F284697

General Info

Members Datasets Scaffolds Average Seq Length
185 154 370 139

Family's Representative Sequence

Representative Sequence 3300038741|Ga0400488_12524|Ga0400488_12524_2468_2980
Length 170
Sequence MTHAVARPDPDSSSTERTRASMLFVCIHNAGRSQMAAGWLTALAGDAIEVRSAGTTPADRVNPVAVAAMAEVGIDITASAPKVLTGDAVEASDVVITMGCGDTCPYYPGTRYLDWALDDPAGLDIEAVRPIRDAIRAKVEQLITELLPAGPGVTTPGHERDLTHPPKGPT

Samples

Sample ID Description Type Environment
1 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
36 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
52 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
53 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
61 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
69 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
73 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
74 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
75 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
76 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
77 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
78 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
79 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
87 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
88 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
119 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
136 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
138 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
139 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
140 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
143 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
144 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
145 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
146 2858882152 Micromonospora noduli MED15 Isolate Nodule
147 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
148 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
149 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
150 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
151 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
152 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
153 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
154 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.97
Metatranscriptomes 0
Isolates 7.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.03
Nodule 1.08
Rhizoplane 6.49
Rhizosphere 72.97
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400488_12524 3300038741 Bacteria 4845
2 JGI24739J22299_10042959 3300001989 Bacteria 1497
3 JGI25407J50210_10025375 3300003373 Bacteria 1537
4 Ga0070658_11065839 3300005327 Bacteria 703
5 Ga0070682_101218598 3300005337 Bacteria 636
6 Ga0070660_100855448 3300005339 Bacteria 766
7 Ga0070674_100116445 3300005356 Bacteria 1971
8 Ga0070667_101290424 3300005367 Bacteria 684
9 Ga0070700_100000184 3300005441 Bacteria 35554
10 Ga0070679_100617834 3300005530 Bacteria 1027
11 Ga0070684_100019846 3300005535 Bacteria 5569
12 Ga0070684_101878085 3300005535 Bacteria 565
13 Ga0068855_100923372 3300005563 Bacteria 921
14 Ga0070664_100142390 3300005564 Bacteria 2112
15 Ga0068857_101048748 3300005577 Bacteria 786
16 Ga0068864_100209815 3300005618 Bacteria 1793
17 Ga0068864_100933915 3300005618 Bacteria 858
18 Ga0068863_100003607 3300005841 Bacteria 15285
19 Ga0068858_100499851 3300005842 Bacteria 1175
20 Ga0081455_10172944 3300005937 Bacteria 1643
21 Ga0081538_10001826 3300005981 Bacteria 21447
22 Ga0081539_10003765 3300005985 Bacteria 17969
23 Ga0081539_10008348 3300005985 Bacteria 9050
24 Ga0075363_100000353 3300006048 Bacteria 13772
25 Ga0075364_10004117 3300006051 Bacteria 8347
26 Ga0075364_10086053 3300006051 Bacteria 2082
27 Ga0075364_10110209 3300006051 Bacteria 1836
28 Ga0075364_10160140 3300006051 Bacteria 1519
29 Ga0075367_10375833 3300006178 Bacteria 898
30 Ga0075367_10576309 3300006178 Bacteria 715
31 Ga0075369_10061200 3300006186 Bacteria 1643
32 Ga0075370_10004135 3300006353 Bacteria 6992
33 Ga0075428_100000132 3300006844 Bacteria 65638
34 Ga0075428_102290811 3300006844 Bacteria 556
35 Ga0075431_100351764 3300006847 Bacteria 1481
36 Ga0105245_10593116 3300009098 Bacteria 1134
37 Ga0114129_10413639 3300009147 Bacteria 1775
38 Ga0114129_10861142 3300009147 Bacteria 1151
39 Ga0105243_10151804 3300009148 Bacteria 1988
40 Ga0157326_1022955 3300012513 Bacteria 782
41 Ga0157371_10786382 3300013102 Bacteria 716
42 Ga0157375_10965218 3300013308 Bacteria 993
43 Ga0163163_10018677 3300014325 Bacteria 6495
44 Ga0163163_12149891 3300014325 Bacteria 617
45 Ga0183367_1004 3300015688 Bacteria 716880
46 Ga0207656_10374477 3300025321 Bacteria 713
47 Ga0207710_10695530 3300025900 Bacteria 533
48 Ga0207694_10894031 3300025924 Bacteria 751
49 Ga0207669_10077643 3300025937 Bacteria 2113
50 Ga0207679_11570629 3300025945 Bacteria 603
51 Ga0207708_10000023 3300026075 Bacteria 176615
52 Ga0207702_11080820 3300026078 Bacteria 796
53 Ga0207641_10008874 3300026088 Bacteria 8302
54 Ga0207676_10073952 3300026095 Bacteria 2744
55 Ga0207674_11896487 3300026116 Bacteria 562
56 Ga0207683_10772374 3300026121 Bacteria 892
57 Ga0207428_10613203 3300027907 Bacteria 783
58 Ga0268266_10029293 3300028379 Bacteria 4681
59 Ga0268266_10168633 3300028379 Bacteria 1986
60 Ga0265334_10022015 3300028573 Bacteria 2601
61 Ga0265338_10000073 3300028800 Bacteria 181521
62 Ga0307512_10222965 3300030522 Bacteria 982
63 Ga0265325_10001520 3300031241 Bacteria 16268
64 Ga0265329_10071353 3300031242 Bacteria 1099
65 Ga0265339_10002717 3300031249 Bacteria 12579
66 Ga0265327_10014010 3300031251 Bacteria 5280
67 Ga0265327_10026715 3300031251 Bacteria 3338
68 Ga0265327_10181858 3300031251 Bacteria 961
69 Ga0265316_10074614 3300031344 Bacteria 2610
70 Ga0307513_11004891 3300031456 Bacteria 544
71 Ga0307408_101097100 3300031548 Bacteria 738
72 Ga0265313_10002648 3300031595 Bacteria 15218
73 Ga0307508_10101041 3300031616 Bacteria 2479
74 Ga0307508_10329356 3300031616 Bacteria 1119
75 Ga0316579_10007073 3300031691 Bacteria 4615
76 Ga0265314_10021551 3300031711 Bacteria 4950
77 Ga0307405_11957505 3300031731 Bacteria 524
78 Ga0307413_10998374 3300031824 Bacteria 717
79 Ga0307406_11658266 3300031901 Bacteria 566
80 Ga0307416_100300996 3300032002 Bacteria 1594
81 Ga0307416_102193934 3300032002 Bacteria 654
82 Ga0307415_100022681 3300032126 Bacteria 3880
83 Ga0307415_100285079 3300032126 Bacteria 1360
84 Ga0307415_100873722 3300032126 Bacteria 827
85 Ga0307507_10000009 3300033179 Bacteria 265992
86 Ga0373951_0000059 3300035091 Bacteria 44233
87 Ga0373925_0070194 3300037068 Bacteria 2647
88 Ga0373925_0311400 3300037068 Bacteria 1273
89 Ga0395901_0374891 3300038443 Bacteria 1465
90 Ga0451789_0254879 3300041443 Bacteria 515
91 Ga0451797_0618723 3300041453 Bacteria 1585
92 Ga0451802_0121907 3300041460 Bacteria 649
93 Ga0451837_1441715 3300041494 Bacteria 2871
94 Ga0451839_0261640 3300041496 Bacteria 1063
95 Ga0451843_0333549 3300041509 Bacteria 589
96 Ga0451843_0750479 3300041509 Bacteria 2776
97 Ga0451853_1569820 3300041512 Bacteria 583
98 Ga0439440_0014288 3300042993 Bacteria 1712
99 Ga0466970_0420469 3300044765 Bacteria 764
100 Ga0466960_0825618 3300044901 Bacteria 562
101 Ga0495592_0341044 3300046454 Bacteria 963
102 Ga0495641_0183920 3300046461 Bacteria 936
103 Ga0495641_0447727 3300046461 Bacteria 588
104 Ga0495651_0089998 3300046462 Bacteria 2302
105 Ga0495664_0262814 3300046477 Bacteria 1043
106 Ga0495608_0025731 3300046511 Bacteria 4018
107 Ga0495618_0095078 3300046514 Bacteria 1905
108 Ga0495620_0072319 3300046515 Bacteria 1408
109 Ga0495628_0011300 3300046516 Bacteria 7553
110 Ga0495628_0340732 3300046516 Bacteria 1103
111 Ga0495630_0047996 3300046517 Bacteria 3195
112 Ga0495652_0071467 3300046529 Bacteria 2896
113 Ga0495640_0025705 3300046533 Bacteria 4266
114 Ga0495645_0129138 3300046543 Bacteria 1773
115 Ga0495645_0161339 3300046543 Bacteria 1550
116 Ga0495667_0062683 3300046559 Bacteria 2436
117 Ga0495656_0066331 3300046615 Bacteria 1590
118 Ga0495634_0041676 3300046642 Bacteria 3118
119 Ga0495634_0441260 3300046642 Bacteria 769
120 Ga0495635_0001042 3300046663 Bacteria 18379
121 Ga0495599_0160236 3300046678 Bacteria 1391
122 Ga0495623_0294371 3300046679 Bacteria 899
123 Ga0495646_0042384 3300046680 Bacteria 2793
124 Ga0495646_0437558 3300046680 Bacteria 676
125 Ga0495647_0158723 3300046681 Bacteria 973
126 Ga0495613_0211201 3300046689 Bacteria 1365
127 Ga0495671_0575739 3300046692 Bacteria 536
128 Ga0495600_0012658 3300046809 Bacteria 5280
129 Ga0495600_0604761 3300046809 Bacteria 666
130 Ga0495581_0027998 3300047315 Bacteria 3267
131 Ga0495683_0280075 3300047323 Bacteria 722
132 Ga0495675_0032328 3300047444 Bacteria 3339
133 Ga0495684_0242015 3300047471 Bacteria 1316
134 Ga0495602_0110001 3300048088 Bacteria 2241
135 Ga0496101_0088996 3300048904 Bacteria 2294
136 Ga0496102_0023954 3300048905 Bacteria 5426
137 Ga0496103_0246103 3300048906 Bacteria 1150
138 Ga0496104_0055725 3300048907 Bacteria 3738
139 Ga0496108_0480981 3300048911 Bacteria 1085
140 Ga0496109_0459110 3300048912 Bacteria 1203
141 Ga0496109_0764464 3300048912 Bacteria 904
142 Ga0496110_0877736 3300048913 Bacteria 803
143 Ga0496111_0728327 3300048914 Bacteria 720
144 Ga0496117_0093743 3300048920 Bacteria 1925
145 Ga0496118_0003661 3300048921 Bacteria 19087
146 Ga0496124_0185039 3300048927 Bacteria 1599
147 Ga0496126_0627070 3300048929 Bacteria 844
148 Ga0501033_0411499 3300049570 Bacteria 942
149 Ga0501036_0790802 3300049572 Bacteria 781
150 Ga0501039_0398617 3300049575 Bacteria 1081
151 Ga0501070_0927755 3300049586 Unclassified 678
152 Ga0501072_0094177 3300049588 Bacteria 2379
153 Ga0501076_0372240 3300049592 Bacteria 1174
154 Ga0501083_0369488 3300049744 Bacteria 933
155 nmdc:mga00v17_723533_c1 3300050491 Bacteria 637
156 nmdc:mga05p37_1440962_c1 3300050507 Bacteria 690
157 nmdc:mga05p37_429092_c1 3300050507 Bacteria 1536
158 nmdc:mga09592_384968_c1 3300050508 Bacteria 1213
159 nmdc:mga06r32_465329_c1 3300050510 Bacteria 1243
160 nmdc:mga08y16_506991_c1 3300050511 Bacteria 1225
161 Ga0495601_0000499 3300053077 Bacteria 20572
162 Ga0495601_0011136 3300053077 Bacteria 5372
163 Ga0495601_0154860 3300053077 Bacteria 1496
164 Ga0495612_0030646 3300053078 Bacteria 2166
165 Ga0495612_0062011 3300053078 Bacteria 1549
166 Ga0495595_0163609 3300053084 Bacteria 1099
167 Ga0495619_0398080 3300053085 Bacteria 951
168 Ga0495619_0609740 3300053085 Bacteria 746
169 Ga0500644_0016165 3300053088 Bacteria 2145
170 Ga0500569_129545 3300053109 Bacteria 844
171 Ga0500559_0005614 3300053136 Bacteria 5747
172 Ga0501082_0717093 3300060353 Bacteria 875
173 2738705653 2738541274 Bacteria 6909446
174 2739332470 2738543028 Bacteria 6917070
175 2816509045 2816332139 Bacteria 9138787
176 2839987387 2839986021 Bacteria 3685650
177 2858887727 2858882152 Bacteria 7230291
178 2869065909 2869061728 Bacteria 7112407
179 2869069052 2869068681 Bacteria 7205615
180 2884996716 2884994152 Bacteria 4492978
181 2908811788 2908811453 Bacteria 5478616
182 2919448203 2919446982 Bacteria 3994487
183 2929229064 2929226422 Bacteria 7248583
184 8054727801 8054727385 Bacteria 7558670
185 8056208192 8056207758 Bacteria 8639239
186 Ga0400488_12524
187 JGI24739J22299_10042959
188 JGI25407J50210_10025375
189 Ga0070658_11065839
190 Ga0070682_101218598
191 Ga0070660_100855448
192 Ga0070674_100116445
193 Ga0070667_101290424
194 Ga0070700_100000184
195 Ga0070679_100617834
196 Ga0070684_100019846
197 Ga0070684_101878085
198 Ga0068855_100923372
199 Ga0070664_100142390
200 Ga0068857_101048748
201 Ga0068864_100209815
202 Ga0068864_100933915
203 Ga0068863_100003607
204 Ga0068858_100499851
205 Ga0081455_10172944
206 Ga0081538_10001826
207 Ga0081539_10003765
208 Ga0081539_10008348
209 Ga0075363_100000353
210 Ga0075364_10004117
211 Ga0075364_10086053
212 Ga0075364_10110209
213 Ga0075364_10160140
214 Ga0075367_10375833
215 Ga0075367_10576309
216 Ga0075369_10061200
217 Ga0075370_10004135
218 Ga0075428_100000132
219 Ga0075428_102290811
220 Ga0075431_100351764
221 Ga0105245_10593116
222 Ga0114129_10413639
223 Ga0114129_10861142
224 Ga0105243_10151804
225 Ga0157326_1022955
226 Ga0157371_10786382
227 Ga0157375_10965218
228 Ga0163163_10018677
229 Ga0163163_12149891
230 Ga0183367_1004
231 Ga0207656_10374477
232 Ga0207710_10695530
233 Ga0207694_10894031
234 Ga0207669_10077643
235 Ga0207679_11570629
236 Ga0207708_10000023
237 Ga0207702_11080820
238 Ga0207641_10008874
239 Ga0207676_10073952
240 Ga0207674_11896487
241 Ga0207683_10772374
242 Ga0207428_10613203
243 Ga0268266_10029293
244 Ga0268266_10168633
245 Ga0265334_10022015
246 Ga0265338_10000073
247 Ga0307512_10222965
248 Ga0265325_10001520
249 Ga0265329_10071353
250 Ga0265339_10002717
251 Ga0265327_10014010
252 Ga0265327_10026715
253 Ga0265327_10181858
254 Ga0265316_10074614
255 Ga0307513_11004891
256 Ga0307408_101097100
257 Ga0265313_10002648
258 Ga0307508_10101041
259 Ga0307508_10329356
260 Ga0316579_10007073
261 Ga0265314_10021551
262 Ga0307405_11957505
263 Ga0307413_10998374
264 Ga0307406_11658266
265 Ga0307416_100300996
266 Ga0307416_102193934
267 Ga0307415_100022681
268 Ga0307415_100285079
269 Ga0307415_100873722
270 Ga0307507_10000009
271 Ga0373951_0000059
272 Ga0373925_0070194
273 Ga0373925_0311400
274 Ga0395901_0374891
275 Ga0451789_0254879
276 Ga0451797_0618723
277 Ga0451802_0121907
278 Ga0451837_1441715
279 Ga0451839_0261640
280 Ga0451843_0333549
281 Ga0451843_0750479
282 Ga0451853_1569820
283 Ga0439440_0014288
284 Ga0466970_0420469
285 Ga0466960_0825618
286 Ga0495592_0341044
287 Ga0495641_0183920
288 Ga0495641_0447727
289 Ga0495651_0089998
290 Ga0495664_0262814
291 Ga0495608_0025731
292 Ga0495618_0095078
293 Ga0495620_0072319
294 Ga0495628_0011300
295 Ga0495628_0340732
296 Ga0495630_0047996
297 Ga0495652_0071467
298 Ga0495640_0025705
299 Ga0495645_0129138
300 Ga0495645_0161339
301 Ga0495667_0062683
302 Ga0495656_0066331
303 Ga0495634_0041676
304 Ga0495634_0441260
305 Ga0495635_0001042
306 Ga0495599_0160236
307 Ga0495623_0294371
308 Ga0495646_0042384
309 Ga0495646_0437558
310 Ga0495647_0158723
311 Ga0495613_0211201
312 Ga0495671_0575739
313 Ga0495600_0012658
314 Ga0495600_0604761
315 Ga0495581_0027998
316 Ga0495683_0280075
317 Ga0495675_0032328
318 Ga0495684_0242015
319 Ga0495602_0110001
320 Ga0496101_0088996
321 Ga0496102_0023954
322 Ga0496103_0246103
323 Ga0496104_0055725
324 Ga0496108_0480981
325 Ga0496109_0459110
326 Ga0496109_0764464
327 Ga0496110_0877736
328 Ga0496111_0728327
329 Ga0496117_0093743
330 Ga0496118_0003661
331 Ga0496124_0185039
332 Ga0496126_0627070
333 Ga0501033_0411499
334 Ga0501036_0790802
335 Ga0501039_0398617
336 Ga0501070_0927755
337 Ga0501072_0094177
338 Ga0501076_0372240
339 Ga0501083_0369488
340 nmdc:mga00v17_723533_c1
341 nmdc:mga05p37_1440962_c1
342 nmdc:mga05p37_429092_c1
343 nmdc:mga09592_384968_c1
344 nmdc:mga06r32_465329_c1
345 nmdc:mga08y16_506991_c1
346 Ga0495601_0000499
347 Ga0495601_0011136
348 Ga0495601_0154860
349 Ga0495612_0030646
350 Ga0495612_0062011
351 Ga0495595_0163609
352 Ga0495619_0398080
353 Ga0495619_0609740
354 Ga0500644_0016165
355 Ga0500569_129545
356 Ga0500559_0005614
357 Ga0501082_0717093
358 2738705653
359 2739332470
360 2816509045
361 2839987387
362 2858887727
363 2869065909
364 2869069052
365 2884996716
366 2908811788
367 2919448203
368 2929229064
369 8054727801
370 8056208192

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01451

LMWPc

Low molecular weight phosphotyrosine protein phosphatase

22

143

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3t38-assembly1.cif.gz_B corynebacterium glutamicum thioredoxin-dependent arsenate reductase cg_arsc1' 0.963 6 133
2fxi-assembly1.cif.gz_A arsenate reductase (arsc from pi258) c10s/c15a double mutant with sulfate in its active site 0.9288 4 128
3t38-assembly1.cif.gz_A corynebacterium glutamicum thioredoxin-dependent arsenate reductase cg_arsc1' 0.9258 1 133
1rxi-assembly1.cif.gz_A pi258 arsenate reductase (arsc) triple mutant c10s/c15a/c82s 0.9256 4 128
2cd7-assembly1.cif.gz_A staphylococcus aureus pi258 arsenate reductase (arsc) h62q mutant 0.9202 4 128
ID Description Score Start End Superfamily
af_I6X4W4_364_495_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.995 6 132 3.40.50.2300
3t38B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9612 4 133 3.40.50.2300
af_I6X4W4_364_495_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9503 6 132 3.40.50.2300
3t38B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9301 4 133 3.40.50.2300
3rh0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8947 6 129 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A543I3R4-F1-model_v4 Arsenite efflux ATP-binding protein ArsA 1.003 4 137 GO:0005524
GO:0015446
GO:0016887
AF-A0A1Q2CHL1-F1-model_v4 Protein tyrosine phosphatase 1.002 4 137
AF-A0A7C6MCV9-F1-model_v4 Low molecular weight phosphatase family protein 1.002 5 137 GO:0046685
AF-A0A5Q2FHT0-F1-model_v4 Phosphotyrosine protein phosphatase 1.002 10 137 GO:0046685
AF-A0A852VRL7-F1-model_v4 Protein-tyrosine-phosphatase 1.001 6 132 GO:0046685

Map