F284118

General Info

Members Datasets Scaffolds Average Seq Length
185 128 370 255

Family's Representative Sequence

Representative Sequence 3300006048|Ga0075363_100277538|Ga0075363_1002775381
Length 286
Sequence MTTTDPATTIDLAPPDPSAPGRELTYDVPSGPIWLWRDSWTEALRHLRAVPRDPELLIFATIQPLMFVLLFTYVFGGEIEVPGFANYTQFVMPGIFAQTVLFGSTFTGLGIAEDLSKGMIERLRSLPMYQPAVLIGRTVSDLLRNVFTFLVMFLVATAIGFRIEGGVPAAIGATALLLLFGYAFSWIQAFIGLSVNSVEAANSAGFIWMFPLTFISSAFVDPSTMPSWLQPIAEANPFTKVTDATRALYNGMDPGNDVWISLAWAVGITAVFAFLSARTFTSAATR

Samples

Sample ID Description Type Environment
1 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
65 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
69 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
81 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
85 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
88 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
92 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
96 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
110 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
115 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.16
Nodule 0
Rhizoplane 1.62
Rhizosphere 88.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075363_100277538 3300006048 Bacteria 969
2 JGI25404J52841_10005512 3300003659 Bacteria 2614
3 Ga0070658_10164781 3300005327 Bacteria 1861
4 Ga0070676_10023814 3300005328 Bacteria 3444
5 Ga0068868_100119566 3300005338 Bacteria 2148
6 Ga0070674_100235379 3300005356 Bacteria 1431
7 Ga0070714_100451805 3300005435 Bacteria 1221
8 Ga0070714_100575437 3300005435 Bacteria 1080
9 Ga0070710_10006842 3300005437 Bacteria 5501
10 Ga0070705_100003781 3300005440 Bacteria 7404
11 Ga0070705_100033164 3300005440 Bacteria 2875
12 Ga0070700_100287535 3300005441 Bacteria 1195
13 Ga0070708_100009573 3300005445 Bacteria 7813
14 Ga0070663_100000286 3300005455 Bacteria 25737
15 Ga0070662_100145656 3300005457 Bacteria 1840
16 Ga0070681_10181522 3300005458 Bacteria 2026
17 Ga0068867_100175781 3300005459 Bacteria 1699
18 Ga0070698_100034771 3300005471 Bacteria 5214
19 Ga0070679_100003713 3300005530 Bacteria 13997
20 Ga0070684_100628695 3300005535 Bacteria 999
21 Ga0070696_100052275 3300005546 Bacteria 2843
22 Ga0068856_100061787 3300005614 Bacteria 3701
23 Ga0068866_10080642 3300005718 Bacteria 1746
24 Ga0068861_100003443 3300005719 Bacteria 10501
25 Ga0081455_10010295 3300005937 Bacteria 9506
26 Ga0081455_10140842 3300005937 Bacteria 1873
27 Ga0081538_10001087 3300005981 Bacteria 28940
28 Ga0081538_10010604 3300005981 Bacteria 7542
29 Ga0081538_10013570 3300005981 Bacteria 6442
30 Ga0081538_10028151 3300005981 Bacteria 3874
31 Ga0081539_10017104 3300005985 Bacteria 5116
32 Ga0075364_10061340 3300006051 Bacteria 2466
33 Ga0075362_10068548 3300006177 Bacteria 1616
34 Ga0075428_100053893 3300006844 Bacteria 4407
35 Ga0075428_100096971 3300006844 Bacteria 3214
36 Ga0075430_100002368 3300006846 Bacteria 15664
37 Ga0075430_100437462 3300006846 Bacteria 1079
38 Ga0075431_100000253 3300006847 Bacteria 40765
39 Ga0075431_100455000 3300006847 Bacteria 1275
40 Ga0075429_100010454 3300006880 Bacteria 8030
41 Ga0075429_100142962 3300006880 Bacteria 2094
42 Ga0111539_10435449 3300009094 Bacteria 1527
43 Ga0105245_10116938 3300009098 Bacteria 2487
44 Ga0114129_10105823 3300009147 Bacteria 3887
45 Ga0105238_10738167 3300009551 Bacteria 998
46 Ga0105249_10011411 3300009553 Bacteria 7803
47 Ga0105239_10178438 3300010375 Bacteria 2376
48 Ga0105239_10649332 3300010375 Bacteria 1205
49 Ga0157378_10239893 3300013297 Bacteria 1731
50 Ga0163162_10321277 3300013306 Bacteria 1680
51 Ga0163163_11053928 3300014325 Bacteria 876
52 Ga0163161_10162572 3300017792 Bacteria 1703
53 Ga0213876_10262105 3300021384 Bacteria 918
54 Ga0213875_10073670 3300021388 Bacteria 1593
55 Ga0207699_10445505 3300025906 Bacteria 928
56 Ga0207645_10092780 3300025907 Bacteria 1942
57 Ga0207707_10198685 3300025912 Bacteria 1748
58 Ga0207660_10147157 3300025917 Bacteria 1806
59 Ga0207652_10000230 3300025921 Bacteria 58620
60 Ga0207652_10241922 3300025921 Bacteria 1627
61 Ga0207664_10008213 3300025929 Bacteria 7269
62 Ga0207706_10085402 3300025933 Bacteria 2775
63 Ga0207668_10366090 3300025972 Bacteria 1209
64 Ga0207640_10089090 3300025981 Bacteria 2132
65 Ga0207677_10219820 3300026023 Bacteria 1523
66 Ga0207678_10003294 3300026067 Bacteria 14560
67 Ga0207708_10093462 3300026075 Bacteria 2321
68 Ga0207702_10049486 3300026078 Bacteria 3547
69 Ga0207702_10397481 3300026078 Bacteria 1328
70 Ga0207675_100001219 3300026118 Bacteria 25666
71 Ga0307407_10206782 3300031903 Bacteria 1319
72 Ga0307409_100352049 3300031995 Bacteria 1390
73 Ga0307415_100023821 3300032126 Bacteria 3809
74 Ga0395900_0007247 3300037418 Bacteria 11482
75 Ga0395898_0011156 3300037466 Bacteria 9356
76 Ga0436364_0201297 3300037853 Bacteria 8333
77 Ga0436364_0918807 3300037853 Bacteria 10029
78 Ga0400485_11362 3300038735 Bacteria 14937
79 Ga0400487_61290 3300039110 Bacteria 1127
80 Ga0436365_0026308 3300039437 Bacteria 2376
81 Ga0436365_0597439 3300039437 Bacteria 915
82 Ga0436365_1291936 3300039437 Bacteria 5837
83 Ga0436365_1796163 3300039437 Bacteria 2340
84 Ga0436365_1814299 3300039437 Bacteria 843
85 Ga0436363_0383068 3300039450 Bacteria 1247
86 Ga0436363_0468352 3300039450 Bacteria 980
87 Ga0436362_0122331 3300039453 Bacteria 1507
88 Ga0436362_0715512 3300039453 Bacteria 1944
89 Ga0439444_0029150 3300042437 Bacteria 1027
90 Ga0451577_0500215 3300042876 Bacteria 1103
91 Ga0466965_0151369 3300044683 Bacteria 1213
92 Ga0466963_0004185 3300044694 Bacteria 8355
93 Ga0466963_0115439 3300044694 Bacteria 1845
94 Ga0466963_0257009 3300044694 Bacteria 1226
95 Ga0453684_0179915 3300044712 Bacteria 2483
96 Ga0466971_0027315 3300044719 Bacteria 2556
97 Ga0466957_0126893 3300044842 Bacteria 1631
98 Ga0466957_0137551 3300044842 Bacteria 1571
99 Ga0466960_0117935 3300044901 Bacteria 1387
100 Ga0466960_0142587 3300044901 Bacteria 1274
101 Ga0451576_0607152 3300045051 Bacteria 1150
102 Ga0466958_0111722 3300045836 Bacteria 1706
103 Ga0466958_0213380 3300045836 Bacteria 1230
104 Ga0466967_0085069 3300045976 Bacteria 2863
105 Ga0466967_0326094 3300045976 Bacteria 1482
106 Ga0466967_0332204 3300045976 Bacteria 1468
107 Ga0495590_0038098 3300046457 Bacteria 1676
108 Ga0495584_0105211 3300046491 Bacteria 1427
109 Ga0495594_0000035 3300046499 Bacteria 61175
110 Ga0495630_0426688 3300046517 Bacteria 1016
111 Ga0495644_0040731 3300046523 Bacteria 1751
112 Ga0495665_0110816 3300046531 Bacteria 1440
113 Ga0495640_0154929 3300046533 Bacteria 1471
114 Ga0495622_0000171 3300046557 Bacteria 53421
115 Ga0495647_0023123 3300046681 Bacteria 2252
116 Ga0495676_0020559 3300047321 Bacteria 5788
117 Ga0495684_0402141 3300047471 Bacteria 961
118 Ga0495686_0151557 3300047472 Bacteria 1361
119 Ga0495614_0147644 3300048089 Bacteria 1048
120 Ga0496112_0086751 3300048915 Bacteria 3096
121 Ga0496113_0035919 3300048916 Bacteria 3628
122 Ga0496113_0148215 3300048916 Bacteria 1850
123 Ga0496121_0134759 3300048924 Bacteria 1842
124 Ga0496126_0009233 3300048929 Bacteria 10513
125 Ga0501031_0116041 3300049568 Bacteria 1749
126 Ga0501031_0205003 3300049568 Bacteria 1286
127 Ga0501031_0387991 3300049568 Bacteria 903
128 Ga0501033_0284322 3300049570 Bacteria 1167
129 Ga0501034_0083959 3300049571 Bacteria 3187
130 Ga0501039_0006393 3300049575 Bacteria 8952
131 Ga0501040_0172377 3300049576 Bacteria 1532
132 Ga0501040_0277811 3300049576 Bacteria 1196
133 Ga0501040_0394713 3300049576 Bacteria 993
134 Ga0501041_0039181 3300049577 Bacteria 2876
135 Ga0501041_0127814 3300049577 Bacteria 1583
136 Ga0501042_0169358 3300049578 Bacteria 1576
137 Ga0501043_0125724 3300049579 Bacteria 2011
138 Ga0501043_0212075 3300049579 Bacteria 1501
139 Ga0501043_0403717 3300049579 Bacteria 1032
140 Ga0501047_0048571 3300049581 Bacteria 4098
141 Ga0501047_0137481 3300049581 Bacteria 2323
142 Ga0501047_0259829 3300049581 Bacteria 1584
143 Ga0501048_0140907 3300049582 Bacteria 1705
144 Ga0501048_0310640 3300049582 Bacteria 1122
145 Ga0501069_0001110 3300049585 Bacteria 12992
146 Ga0501070_0064938 3300049586 Bacteria 3022
147 Ga0501070_0217780 3300049586 Bacteria 1566
148 Ga0501070_0403746 3300049586 Bacteria 1105
149 Ga0501071_0047528 3300049587 Bacteria 3083
150 Ga0501071_0235321 3300049587 Bacteria 1380
151 Ga0501071_0248492 3300049587 Bacteria 1342
152 Ga0501071_0319981 3300049587 Bacteria 1178
153 Ga0501072_0021206 3300049588 Bacteria 5039
154 Ga0501072_0086856 3300049588 Bacteria 2482
155 Ga0501072_0405536 3300049588 Bacteria 1081
156 Ga0501074_0242961 3300049590 Bacteria 1280
157 Ga0501074_0247777 3300049590 Bacteria 1267
158 Ga0501075_0117242 3300049591 Bacteria 2024
159 Ga0501075_0608436 3300049591 Bacteria 833
160 Ga0501076_0543001 3300049592 Bacteria 958
161 Ga0501077_0125787 3300049593 Bacteria 1625
162 Ga0501079_0135488 3300049741 Bacteria 1917
163 Ga0501080_0111830 3300049742 Bacteria 2532
164 Ga0501080_0290563 3300049742 Bacteria 1484
165 Ga0501083_0004028 3300049744 Bacteria 10327
166 Ga0501083_0238570 3300049744 Bacteria 1184
167 Ga0501035_0300397 3300049822 Bacteria 1353
168 Ga0501044_0105792 3300049823 Bacteria 2826
169 Ga0501045_0028404 3300049824 Bacteria 4036
170 Ga0501045_0047021 3300049824 Bacteria 3143
171 Ga0501045_0107619 3300049824 Bacteria 2066
172 nmdc:mga03683_73937_c1 3300050489 Bacteria 1461
173 nmdc:mga05p37_252477_c1 3300050507 Bacteria 2115
174 nmdc:mga05p37_343667_c1 3300050507 Bacteria 1759
175 nmdc:mga09592_102366_c1 3300050508 Bacteria 2454
176 nmdc:mga09592_15201_c1 3300050508 Bacteria 6290
177 nmdc:mga0qj67_1666_c1 3300050509 Bacteria 15659
178 nmdc:mga0qj67_56167_c1 3300050509 Bacteria 3121
179 nmdc:mga0qj67_57276_c1 3300050509 Bacteria 3089
180 nmdc:mga06r32_204090_c1 3300050510 Bacteria 1964
181 nmdc:mga06r32_753_c1 3300050510 Bacteria 28479
182 nmdc:mga06r32_77129_c1 3300050510 Bacteria 3237
183 Ga0501084_0000170 3300054114 Bacteria 50710
184 Ga0501082_0223649 3300060353 Bacteria 1638
185 Ga0466962_0070438 3300061719 Bacteria 1670
186 Ga0075363_100277538
187 JGI25404J52841_10005512
188 Ga0070658_10164781
189 Ga0070676_10023814
190 Ga0068868_100119566
191 Ga0070674_100235379
192 Ga0070714_100451805
193 Ga0070714_100575437
194 Ga0070710_10006842
195 Ga0070705_100003781
196 Ga0070705_100033164
197 Ga0070700_100287535
198 Ga0070708_100009573
199 Ga0070663_100000286
200 Ga0070662_100145656
201 Ga0070681_10181522
202 Ga0068867_100175781
203 Ga0070698_100034771
204 Ga0070679_100003713
205 Ga0070684_100628695
206 Ga0070696_100052275
207 Ga0068856_100061787
208 Ga0068866_10080642
209 Ga0068861_100003443
210 Ga0081455_10010295
211 Ga0081455_10140842
212 Ga0081538_10001087
213 Ga0081538_10010604
214 Ga0081538_10013570
215 Ga0081538_10028151
216 Ga0081539_10017104
217 Ga0075364_10061340
218 Ga0075362_10068548
219 Ga0075428_100053893
220 Ga0075428_100096971
221 Ga0075430_100002368
222 Ga0075430_100437462
223 Ga0075431_100000253
224 Ga0075431_100455000
225 Ga0075429_100010454
226 Ga0075429_100142962
227 Ga0111539_10435449
228 Ga0105245_10116938
229 Ga0114129_10105823
230 Ga0105238_10738167
231 Ga0105249_10011411
232 Ga0105239_10178438
233 Ga0105239_10649332
234 Ga0157378_10239893
235 Ga0163162_10321277
236 Ga0163163_11053928
237 Ga0163161_10162572
238 Ga0213876_10262105
239 Ga0213875_10073670
240 Ga0207699_10445505
241 Ga0207645_10092780
242 Ga0207707_10198685
243 Ga0207660_10147157
244 Ga0207652_10000230
245 Ga0207652_10241922
246 Ga0207664_10008213
247 Ga0207706_10085402
248 Ga0207668_10366090
249 Ga0207640_10089090
250 Ga0207677_10219820
251 Ga0207678_10003294
252 Ga0207708_10093462
253 Ga0207702_10049486
254 Ga0207702_10397481
255 Ga0207675_100001219
256 Ga0307407_10206782
257 Ga0307409_100352049
258 Ga0307415_100023821
259 Ga0395900_0007247
260 Ga0395898_0011156
261 Ga0436364_0201297
262 Ga0436364_0918807
263 Ga0400485_11362
264 Ga0400487_61290
265 Ga0436365_0026308
266 Ga0436365_0597439
267 Ga0436365_1291936
268 Ga0436365_1796163
269 Ga0436365_1814299
270 Ga0436363_0383068
271 Ga0436363_0468352
272 Ga0436362_0122331
273 Ga0436362_0715512
274 Ga0439444_0029150
275 Ga0451577_0500215
276 Ga0466965_0151369
277 Ga0466963_0004185
278 Ga0466963_0115439
279 Ga0466963_0257009
280 Ga0453684_0179915
281 Ga0466971_0027315
282 Ga0466957_0126893
283 Ga0466957_0137551
284 Ga0466960_0117935
285 Ga0466960_0142587
286 Ga0451576_0607152
287 Ga0466958_0111722
288 Ga0466958_0213380
289 Ga0466967_0085069
290 Ga0466967_0326094
291 Ga0466967_0332204
292 Ga0495590_0038098
293 Ga0495584_0105211
294 Ga0495594_0000035
295 Ga0495630_0426688
296 Ga0495644_0040731
297 Ga0495665_0110816
298 Ga0495640_0154929
299 Ga0495622_0000171
300 Ga0495647_0023123
301 Ga0495676_0020559
302 Ga0495684_0402141
303 Ga0495686_0151557
304 Ga0495614_0147644
305 Ga0496112_0086751
306 Ga0496113_0035919
307 Ga0496113_0148215
308 Ga0496121_0134759
309 Ga0496126_0009233
310 Ga0501031_0116041
311 Ga0501031_0205003
312 Ga0501031_0387991
313 Ga0501033_0284322
314 Ga0501034_0083959
315 Ga0501039_0006393
316 Ga0501040_0172377
317 Ga0501040_0277811
318 Ga0501040_0394713
319 Ga0501041_0039181
320 Ga0501041_0127814
321 Ga0501042_0169358
322 Ga0501043_0125724
323 Ga0501043_0212075
324 Ga0501043_0403717
325 Ga0501047_0048571
326 Ga0501047_0137481
327 Ga0501047_0259829
328 Ga0501048_0140907
329 Ga0501048_0310640
330 Ga0501069_0001110
331 Ga0501070_0064938
332 Ga0501070_0217780
333 Ga0501070_0403746
334 Ga0501071_0047528
335 Ga0501071_0235321
336 Ga0501071_0248492
337 Ga0501071_0319981
338 Ga0501072_0021206
339 Ga0501072_0086856
340 Ga0501072_0405536
341 Ga0501074_0242961
342 Ga0501074_0247777
343 Ga0501075_0117242
344 Ga0501075_0608436
345 Ga0501076_0543001
346 Ga0501077_0125787
347 Ga0501079_0135488
348 Ga0501080_0111830
349 Ga0501080_0290563
350 Ga0501083_0004028
351 Ga0501083_0238570
352 Ga0501035_0300397
353 Ga0501044_0105792
354 Ga0501045_0028404
355 Ga0501045_0047021
356 Ga0501045_0107619
357 nmdc:mga03683_73937_c1
358 nmdc:mga05p37_252477_c1
359 nmdc:mga05p37_343667_c1
360 nmdc:mga09592_102366_c1
361 nmdc:mga09592_15201_c1
362 nmdc:mga0qj67_1666_c1
363 nmdc:mga0qj67_56167_c1
364 nmdc:mga0qj67_57276_c1
365 nmdc:mga06r32_204090_c1
366 nmdc:mga06r32_753_c1
367 nmdc:mga06r32_77129_c1
368 Ga0501084_0000170
369 Ga0501082_0223649
370 Ga0466962_0070438

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

80

278

0.93

PF01061

ABC2_membrane

ABC-2 type transporter

39

250

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7p03-assembly1.cif.gz_A cryo-em structure of pdr5 from saccharomyces cerevisiae in inward-facing conformation without nucleotides 0.7257 7 251
6ffc-assembly1.cif.gz_A structure of an inhibitor-bound abc transporter 0.7254 7 251
6eti-assembly1.cif.gz_A structure of inhibitor-bound abcg2 0.72 7 251
8p7w-assembly1.cif.gz_B structure of 5d3-fab and nanobody(nb8)-bound abcg2 0.7193 7 255
7f02-assembly1.cif.gz_F cytochrome c-type biogenesis protein ccmabcd from e. coli 0.7105 11 255
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8338 52 250 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8254 52 249 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7834 37 250 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6606 37 250 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6598 52 250 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A257NJ05-F1-model_v4 ABC transporter 0.9688 107 253 GO:0016020
GO:0140359
AF-A0A365ZG32-F1-model_v4 Transport permease protein 0.9667 1 253 GO:0043190
GO:0140359
AF-A0A660L0G8-F1-model_v4 Transport permease protein 0.9661 1 253 GO:0043190
GO:0140359
AF-A0A4V1ZIZ9-F1-model_v4 deleted 0.9646 1 257
AF-A0A2S1Z626-F1-model_v4 Transport permease protein 0.962 2 252 GO:0043190
GO:0140359

Map