F283358
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 102 | 368 | 313 |
Family's Representative Sequence
| Representative Sequence | 3300050513|nmdc:mga0rr50_193177_c1|nmdc:mga0rr50_193177_c1_95_1141 |
| Length | 348 |
| Sequence | MFRSHPPFASLLRVGTPARRDSVLAQLSNYLYSISMQMLPRPDIILTHESDLDGLISGVLLKRLARKLFNFDVPLEAYHYNTWRQREPRESAAWVADLSFEPRLDKANWLIVDHHATEAVPKKAQLIHDLNKSAGLLAYELCKEHDLASPELDRLVHLNNVSDLFLESDPEFVLANDYANLVKVYQFWNLHALIDGQLERLLNHPLLEVMAIKRKIEDPLGLEWSRKNVIEISPTVGFVDTVVGNNNLIVHQLLEQQATRFPVLLTLFRRANGTMIVSLRSRNGEAIKVAEKLQGGGHANACGASLPKSVRSIPDAVDYLRNVLNPAPAQASALNSLEAAFSAIEAKG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 2 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 17 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 18 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 19 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 22 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 24 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 25 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 27 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 52 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 53 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 54 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 55 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 56 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 57 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 58 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 59 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 60 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 61 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 62 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 63 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 64 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 65 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 67 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 68 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 69 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 70 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 71 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 72 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 73 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 74 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 75 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 76 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 77 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 78 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 99 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 101 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 102 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.54 |
| Rhizosphere | 98.37 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 27.72 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | nmdc:mga0rr50_193177_c1 | 3300050513 | Bacteria | 1669 |
| 2 | rootH2_10289297 | 3300003320 | Unclassified | 1777 |
| 3 | rootH1_10264173 | 3300003323 | Bacteria | 1500 |
| 4 | Ga0070690_100097978 | 3300005330 | Bacteria | 1940 |
| 5 | Ga0070690_100300805 | 3300005330 | Unclassified | 1150 |
| 6 | Ga0070689_100014305 | 3300005340 | Bacteria | 5761 |
| 7 | Ga0070689_100025604 | 3300005340 | Bacteria | 4434 |
| 8 | Ga0070689_100044772 | 3300005340 | Bacteria | 3405 |
| 9 | Ga0070691_10083535 | 3300005341 | Unclassified | 1567 |
| 10 | Ga0070675_100108177 | 3300005354 | Unclassified | 2348 |
| 11 | Ga0070688_100011645 | 3300005365 | Bacteria | 4895 |
| 12 | Ga0070714_100002898 | 3300005435 | Bacteria | 12696 |
| 13 | Ga0070700_100067941 | 3300005441 | Bacteria | 2265 |
| 14 | Ga0070700_100417229 | 3300005441 | Unclassified | 1013 |
| 15 | Ga0070694_100010048 | 3300005444 | Bacteria | 5819 |
| 16 | Ga0070685_10044062 | 3300005466 | Unclassified | 2553 |
| 17 | Ga0070699_100413719 | 3300005518 | Bacteria | 1220 |
| 18 | Ga0070686_100002909 | 3300005544 | Bacteria | 9398 |
| 19 | Ga0070704_100012801 | 3300005549 | Bacteria | 5187 |
| 20 | Ga0068855_100051111 | 3300005563 | Unclassified | 4869 |
| 21 | Ga0068855_100342226 | 3300005563 | Bacteria | 1649 |
| 22 | Ga0068855_100637682 | 3300005563 | Bacteria | 1145 |
| 23 | Ga0068856_100497830 | 3300005614 | Bacteria | 1239 |
| 24 | Ga0068859_100020728 | 3300005617 | Bacteria | 6596 |
| 25 | Ga0068859_100117832 | 3300005617 | Unclassified | 2721 |
| 26 | Ga0068859_100128343 | 3300005617 | Unclassified | 2607 |
| 27 | Ga0068859_100272397 | 3300005617 | Bacteria | 1785 |
| 28 | Ga0068859_100388036 | 3300005617 | Unclassified | 1492 |
| 29 | Ga0068859_100392124 | 3300005617 | Unclassified | 1484 |
| 30 | Ga0068864_100077635 | 3300005618 | Bacteria | 2905 |
| 31 | Ga0068864_100346703 | 3300005618 | Bacteria | 1400 |
| 32 | Ga0068864_100570795 | 3300005618 | Unclassified | 1095 |
| 33 | Ga0068863_100513234 | 3300005841 | Bacteria | 1181 |
| 34 | Ga0068858_100132883 | 3300005842 | Bacteria | 2334 |
| 35 | Ga0097621_100015205 | 3300006237 | Bacteria | 5784 |
| 36 | Ga0075428_100001526 | 3300006844 | Bacteria | 24770 |
| 37 | Ga0075428_100221311 | 3300006844 | Bacteria | 2044 |
| 38 | Ga0075436_100122391 | 3300006914 | Bacteria | 1821 |
| 39 | Ga0097620_100020729 | 3300006931 | Bacteria | 6596 |
| 40 | Ga0097620_100117833 | 3300006931 | Unclassified | 2721 |
| 41 | Ga0097620_100128346 | 3300006931 | Unclassified | 2607 |
| 42 | Ga0097620_100272404 | 3300006931 | Bacteria | 1785 |
| 43 | Ga0097620_100388062 | 3300006931 | Unclassified | 1492 |
| 44 | Ga0097620_100392140 | 3300006931 | Unclassified | 1484 |
| 45 | Ga0099795_10091970 | 3300007788 | Unclassified | 1177 |
| 46 | Ga0105240_10001939 | 3300009093 | Bacteria | 34313 |
| 47 | Ga0105240_10109649 | 3300009093 | Unclassified | 3342 |
| 48 | Ga0105240_10524923 | 3300009093 | Bacteria | 1313 |
| 49 | Ga0111539_10107845 | 3300009094 | Bacteria | 3268 |
| 50 | Ga0111539_10133709 | 3300009094 | Bacteria | 2904 |
| 51 | Ga0111539_10252244 | 3300009094 | Bacteria | 2054 |
| 52 | Ga0114129_11137626 | 3300009147 | Unclassified | 975 |
| 53 | Ga0105242_10301634 | 3300009176 | Bacteria | 1462 |
| 54 | Ga0105238_10003252 | 3300009551 | Bacteria | 16217 |
| 55 | Ga0105238_10063569 | 3300009551 | Bacteria | 3692 |
| 56 | Ga0105238_10093201 | 3300009551 | Unclassified | 3000 |
| 57 | Ga0105238_10334863 | 3300009551 | Bacteria | 1501 |
| 58 | Ga0105249_10247659 | 3300009553 | Bacteria | 1765 |
| 59 | Ga0157370_10091345 | 3300013104 | Bacteria | 2858 |
| 60 | Ga0157374_10323824 | 3300013296 | Bacteria | 1528 |
| 61 | Ga0163162_10098664 | 3300013306 | Bacteria | 3011 |
| 62 | Ga0163162_10390819 | 3300013306 | Bacteria | 1524 |
| 63 | Ga0163162_10780978 | 3300013306 | Unclassified | 1073 |
| 64 | Ga0157375_10000038 | 3300013308 | Bacteria | 171905 |
| 65 | Ga0157375_10481492 | 3300013308 | Unclassified | 1406 |
| 66 | Ga0163163_10000014 | 3300014325 | Bacteria | 231615 |
| 67 | Ga0157376_10173818 | 3300014969 | Bacteria | 1964 |
| 68 | Ga0157376_10339681 | 3300014969 | Unclassified | 1434 |
| 69 | Ga0207707_10076950 | 3300025912 | Bacteria | 2912 |
| 70 | Ga0207695_10008259 | 3300025913 | Bacteria | 13066 |
| 71 | Ga0207694_10055718 | 3300025924 | Bacteria | 3069 |
| 72 | Ga0207664_10011166 | 3300025929 | Bacteria | 6367 |
| 73 | Ga0207686_10268997 | 3300025934 | Bacteria | 1253 |
| 74 | Ga0207670_10044271 | 3300025936 | Unclassified | 2944 |
| 75 | Ga0207670_10045098 | 3300025936 | Bacteria | 2921 |
| 76 | Ga0207670_10093005 | 3300025936 | Bacteria | 2136 |
| 77 | Ga0207667_10183856 | 3300025949 | Bacteria | 2146 |
| 78 | Ga0207667_10255129 | 3300025949 | Bacteria | 1794 |
| 79 | Ga0207712_10352808 | 3300025961 | Bacteria | 1223 |
| 80 | Ga0207708_10343138 | 3300026075 | Unclassified | 1224 |
| 81 | Ga0207641_10217563 | 3300026088 | Unclassified | 1770 |
| 82 | Ga0207676_10581592 | 3300026095 | Bacteria | 1073 |
| 83 | Ga0207674_10048252 | 3300026116 | Unclassified | 4359 |
| 84 | Ga0207674_10501500 | 3300026116 | Unclassified | 1173 |
| 85 | Ga0207428_10098633 | 3300027907 | Bacteria | 2260 |
| 86 | Ga0265337_1007128 | 3300028556 | Bacteria | 4219 |
| 87 | Ga0265326_10007500 | 3300028558 | Bacteria | 3341 |
| 88 | Ga0265319_1000013 | 3300028563 | Bacteria | 180699 |
| 89 | Ga0265319_1029169 | 3300028563 | Bacteria | 1939 |
| 90 | Ga0265334_10009080 | 3300028573 | Bacteria | 4215 |
| 91 | Ga0265336_10039718 | 3300028666 | Unclassified | 1442 |
| 92 | Ga0265338_10000048 | 3300028800 | Bacteria | 218859 |
| 93 | Ga0265338_10000214 | 3300028800 | Bacteria | 106870 |
| 94 | Ga0265338_10001186 | 3300028800 | Bacteria | 43013 |
| 95 | Ga0265338_10001631 | 3300028800 | Bacteria | 35890 |
| 96 | Ga0265338_10002212 | 3300028800 | Bacteria | 29671 |
| 97 | Ga0265338_10002314 | 3300028800 | Bacteria | 28889 |
| 98 | Ga0265338_10002778 | 3300028800 | Bacteria | 25610 |
| 99 | Ga0265338_10007660 | 3300028800 | Bacteria | 13318 |
| 100 | Ga0265338_10008309 | 3300028800 | Bacteria | 12633 |
| 101 | Ga0265338_10008892 | 3300028800 | Bacteria | 12095 |
| 102 | Ga0265338_10054714 | 3300028800 | Unclassified | 3555 |
| 103 | Ga0265338_10065237 | 3300028800 | Bacteria | 3160 |
| 104 | Ga0265338_10067491 | 3300028800 | Bacteria | 3089 |
| 105 | Ga0265338_10088208 | 3300028800 | Bacteria | 2575 |
| 106 | Ga0265324_10000590 | 3300029957 | Bacteria | 24867 |
| 107 | Ga0265320_10007114 | 3300031240 | Bacteria | 6977 |
| 108 | Ga0265320_10040923 | 3300031240 | Unclassified | 2307 |
| 109 | Ga0265325_10016699 | 3300031241 | Bacteria | 4097 |
| 110 | Ga0265340_10103734 | 3300031247 | Unclassified | 1320 |
| 111 | Ga0265339_10002715 | 3300031249 | Bacteria | 12580 |
| 112 | Ga0265339_10007359 | 3300031249 | Bacteria | 7125 |
| 113 | Ga0265316_10000812 | 3300031344 | Bacteria | 34512 |
| 114 | Ga0265316_10165073 | 3300031344 | Bacteria | 1654 |
| 115 | Ga0265313_10001062 | 3300031595 | Bacteria | 26644 |
| 116 | Ga0265313_10004745 | 3300031595 | Bacteria | 10246 |
| 117 | Ga0265314_10006168 | 3300031711 | Bacteria | 10646 |
| 118 | Ga0265314_10137239 | 3300031711 | Bacteria | 1517 |
| 119 | Ga0265342_10053572 | 3300031712 | Bacteria | 2400 |
| 120 | Ga0373954_0127147 | 3300035118 | Bacteria | 1239 |
| 121 | Ga0373956_0015537 | 3300035119 | Bacteria | 3189 |
| 122 | Ga0373955_0242013 | 3300035172 | Unclassified | 1081 |
| 123 | Ga0373935_0045785 | 3300035692 | Bacteria | 2761 |
| 124 | Ga0373927_0012884 | 3300035695 | Bacteria | 5560 |
| 125 | Ga0373927_0139301 | 3300035695 | Unclassified | 1586 |
| 126 | Ga0373947_0009520 | 3300035725 | Bacteria | 5579 |
| 127 | Ga0373937_0402528 | 3300036401 | Unclassified | 1299 |
| 128 | Ga0373937_0492607 | 3300036401 | Unclassified | 1164 |
| 129 | Ga0373925_0008223 | 3300037068 | Bacteria | 7594 |
| 130 | Ga0373925_0019023 | 3300037068 | Bacteria | 4993 |
| 131 | Ga0451577_0002447 | 3300042876 | Bacteria | 22115 |
| 132 | Ga0451577_0102077 | 3300042876 | Unclassified | 2563 |
| 133 | Ga0451577_0308097 | 3300042876 | Bacteria | 1435 |
| 134 | Ga0453684_0001344 | 3300044712 | Bacteria | 72038 |
| 135 | Ga0453684_0009082 | 3300044712 | Bacteria | 17522 |
| 136 | Ga0453684_0014895 | 3300044712 | Bacteria | 12370 |
| 137 | Ga0453684_0519162 | 3300044712 | Bacteria | 1316 |
| 138 | Ga0451576_0167078 | 3300045051 | Bacteria | 2296 |
| 139 | Ga0451576_0260151 | 3300045051 | Bacteria | 1814 |
| 140 | Ga0451576_0275428 | 3300045051 | Bacteria | 1759 |
| 141 | Ga0451576_0613838 | 3300045051 | Bacteria | 1143 |
| 142 | Ga0495592_0001478 | 3300046454 | Bacteria | 16346 |
| 143 | Ga0495592_0082285 | 3300046454 | Bacteria | 2327 |
| 144 | Ga0495662_0025345 | 3300046476 | Unclassified | 2864 |
| 145 | Ga0495664_0056455 | 3300046477 | Unclassified | 2336 |
| 146 | Ga0495618_0008898 | 3300046514 | Bacteria | 6058 |
| 147 | Ga0495618_0067294 | 3300046514 | Bacteria | 2278 |
| 148 | Ga0495618_0101050 | 3300046514 | Unclassified | 1846 |
| 149 | Ga0495628_0000259 | 3300046516 | Bacteria | 47040 |
| 150 | Ga0495628_0150574 | 3300046516 | Bacteria | 1773 |
| 151 | Ga0495628_0366299 | 3300046516 | Unclassified | 1057 |
| 152 | Ga0495630_0000309 | 3300046517 | Bacteria | 39171 |
| 153 | Ga0495630_0003017 | 3300046517 | Bacteria | 11675 |
| 154 | Ga0495630_0039874 | 3300046517 | Bacteria | 3510 |
| 155 | Ga0495630_0086666 | 3300046517 | Unclassified | 2365 |
| 156 | Ga0495666_0005212 | 3300046526 | Bacteria | 6563 |
| 157 | Ga0495666_0032483 | 3300046526 | Bacteria | 2554 |
| 158 | Ga0495652_0037809 | 3300046529 | Bacteria | 4185 |
| 159 | Ga0495640_0011560 | 3300046533 | Bacteria | 6787 |
| 160 | Ga0495640_0242322 | 3300046533 | Unclassified | 1131 |
| 161 | Ga0495586_0000050 | 3300046535 | Bacteria | 70669 |
| 162 | Ga0495586_0009063 | 3300046535 | Bacteria | 5292 |
| 163 | Ga0495645_0009644 | 3300046543 | Bacteria | 6752 |
| 164 | Ga0495645_0312890 | 3300046543 | Unclassified | 1022 |
| 165 | Ga0495599_0009937 | 3300046678 | Bacteria | 5824 |
| 166 | Ga0495599_0058794 | 3300046678 | Unclassified | 2405 |
| 167 | Ga0495599_0073315 | 3300046678 | Unclassified | 2137 |
| 168 | Ga0495658_0003196 | 3300046683 | Bacteria | 8158 |
| 169 | Ga0495613_0168318 | 3300046689 | Unclassified | 1556 |
| 170 | Ga0495604_0079839 | 3300047317 | Unclassified | 2453 |
| 171 | Ga0495604_0242146 | 3300047317 | Bacteria | 1233 |
| 172 | Ga0495674_0004914 | 3300047319 | Bacteria | 12853 |
| 173 | Ga0495674_0019072 | 3300047319 | Bacteria | 6375 |
| 174 | Ga0495674_0133735 | 3300047319 | Unclassified | 2088 |
| 175 | Ga0495676_0023221 | 3300047321 | Bacteria | 5386 |
| 176 | Ga0495680_0148142 | 3300047322 | Bacteria | 1713 |
| 177 | Ga0495680_0271896 | 3300047322 | Unclassified | 1196 |
| 178 | Ga0495675_0026067 | 3300047444 | Bacteria | 3726 |
| 179 | Ga0495684_0296646 | 3300047471 | Unclassified | 1162 |
| 180 | Ga0496115_0007794 | 3300048918 | Bacteria | 7894 |
| 181 | Ga0501033_0078364 | 3300049570 | Bacteria | 2425 |
| 182 | nmdc:mga09592_124697_c1 | 3300050508 | Bacteria | 2213 |
| 183 | nmdc:mga08y16_13123_c1 | 3300050511 | Bacteria | 8716 |
| 184 | nmdc:mga08x19_94271_c1 | 3300050514 | Bacteria | 1979 |
| 185 | nmdc:mga0rr50_193177_c1 | |||
| 186 | rootH2_10289297 | |||
| 187 | rootH1_10264173 | |||
| 188 | Ga0070690_100097978 | |||
| 189 | Ga0070690_100300805 | |||
| 190 | Ga0070689_100014305 | |||
| 191 | Ga0070689_100025604 | |||
| 192 | Ga0070689_100044772 | |||
| 193 | Ga0070691_10083535 | |||
| 194 | Ga0070675_100108177 | |||
| 195 | Ga0070688_100011645 | |||
| 196 | Ga0070714_100002898 | |||
| 197 | Ga0070700_100067941 | |||
| 198 | Ga0070700_100417229 | |||
| 199 | Ga0070694_100010048 | |||
| 200 | Ga0070685_10044062 | |||
| 201 | Ga0070699_100413719 | |||
| 202 | Ga0070686_100002909 | |||
| 203 | Ga0070704_100012801 | |||
| 204 | Ga0068855_100051111 | |||
| 205 | Ga0068855_100342226 | |||
| 206 | Ga0068855_100637682 | |||
| 207 | Ga0068856_100497830 | |||
| 208 | Ga0068859_100020728 | |||
| 209 | Ga0068859_100117832 | |||
| 210 | Ga0068859_100128343 | |||
| 211 | Ga0068859_100272397 | |||
| 212 | Ga0068859_100388036 | |||
| 213 | Ga0068859_100392124 | |||
| 214 | Ga0068864_100077635 | |||
| 215 | Ga0068864_100346703 | |||
| 216 | Ga0068864_100570795 | |||
| 217 | Ga0068863_100513234 | |||
| 218 | Ga0068858_100132883 | |||
| 219 | Ga0097621_100015205 | |||
| 220 | Ga0075428_100001526 | |||
| 221 | Ga0075428_100221311 | |||
| 222 | Ga0075436_100122391 | |||
| 223 | Ga0097620_100020729 | |||
| 224 | Ga0097620_100117833 | |||
| 225 | Ga0097620_100128346 | |||
| 226 | Ga0097620_100272404 | |||
| 227 | Ga0097620_100388062 | |||
| 228 | Ga0097620_100392140 | |||
| 229 | Ga0099795_10091970 | |||
| 230 | Ga0105240_10001939 | |||
| 231 | Ga0105240_10109649 | |||
| 232 | Ga0105240_10524923 | |||
| 233 | Ga0111539_10107845 | |||
| 234 | Ga0111539_10133709 | |||
| 235 | Ga0111539_10252244 | |||
| 236 | Ga0114129_11137626 | |||
| 237 | Ga0105242_10301634 | |||
| 238 | Ga0105238_10003252 | |||
| 239 | Ga0105238_10063569 | |||
| 240 | Ga0105238_10093201 | |||
| 241 | Ga0105238_10334863 | |||
| 242 | Ga0105249_10247659 | |||
| 243 | Ga0157370_10091345 | |||
| 244 | Ga0157374_10323824 | |||
| 245 | Ga0163162_10098664 | |||
| 246 | Ga0163162_10390819 | |||
| 247 | Ga0163162_10780978 | |||
| 248 | Ga0157375_10000038 | |||
| 249 | Ga0157375_10481492 | |||
| 250 | Ga0163163_10000014 | |||
| 251 | Ga0157376_10173818 | |||
| 252 | Ga0157376_10339681 | |||
| 253 | Ga0207707_10076950 | |||
| 254 | Ga0207695_10008259 | |||
| 255 | Ga0207694_10055718 | |||
| 256 | Ga0207664_10011166 | |||
| 257 | Ga0207686_10268997 | |||
| 258 | Ga0207670_10044271 | |||
| 259 | Ga0207670_10045098 | |||
| 260 | Ga0207670_10093005 | |||
| 261 | Ga0207667_10183856 | |||
| 262 | Ga0207667_10255129 | |||
| 263 | Ga0207712_10352808 | |||
| 264 | Ga0207708_10343138 | |||
| 265 | Ga0207641_10217563 | |||
| 266 | Ga0207676_10581592 | |||
| 267 | Ga0207674_10048252 | |||
| 268 | Ga0207674_10501500 | |||
| 269 | Ga0207428_10098633 | |||
| 270 | Ga0265337_1007128 | |||
| 271 | Ga0265326_10007500 | |||
| 272 | Ga0265319_1000013 | |||
| 273 | Ga0265319_1029169 | |||
| 274 | Ga0265334_10009080 | |||
| 275 | Ga0265336_10039718 | |||
| 276 | Ga0265338_10000048 | |||
| 277 | Ga0265338_10000214 | |||
| 278 | Ga0265338_10001186 | |||
| 279 | Ga0265338_10001631 | |||
| 280 | Ga0265338_10002212 | |||
| 281 | Ga0265338_10002314 | |||
| 282 | Ga0265338_10002778 | |||
| 283 | Ga0265338_10007660 | |||
| 284 | Ga0265338_10008309 | |||
| 285 | Ga0265338_10008892 | |||
| 286 | Ga0265338_10054714 | |||
| 287 | Ga0265338_10065237 | |||
| 288 | Ga0265338_10067491 | |||
| 289 | Ga0265338_10088208 | |||
| 290 | Ga0265324_10000590 | |||
| 291 | Ga0265320_10007114 | |||
| 292 | Ga0265320_10040923 | |||
| 293 | Ga0265325_10016699 | |||
| 294 | Ga0265340_10103734 | |||
| 295 | Ga0265339_10002715 | |||
| 296 | Ga0265339_10007359 | |||
| 297 | Ga0265316_10000812 | |||
| 298 | Ga0265316_10165073 | |||
| 299 | Ga0265313_10001062 | |||
| 300 | Ga0265313_10004745 | |||
| 301 | Ga0265314_10006168 | |||
| 302 | Ga0265314_10137239 | |||
| 303 | Ga0265342_10053572 | |||
| 304 | Ga0373954_0127147 | |||
| 305 | Ga0373956_0015537 | |||
| 306 | Ga0373955_0242013 | |||
| 307 | Ga0373935_0045785 | |||
| 308 | Ga0373927_0012884 | |||
| 309 | Ga0373927_0139301 | |||
| 310 | Ga0373947_0009520 | |||
| 311 | Ga0373937_0402528 | |||
| 312 | Ga0373937_0492607 | |||
| 313 | Ga0373925_0008223 | |||
| 314 | Ga0373925_0019023 | |||
| 315 | Ga0451577_0002447 | |||
| 316 | Ga0451577_0102077 | |||
| 317 | Ga0451577_0308097 | |||
| 318 | Ga0453684_0001344 | |||
| 319 | Ga0453684_0009082 | |||
| 320 | Ga0453684_0014895 | |||
| 321 | Ga0453684_0519162 | |||
| 322 | Ga0451576_0167078 | |||
| 323 | Ga0451576_0260151 | |||
| 324 | Ga0451576_0275428 | |||
| 325 | Ga0451576_0613838 | |||
| 326 | Ga0495592_0001478 | |||
| 327 | Ga0495592_0082285 | |||
| 328 | Ga0495662_0025345 | |||
| 329 | Ga0495664_0056455 | |||
| 330 | Ga0495618_0008898 | |||
| 331 | Ga0495618_0067294 | |||
| 332 | Ga0495618_0101050 | |||
| 333 | Ga0495628_0000259 | |||
| 334 | Ga0495628_0150574 | |||
| 335 | Ga0495628_0366299 | |||
| 336 | Ga0495630_0000309 | |||
| 337 | Ga0495630_0003017 | |||
| 338 | Ga0495630_0039874 | |||
| 339 | Ga0495630_0086666 | |||
| 340 | Ga0495666_0005212 | |||
| 341 | Ga0495666_0032483 | |||
| 342 | Ga0495652_0037809 | |||
| 343 | Ga0495640_0011560 | |||
| 344 | Ga0495640_0242322 | |||
| 345 | Ga0495586_0000050 | |||
| 346 | Ga0495586_0009063 | |||
| 347 | Ga0495645_0009644 | |||
| 348 | Ga0495645_0312890 | |||
| 349 | Ga0495599_0009937 | |||
| 350 | Ga0495599_0058794 | |||
| 351 | Ga0495599_0073315 | |||
| 352 | Ga0495658_0003196 | |||
| 353 | Ga0495613_0168318 | |||
| 354 | Ga0495604_0079839 | |||
| 355 | Ga0495604_0242146 | |||
| 356 | Ga0495674_0004914 | |||
| 357 | Ga0495674_0019072 | |||
| 358 | Ga0495674_0133735 | |||
| 359 | Ga0495676_0023221 | |||
| 360 | Ga0495680_0148142 | |||
| 361 | Ga0495680_0271896 | |||
| 362 | Ga0495675_0026067 | |||
| 363 | Ga0495684_0296646 | |||
| 364 | Ga0496115_0007794 | |||
| 365 | Ga0501033_0078364 | |||
| 366 | nmdc:mga09592_124697_c1 | |||
| 367 | nmdc:mga08y16_13123_c1 | |||
| 368 | nmdc:mga08x19_94271_c1 |
Family Sequences
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3o66-assembly2.cif.gz_B | crystal structure of glycine betaine/carnitine/choline abc transporter | 0.7595 | 9 | 50 |
| 3ppr-assembly2.cif.gz_B | structures of the substrate-binding protein provide insights into the multiple compatible solutes binding specificities of bacillus subtilis abc transporter opuc | 0.7543 | 9 | 50 |
| 6eyq-assembly2.cif.gz_B | crystal structure of a mutated opubc in complex with choline | 0.7149 | 9 | 50 |
| 6eyq-assembly1.cif.gz_A | crystal structure of a mutated opubc in complex with choline | 0.7139 | 9 | 50 |
| 4zn2-assembly3.cif.gz_C | glycosyl hydrolase from pseudomonas aeruginosa | 0.7126 | 226 | 248 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6HFN8_137_214_3.10.310.30 | Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; | 0.8036 | 230 | 274 | 3.10.310.30 |
| af_Q9LXC3_34_289_3.90.1640.10 | Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) | 0.7532 | 6 | 150 | 3.90.1640.10 |
| af_Q9USX1_467_555_2.60.40.1910 | Mainly Beta;Sandwich;Immunoglobulin-like; | 0.7284 | 228 | 251 | 2.60.40.1910 |
| af_Q2FVH0_34_306_3.40.190.10 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.7225 | 9 | 50 | 3.40.190.10 |
| 4nn5C02 | Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins | 0.721 | 230 | 248 | 2.60.40.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3D5JWH7-F1-model_v4 | Phosphoesterase | 0.9892 | 1 | 269 |
|
| AF-A0A2V5XN32-F1-model_v4 | Phosphoesterase | 0.9855 | 1 | 224 |
|
| AF-A0A3D5JWH7-F1-model_v4 | Phosphoesterase | 0.982 | 1 | 269 |
|
| AF-A0A2V5XN32-F1-model_v4 | Phosphoesterase | 0.9769 | 1 | 224 |
|
| AF-A0A350HZI7-F1-model_v4 | Phosphoesterase | 0.9752 | 1 | 89 |
|