F284415

General Info

Members Datasets Scaffolds Average Seq Length
185 103 370 377

Family's Representative Sequence

Representative Sequence 3300025904|Ga0207647_10056524|Ga0207647_100565242
Length 413
Sequence MGASGFHRTSRARWWSTSGPTCARGAQRALAAGRDVNLALKDISHNLGRVLLTCLGLSLLLGIVLAMVGIYRGLILESLGLVRAAGAQVWVVEGDTRGPFAEASRIPGDTHTTVAVQWGVAAAGGVSYQNVEAQHHGRTLRLLVVGAQIGRPGEAPYVIEGRPILRSRYEAVADRGTGLALGEQIKLGRDTFTVVGLTRNLVASGGDPAIFITLRDAQKLQFDLTPAAARRESARSSGASGTIDTVNAVVVRLLPGVDAKQFAQDIARWKHLGALTQEDQETVLSRSVIDRARRQIGLFTTLLLTVSTVIIGLIIYTMTIDKKKSIATLKLIGAPDRRIVGLIVQQALAMGVISFLAGALLINAGADYFPRRVVLELADAAMLFGVVLLVCLLASALGVRTALKIDPASALAG

Samples

Sample ID Description Type Environment
1 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
18 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
25 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
26 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
27 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
28 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
29 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
30 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
31 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
32 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
33 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
34 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
35 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
36 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
37 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
38 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
39 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
40 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
41 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
49 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
50 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
51 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
52 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
53 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
54 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
59 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
60 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
92 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
100 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
101 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
102 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
103 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.38
Metatranscriptomes 0
Isolates 1.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.16
Nodule 0
Rhizoplane 0
Rhizosphere 96.22
Stem 0
Stem Tuber 0
Unclassified 1.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207647_10056524 3300025904 Bacteria 2407
2 Ga0070669_100025269 3300005353 Bacteria 4266
3 Ga0070675_100069070 3300005354 Bacteria 2926
4 Ga0070713_100025999 3300005436 Bacteria 4588
5 Ga0070663_100112067 3300005455 Bacteria 2051
6 Ga0070678_100286801 3300005456 Bacteria 1394
7 Ga0070704_100046100 3300005549 Bacteria 3037
8 Ga0068855_100279293 3300005563 Bacteria 1855
9 Ga0068862_100179185 3300005844 Unclassified 1901
10 Ga0075364_10089789 3300006051 Bacteria 2038
11 Ga0070712_100081097 3300006175 Bacteria 2350
12 Ga0075367_10028377 3300006178 Bacteria 3192
13 Ga0075428_100037800 3300006844 Bacteria 5312
14 Ga0075428_100187448 3300006844 Bacteria 2238
15 Ga0075430_100047064 3300006846 Bacteria 3642
16 Ga0075431_100068160 3300006847 Bacteria 3672
17 Ga0075431_100109129 3300006847 Bacteria 2856
18 Ga0075431_100219047 3300006847 Bacteria 1942
19 Ga0114129_10010138 3300009147 Bacteria 13431
20 Ga0114129_10163233 3300009147 Bacteria 3042
21 Ga0157380_10088989 3300014326 Plasmid 2542
22 Ga0207693_10218407 3300025915 Bacteria 1498
23 Ga0207681_10226304 3300025923 Bacteria 1450
24 Ga0207659_10103928 3300025926 Bacteria 2148
25 Ga0207700_10019350 3300025928 Bacteria 4597
26 Ga0207691_10399775 3300025940 Bacteria 1172
27 Ga0207712_10044722 3300025961 Bacteria 3062
28 Ga0265320_10007732 3300031240 Bacteria 6644
29 Ga0307408_100239374 3300031548 Bacteria 1491
30 Ga0316579_10019502 3300031691 Bacteria 2997
31 Ga0265314_10007089 3300031711 Bacteria 9779
32 Ga0316578_10038593 3300031728 Bacteria 2755
33 Ga0307416_100094297 3300032002 Bacteria 2581
34 Ga0316583_10004728 3300032133 Bacteria 4861
35 Ga0373944_0007319 3300035089 Bacteria 2954
36 Ga0373932_0054414 3300035112 Bacteria 1198
37 Ga0373936_0002515 3300035113 Bacteria 6871
38 Ga0373956_0085543 3300035119 Bacteria 1450
39 Ga0373957_0081941 3300035120 Bacteria 1275
40 Ga0373943_0001378 3300035170 Bacteria 10950
41 Ga0373946_0003959 3300035171 Bacteria 5269
42 Ga0373942_0002139 3300035207 Bacteria 4887
43 Ga0373927_0007446 3300035695 Bacteria 7407
44 Ga0373933_0021953 3300035724 Bacteria 3631
45 Ga0373947_0002318 3300035725 Bacteria 11504
46 Ga0373937_0000561 3300036401 Bacteria 32927
47 Ga0373925_0002131 3300037068 Bacteria 16182
48 Ga0395899_0000059 3300037312 Bacteria 213004
49 Ga0395900_0000017 3300037418 Bacteria 369602
50 Ga0395898_0000030 3300037466 Bacteria 369577
51 Ga0395905_0000056 3300037471 Bacteria 209230
52 Ga0395905_0016799 3300037471 Bacteria 6953
53 Ga0316581_0002641 3300037588 Bacteria 4331
54 Ga0395901_0000015 3300038443 Bacteria 373388
55 Ga0395901_0027543 3300038443 Bacteria 5840
56 Ga0439453_0000265 3300041408 Bacteria 5330
57 Ga0439441_003332 3300042001 Bacteria 2362
58 Ga0439446_0017542 3300042156 Bacteria 2002
59 Ga0451577_0011878 3300042876 Bacteria 8212
60 Ga0451577_0211239 3300042876 Bacteria 1753
61 Ga0453683_0001398 3300044673 Bacteria 20963
62 Ga0453684_0006821 3300044712 Bacteria 21477
63 Ga0453684_0328485 3300044712 Bacteria 1730
64 Ga0451576_0000301 3300045051 Bacteria 119546
65 Ga0451576_0018504 3300045051 Bacteria 7634
66 Ga0495638_0005981 3300046460 Bacteria 8927
67 Ga0495608_0009521 3300046511 Bacteria 6786
68 Ga0495675_0213864 3300047444 Unclassified 1169
69 Ga0501031_0012857 3300049568 Bacteria 5469
70 Ga0501031_0084099 3300049568 Bacteria 2074
71 Ga0501032_0022877 3300049569 Bacteria 4328
72 Ga0501032_0026339 3300049569 Bacteria 4001
73 Ga0501032_0109129 3300049569 Bacteria 1832
74 Ga0501033_0004194 3300049570 Bacteria 11601
75 Ga0501033_0007256 3300049570 Bacteria 8646
76 Ga0501033_0115116 3300049570 Bacteria 1954
77 Ga0501033_0115855 3300049570 Bacteria 1947
78 Ga0501034_0002893 3300049571 Bacteria 19964
79 Ga0501034_0334657 3300049571 Bacteria 1445
80 Ga0501036_0000096 3300049572 Bacteria 54442
81 Ga0501036_0036362 3300049572 Bacteria 4168
82 Ga0501036_0064633 3300049572 Bacteria 3097
83 Ga0501036_0148831 3300049572 Bacteria 1975
84 Ga0501037_0027097 3300049573 Bacteria 4233
85 Ga0501037_0040685 3300049573 Bacteria 3419
86 Ga0501038_0000791 3300049574 Bacteria 28037
87 Ga0501038_0087922 3300049574 Bacteria 2609
88 Ga0501039_0009039 3300049575 Bacteria 7591
89 Ga0501040_0000395 3300049576 Bacteria 25703
90 Ga0501040_0042762 3300049576 Bacteria 3087
91 Ga0501040_0049054 3300049576 Bacteria 2886
92 Ga0501040_0113269 3300049576 Bacteria 1898
93 Ga0501041_0000652 3300049577 Bacteria 18234
94 Ga0501042_0003504 3300049578 Bacteria 9859
95 Ga0501042_0115357 3300049578 Bacteria 1934
96 Ga0501042_0277185 3300049578 Bacteria 1211
97 Ga0501043_0004325 3300049579 Bacteria 11565
98 Ga0501043_0021488 3300049579 Bacteria 5061
99 Ga0501046_0000200 3300049580 Bacteria 61991
100 Ga0501046_0019991 3300049580 Bacteria 5544
101 Ga0501046_0033030 3300049580 Bacteria 4186
102 Ga0501047_0011119 3300049581 Bacteria 8518
103 Ga0501047_0044066 3300049581 Bacteria 4309
104 Ga0501048_0000901 3300049582 Bacteria 21906
105 Ga0501067_0020675 3300049583 Plasmid 3642
106 Ga0501070_0002315 3300049586 Bacteria 16715
107 Ga0501070_0004245 3300049586 Bacteria 12320
108 Ga0501071_0001668 3300049587 Bacteria 13020
109 Ga0501071_0178162 3300049587 Bacteria 1592
110 Ga0501072_0024271 3300049588 Bacteria 4715
111 Ga0501072_0091438 3300049588 Bacteria 2416
112 Ga0501072_0135956 3300049588 Bacteria 1960
113 Ga0501072_0228538 3300049588 Bacteria 1482
114 Ga0501073_0003596 3300049589 Bacteria 11653
115 Ga0501074_0003984 3300049590 Bacteria 10526
116 Ga0501074_0005833 3300049590 Bacteria 8882
117 Ga0501074_0141560 3300049590 Bacteria 1720
118 Ga0501074_0161253 3300049590 Bacteria 1602
119 Ga0501075_0000232 3300049591 Bacteria 29854
120 Ga0501075_0015894 3300049591 Bacteria 5412
121 Ga0501075_0036208 3300049591 Bacteria 3683
122 Ga0501075_0050869 3300049591 Bacteria 3115
123 Ga0501075_0158884 3300049591 Bacteria 1724
124 Ga0501075_0299133 3300049591 Bacteria 1226
125 Ga0501076_0004694 3300049592 Bacteria 9744
126 Ga0501076_0008866 3300049592 Bacteria 7397
127 Ga0501076_0012831 3300049592 Bacteria 6271
128 Ga0501076_0022043 3300049592 Bacteria 4892
129 Ga0501076_0084209 3300049592 Bacteria 2554
130 Ga0501076_0098611 3300049592 Bacteria 2354
131 Ga0501077_0000291 3300049593 Bacteria 29728
132 Ga0501077_0011636 3300049593 Bacteria 5499
133 Ga0501077_0045094 3300049593 Bacteria 2800
134 Ga0501077_0094619 3300049593 Bacteria 1894
135 Ga0501077_0149596 3300049593 Bacteria 1482
136 Ga0501079_0004756 3300049741 Bacteria 10059
137 Ga0501079_0005192 3300049741 Bacteria 9680
138 Ga0501079_0008680 3300049741 Bacteria 7706
139 Ga0501079_0047411 3300049741 Bacteria 3315
140 Ga0501079_0057185 3300049741 Bacteria 3010
141 Ga0501079_0118750 3300049741 Bacteria 2056
142 Ga0501079_0217372 3300049741 Bacteria 1493
143 Ga0501080_0003289 3300049742 Bacteria 14283
144 Ga0501080_0018898 3300049742 Bacteria 6382
145 Ga0501080_0021105 3300049742 Bacteria 6029
146 Ga0501081_0002360 3300049743 Bacteria 11890
147 Ga0501081_0018309 3300049743 Bacteria 4649
148 Ga0501081_0021035 3300049743 Bacteria 4354
149 Ga0501081_0049735 3300049743 Bacteria 2887
150 Ga0501081_0098903 3300049743 Bacteria 2060
151 Ga0501083_0062589 3300049744 Bacteria 2482
152 Ga0501035_0005941 3300049822 Bacteria 11494
153 Ga0501035_0010706 3300049822 Bacteria 8491
154 Ga0501044_0003870 3300049823 Bacteria 16772
155 Ga0501045_0000087 3300049824 Bacteria 43859
156 Ga0501045_0028738 3300049824 Bacteria 4012
157 Ga0501045_0036748 3300049824 Bacteria 3558
158 Ga0501045_0047904 3300049824 Bacteria 3114
159 nmdc:mga00v17_105938_c1 3300050491 Bacteria 1779
160 nmdc:mga06z11_121960_c1 3300050494 Bacteria 1455
161 nmdc:mga05p37_307283_c1 3300050507 Bacteria 1881
162 nmdc:mga05p37_35627_c1 3300050507 Bacteria 6103
163 nmdc:mga05p37_38948_c1 3300050507 Bacteria 5832
164 nmdc:mga05p37_424394_c1 3300050507 Bacteria 1546
165 nmdc:mga09592_67180_c1 3300050508 Bacteria 3040
166 nmdc:mga0qj67_283934_c1 3300050509 Bacteria 1341
167 nmdc:mga0qj67_67984_c1 3300050509 Bacteria 2839
168 nmdc:mga06r32_153735_c1 3300050510 Bacteria 2280
169 nmdc:mga06r32_169863_c2 3300050510 Bacteria 1714
170 nmdc:mga06r32_239636_c1 3300050510 Bacteria 1801
171 nmdc:mga06r32_95647_c1 3300050510 Bacteria 2907
172 Ga0495595_0028387 3300053084 Bacteria 2499
173 Ga0501084_0004143 3300054114 Bacteria 11816
174 Ga0501084_0045365 3300054114 Bacteria 3680
175 Ga0501084_0100472 3300054114 Bacteria 2429
176 Ga0501082_0000867 3300060353 Bacteria 26750
177 Ga0501082_0001715 3300060353 Bacteria 19335
178 Ga0501082_0060806 3300060353 Bacteria 3252
179 Ga0501082_0140025 3300060353 Bacteria 2100
180 Ga0530510_0000172 3300061734 Bacteria 39473
181 Ga0530510_0001735 3300061734 Bacteria 14835
182 Ga0530510_0059673 3300061734 Bacteria 2760
183 2643983965 2643221595 Bacteria 6565519
184 2644156095 2643221627 Bacteria 6761570
185 2889038852 2889033259 Bacteria 9099371
186 Ga0207647_10056524
187 Ga0070669_100025269
188 Ga0070675_100069070
189 Ga0070713_100025999
190 Ga0070663_100112067
191 Ga0070678_100286801
192 Ga0070704_100046100
193 Ga0068855_100279293
194 Ga0068862_100179185
195 Ga0075364_10089789
196 Ga0070712_100081097
197 Ga0075367_10028377
198 Ga0075428_100037800
199 Ga0075428_100187448
200 Ga0075430_100047064
201 Ga0075431_100068160
202 Ga0075431_100109129
203 Ga0075431_100219047
204 Ga0114129_10010138
205 Ga0114129_10163233
206 Ga0157380_10088989
207 Ga0207693_10218407
208 Ga0207681_10226304
209 Ga0207659_10103928
210 Ga0207700_10019350
211 Ga0207691_10399775
212 Ga0207712_10044722
213 Ga0265320_10007732
214 Ga0307408_100239374
215 Ga0316579_10019502
216 Ga0265314_10007089
217 Ga0316578_10038593
218 Ga0307416_100094297
219 Ga0316583_10004728
220 Ga0373944_0007319
221 Ga0373932_0054414
222 Ga0373936_0002515
223 Ga0373956_0085543
224 Ga0373957_0081941
225 Ga0373943_0001378
226 Ga0373946_0003959
227 Ga0373942_0002139
228 Ga0373927_0007446
229 Ga0373933_0021953
230 Ga0373947_0002318
231 Ga0373937_0000561
232 Ga0373925_0002131
233 Ga0395899_0000059
234 Ga0395900_0000017
235 Ga0395898_0000030
236 Ga0395905_0000056
237 Ga0395905_0016799
238 Ga0316581_0002641
239 Ga0395901_0000015
240 Ga0395901_0027543
241 Ga0439453_0000265
242 Ga0439441_003332
243 Ga0439446_0017542
244 Ga0451577_0011878
245 Ga0451577_0211239
246 Ga0453683_0001398
247 Ga0453684_0006821
248 Ga0453684_0328485
249 Ga0451576_0000301
250 Ga0451576_0018504
251 Ga0495638_0005981
252 Ga0495608_0009521
253 Ga0495675_0213864
254 Ga0501031_0012857
255 Ga0501031_0084099
256 Ga0501032_0022877
257 Ga0501032_0026339
258 Ga0501032_0109129
259 Ga0501033_0004194
260 Ga0501033_0007256
261 Ga0501033_0115116
262 Ga0501033_0115855
263 Ga0501034_0002893
264 Ga0501034_0334657
265 Ga0501036_0000096
266 Ga0501036_0036362
267 Ga0501036_0064633
268 Ga0501036_0148831
269 Ga0501037_0027097
270 Ga0501037_0040685
271 Ga0501038_0000791
272 Ga0501038_0087922
273 Ga0501039_0009039
274 Ga0501040_0000395
275 Ga0501040_0042762
276 Ga0501040_0049054
277 Ga0501040_0113269
278 Ga0501041_0000652
279 Ga0501042_0003504
280 Ga0501042_0115357
281 Ga0501042_0277185
282 Ga0501043_0004325
283 Ga0501043_0021488
284 Ga0501046_0000200
285 Ga0501046_0019991
286 Ga0501046_0033030
287 Ga0501047_0011119
288 Ga0501047_0044066
289 Ga0501048_0000901
290 Ga0501067_0020675
291 Ga0501070_0002315
292 Ga0501070_0004245
293 Ga0501071_0001668
294 Ga0501071_0178162
295 Ga0501072_0024271
296 Ga0501072_0091438
297 Ga0501072_0135956
298 Ga0501072_0228538
299 Ga0501073_0003596
300 Ga0501074_0003984
301 Ga0501074_0005833
302 Ga0501074_0141560
303 Ga0501074_0161253
304 Ga0501075_0000232
305 Ga0501075_0015894
306 Ga0501075_0036208
307 Ga0501075_0050869
308 Ga0501075_0158884
309 Ga0501075_0299133
310 Ga0501076_0004694
311 Ga0501076_0008866
312 Ga0501076_0012831
313 Ga0501076_0022043
314 Ga0501076_0084209
315 Ga0501076_0098611
316 Ga0501077_0000291
317 Ga0501077_0011636
318 Ga0501077_0045094
319 Ga0501077_0094619
320 Ga0501077_0149596
321 Ga0501079_0004756
322 Ga0501079_0005192
323 Ga0501079_0008680
324 Ga0501079_0047411
325 Ga0501079_0057185
326 Ga0501079_0118750
327 Ga0501079_0217372
328 Ga0501080_0003289
329 Ga0501080_0018898
330 Ga0501080_0021105
331 Ga0501081_0002360
332 Ga0501081_0018309
333 Ga0501081_0021035
334 Ga0501081_0049735
335 Ga0501081_0098903
336 Ga0501083_0062589
337 Ga0501035_0005941
338 Ga0501035_0010706
339 Ga0501044_0003870
340 Ga0501045_0000087
341 Ga0501045_0028738
342 Ga0501045_0036748
343 Ga0501045_0047904
344 nmdc:mga00v17_105938_c1
345 nmdc:mga06z11_121960_c1
346 nmdc:mga05p37_307283_c1
347 nmdc:mga05p37_35627_c1
348 nmdc:mga05p37_38948_c1
349 nmdc:mga05p37_424394_c1
350 nmdc:mga09592_67180_c1
351 nmdc:mga0qj67_283934_c1
352 nmdc:mga0qj67_67984_c1
353 nmdc:mga06r32_153735_c1
354 nmdc:mga06r32_169863_c2
355 nmdc:mga06r32_239636_c1
356 nmdc:mga06r32_95647_c1
357 Ga0495595_0028387
358 Ga0501084_0004143
359 Ga0501084_0045365
360 Ga0501084_0100472
361 Ga0501082_0000867
362 Ga0501082_0001715
363 Ga0501082_0060806
364 Ga0501082_0140025
365 Ga0530510_0000172
366 Ga0530510_0001735
367 Ga0530510_0059673
368 2643983965
369 2644156095
370 2889038852

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

297

407

0.98

PF12704

MacB_PCD

MacB-like periplasmic core domain

50

269

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.643 52 260
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.6369 52 260
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.6239 47 268
7ld5-assembly1.cif.gz_A polynucleotide phosphorylase 0.6021 88 114
5udf-assembly1.cif.gz_B structure of the n-terminal domain of lipoprotein-releasing system transmembrane protein lole from acinetobacter baumannii 0.6014 47 260
ID Description Score Start End Superfamily
af_K7KE01_9_82_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6717 230 260 3.30.70.100
af_Q92358_1_132_3.30.479.30 Alpha Beta;2-Layer Sandwich;Tetrahydropterin Synthase; Chain A;Band 7 domain 0.652 92 114 3.30.479.30
af_Q4DBP8_496_569_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.6315 231 259 3.30.70.870
af_A8JNU1_511_720_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.6311 288 364 1.10.287.70
af_X5LX76_569_671_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.6213 80 112 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A529JZC5-F1-model_v4 ABC transporter permease 0.8942 1 162 GO:0016020
AF-A0A529JZC5-F1-model_v4 ABC transporter permease 0.8839 1 162 GO:0016020
AF-A0A833GP49-F1-model_v4 ABC transporter permease 0.8788 2 266 GO:0016020
AF-A0A833GP49-F1-model_v4 ABC transporter permease 0.8608 2 266 GO:0016020
AF-A0A2T4J3U9-F1-model_v4 ABC transporter permease 0.8593 74 275

Map