 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
97 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
112 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
113 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
114 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
115 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
118 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
119 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
120 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
121 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
127 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
149 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
150 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
151 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 0
Isolates 1.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.53
Nodule 1.08
Rhizoplane 1.08
Rhizosphere 85.48
Stem 0
Stem Tuber 0
Unclassified 4.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24742J22300_10017867 3300002244 Bacteria 1201
2 JGI25165J46597_1000041 3300003214 Bacteria 272566
3 rootL2_10108578 3300003322 Bacteria 2211
4 rootH1_10362831 3300003323 Bacteria 2113
5 JGI25404J52841_10002834 3300003659 Bacteria 3346
6 Ga0065714_10003273 3300005288 Bacteria 7897
7 Ga0065704_10080251 3300005289 Bacteria 3982
8 Ga0065715_10397897 3300005293 Bacteria 884
9 Ga0070683_100272941 3300005329 Bacteria 1608
10 Ga0070683_100832044 3300005329 Unclassified 885
11 Ga0070690_100129418 3300005330 Unclassified 1703
12 Ga0070670_100003240 3300005331 Archaea 13440
13 Ga0070670_100161355 3300005331 Bacteria 1943
14 Ga0070677_10006382 3300005333 Bacteria 3915
15 Ga0070668_100334383 3300005347 Unclassified 1278
16 Ga0070668_100533509 3300005347 Bacteria 1019
17 Ga0070669_100512508 3300005353 Bacteria 996
18 Ga0070675_100131749 3300005354 Bacteria 2131
19 Ga0070675_100156385 3300005354 Bacteria 1957
20 Ga0070671_100434695 3300005355 Bacteria 1125
21 Ga0070674_100011179 3300005356 Bacteria 5453
22 Ga0070674_100018040 3300005356 Bacteria 4452
23 Ga0070673_100088168 3300005364 Bacteria 2530
24 Ga0070673_100583158 3300005364 Bacteria 1018
25 Ga0070688_100053398 3300005365 Bacteria 2528
26 Ga0070708_100027993 3300005445 Bacteria 4844
27 Ga0070678_100037518 3300005456 Bacteria 3404
28 Ga0070662_100192620 3300005457 Bacteria 1613
29 Ga0070662_100260250 3300005457 Bacteria 1397
30 Ga0070681_10125897 3300005458 Bacteria 2495
31 Ga0070685_10012473 3300005466 Archaea 4466
32 Ga0070706_100000055 3300005467 Bacteria 137675
33 Ga0070707_100019726 3300005468 Bacteria 6355
34 Ga0070698_100101224 3300005471 Viruses 2853
35 Ga0070699_100395927 3300005518 Bacteria 1248
36 Ga0070684_100056593 3300005535 Bacteria 3423
37 Ga0070672_100080476 3300005543 Bacteria 2610
38 Ga0070665_100056203 3300005548 Bacteria 3947
39 Ga0070665_100241733 3300005548 Bacteria 1806
40 Ga0070665_100334004 3300005548 Bacteria 1520
41 Ga0068855_100000048 3300005563 Bacteria 145334
42 Ga0068856_100000063 3300005614 Bacteria 99730
43 Ga0068852_100007509 3300005616 Bacteria 7959
44 Ga0068859_100007719 3300005617 Bacteria 10925
45 Ga0068861_100526785 3300005719 Bacteria 1073
46 Ga0068858_100000784 3300005842 Bacteria 33220
47 Ga0068858_100327155 3300005842 Bacteria 1466
48 Ga0081540_1001166 3300005983 Bacteria 23099
49 Ga0070716_100000018 3300006173 Bacteria 84686
50 Ga0075367_10260250 3300006178 Unclassified 1089
51 Ga0075428_100295513 3300006844 Bacteria 1742
52 Ga0075431_100002663 3300006847 Bacteria 17292
53 Ga0075431_100065452 3300006847 Bacteria 3754
54 Ga0097620_100007719 3300006931 Bacteria 10925
55 Ga0079104_1001700 3300006946 Bacteria 14065
56 Ga0075435_100118077 3300007076 Bacteria 2211
57 Ga0105240_10047456 3300009093 Bacteria 5434
58 Ga0111539_10107030 3300009094 Bacteria 3281
59 Ga0111539_10791249 3300009094 Bacteria 1104
60 Ga0114129_10135464 3300009147 Bacteria 3380
61 Ga0105241_10458695 3300009174 Unclassified 1129
62 Ga0105237_10077125 3300009545 Bacteria 3323
63 Ga0105238_10003753 3300009551 Bacteria 15085
64 Ga0105238_10143716 3300009551 Bacteria 2362
65 Ga0157371_10016800 3300013102 Bacteria 5450
66 Ga0157378_10934538 3300013297 Bacteria 899
67 Ga0163162_10468541 3300013306 Bacteria 1391
68 Ga0157372_10023440 3300013307 Bacteria 6691
69 Ga0157372_10099006 3300013307 Bacteria 3326
70 Ga0157375_11188194 3300013308 Bacteria 894
71 Ga0157380_10782156 3300014326 Bacteria 969
72 Ga0157377_10242275 3300014745 Bacteria 1165
73 Ga0213872_10044853 3300021361 Bacteria 2012
74 Ga0209437_113565 3300025233 Bacteria 1161
75 Ga0209233_1000104 3300025261 Bacteria 272675
76 Ga0209051_1002741 3300025303 Bacteria 12213
77 Ga0209257_1067646 3300025304 Bacteria 952
78 Ga0207682_10000700 3300025893 Bacteria 15521
79 Ga0207684_10000171 3300025910 Bacteria 107398
80 Ga0207671_10396801 3300025914 Bacteria 1097
81 Ga0207646_10009629 3300025922 Bacteria 9532
82 Ga0207681_10054909 3300025923 Bacteria 2711
83 Ga0207681_10280792 3300025923 Bacteria 1311
84 Ga0207694_10007561 3300025924 Bacteria 8238
85 Ga0207694_10017861 3300025924 Bacteria 5362
86 Ga0207650_10020771 3300025925 Bacteria 4636
87 Ga0207659_10236388 3300025926 Bacteria 1476
88 Ga0207644_10135835 3300025931 Bacteria 1888
89 Ga0207706_10227817 3300025933 Bacteria 1631
90 Ga0207706_10380795 3300025933 Bacteria 1224
91 Ga0207669_10001104 3300025937 Bacteria 11538
92 Ga0207665_10000022 3300025939 Bacteria 109003
93 Ga0207691_10005050 3300025940 Bacteria 12733
94 Ga0207661_10296736 3300025944 Bacteria 1448
95 Ga0207667_10000023 3300025949 Bacteria 362527
96 Ga0207651_10043937 3300025960 Bacteria 2986
97 Ga0207651_10149978 3300025960 Bacteria 1813
98 Ga0207712_10063889 3300025961 Bacteria 2622
99 Ga0207712_10342609 3300025961 Bacteria 1240
100 Ga0207658_10037869 3300025986 Bacteria 3470
101 Ga0207702_10000508 3300026078 Bacteria 43847
102 Ga0207675_100091176 3300026118 Archaea 2865
103 Ga0207683_10006174 3300026121 Bacteria 10269
104 Ga0207683_10034012 3300026121 Bacteria 4429
105 Ga0207698_10005200 3300026142 Bacteria 8002
106 Ga0207698_10469776 3300026142 Bacteria 1218
107 Ga0209281_1001361 3300027111 Bacteria 15128
108 Ga0207428_10398441 3300027907 Viruses 1008
109 Ga0268266_10169543 3300028379 Bacteria 1981
110 Ga0268266_10184527 3300028379 Bacteria 1901
111 Ga0268265_10463631 3300028380 Bacteria 1186
112 Ga0265338_10327525 3300028800 Bacteria 1107
113 Ga0307508_10009940 3300031616 Bacteria 8722
114 Ga0307410_10063485 3300031852 Bacteria 2534
115 Ga0307409_100010326 3300031995 Bacteria 5798
116 Ga0307510_10055252 3300033180 Bacteria 4149
117 Ga0373939_0017998 3300035114 Unclassified 1885
118 Ga0395900_0002929 3300037418 Bacteria 18587
119 Ga0436364_0239191 3300037853 Bacteria 5735
120 Ga0395901_0032346 3300038443 Bacteria 5398
121 Ga0436365_0324197 3300039437 Bacteria 3012
122 Ga0436361_0536480 3300039447 Bacteria 12426
123 Ga0466969_0015723 3300044656 Bacteria 3965
124 Ga0453683_0004247 3300044673 Bacteria 10229
125 Ga0453683_0037223 3300044673 Unclassified 3061
126 Ga0453683_0117122 3300044673 Bacteria 1676
127 Ga0466961_0000481 3300044693 Bacteria 25354
128 Ga0453684_0000691 3300044712 Bacteria 120087
129 Ga0451576_0082144 3300045051 Unclassified 3351
130 Ga0495592_0000175 3300046454 Bacteria 56416
131 Ga0495638_0000820 3300046460 Bacteria 32778
132 Ga0495638_0080223 3300046460 Bacteria 1983
133 Ga0495585_0024945 3300046492 Bacteria 3427
134 Ga0495585_0108159 3300046492 Bacteria 1481
135 Ga0495583_0000102 3300046506 Bacteria 143105
136 Ga0495606_0027739 3300046507 Unclassified 4008
137 Ga0495620_0001649 3300046515 Bacteria 13199
138 Ga0495632_0000041 3300046519 Bacteria 145509
139 Ga0495644_0126770 3300046523 Bacteria 972
140 Ga0495648_0030040 3300046524 Bacteria 3600
141 Ga0495648_0204188 3300046524 Viruses 987
142 Ga0495663_0030592 3300046525 Bacteria 1596
143 Ga0495642_0003473 3300046528 Bacteria 6210
144 Ga0495598_0017447 3300046537 Bacteria 1850
145 Ga0495621_0007838 3300046539 Bacteria 3175
146 Ga0495656_0029732 3300046615 Bacteria 2202
147 Ga0495668_0000883 3300046616 Bacteria 33776
148 Ga0495611_0011563 3300046648 Bacteria 3744
149 Ga0495625_0234751 3300046660 Bacteria 1196
150 Ga0495661_0006336 3300046665 Bacteria 8321
151 Ga0495646_0069450 3300046680 Bacteria 2078
152 Ga0495660_0000373 3300046810 Bacteria 39287
153 Ga0495660_0105768 3300046810 Bacteria 1442
154 Ga0495683_0072609 3300047323 Bacteria 1688
155 Ga0495687_000859 3300047443 Bacteria 32277
156 Ga0495687_069199 3300047443 Bacteria 1422
157 Ga0495681_0039339 3300047470 Bacteria 2310
158 Ga0496114_0219236 3300048917 Unclassified 1670
159 Ga0496115_0620485 3300048918 Unclassified 858
160 Ga0496116_0009910 3300048919 Bacteria 8057
161 Ga0496122_0005619 3300048925 Bacteria 14831
162 Ga0501041_0232072 3300049577 Unclassified 1159
163 Ga0501048_0295700 3300049582 Unclassified 1152
164 Ga0501071_0257545 3300049587 Unclassified 1317
165 Ga0501072_0050437 3300049588 Bacteria 3277
166 Ga0501075_0096659 3300049591 Bacteria 2241
167 Ga0501075_0131886 3300049591 Bacteria 1904
168 Ga0501077_0047346 3300049593 Bacteria 2732
169 Ga0501045_0056963 3300049824 Bacteria 2859
170 nmdc:mga0k408_291187_c1 3300050493 Unclassified 974
171 nmdc:mga09592_8279_c1 3300050508 Bacteria 8458
172 nmdc:mga06r32_488_c1 3300050510 Bacteria 34200
173 nmdc:mga0rr50_93915_c1 3300050513 Bacteria 2341
174 Ga0500644_0026845 3300053088 Bacteria 1785
175 Ga0500566_0006685 3300053094 Bacteria 6826
176 Ga0500641_0002254 3300053096 Bacteria 6830
177 Ga0500641_0027340 3300053096 Bacteria 2220
178 Ga0500593_000017 3300053117 Bacteria 56465
179 Ga0500594_0000303 3300053118 Bacteria 11081
180 Ga0500564_049524 3300053138 Bacteria 1924
181 Ga0501082_0072379 3300060353 Bacteria 2969
182 Ga0530510_0198364 3300061734 Unclassified 1490

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10047456 Ga0105240_100474561 201
2 3300013307 Ga0157372_10023440 Ga0157372_100234402 201
3 3300049577 Ga0501041_0232072 Ga0501041_0232072_235_975 208
4 3300049582 Ga0501048_0295700 Ga0501048_0295700_139_879 208
5 3300049587 Ga0501071_0257545 Ga0501071_0257545_210_950 208
6 3300049588 Ga0501072_0050437 Ga0501072_0050437_400_1140 208
7 3300049591 Ga0501075_0096659 Ga0501075_0096659_1485_2225 208
8 3300049593 Ga0501077_0047346 Ga0501077_0047346_1564_2304 208
9 3300049824 Ga0501045_0056963 Ga0501045_0056963_373_1113 208
10 3300060353 Ga0501082_0072379 Ga0501082_0072379_1816_2556 208
11 3300061734 Ga0530510_0198364 Ga0530510_0198364_296_1036 208
12 3300048917 Ga0496114_0219236 Ga0496114_0219236_604_1428 218
13 3300003322 rootL2_10108578 rootL2_101085782 220
14 3300005293 Ga0065715_10397897 Ga0065715_103978971 223
15 3300009094 Ga0111539_10791249 Ga0111539_107912492 223
16 3300013306 Ga0163162_10468541 Ga0163162_104685411 223
17 3300013308 Ga0157375_11188194 Ga0157375_111881941 223
18 3300028380 Ga0268265_10463631 Ga0268265_104636311 223
19 3300013297 Ga0157378_10934538 Ga0157378_109345381 224
20 3300028800 Ga0265338_10327525 Ga0265338_103275251 225
21 3300044673 Ga0453683_0037223 Ga0453683_0037223_1789_2595 226
22 3300005563 Ga0068855_100000048 Ga0068855_10000004858 227
23 3300009147 Ga0114129_10135464 Ga0114129_101354643 227
24 3300025949 Ga0207667_10000023 Ga0207667_10000023100 227
25 3300005614 Ga0068856_100000063 Ga0068856_10000006366 228
26 3300025304 Ga0209257_1067646 Ga0209257_10676462 228
27 3300026078 Ga0207702_10000508 Ga0207702_1000050816 228
28 3300053094 Ga0500566_0006685 Ga0500566_0006685_5982_6767 228
29 3300003214 JGI25165J46597_1000041 JGI25165J46597_1000041215 229
30 3300005548 Ga0070665_100334004 Ga0070665_1003340041 229
31 3300025233 Ga0209437_113565 Ga0209437_1135652 229
32 3300025261 Ga0209233_1000104 Ga0209233_1000104218 229
33 3300009094 Ga0111539_10107030 Ga0111539_101070303 230
34 3300025924 Ga0207694_10007561 Ga0207694_100075614 230
35 3300046492 Ga0495585_0024945 Ga0495585_0024945_226_999 230
36 3300014326 Ga0157380_10782156 Ga0157380_107821561 231
37 3300025303 Ga0209051_1002741 Ga0209051_10027416 231
38 3300025923 Ga0207681_10054909 Ga0207681_100549095 231
39 3300025933 Ga0207706_10380795 Ga0207706_103807952 231
40 3300044673 Ga0453683_0004247 Ga0453683_0004247_9094_9900 231
41 3300044673 Ga0453683_0117122 Ga0453683_0117122_71_877 231
42 3300045051 Ga0451576_0082144 Ga0451576_0082144_1332_2138 231
43 3300046507 Ga0495606_0027739 Ga0495606_0027739_281_1075 231
44 3300046810 Ga0495660_0000373 Ga0495660_0000373_29044_29838 231
45 3300053117 Ga0500593_000017 Ga0500593_000017_54337_55107 231
46 3300005457 Ga0070662_100260250 Ga0070662_1002602501 232
47 3300005548 Ga0070665_100056203 Ga0070665_1000562035 232
48 3300005563 Ga0068855_100000048 Ga0068855_10000004857 232
49 3300005842 Ga0068858_100000784 Ga0068858_1000007848 232
50 3300014745 Ga0157377_10242275 Ga0157377_102422752 232
51 3300025949 Ga0207667_10000023 Ga0207667_10000023101 232
52 3300028379 Ga0268266_10184527 Ga0268266_101845271 232
53 3300031852 Ga0307410_10063485 Ga0307410_100634851 232
54 3300031995 Ga0307409_100010326 Ga0307409_1000103263 232
55 3300046648 Ga0495611_0011563 Ga0495611_0011563_2351_3160 232
56 3300005289 Ga0065704_10080251 Ga0065704_100802513 233
57 3300026142 Ga0207698_10469776 Ga0207698_104697762 233
58 3300003323 rootH1_10362831 rootH1_103628312 234
59 3300005288 Ga0065714_10003273 Ga0065714_100032735 234
60 3300005347 Ga0070668_100334383 Ga0070668_1003343832 234
61 3300025961 Ga0207712_10342609 Ga0207712_103426091 234
62 3300046506 Ga0495583_0000102 Ga0495583_0000102_63913_64713 234
63 3300013102 Ga0157371_10016800 Ga0157371_100168005 235
64 3300027907 Ga0207428_10398441 Ga0207428_103984412 235
65 3300048925 Ga0496122_0005619 Ga0496122_0005619_8845_9636 236
66 3300053096 Ga0500641_0002254 Ga0500641_0002254_1487_2272 236
67 3300005331 Ga0070670_100003240 Ga0070670_1000032406 237
68 3300005353 Ga0070669_100512508 Ga0070669_1005125081 237
69 3300005365 Ga0070688_100053398 Ga0070688_1000533982 237
70 3300005466 Ga0070685_10012473 Ga0070685_100124732 237
71 3300005617 Ga0068859_100007719 Ga0068859_1000077196 237
72 3300005719 Ga0068861_100526785 Ga0068861_1005267851 237
73 3300005842 Ga0068858_100327155 Ga0068858_1003271552 237
74 3300006844 Ga0075428_100295513 Ga0075428_1002955133 237
75 3300006931 Ga0097620_100007719 Ga0097620_1000077195 237
76 3300025925 Ga0207650_10020771 Ga0207650_100207712 237
77 3300025961 Ga0207712_10063889 Ga0207712_100638892 237
78 3300026118 Ga0207675_100091176 Ga0207675_1000911762 237
79 3300048919 Ga0496116_0009910 Ga0496116_0009910_1351_2124 238
80 3300005330 Ga0070690_100129418 Ga0070690_1001294182 239
81 3300005467 Ga0070706_100000055 Ga0070706_10000005535 239
82 3300025910 Ga0207684_10000171 Ga0207684_1000017135 239
83 3300031616 Ga0307508_10009940 Ga0307508_100099407 239
84 3300033180 Ga0307510_10055252 Ga0307510_100552524 239
85 3300046454 Ga0495592_0000175 Ga0495592_0000175_40932_41729 239
86 3300046680 Ga0495646_0069450 Ga0495646_0069450_710_1507 239
87 3300049591 Ga0501075_0131886 Ga0501075_0131886_45_848 239
88 3300053088 Ga0500644_0026845 Ga0500644_0026845_93_890 239
89 3300053118 Ga0500594_0000303 Ga0500594_0000303_4678_5475 239
90 3300053138 Ga0500564_049524 Ga0500564_049524_752_1549 239
91 3300005445 Ga0070708_100027993 Ga0070708_1000279933 241
92 3300046519 Ga0495632_0000041 Ga0495632_0000041_17688_18512 242
93 3300046524 Ga0495648_0030040 Ga0495648_0030040_2419_3210 242
94 3300046665 Ga0495661_0006336 Ga0495661_0006336_4700_5524 242
95 3300026121 Ga0207683_10006174 Ga0207683_100061742 244
96 3300005354 Ga0070675_100156385 Ga0070675_1001563851 246
97 3300005356 Ga0070674_100018040 Ga0070674_1000180405 246
98 3300005364 Ga0070673_100583158 Ga0070673_1005831581 246
99 3300009174 Ga0105241_10458695 Ga0105241_104586952 246
100 3300009551 Ga0105238_10143716 Ga0105238_101437163 246
101 3300025923 Ga0207681_10280792 Ga0207681_102807922 246
102 3300025924 Ga0207694_10017861 Ga0207694_100178612 246
103 3300025960 Ga0207651_10149978 Ga0207651_101499782 246
104 3300046460 Ga0495638_0080223 Ga0495638_0080223_284_1090 246
105 3300046492 Ga0495585_0108159 Ga0495585_0108159_345_1151 246
106 3300046515 Ga0495620_0001649 Ga0495620_0001649_2360_3166 246
107 3300046528 Ga0495642_0003473 Ga0495642_0003473_5017_5823 246
108 3300046810 Ga0495660_0105768 Ga0495660_0105768_58_864 246
109 3300047323 Ga0495683_0072609 Ga0495683_0072609_272_1078 246
110 3300047443 Ga0495687_069199 Ga0495687_069199_514_1320 246
111 3300047470 Ga0495681_0039339 Ga0495681_0039339_218_1024 246
112 3300046615 Ga0495656_0029732 Ga0495656_0029732_783_1577 249
113 3300050513 nmdc:mga0rr50_93915_c1 nmdc:mga0rr50_93915_c1_140_910 249
114 3300006173 Ga0070716_100000018 Ga0070716_10000001845 250
115 3300025939 Ga0207665_10000022 Ga0207665_1000002274 250
116 iso_pu_bacteria 2775506987 2776613714 250
117 3300046616 Ga0495668_0000883 Ga0495668_0000883_25985_26788 251
118 iso_pu_bacteria 2919437846 2919438587 251
119 3300005331 Ga0070670_100161355 Ga0070670_1001613553 252
120 3300005333 Ga0070677_10006382 Ga0070677_100063821 252
121 3300005354 Ga0070675_100131749 Ga0070675_1001317493 252
122 3300005355 Ga0070671_100434695 Ga0070671_1004346951 252
123 3300005356 Ga0070674_100011179 Ga0070674_1000111792 252
124 3300005364 Ga0070673_100088168 Ga0070673_1000881681 252
125 3300005456 Ga0070678_100037518 Ga0070678_1000375181 252
126 3300005543 Ga0070672_100080476 Ga0070672_1000804762 252
127 3300005616 Ga0068852_100007509 Ga0068852_1000075094 252
128 3300025893 Ga0207682_10000700 Ga0207682_100007008 252
129 3300025926 Ga0207659_10236388 Ga0207659_102363882 252
130 3300025931 Ga0207644_10135835 Ga0207644_101358352 252
131 3300025937 Ga0207669_10001104 Ga0207669_100011048 252
132 3300025940 Ga0207691_10005050 Ga0207691_100050509 252
133 3300025960 Ga0207651_10043937 Ga0207651_100439371 252
134 3300026121 Ga0207683_10034012 Ga0207683_100340122 252
135 3300026142 Ga0207698_10005200 Ga0207698_100052005 252
136 3300046525 Ga0495663_0030592 Ga0495663_0030592_166_945 252
137 3300046537 Ga0495598_0017447 Ga0495598_0017447_610_1389 252
138 3300046539 Ga0495621_0007838 Ga0495621_0007838_1427_2206 252
139 3300044656 Ga0466969_0015723 Ga0466969_0015723_777_1580 253
140 3300044693 Ga0466961_0000481 Ga0466961_0000481_4945_5748 253
141 3300005329 Ga0070683_100272941 Ga0070683_1002729412 254
142 3300005458 Ga0070681_10125897 Ga0070681_101258973 254
143 3300007076 Ga0075435_100118077 Ga0075435_1001180772 254
144 3300025944 Ga0207661_10296736 Ga0207661_102967362 254
145 3300037418 Ga0395900_0002929 Ga0395900_0002929_9859_10713 254
146 3300037853 Ga0436364_0239191 Ga0436364_0239191_2330_3100 254
147 3300038443 Ga0395901_0032346 Ga0395901_0032346_4202_5056 254
148 3300005329 Ga0070683_100832044 Ga0070683_1008320441 255
149 3300005457 Ga0070662_100192620 Ga0070662_1001926202 255
150 3300005535 Ga0070684_100056593 Ga0070684_1000565935 255
151 3300006178 Ga0075367_10260250 Ga0075367_102602502 255
152 3300006946 Ga0079104_1001700 Ga0079104_10017007 255
153 3300009545 Ga0105237_10077125 Ga0105237_100771252 255
154 3300009551 Ga0105238_10003753 Ga0105238_100037536 255
155 3300013307 Ga0157372_10099006 Ga0157372_100990063 255
156 3300021361 Ga0213872_10044853 Ga0213872_100448531 255
157 3300025914 Ga0207671_10396801 Ga0207671_103968011 255
158 3300025933 Ga0207706_10227817 Ga0207706_102278172 255
159 3300027111 Ga0209281_1001361 Ga0209281_10013617 255
160 3300039437 Ga0436365_0324197 Ga0436365_0324197_254_1036 255
161 3300039447 Ga0436361_0536480 Ga0436361_0536480_1560_2339 255
162 3300044712 Ga0453684_0000691 Ga0453684_0000691_72166_72966 255
163 3300046460 Ga0495638_0000820 Ga0495638_0000820_3067_3843 255
164 3300046524 Ga0495648_0204188 Ga0495648_0204188_52_849 255
165 3300046660 Ga0495625_0234751 Ga0495625_0234751_148_924 255
166 3300047443 Ga0495687_000859 Ga0495687_000859_20745_21533 255
167 3300048918 Ga0496115_0620485 Ga0496115_0620485_56_838 255
168 3300050493 nmdc:mga0k408_291187_c1 nmdc:mga0k408_291187_c1_172_945 255
169 3300046523 Ga0495644_0126770 Ga0495644_0126770_123_923 256
170 3300003659 JGI25404J52841_10002834 JGI25404J52841_100028341 258
171 3300005983 Ga0081540_1001166 Ga0081540_100116629 258
172 3300002244 JGI24742J22300_10017867 JGI24742J22300_100178672 259
173 3300005347 Ga0070668_100533509 Ga0070668_1005335091 259
174 3300005468 Ga0070707_100019726 Ga0070707_1000197267 259
175 3300005471 Ga0070698_100101224 Ga0070698_1001012242 259
176 3300005518 Ga0070699_100395927 Ga0070699_1003959272 259
177 3300005548 Ga0070665_100241733 Ga0070665_1002417333 259
178 3300006847 Ga0075431_100002663 Ga0075431_1000026635 259
179 3300006847 Ga0075431_100065452 Ga0075431_1000654525 259
180 3300025922 Ga0207646_10009629 Ga0207646_100096298 259
181 3300025986 Ga0207658_10037869 Ga0207658_100378694 259
182 3300028379 Ga0268266_10169543 Ga0268266_101695432 259
183 3300035114 Ga0373939_0017998 Ga0373939_0017998_930_1715 259
184 3300050508 nmdc:mga09592_8279_c1 nmdc:mga09592_8279_c1_6954_7745 259
185 3300050510 nmdc:mga06r32_488_c1 nmdc:mga06r32_488_c1_22066_22857 259
186 3300053096 Ga0500641_0027340 Ga0500641_0027340_227_1012 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01510

Amidase_2

N-acetylmuramoyl-L-alanine amidase

32

170

0.82

PF01471

PG_binding_1

Putative peptidoglycan binding domain

212

271

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nm7-assembly2.cif.gz_A crystal structure of burkholderia ap3 phage endolysin 0.9888 201 257
5nm7-assembly1.cif.gz_G crystal structure of burkholderia ap3 phage endolysin 0.9884 201 257
5tv7-assembly2.cif.gz_B 2.05 angstrom resolution crystal structure of peptidoglycan-binding protein from clostridioides difficile in complex with glutamine hydroxamate. 0.9724 199 257
1lbu-assembly1.cif.gz_A hydrolase metallo (zn) dd-peptidase 0.9721 201 255
6tci-assembly1.cif.gz_A the crystal structure of sleb n-terminal domain 0.9695 199 257
ID Description Score Start End Superfamily
1lbuA01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.9721 201 255 1.10.101.10
3bkvA01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.9618 201 257 1.10.101.10
4lpqA01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.9531 202 257 1.10.101.10
af_E7F1N5_25_290_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.9388 230 257 3.40.390.10
af_I1N5Y3_46_297_3.40.390.10 Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Collagenase (Catalytic Domain) 0.891 202 255 3.40.390.10
ID Description Score Start End GO Terms
AF-S7TUP9-F1-model_v4 N-acetylmuramoyl-L-alanine amidase family 2 1.006 201 257 GO:0008745
GO:0009253
AF-M5U1K7-F1-model_v4 Peptidoglycan binding-like domain protein (EC 3.-.-.-) 1.006 205 257 GO:0016787
AF-A0A849GB57-F1-model_v4 Peptidoglycan-binding protein 1.004 201 257
AF-A0A1M6DT75-F1-model_v4 Peptidoglycan binding domain-containing protein 1.004 200 257
AF-A0A849GW96-F1-model_v4 Peptidoglycan-binding protein 1.003 201 257

Feature Viewer

pLDDT pTM Quality
90.85 0.75 High
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Predicted Structure (AlphaFold2)

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