F283451

General Info

Members Datasets Scaffolds Average Seq Length
184 143 368 435

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2811994879|2812359412
Length 479
Sequence PRDGVASLGLPAAAFLSLYGNARRNGRLVAVSTTGSQRPAQVSAARRRTVIDALRRGAVPDSGLDLLATGLGRFEAALDAELDAVASGGSVFKAVRGEYGSGKTFFTRWLGERAKRRNFAVAEIQVSENETPLHRLETVYRRLTERLTTSSFPPSALRPVVDAWFYALEEDALAAGATEEELPREVEQLLVARLAEVSRHAPLFATALRGYRAALVDGDEATAAAVLAWLGGQPHVAASARRSAGVRGDLDHFGALGFLQGLLTVLRDSGHTGLFVVLDEVETLQRVRSDARDKALNALRQLIDEVHSGRFPGLYLVITGTPAFYDGQQGVQRLAPLAQRLATDFTTDPRFDNPRAVQIRLPGFNHESLVGLGLTIRDLYADAAETPERVRKVVDDTYVADLAVAVGGALGGKVGVAPRLFLKKLVGDVLDRVDQFADFDPRRHYRLTVTGSELTDVERNLAATVSGGSASADDIDLEL

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
21 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
22 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
29 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
39 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
43 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
46 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
47 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
48 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
49 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
60 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
61 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
62 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
67 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
68 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
69 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
70 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
71 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
76 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
95 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
96 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
97 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
98 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
99 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
100 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
101 2643221548 Streptomyces sp. Root55 Isolate Unclassified
102 2643221576 Nocardioides sp. Root614 Isolate Unclassified
103 2643221590 Nocardioides sp. Root682 Isolate Unclassified
104 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
105 2643221692 Nocardia sp. Root136 Isolate Unclassified
106 2643221714 Streptomyces sp. Root264 Isolate Unclassified
107 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
108 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
109 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
110 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
111 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
112 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
113 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
114 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
115 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
116 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
117 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
118 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
119 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
120 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
121 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
122 2867428634 Streptomyces sp. RP5T Isolate Unclassified
123 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
124 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
125 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
126 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
127 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
128 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
129 2902582711 Micromonospora sp. AP08 Isolate Unclassified
130 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
131 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
132 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
133 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
134 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
135 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
136 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
137 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
138 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
139 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
140 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
141 8054920844 Frankia tisae Agncl-8 Isolate Nodule
142 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule
143 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.37
Metatranscriptomes 0
Isolates 26.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.43
Nodule 3.8
Rhizoplane 1.63
Rhizosphere 64.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10004301 3300003322 Bacteria 38618
2 JGI25160J50197_1000484 3300003354 Bacteria 24054
3 Ga0055527_1000023 3300003760 Bacteria 204513
4 Ga0055542_1000023 3300003762 Bacteria 292964
5 Ga0055529_1000050 3300003763 Bacteria 206297
6 Ga0070658_10074909 3300005327 Bacteria 2776
7 Ga0070658_10240597 3300005327 Bacteria 1534
8 Ga0070706_100125409 3300005467 Bacteria 2394
9 Ga0070684_100003153 3300005535 Bacteria 12313
10 Ga0068857_100042435 3300005577 Bacteria 4036
11 Ga0068856_100038441 3300005614 Bacteria 4698
12 Ga0068870_10116072 3300005840 Bacteria 1535
13 Ga0068862_100000080 3300005844 Bacteria 113304
14 Ga0070717_10012346 3300006028 Bacteria 6509
15 Ga0070717_10034091 3300006028 Bacteria 4112
16 Ga0070715_10016353 3300006163 Bacteria 2786
17 Ga0070712_100075956 3300006175 Bacteria 2418
18 Ga0075428_100006390 3300006844 Bacteria 13117
19 Ga0075430_100001580 3300006846 Bacteria 18599
20 Ga0075430_100048922 3300006846 Bacteria 3569
21 Ga0075431_100001431 3300006847 Bacteria 21956
22 Ga0075429_100006085 3300006880 Bacteria 10439
23 Ga0075429_100028714 3300006880 Bacteria 4831
24 Ga0105247_10000349 3300009101 Bacteria 40025
25 Ga0182008_10000443 3300014497 Bacteria 31475
26 Ga0182008_10011958 3300014497 Bacteria 4600
27 Ga0182007_10009759 3300015262 Bacteria 3841
28 Ga0182007_10020682 3300015262 Bacteria 2348
29 Ga0213875_10000355 3300021388 Bacteria 42949
30 Ga0213875_10001394 3300021388 Bacteria 15802
31 Ga0209672_100064 3300025228 Bacteria 204609
32 Ga0209147_100527 3300025229 Bacteria 22036
33 Ga0209148_1000108 3300025254 Bacteria 204609
34 Ga0209455_1000102 3300025272 Bacteria 204609
35 Ga0207426_1000794 3300025302 Bacteria 34274
36 Ga0207710_10000295 3300025900 Bacteria 40112
37 Ga0207693_10071197 3300025915 Bacteria 2721
38 Ga0207711_10008903 3300025941 Bacteria 8392
39 Ga0268265_10000085 3300028380 Bacteria 119336
40 Ga0307517_10125451 3300028786 Bacteria 1875
41 Ga0265338_10028420 3300028800 Bacteria 5577
42 Ga0307512_10006315 3300030522 Bacteria 12030
43 Ga0307513_10004012 3300031456 Bacteria 19756
44 Ga0307513_10006782 3300031456 Bacteria 14935
45 Ga0307508_10001379 3300031616 Bacteria 27375
46 Ga0307508_10008996 3300031616 Bacteria 9201
47 Ga0307508_10113306 3300031616 Bacteria 2312
48 Ga0307514_10014592 3300031649 Bacteria 6500
49 Ga0307514_10021929 3300031649 Bacteria 5199
50 Ga0307516_10035161 3300031730 Bacteria 5029
51 Ga0307413_10002204 3300031824 Bacteria 7841
52 Ga0307416_100059180 3300032002 Bacteria 3111
53 Ga0307507_10002355 3300033179 Bacteria 40049
54 Ga0373942_0000963 3300035207 Bacteria 7842
55 Ga0436364_0050479 3300037853 Bacteria 121594
56 Ga0436364_0803100 3300037853 Bacteria 16951
57 Ga0439442_001605 3300042002 Bacteria 4433
58 Ga0466965_0002861 3300044683 Bacteria 7447
59 Ga0466966_0005945 3300044684 Bacteria 8051
60 Ga0466966_0035949 3300044684 Bacteria 3200
61 Ga0466961_0001849 3300044693 Bacteria 13141
62 Ga0466963_0001784 3300044694 Bacteria 11714
63 Ga0466964_0014363 3300044706 Bacteria 3011
64 Ga0466971_0001583 3300044719 Bacteria 9606
65 Ga0466970_0006225 3300044765 Bacteria 5953
66 Ga0466957_0002302 3300044842 Bacteria 10229
67 Ga0466959_0041444 3300045049 Bacteria 3399
68 Ga0466958_0000993 3300045836 Bacteria 12827
69 Ga0466967_0005394 3300045976 Bacteria 8855
70 Ga0495603_0024111 3300046455 Bacteria 3680
71 Ga0495629_0148945 3300046459 Bacteria 1627
72 Ga0495585_0005505 3300046492 Bacteria 7971
73 Ga0495585_0016807 3300046492 Bacteria 4239
74 Ga0495583_0008547 3300046506 Bacteria 6243
75 Ga0495583_0061311 3300046506 Bacteria 1679
76 Ga0495667_0053341 3300046559 Bacteria 2663
77 Ga0495611_0000958 3300046648 Bacteria 15385
78 Ga0495611_0005339 3300046648 Bacteria 5499
79 Ga0495625_0002837 3300046660 Bacteria 18210
80 Ga0495588_0000329 3300046674 Bacteria 31449
81 Ga0495613_0006160 3300046689 Bacteria 8979
82 Ga0495613_0017218 3300046689 Bacteria 5383
83 Ga0495613_0145452 3300046689 Bacteria 1692
84 Ga0495649_0121970 3300046694 Bacteria 1378
85 Ga0495600_0011724 3300046809 Bacteria 5471
86 Ga0495660_0015965 3300046810 Bacteria 4333
87 Ga0495660_0108997 3300046810 Bacteria 1415
88 Ga0495676_0000255 3300047321 Bacteria 42959
89 Ga0495676_0113923 3300047321 Bacteria 1979
90 Ga0495683_0000413 3300047323 Bacteria 34259
91 Ga0495687_001262 3300047443 Bacteria 23974
92 Ga0496108_0000073 3300048911 Bacteria 112479
93 Ga0496108_0000075 3300048911 Bacteria 105616
94 Ga0496115_0014501 3300048918 Bacteria 5967
95 Ga0496119_0000298 3300048922 Bacteria 69583
96 Ga0496120_0000223 3300048923 Bacteria 97882
97 Ga0501031_0009065 3300049568 Bacteria 6470
98 Ga0501032_0012478 3300049569 Bacteria 6071
99 Ga0501032_0053614 3300049569 Bacteria 2715
100 Ga0501033_0030095 3300049570 Bacteria 4080
101 Ga0501033_0191315 3300049570 Bacteria 1464
102 Ga0501034_0018334 3300049571 Bacteria 7180
103 Ga0501036_0096385 3300049572 Bacteria 2501
104 Ga0501037_0054575 3300049573 Bacteria 2923
105 Ga0501038_0018385 3300049574 Bacteria 6309
106 Ga0501038_0171935 3300049574 Bacteria 1753
107 Ga0501038_0248465 3300049574 Bacteria 1410
108 Ga0501042_0000262 3300049578 Bacteria 25723
109 Ga0501042_0003136 3300049578 Bacteria 10300
110 Ga0501046_0048062 3300049580 Bacteria 3380
111 Ga0501046_0054350 3300049580 Bacteria 3151
112 Ga0501046_0262833 3300049580 Bacteria 1267
113 Ga0501047_0000005 3300049581 Bacteria 456524
114 Ga0501047_0000590 3300049581 Bacteria 38637
115 Ga0501047_0005297 3300049581 Bacteria 12121
116 Ga0501047_0009109 3300049581 Bacteria 9375
117 Ga0501047_0058198 3300049581 Bacteria 3734
118 Ga0501048_0172121 3300049582 Bacteria 1534
119 Ga0501070_0050831 3300049586 Bacteria 3440
120 Ga0501080_0094691 3300049742 Bacteria 2773
121 Ga0501035_0025035 3300049822 Bacteria 5472
122 Ga0501035_0108552 3300049822 Bacteria 2433
123 Ga0501044_0011987 3300049823 Bacteria 9392
124 Ga0501044_0020562 3300049823 Bacteria 7046
125 Ga0501044_0036852 3300049823 Bacteria 5115
126 Ga0501044_0048431 3300049823 Bacteria 4391
127 Ga0501044_0074560 3300049823 Bacteria 3446
128 nmdc:mga09592_25709_c1 3300050508 Bacteria 4874
129 nmdc:mga09592_9355_c1 3300050508 Bacteria 7969
130 nmdc:mga0qj67_41610_c1 3300050509 Bacteria 3614
131 nmdc:mga0qj67_5044_c1 3300050509 Bacteria 9598
132 nmdc:mga06r32_1378_c1 3300050510 Bacteria 21970
133 Ga0495612_0003783 3300053078 Bacteria 6291
134 Ga0500566_0084865 3300053094 Bacteria 1757
135 Ga0466962_0001257 3300061719 Bacteria 11695
136 2812359412 2811994879 Bacteria 9313447
137 2515759265 2515154137 Bacteria 5711575
138 2554260347 2554235005 Bacteria 6457341
139 2616902607 2616644941 Bacteria 8510691
140 2643765403 2643221548 Bacteria 8053412
141 2643889595 2643221576 Bacteria 5214352
142 2643958651 2643221590 Bacteria 5214697
143 2644462526 2643221682 Bacteria 6743283
144 2644514559 2643221692 Bacteria 7282860
145 2644632163 2643221714 Bacteria 9015452
146 2676204085 2675902999 Bacteria 9438463
147 2676205895 2675902999 Bacteria 9438463
148 2676496921 2675903060 Bacteria 10051191
149 2686538303 2684623035 Bacteria 8032739
150 2689993663 2687453743 Bacteria 8361025
151 2738668801 2738541264 Bacteria 5935393
152 2739147993 2738541356 Bacteria 5935017
153 2772645969 2772190715 Bacteria 6959372
154 2774848661 2773857921 Bacteria 9435764
155 2774850470 2773857921 Bacteria 9435764
156 2808840792 2808606359 Bacteria 9866990
157 2808919389 2808606375 Bacteria 9466072
158 2835191712 2835188231 Bacteria 3476928
159 2858903680 2858902515 Bacteria 7086037
160 2862512392 2862507626 Bacteria 9425308
161 2863409144 2863404153 Bacteria 9672205
162 2867302985 2867302475 Bacteria 7087181
163 2867431386 2867428634 Bacteria 9590268
164 2869073009 2869068681 Bacteria 7205615
165 2873321177 2873314349 Bacteria 8512634
166 2880501389 2880495981 Bacteria 7340502
167 2891562542 2891554331 Bacteria 8812224
168 2895890001 2895880812 Bacteria 11255272
169 2899361779 2899359706 Bacteria 10940472
170 2902583024 2902582711 Bacteria 6187705
171 2902841996 2902837492 Bacteria 6697721
172 2904502589 2904501621 Bacteria 3401437
173 2912718830 2912715099 Bacteria 9460473
174 2919445275 2919443155 Bacteria 4072969
175 2939663663 2939660829 Bacteria 3784848
176 2946074753 2946072368 Bacteria 8999607
177 2954001400 2953998280 Bacteria 4812144
178 2990059875 2990059506 Bacteria 9321252
179 3006488883 3006486233 Bacteria 8157040
180 8048408881 8048406513 Bacteria 8936924
181 8053948094 8053945823 Bacteria 8962862
182 8054924786 8054920844 Bacteria 7068637
183 8055158010 8055157932 Bacteria 6429399
184 8056448333 8056447290 Bacteria 7680491
185 rootL2_10004301
186 JGI25160J50197_1000484
187 Ga0055527_1000023
188 Ga0055542_1000023
189 Ga0055529_1000050
190 Ga0070658_10074909
191 Ga0070658_10240597
192 Ga0070706_100125409
193 Ga0070684_100003153
194 Ga0068857_100042435
195 Ga0068856_100038441
196 Ga0068870_10116072
197 Ga0068862_100000080
198 Ga0070717_10012346
199 Ga0070717_10034091
200 Ga0070715_10016353
201 Ga0070712_100075956
202 Ga0075428_100006390
203 Ga0075430_100001580
204 Ga0075430_100048922
205 Ga0075431_100001431
206 Ga0075429_100006085
207 Ga0075429_100028714
208 Ga0105247_10000349
209 Ga0182008_10000443
210 Ga0182008_10011958
211 Ga0182007_10009759
212 Ga0182007_10020682
213 Ga0213875_10000355
214 Ga0213875_10001394
215 Ga0209672_100064
216 Ga0209147_100527
217 Ga0209148_1000108
218 Ga0209455_1000102
219 Ga0207426_1000794
220 Ga0207710_10000295
221 Ga0207693_10071197
222 Ga0207711_10008903
223 Ga0268265_10000085
224 Ga0307517_10125451
225 Ga0265338_10028420
226 Ga0307512_10006315
227 Ga0307513_10004012
228 Ga0307513_10006782
229 Ga0307508_10001379
230 Ga0307508_10008996
231 Ga0307508_10113306
232 Ga0307514_10014592
233 Ga0307514_10021929
234 Ga0307516_10035161
235 Ga0307413_10002204
236 Ga0307416_100059180
237 Ga0307507_10002355
238 Ga0373942_0000963
239 Ga0436364_0050479
240 Ga0436364_0803100
241 Ga0439442_001605
242 Ga0466965_0002861
243 Ga0466966_0005945
244 Ga0466966_0035949
245 Ga0466961_0001849
246 Ga0466963_0001784
247 Ga0466964_0014363
248 Ga0466971_0001583
249 Ga0466970_0006225
250 Ga0466957_0002302
251 Ga0466959_0041444
252 Ga0466958_0000993
253 Ga0466967_0005394
254 Ga0495603_0024111
255 Ga0495629_0148945
256 Ga0495585_0005505
257 Ga0495585_0016807
258 Ga0495583_0008547
259 Ga0495583_0061311
260 Ga0495667_0053341
261 Ga0495611_0000958
262 Ga0495611_0005339
263 Ga0495625_0002837
264 Ga0495588_0000329
265 Ga0495613_0006160
266 Ga0495613_0017218
267 Ga0495613_0145452
268 Ga0495649_0121970
269 Ga0495600_0011724
270 Ga0495660_0015965
271 Ga0495660_0108997
272 Ga0495676_0000255
273 Ga0495676_0113923
274 Ga0495683_0000413
275 Ga0495687_001262
276 Ga0496108_0000073
277 Ga0496108_0000075
278 Ga0496115_0014501
279 Ga0496119_0000298
280 Ga0496120_0000223
281 Ga0501031_0009065
282 Ga0501032_0012478
283 Ga0501032_0053614
284 Ga0501033_0030095
285 Ga0501033_0191315
286 Ga0501034_0018334
287 Ga0501036_0096385
288 Ga0501037_0054575
289 Ga0501038_0018385
290 Ga0501038_0171935
291 Ga0501038_0248465
292 Ga0501042_0000262
293 Ga0501042_0003136
294 Ga0501046_0048062
295 Ga0501046_0054350
296 Ga0501046_0262833
297 Ga0501047_0000005
298 Ga0501047_0000590
299 Ga0501047_0005297
300 Ga0501047_0009109
301 Ga0501047_0058198
302 Ga0501048_0172121
303 Ga0501070_0050831
304 Ga0501080_0094691
305 Ga0501035_0025035
306 Ga0501035_0108552
307 Ga0501044_0011987
308 Ga0501044_0020562
309 Ga0501044_0036852
310 Ga0501044_0048431
311 Ga0501044_0074560
312 nmdc:mga09592_25709_c1
313 nmdc:mga09592_9355_c1
314 nmdc:mga0qj67_41610_c1
315 nmdc:mga0qj67_5044_c1
316 nmdc:mga06r32_1378_c1
317 Ga0495612_0003783
318 Ga0500566_0084865
319 Ga0466962_0001257
320 2812359412
321 2515759265
322 2554260347
323 2616902607
324 2643765403
325 2643889595
326 2643958651
327 2644462526
328 2644514559
329 2644632163
330 2676204085
331 2676205895
332 2676496921
333 2686538303
334 2689993663
335 2738668801
336 2739147993
337 2772645969
338 2774848661
339 2774850470
340 2808840792
341 2808919389
342 2835191712
343 2858903680
344 2862512392
345 2863409144
346 2867302985
347 2867431386
348 2869073009
349 2873321177
350 2880501389
351 2891562542
352 2895890001
353 2899361779
354 2902583024
355 2902841996
356 2904502589
357 2912718830
358 2919445275
359 2939663663
360 2946074753
361 2954001400
362 2990059875
363 3006488883
364 8048408881
365 8053948094
366 8054924786
367 8055158010
368 8056448333

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10923

BrxC_BrxD

BREX system ATP-binding protein BrxC/D

42

449

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x06-assembly1.cif.gz_H dna replication regulation protein 0.6467 45 345
7tjf-assembly1.cif.gz_D s. cerevisiae orc bound to 84 bp ars1 dna 0.6169 17 398
1fnn-assembly2.cif.gz_B crystal structure of cdc6p from pyrobaculum aerophilum 0.6102 41 392
2zud-assembly1.cif.gz_B crystal structure of left-handed rada filament 0.5928 229 291
5bq5-assembly3.cif.gz_C crystal structure of the istb aaa+ domain bound to adp-bef3 0.5919 42 335
ID Description Score Start End Superfamily
af_Q4CQ22_1210_1334_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6613 237 310 3.40.50.300
af_P69931_1_164_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6491 48 331 3.40.50.300
af_O74941_353_511_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6475 244 291 3.40.50.300
af_A0A1D8PCY1_379_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6434 40 333 3.40.50.300
af_Q58184_27_238_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6416 39 310 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257TUF4-F1-model_v4 ATP-binding protein 0.9776 11 129 GO:0005524
AF-A0A7X6SU55-F1-model_v4 DUF2791 family P-loop domain-containing protein 0.9724 10 118
AF-A0A355GC56-F1-model_v4 BREX system ATP-binding protein BrxD 0.9634 11 368 GO:0005524
AF-A0A7X7XL47-F1-model_v4 BREX system ATP-binding protein BrxD 0.9612 11 291 GO:0005524
AF-A0A352L0S1-F1-model_v4 BREX system ATP-binding protein BrxD 0.9565 11 405 GO:0005524

Map