F285124
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 185 | 137 | 184 | 330 |
Family's Representative Sequence
| Representative Sequence | 3300053156|Ga0500622_0009826|Ga0500622_0009826_356_1459 |
| Length | 367 |
| Sequence | LIVFQRIDNQGEYKQNYLLKNILYISGIETTVVLKIDSHTHILPKKLPNWTEKFGYGDFIYLQHHKKGFAKMMRGNQFFREIKENAWNPELRIREYEKFHTQVQVVCTIPVMFSYWANPLDCLDLSRFLNDHLAELVLKYPQNYLGLATIPMQDAELAIVELERCKQIGLSGVQIGSNINDLNLNEPRFYPIFEACEKLGMAMLVHPWNMMGQKQMQRYWLPWLVGMPAETSRAICSMIFGGIFEKLPQLRVNFAHAGGSFLPTIGRIQHGYDCRPDLVVIDNMHPPKDYLGRFWVDSVTHDPLMLEYVLKTLGSKRITLGSDYPFPLGDLEIGQYIEDMNLDDGVKEDIFYKAALEWLDLKKERFT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2671180531 | Gemmata sp. SH-PL17 | Isolate | Unclassified |
| 2 | 2881955468 | Edaphocola flava HME-24 | Isolate | Rhizosphere |
| 3 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 4 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 5 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 6 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 7 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 8 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 16 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 20 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 24 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 34 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 35 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 36 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 39 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 40 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 41 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 42 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 45 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 46 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 47 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 48 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 84 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 86 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 87 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 88 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 89 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 90 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 91 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 92 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 93 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 94 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 95 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 96 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 97 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 98 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 99 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 100 | 3300042135 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 | Metagenome | Rhizosphere |
| 101 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 102 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 103 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 104 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 105 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 106 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 118 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 119 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 120 | 3300049703 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control | Metagenome | Rhizosphere |
| 121 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 122 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 123 | 3300049761 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control | Metagenome | Rhizosphere |
| 124 | 3300050005 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought | Metagenome | Rhizosphere |
| 125 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 126 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 132 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 133 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 134 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 135 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 136 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 137 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.92 |
| Metatranscriptomes | 0 |
| Isolates | 1.08 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.19 |
| Nodule | 0 |
| Rhizoplane | 1.08 |
| Rhizosphere | 80 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.73 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10002819 | 3300003203 | Bacteria | 8177 |
| 2 | rootH1_10000284 | 3300003316 | Bacteria | 58926 |
| 3 | rootH2_10000321 | 3300003320 | Bacteria | 84740 |
| 4 | rootL2_10001244 | 3300003322 | Bacteria | 13257 |
| 5 | rootL2_10009100 | 3300003322 | Bacteria | 9845 |
| 6 | rootL2_10132146 | 3300003322 | Bacteria | 8273 |
| 7 | rootH1_10000712 | 3300003316 | Bacteria | 27638 |
| 8 | rootH1_10000712 | 3300003323 | Bacteria | 88392 |
| 9 | rootH1_10033562 | 3300003323 | Bacteria | 3078 |
| 10 | rootH1_10112786 | 3300003323 | Bacteria | 18142 |
| 11 | Ga0055531_10000087 | 3300003794 | Bacteria | 101553 |
| 12 | Ga0065165_1001451 | 3300005262 | Bacteria | 25653 |
| 13 | Ga0065707_10129913 | 3300005295 | Bacteria | 1939 |
| 14 | Ga0070676_10071348 | 3300005328 | Bacteria | 2086 |
| 15 | Ga0070676_10150182 | 3300005328 | Bacteria | 1491 |
| 16 | Ga0070670_100076169 | 3300005331 | Bacteria | 2882 |
| 17 | Ga0070670_100085064 | 3300005331 | Bacteria | 2717 |
| 18 | Ga0068869_100066241 | 3300005334 | Bacteria | 2660 |
| 19 | Ga0070682_100000005 | 3300005337 | Bacteria | 386439 |
| 20 | Ga0070689_100384997 | 3300005340 | Bacteria | 1183 |
| 21 | Ga0070669_100001238 | 3300005353 | Bacteria | 18500 |
| 22 | Ga0070671_100026953 | 3300005355 | Unclassified | 4727 |
| 23 | Ga0070671_100198927 | 3300005355 | Bacteria | 1699 |
| 24 | Ga0070673_100002836 | 3300005364 | Bacteria | 10670 |
| 25 | Ga0070688_100003767 | 3300005365 | Bacteria | 7856 |
| 26 | Ga0070694_100052859 | 3300005444 | Bacteria | 2747 |
| 27 | Ga0070678_100200077 | 3300005456 | Bacteria | 1648 |
| 28 | Ga0070662_100006364 | 3300005457 | Bacteria | 7605 |
| 29 | Ga0068867_100018175 | 3300005459 | Bacteria | 4996 |
| 30 | Ga0068867_100110510 | 3300005459 | Bacteria | 2111 |
| 31 | Ga0070698_100303362 | 3300005471 | Bacteria | 1528 |
| 32 | Ga0070699_100142521 | 3300005518 | Unclassified | 2117 |
| 33 | Ga0068853_100083121 | 3300005539 | Unclassified | 2805 |
| 34 | Ga0070672_100285861 | 3300005543 | Bacteria | 1395 |
| 35 | Ga0068855_100252204 | 3300005563 | Bacteria | 1968 |
| 36 | Ga0070664_100027889 | 3300005564 | Unclassified | 4696 |
| 37 | Ga0068857_100195223 | 3300005577 | Bacteria | 1844 |
| 38 | Ga0070702_100175777 | 3300005615 | Bacteria | 1397 |
| 39 | Ga0068852_100232385 | 3300005616 | Bacteria | 1758 |
| 40 | Ga0068859_100236093 | 3300005617 | Bacteria | 1917 |
| 41 | Ga0068861_100009559 | 3300005719 | Bacteria | 6699 |
| 42 | Ga0068861_100010538 | 3300005719 | Bacteria | 6418 |
| 43 | Ga0068870_10007286 | 3300005840 | Bacteria | 4927 |
| 44 | Ga0068863_100256542 | 3300005841 | Bacteria | 1690 |
| 45 | Ga0068858_100444547 | 3300005842 | Bacteria | 1249 |
| 46 | Ga0068862_100022129 | 3300005844 | Bacteria | 5320 |
| 47 | Ga0081539_10000037 | 3300005985 | Bacteria | 296160 |
| 48 | Ga0070716_100054457 | 3300006173 | Bacteria | 2285 |
| 49 | Ga0075366_10017779 | 3300006195 | Bacteria | 4099 |
| 50 | Ga0097621_100209547 | 3300006237 | Bacteria | 1695 |
| 51 | Ga0075428_100000041 | 3300006844 | Bacteria | 102565 |
| 52 | Ga0075428_100037309 | 3300006844 | Bacteria | 5351 |
| 53 | Ga0075430_100018740 | 3300006846 | Bacteria | 5890 |
| 54 | Ga0075430_100145271 | 3300006846 | Bacteria | 1976 |
| 55 | Ga0075431_100002546 | 3300006847 | Bacteria | 17595 |
| 56 | Ga0075433_10021029 | 3300006852 | Bacteria | 5466 |
| 57 | Ga0075429_100000878 | 3300006880 | Bacteria | 23738 |
| 58 | Ga0097620_100236091 | 3300006931 | Bacteria | 1917 |
| 59 | Ga0111539_10007760 | 3300009094 | Bacteria | 13703 |
| 60 | Ga0111539_10066396 | 3300009094 | Bacteria | 4261 |
| 61 | Ga0114129_10377259 | 3300009147 | Bacteria | 1874 |
| 62 | Ga0105249_10005718 | 3300009553 | Bacteria | 10751 |
| 63 | Ga0105246_10396884 | 3300011119 | Bacteria | 1144 |
| 64 | Ga0157373_10211860 | 3300013100 | Bacteria | 1366 |
| 65 | Ga0157371_10011568 | 3300013102 | Bacteria | 6785 |
| 66 | Ga0157370_10030982 | 3300013104 | Bacteria | 5237 |
| 67 | Ga0157374_10315369 | 3300013296 | Bacteria | 1549 |
| 68 | Ga0157378_10101314 | 3300013297 | Bacteria | 2630 |
| 69 | Ga0163162_10005134 | 3300013306 | Bacteria | 12619 |
| 70 | Ga0163162_10090940 | 3300013306 | Bacteria | 3134 |
| 71 | Ga0157372_10000901 | 3300013307 | Bacteria | 32275 |
| 72 | Ga0157375_10190663 | 3300013308 | Bacteria | 2205 |
| 73 | Ga0157380_10000027 | 3300014326 | Bacteria | 101082 |
| 74 | Ga0157380_10004279 | 3300014326 | Bacteria | 9885 |
| 75 | Ga0157380_10005627 | 3300014326 | Bacteria | 8758 |
| 76 | Ga0157380_10030959 | 3300014326 | Unclassified | 4103 |
| 77 | Ga0157380_10051918 | 3300014326 | Bacteria | 3245 |
| 78 | Ga0157380_10082748 | 3300014326 | Bacteria | 2628 |
| 79 | Ga0157380_10329812 | 3300014326 | Bacteria | 1419 |
| 80 | Ga0157377_10000827 | 3300014745 | Bacteria | 12822 |
| 81 | Ga0209050_1012659 | 3300025298 | Bacteria | 3841 |
| 82 | Ga0209050_1017002 | 3300025298 | Bacteria | 2933 |
| 83 | Ga0209257_1000006 | 3300025304 | Bacteria | 1570111 |
| 84 | Ga0207688_10017289 | 3300025901 | Unclassified | 3919 |
| 85 | Ga0207645_10071503 | 3300025907 | Bacteria | 2220 |
| 86 | Ga0207643_10011996 | 3300025908 | Unclassified | 4679 |
| 87 | Ga0207650_10137401 | 3300025925 | Bacteria | 1919 |
| 88 | Ga0207659_10266552 | 3300025926 | Bacteria | 1396 |
| 89 | Ga0207706_10010994 | 3300025933 | Bacteria | 8252 |
| 90 | Ga0207665_10041868 | 3300025939 | Bacteria | 3061 |
| 91 | Ga0207691_10176204 | 3300025940 | Bacteria | 1870 |
| 92 | Ga0207689_10204420 | 3300025942 | Bacteria | 1631 |
| 93 | Ga0207679_10023050 | 3300025945 | Unclassified | 4250 |
| 94 | Ga0207679_10356165 | 3300025945 | Bacteria | 1277 |
| 95 | Ga0207667_10215183 | 3300025949 | Bacteria | 1969 |
| 96 | Ga0207639_10104940 | 3300026041 | Bacteria | 2292 |
| 97 | Ga0207708_10216805 | 3300026075 | Bacteria | 1532 |
| 98 | Ga0207641_10234561 | 3300026088 | Bacteria | 1707 |
| 99 | Ga0207648_10031485 | 3300026089 | Bacteria | 4690 |
| 100 | Ga0207674_10123695 | 3300026116 | Bacteria | 2553 |
| 101 | Ga0207674_10607487 | 3300026116 | Bacteria | 1056 |
| 102 | Ga0207675_100000762 | 3300026118 | Bacteria | 32039 |
| 103 | Ga0207675_100002685 | 3300026118 | Bacteria | 17555 |
| 104 | Ga0207675_100377487 | 3300026118 | Bacteria | 1393 |
| 105 | Ga0207683_10031618 | 3300026121 | Bacteria | 4593 |
| 106 | Ga0207428_10036791 | 3300027907 | Bacteria | 3988 |
| 107 | Ga0268265_10032886 | 3300028380 | Bacteria | 3764 |
| 108 | Ga0307515_10000010 | 3300028794 | Bacteria | 651586 |
| 109 | Ga0307515_10000681 | 3300028794 | Bacteria | 78150 |
| 110 | Ga0307515_10088313 | 3300028794 | Bacteria | 3920 |
| 111 | Ga0265327_10000219 | 3300031251 | Bacteria | 116606 |
| 112 | Ga0265327_10009514 | 3300031251 | Bacteria | 6998 |
| 113 | Ga0307513_10088049 | 3300031456 | Bacteria | 3175 |
| 114 | Ga0307509_10017961 | 3300031507 | Bacteria | 8122 |
| 115 | Ga0307509_10263166 | 3300031507 | Bacteria | 1498 |
| 116 | Ga0307408_100170152 | 3300031548 | Bacteria | 1739 |
| 117 | Ga0307514_10078433 | 3300031649 | Bacteria | 2453 |
| 118 | Ga0307413_10366461 | 3300031824 | Unclassified | 1117 |
| 119 | Ga0307406_10048950 | 3300031901 | Bacteria | 2673 |
| 120 | Ga0307411_10017073 | 3300032005 | Bacteria | 4124 |
| 121 | Ga0307411_10159879 | 3300032005 | Bacteria | 1686 |
| 122 | Ga0307415_100084988 | 3300032126 | Bacteria | 2272 |
| 123 | Ga0395899_0000040 | 3300037312 | Bacteria | 261561 |
| 124 | Ga0395905_0000001 | 3300037471 | Bacteria | 2037079 |
| 125 | Ga0436364_0100627 | 3300037853 | Bacteria | 2062 |
| 126 | Ga0451791_0412068 | 3300041451 | Bacteria | 1135 |
| 127 | Ga0451843_0224169 | 3300041509 | Bacteria | 1548 |
| 128 | Ga0450899_002868 | 3300042135 | Bacteria | 1865 |
| 129 | Ga0439434_0009537 | 3300042435 | Bacteria | 2856 |
| 130 | Ga0451577_0014603 | 3300042876 | Bacteria | 7317 |
| 131 | Ga0451577_0015488 | 3300042876 | Bacteria | 7094 |
| 132 | Ga0451577_0032947 | 3300042876 | Bacteria | 4670 |
| 133 | Ga0451577_0291680 | 3300042876 | Unclassified | 1478 |
| 134 | Ga0453683_0019283 | 3300044673 | Bacteria | 4371 |
| 135 | Ga0453683_0209734 | 3300044673 | Bacteria | 1237 |
| 136 | Ga0453684_0003210 | 3300044712 | Bacteria | 37486 |
| 137 | Ga0453684_0025914 | 3300044712 | Bacteria | 8491 |
| 138 | Ga0451576_0000002 | 3300045051 | Bacteria | 1670975 |
| 139 | Ga0451576_0006463 | 3300045051 | Bacteria | 14370 |
| 140 | Ga0451576_0020174 | 3300045051 | Bacteria | 7262 |
| 141 | Ga0451576_0056214 | 3300045051 | Bacteria | 4117 |
| 142 | Ga0451576_0115403 | 3300045051 | Bacteria | 2796 |
| 143 | Ga0495638_0000003 | 3300046460 | Bacteria | 888792 |
| 144 | Ga0495638_0031019 | 3300046460 | Bacteria | 3437 |
| 145 | Ga0495594_0036249 | 3300046499 | Bacteria | 2689 |
| 146 | Ga0495630_0167350 | 3300046517 | Bacteria | 1674 |
| 147 | Ga0495668_0000097 | 3300046616 | Bacteria | 139246 |
| 148 | Ga0495634_0095923 | 3300046642 | Bacteria | 1921 |
| 149 | Ga0495625_0159690 | 3300046660 | Bacteria | 1511 |
| 150 | Ga0495635_0278094 | 3300046663 | Bacteria | 1125 |
| 151 | Ga0495686_0000261 | 3300047472 | Bacteria | 94540 |
| 152 | Ga0496114_0001407 | 3300048917 | Bacteria | 18259 |
| 153 | Ga0501034_0000115 | 3300049571 | Bacteria | 146825 |
| 154 | Ga0501047_0113778 | 3300049581 | Bacteria | 2588 |
| 155 | Ga0501202_007724 | 3300049652 | Bacteria | 1948 |
| 156 | Ga0501257_002600 | 3300049686 | Unclassified | 3804 |
| 157 | Ga0501257_037376 | 3300049686 | Bacteria | 1184 |
| 158 | Ga0501261_004319 | 3300049690 | Unclassified | 1752 |
| 159 | Ga0501219_000283 | 3300049703 | Bacteria | 9024 |
| 160 | Ga0501225_0017775 | 3300049705 | Bacteria | 1973 |
| 161 | Ga0501225_0045753 | 3300049705 | Unclassified | 1212 |
| 162 | Ga0501241_000757 | 3300049758 | Bacteria | 6943 |
| 163 | Ga0501264_001321 | 3300049761 | Bacteria | 2723 |
| 164 | Ga0501284_00041 | 3300050005 | Bacteria | 50589 |
| 165 | nmdc:mga0k408_79861_c1 | 3300050493 | Bacteria | 1914 |
| 166 | nmdc:mga05p37_244397_c1 | 3300050507 | Bacteria | 2156 |
| 167 | nmdc:mga05p37_3306_c1 | 3300050507 | Bacteria | 18809 |
| 168 | nmdc:mga09592_212638_c1 | 3300050508 | Bacteria | 1676 |
| 169 | nmdc:mga09592_854_c1 | 3300050508 | Bacteria | 23738 |
| 170 | nmdc:mga0qj67_14788_c1 | 3300050509 | Bacteria | 5900 |
| 171 | nmdc:mga0qj67_184834_c1 | 3300050509 | Bacteria | 1693 |
| 172 | nmdc:mga0qj67_26445_c1 | 3300050509 | Bacteria | 4492 |
| 173 | nmdc:mga06r32_482_c2 | 3300050510 | Bacteria | 32195 |
| 174 | nmdc:mga08y16_117260_c1 | 3300050511 | Bacteria | 2771 |
| 175 | Ga0500583_0013856 | 3300053092 | Unclassified | 3136 |
| 176 | Ga0500651_0165428 | 3300053093 | Unclassified | 1321 |
| 177 | Ga0500568_0004712 | 3300053139 | Bacteria | 7234 |
| 178 | Ga0500616_0000007 | 3300053153 | Bacteria | 836875 |
| 179 | Ga0500616_0060879 | 3300053153 | Bacteria | 1956 |
| 180 | Ga0500622_0000006 | 3300053156 | Bacteria | 464021 |
| 181 | Ga0500622_0000213 | 3300053156 | Bacteria | 61430 |
| 182 | Ga0500622_0009826 | 3300053156 | Bacteria | 5282 |
| 183 | Ga0500627_0004139 | 3300053158 | Bacteria | 4607 |
| 184 | Ga0500611_000077 | 3300053727 | Bacteria | 38126 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046663 | Ga0495635_0278094 | Ga0495635_0278094_36_839 | 267 |
| 2 | 3300025945 | Ga0207679_10356165 | Ga0207679_103561651 | 291 |
| 3 | 3300003794 | Ga0055531_10000087 | Ga0055531_1000008778 | 292 |
| 4 | 3300005262 | Ga0065165_1001451 | Ga0065165_100145117 | 292 |
| 5 | 3300011119 | Ga0105246_10396884 | Ga0105246_103968841 | 292 |
| 6 | 3300013100 | Ga0157373_10211860 | Ga0157373_102118601 | 292 |
| 7 | 3300025304 | Ga0209257_1000006 | Ga0209257_1000006403 | 292 |
| 8 | 3300026116 | Ga0207674_10607487 | Ga0207674_106074871 | 292 |
| 9 | 3300031507 | Ga0307509_10017961 | Ga0307509_100179614 | 292 |
| 10 | 3300042876 | Ga0451577_0291680 | Ga0451577_0291680_566_1459 | 292 |
| 11 | 3300053093 | Ga0500651_0165428 | Ga0500651_0165428_28_918 | 292 |
| 12 | 3300013308 | Ga0157375_10190663 | Ga0157375_101906632 | 293 |
| 13 | 3300025942 | Ga0207689_10204420 | Ga0207689_102044202 | 300 |
| 14 | 3300005842 | Ga0068858_100444547 | Ga0068858_1004445471 | 315 |
| 15 | 3300025901 | Ga0207688_10017289 | Ga0207688_100172894 | 315 |
| 16 | 3300025940 | Ga0207691_10176204 | Ga0207691_101762042 | 315 |
| 17 | 3300025945 | Ga0207679_10023050 | Ga0207679_100230503 | 315 |
| 18 | 3300044673 | Ga0453683_0209734 | Ga0453683_0209734_162_1136 | 316 |
| 19 | 3300005331 | Ga0070670_100085064 | Ga0070670_1000850644 | 317 |
| 20 | 3300005340 | Ga0070689_100384997 | Ga0070689_1003849971 | 317 |
| 21 | 3300005355 | Ga0070671_100026953 | Ga0070671_1000269532 | 317 |
| 22 | 3300005459 | Ga0068867_100110510 | Ga0068867_1001105101 | 317 |
| 23 | 3300005543 | Ga0070672_100285861 | Ga0070672_1002858612 | 317 |
| 24 | 3300005615 | Ga0070702_100175777 | Ga0070702_1001757772 | 317 |
| 25 | 3300013306 | Ga0163162_10090940 | Ga0163162_100909404 | 317 |
| 26 | 3300025926 | Ga0207659_10266552 | Ga0207659_102665522 | 317 |
| 27 | 3300026075 | Ga0207708_10216805 | Ga0207708_102168052 | 317 |
| 28 | 3300041451 | Ga0451791_0412068 | Ga0451791_0412068_96_1052 | 318 |
| 29 | 3300006195 | Ga0075366_10017779 | Ga0075366_100177792 | 319 |
| 30 | 3300013296 | Ga0157374_10315369 | Ga0157374_103153692 | 319 |
| 31 | 3300014326 | Ga0157380_10329812 | Ga0157380_103298122 | 319 |
| 32 | 3300028380 | Ga0268265_10032886 | Ga0268265_100328863 | 319 |
| 33 | 3300046642 | Ga0495634_0095923 | Ga0495634_0095923_312_1271 | 319 |
| 34 | 3300047472 | Ga0495686_0000261 | Ga0495686_0000261_63539_64501 | 319 |
| 35 | 3300050493 | nmdc:mga0k408_79861_c1 | nmdc:mga0k408_79861_c1_727_1713 | 319 |
| 36 | 3300050511 | nmdc:mga08y16_117260_c1 | nmdc:mga08y16_117260_c1_1429_2436 | 319 |
| 37 | 3300005459 | Ga0068867_100018175 | Ga0068867_1000181756 | 320 |
| 38 | 3300026118 | Ga0207675_100377487 | Ga0207675_1003774872 | 320 |
| 39 | 3300005295 | Ga0065707_10129913 | Ga0065707_101299132 | 321 |
| 40 | 3300005328 | Ga0070676_10150182 | Ga0070676_101501822 | 321 |
| 41 | 3300005337 | Ga0070682_100000005 | Ga0070682_100000005214 | 321 |
| 42 | 3300005353 | Ga0070669_100001238 | Ga0070669_10000123817 | 321 |
| 43 | 3300005364 | Ga0070673_100002836 | Ga0070673_10000283612 | 321 |
| 44 | 3300005365 | Ga0070688_100003767 | Ga0070688_1000037676 | 321 |
| 45 | 3300005457 | Ga0070662_100006364 | Ga0070662_1000063646 | 321 |
| 46 | 3300005577 | Ga0068857_100195223 | Ga0068857_1001952232 | 321 |
| 47 | 3300005719 | Ga0068861_100009559 | Ga0068861_1000095592 | 321 |
| 48 | 3300005840 | Ga0068870_10007286 | Ga0068870_100072864 | 321 |
| 49 | 3300005844 | Ga0068862_100022129 | Ga0068862_1000221291 | 321 |
| 50 | 3300013104 | Ga0157370_10030982 | Ga0157370_100309823 | 321 |
| 51 | 3300013297 | Ga0157378_10101314 | Ga0157378_101013144 | 321 |
| 52 | 3300014326 | Ga0157380_10005627 | Ga0157380_100056272 | 321 |
| 53 | 3300014326 | Ga0157380_10030959 | Ga0157380_100309593 | 321 |
| 54 | 3300014745 | Ga0157377_10000827 | Ga0157377_1000082710 | 321 |
| 55 | 3300025907 | Ga0207645_10071503 | Ga0207645_100715032 | 321 |
| 56 | 3300025908 | Ga0207643_10011996 | Ga0207643_100119965 | 321 |
| 57 | 3300025933 | Ga0207706_10010994 | Ga0207706_100109943 | 321 |
| 58 | 3300026118 | Ga0207675_100000762 | Ga0207675_10000076212 | 321 |
| 59 | 3300048917 | Ga0496114_0001407 | Ga0496114_0001407_16430_17401 | 321 |
| 60 | 3300049571 | Ga0501034_0000115 | Ga0501034_0000115_78691_79692 | 321 |
| 61 | iso_pu_bacteria | 2881955468 | 2881956470 | 326 |
| 62 | 3300005471 | Ga0070698_100303362 | Ga0070698_1003033622 | 327 |
| 63 | iso_pu_bacteria | 2671180531 | 2673162363 | 327 |
| 64 | 3300005328 | Ga0070676_10071348 | Ga0070676_100713482 | 328 |
| 65 | 3300005331 | Ga0070670_100076169 | Ga0070670_1000761693 | 328 |
| 66 | 3300005444 | Ga0070694_100052859 | Ga0070694_1000528593 | 328 |
| 67 | 3300005564 | Ga0070664_100027889 | Ga0070664_1000278895 | 328 |
| 68 | 3300005617 | Ga0068859_100236093 | Ga0068859_1002360931 | 328 |
| 69 | 3300005719 | Ga0068861_100010538 | Ga0068861_1000105385 | 328 |
| 70 | 3300006844 | Ga0075428_100000041 | Ga0075428_10000004136 | 328 |
| 71 | 3300006846 | Ga0075430_100018740 | Ga0075430_1000187403 | 328 |
| 72 | 3300006847 | Ga0075431_100002546 | Ga0075431_10000254617 | 328 |
| 73 | 3300006852 | Ga0075433_10021029 | Ga0075433_100210293 | 328 |
| 74 | 3300006880 | Ga0075429_100000878 | Ga0075429_1000008789 | 328 |
| 75 | 3300006931 | Ga0097620_100236091 | Ga0097620_1002360912 | 328 |
| 76 | 3300009147 | Ga0114129_10377259 | Ga0114129_103772592 | 328 |
| 77 | 3300009553 | Ga0105249_10005718 | Ga0105249_100057188 | 328 |
| 78 | 3300013306 | Ga0163162_10005134 | Ga0163162_100051345 | 328 |
| 79 | 3300025925 | Ga0207650_10137401 | Ga0207650_101374011 | 328 |
| 80 | 3300026118 | Ga0207675_100002685 | Ga0207675_1000026855 | 328 |
| 81 | 3300031251 | Ga0265327_10009514 | Ga0265327_100095142 | 328 |
| 82 | 3300031901 | Ga0307406_10048950 | Ga0307406_100489503 | 328 |
| 83 | 3300045051 | Ga0451576_0056214 | Ga0451576_0056214_45_1073 | 328 |
| 84 | 3300046616 | Ga0495668_0000097 | Ga0495668_0000097_62893_63882 | 328 |
| 85 | 3300049690 | Ga0501261_004319 | Ga0501261_004319_475_1464 | 328 |
| 86 | 3300050507 | nmdc:mga05p37_244397_c1 | nmdc:mga05p37_244397_c1_407_1435 | 328 |
| 87 | 3300050507 | nmdc:mga05p37_3306_c1 | nmdc:mga05p37_3306_c1_11991_13067 | 328 |
| 88 | 3300050508 | nmdc:mga09592_212638_c1 | nmdc:mga09592_212638_c1_255_1241 | 328 |
| 89 | 3300050508 | nmdc:mga09592_854_c1 | nmdc:mga09592_854_c1_11981_13009 | 328 |
| 90 | 3300050509 | nmdc:mga0qj67_14788_c1 | nmdc:mga0qj67_14788_c1_1254_2282 | 328 |
| 91 | 3300050509 | nmdc:mga0qj67_26445_c1 | nmdc:mga0qj67_26445_c1_2097_3083 | 328 |
| 92 | 3300050510 | nmdc:mga06r32_482_c2 | nmdc:mga06r32_482_c2_5831_6859 | 328 |
| 93 | 3300053139 | Ga0500568_0004712 | Ga0500568_0004712_4006_4992 | 328 |
| 94 | 3300053158 | Ga0500627_0004139 | Ga0500627_0004139_2151_3140 | 328 |
| 95 | 3300003316 | rootH1_10000284 | rootH1_1000028419 | 329 |
| 96 | 3300003320 | rootH2_10000321 | rootH2_1000032152 | 329 |
| 97 | 3300003322 | rootL2_10001244 | rootL2_1000124410 | 329 |
| 98 | 3300003322 | rootL2_10009100 | rootL2_100091003 | 329 |
| 99 | 3300003322 | rootL2_10132146 | rootL2_101321465 | 329 |
| 100 | 3300003323 | rootH1_10000712 | rootH1_1000071252 | 329 |
| 101 | 3300003323 | rootH1_10033562 | rootH1_100335625 | 329 |
| 102 | 3300005355 | Ga0070671_100198927 | Ga0070671_1001989271 | 329 |
| 103 | 3300005563 | Ga0068855_100252204 | Ga0068855_1002522042 | 329 |
| 104 | 3300005616 | Ga0068852_100232385 | Ga0068852_1002323852 | 329 |
| 105 | 3300005841 | Ga0068863_100256542 | Ga0068863_1002565422 | 329 |
| 106 | 3300006173 | Ga0070716_100054457 | Ga0070716_1000544573 | 329 |
| 107 | 3300006237 | Ga0097621_100209547 | Ga0097621_1002095471 | 329 |
| 108 | 3300006844 | Ga0075428_100037309 | Ga0075428_1000373091 | 329 |
| 109 | 3300006846 | Ga0075430_100145271 | Ga0075430_1001452713 | 329 |
| 110 | 3300009094 | Ga0111539_10007760 | Ga0111539_1000776011 | 329 |
| 111 | 3300009094 | Ga0111539_10066396 | Ga0111539_100663964 | 329 |
| 112 | 3300013102 | Ga0157371_10011568 | Ga0157371_100115684 | 329 |
| 113 | 3300013307 | Ga0157372_10000901 | Ga0157372_1000090123 | 329 |
| 114 | 3300014326 | Ga0157380_10000027 | Ga0157380_1000002736 | 329 |
| 115 | 3300014326 | Ga0157380_10004279 | Ga0157380_100042795 | 329 |
| 116 | 3300014326 | Ga0157380_10082748 | Ga0157380_100827481 | 329 |
| 117 | 3300025298 | Ga0209050_1012659 | Ga0209050_10126594 | 329 |
| 118 | 3300025298 | Ga0209050_1017002 | Ga0209050_10170023 | 329 |
| 119 | 3300025939 | Ga0207665_10041868 | Ga0207665_100418683 | 329 |
| 120 | 3300025949 | Ga0207667_10215183 | Ga0207667_102151832 | 329 |
| 121 | 3300026088 | Ga0207641_10234561 | Ga0207641_102345612 | 329 |
| 122 | 3300027907 | Ga0207428_10036791 | Ga0207428_100367913 | 329 |
| 123 | 3300028794 | Ga0307515_10000681 | Ga0307515_1000068112 | 329 |
| 124 | 3300028794 | Ga0307515_10088313 | Ga0307515_100883132 | 329 |
| 125 | 3300031456 | Ga0307513_10088049 | Ga0307513_100880494 | 329 |
| 126 | 3300031507 | Ga0307509_10263166 | Ga0307509_102631662 | 329 |
| 127 | 3300031548 | Ga0307408_100170152 | Ga0307408_1001701522 | 329 |
| 128 | 3300031649 | Ga0307514_10078433 | Ga0307514_100784332 | 329 |
| 129 | 3300037312 | Ga0395899_0000040 | Ga0395899_0000040_47067_48071 | 329 |
| 130 | 3300037471 | Ga0395905_0000001 | Ga0395905_0000001_1212977_1213996 | 329 |
| 131 | 3300042876 | Ga0451577_0014603 | Ga0451577_0014603_3617_4648 | 329 |
| 132 | 3300042876 | Ga0451577_0015488 | Ga0451577_0015488_5076_6083 | 329 |
| 133 | 3300042876 | Ga0451577_0032947 | Ga0451577_0032947_3353_4360 | 329 |
| 134 | 3300044673 | Ga0453683_0019283 | Ga0453683_0019283_2113_3123 | 329 |
| 135 | 3300044712 | Ga0453684_0025914 | Ga0453684_0025914_7111_8118 | 329 |
| 136 | 3300045051 | Ga0451576_0000002 | Ga0451576_0000002_440474_441493 | 329 |
| 137 | 3300045051 | Ga0451576_0006463 | Ga0451576_0006463_1527_2537 | 329 |
| 138 | 3300045051 | Ga0451576_0020174 | Ga0451576_0020174_706_1713 | 329 |
| 139 | 3300045051 | Ga0451576_0115403 | Ga0451576_0115403_384_1391 | 329 |
| 140 | 3300046460 | Ga0495638_0000003 | Ga0495638_0000003_375867_376874 | 329 |
| 141 | 3300046517 | Ga0495630_0167350 | Ga0495630_0167350_543_1565 | 329 |
| 142 | 3300046660 | Ga0495625_0159690 | Ga0495625_0159690_349_1434 | 329 |
| 143 | 3300049652 | Ga0501202_007724 | Ga0501202_007724_240_1247 | 329 |
| 144 | 3300049686 | Ga0501257_002600 | Ga0501257_002600_1168_2175 | 329 |
| 145 | 3300049686 | Ga0501257_037376 | Ga0501257_037376_59_1066 | 329 |
| 146 | 3300049703 | Ga0501219_000283 | Ga0501219_000283_6775_7764 | 329 |
| 147 | 3300049705 | Ga0501225_0017775 | Ga0501225_0017775_307_1314 | 329 |
| 148 | 3300049758 | Ga0501241_000757 | Ga0501241_000757_3642_4664 | 329 |
| 149 | 3300049761 | Ga0501264_001321 | Ga0501264_001321_772_1779 | 329 |
| 150 | 3300050005 | Ga0501284_00041 | Ga0501284_00041_42896_43885 | 329 |
| 151 | 3300050509 | nmdc:mga0qj67_184834_c1 | nmdc:mga0qj67_184834_c1_606_1658 | 329 |
| 152 | 3300053092 | Ga0500583_0013856 | Ga0500583_0013856_581_1588 | 329 |
| 153 | 3300053153 | Ga0500616_0000007 | Ga0500616_0000007_417680_418687 | 329 |
| 154 | 3300053153 | Ga0500616_0060879 | Ga0500616_0060879_538_1545 | 329 |
| 155 | 3300053156 | Ga0500622_0000006 | Ga0500622_0000006_366445_367452 | 329 |
| 156 | 3300053156 | Ga0500622_0000213 | Ga0500622_0000213_33428_34435 | 329 |
| 157 | 3300053156 | Ga0500622_0009826 | Ga0500622_0009826_356_1459 | 329 |
| 158 | 3300003203 | JGI25406J46586_10002819 | JGI25406J46586_100028193 | 330 |
| 159 | 3300003323 | rootH1_10112786 | rootH1_1011278615 | 330 |
| 160 | 3300005334 | Ga0068869_100066241 | Ga0068869_1000662414 | 330 |
| 161 | 3300005456 | Ga0070678_100200077 | Ga0070678_1002000772 | 330 |
| 162 | 3300005518 | Ga0070699_100142521 | Ga0070699_1001425212 | 330 |
| 163 | 3300005539 | Ga0068853_100083121 | Ga0068853_1000831212 | 330 |
| 164 | 3300005985 | Ga0081539_10000037 | Ga0081539_1000003775 | 330 |
| 165 | 3300014326 | Ga0157380_10051918 | Ga0157380_100519182 | 330 |
| 166 | 3300026041 | Ga0207639_10104940 | Ga0207639_101049403 | 330 |
| 167 | 3300026089 | Ga0207648_10031485 | Ga0207648_100314855 | 330 |
| 168 | 3300026116 | Ga0207674_10123695 | Ga0207674_101236953 | 330 |
| 169 | 3300026121 | Ga0207683_10031618 | Ga0207683_100316181 | 330 |
| 170 | 3300028794 | Ga0307515_10000010 | Ga0307515_10000010155 | 330 |
| 171 | 3300031251 | Ga0265327_10000219 | Ga0265327_1000021953 | 330 |
| 172 | 3300031824 | Ga0307413_10366461 | Ga0307413_103664611 | 330 |
| 173 | 3300032005 | Ga0307411_10017073 | Ga0307411_100170733 | 330 |
| 174 | 3300032005 | Ga0307411_10159879 | Ga0307411_101598792 | 330 |
| 175 | 3300032126 | Ga0307415_100084988 | Ga0307415_1000849882 | 330 |
| 176 | 3300037853 | Ga0436364_0100627 | Ga0436364_0100627_429_1442 | 330 |
| 177 | 3300041509 | Ga0451843_0224169 | Ga0451843_0224169_424_1434 | 330 |
| 178 | 3300042135 | Ga0450899_002868 | Ga0450899_002868_161_1153 | 330 |
| 179 | 3300042435 | Ga0439434_0009537 | Ga0439434_0009537_203_1201 | 330 |
| 180 | 3300044712 | Ga0453684_0003210 | Ga0453684_0003210_35938_36951 | 330 |
| 181 | 3300046460 | Ga0495638_0031019 | Ga0495638_0031019_2238_3257 | 330 |
| 182 | 3300046499 | Ga0495594_0036249 | Ga0495594_0036249_844_1866 | 330 |
| 183 | 3300049581 | Ga0501047_0113778 | Ga0501047_0113778_440_1450 | 330 |
| 184 | 3300049705 | Ga0501225_0045753 | Ga0501225_0045753_71_1072 | 330 |
| 185 | 3300053727 | Ga0500611_000077 | Ga0500611_000077_24975_25994 | 330 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4ign-assembly2.cif.gz_B | 2.32 angstrom x-ray crystal structure of r47a mutant of human acmsd | 0.9881 | 1 | 329 |
| 4ign-assembly2.cif.gz_B | 2.32 angstrom x-ray crystal structure of r47a mutant of human acmsd | 0.9852 | 1 | 329 |
| 4ofc-assembly1.cif.gz_A | 2.0 angstroms x-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase | 0.9839 | 1 | 328 |
| 4ofc-assembly1.cif.gz_A | 2.0 angstroms x-ray crystal structure of human 2-amino-3-carboxymuconate-6-semialdehye decarboxylase | 0.978 | 1 | 328 |
| 7pwy-assembly2.cif.gz_C | structure of human dimeric acmsd in complex with the inhibitor tes-1025 | 0.9771 | 2 | 328 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4ofcD00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9856 | 1 | 328 | 3.20.20.140 |
| 4ofcD00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9797 | 1 | 328 | 3.20.20.140 |
| 4eraA00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9615 | 2 | 326 | 3.20.20.140 |
| 4eraA00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9473 | 2 | 326 | 3.20.20.140 |
| 4lalD00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.8595 | 1 | 328 | 3.20.20.140 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3USS2-F1-model_v4 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) | 0.9968 | 1 | 227 |
GO:0005829
GO:0016787 GO:0016831 GO:0019748 |
| AF-A0A1S9CVB0-F1-model_v4 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) | 0.9963 | 66 | 328 |
GO:0005829
GO:0016787 GO:0016831 GO:0019748 |
| AF-A0A1E4L9U1-F1-model_v4 | deleted | 0.9938 | 53 | 328 |
|
| AF-A0A3M1A0R6-F1-model_v4 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) | 0.9935 | 93 | 329 |
GO:0005829
GO:0016020 GO:0016787 GO:0016831 GO:0019748 |
| AF-A0A522R520-F1-model_v4 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45) (Picolinate carboxylase) | 0.9932 | 110 | 328 |
GO:0005829
GO:0016787 GO:0016831 GO:0019748 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar