F282633
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 145 | 174 | 294 |
Family's Representative Sequence
| Representative Sequence | 3300025256|Ga0209759_1023026|Ga0209759_10230261 |
| Length | 328 |
| Sequence | LLRRFKPQHSVLTHQVTLLNRLLTLSYSKLATDTGGKIVATLKYVKHERILLKNHIDLDERWLQDRIGEDPSILGLGDLVLKDRERIQPRAGRLDLLLQDAETNKRFEVEVQLGKTDEAHIIRTIEYWDIERKRYPQYDHTAVIVAEDITSRFLNVISLFNGSIPLVAIQLNAIKLGDSISLVCSKVLDELQLGLVDEDEEVQAVTDRAYWEARASKSTLAMADEMLRELRTLDADLELKYNKFYIGLAKGGQPNNFVIFRPKKDWLRLEVRLDRSDETQSDLNSSGLDVMDYDSRWGCYRIRLAQGDVAKHRDFLRSLMGKAFAEAS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886006 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 2508501123 | Mesorhizobium sp. WSM3626 | Isolate | Nodule |
| 4 | 2721755755 | Bradyrhizobium icense LMTR 13 | Isolate | Nodule |
| 5 | 2874590934 | Bradyrhizobium canariense UBMA181 | Isolate | Nodule |
| 6 | 2876771140 | Bradyrhizobium canariense UBMA192 | Isolate | Nodule |
| 7 | 2876818435 | Bradyrhizobium canariense UBMA195 | Isolate | Nodule |
| 8 | 2879074833 | Bradyrhizobium canariense UBMA171 | Isolate | Nodule |
| 9 | 2915980308 | Sinorhizobium medicae USDA1149 | Isolate | Nodule |
| 10 | 2960680706 | Sinorhizobium medicae USDA1150 | Isolate | Nodule |
| 11 | 2964691889 | Sinorhizobium meliloti USDA1379 | Isolate | Nodule |
| 12 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 13 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 14 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 15 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 16 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 17 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 18 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 19 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 20 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 21 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 24 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 33 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 36 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 37 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 38 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 39 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 40 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 41 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 42 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 43 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 44 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 45 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 46 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 47 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 48 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 49 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 50 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 51 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 52 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 53 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 54 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 56 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 57 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 64 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 65 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 66 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 67 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 68 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 73 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 74 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 75 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 76 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 77 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 79 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 81 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 107 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 108 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 109 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 110 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 111 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 112 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 113 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 114 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 115 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 116 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 117 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 118 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 119 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 120 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 121 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 122 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 123 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 124 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 125 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 126 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 129 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 130 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 131 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 132 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 133 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 135 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 136 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 137 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 138 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 143 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 144 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 145 | 8019629233 | Bradyrhizobium sp. GM6.1 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.57 |
| Metatranscriptomes | 0 |
| Isolates | 5.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.24 |
| Nodule | 5.43 |
| Rhizoplane | 1.09 |
| Rhizosphere | 79.89 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.35 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL3b_contig_2816702 | 2162886006 | Bacteria | 2249 |
| 2 | SwRhRL2b_contig_873095 | 2162886007 | Bacteria | 2670 |
| 3 | JGI24741J21665_1008066 | 3300001915 | Bacteria | 2005 |
| 4 | JGI24740J21852_10019944 | 3300001979 | Bacteria | 2351 |
| 5 | JGI24737J22298_10000693 | 3300001990 | Bacteria | 11841 |
| 6 | JGI25156J39149_1011191 | 3300002705 | Bacteria | 2048 |
| 7 | JGI25157J39369_1008892 | 3300002741 | Bacteria | 1374 |
| 8 | JGI25404J52841_10021706 | 3300003659 | Bacteria | 1390 |
| 9 | Ga0065165_1017881 | 3300005262 | Bacteria | 2592 |
| 10 | Ga0065704_10071588 | 3300005289 | Bacteria | 10604 |
| 11 | Ga0065707_10002017 | 3300005295 | Bacteria | 8351 |
| 12 | Ga0070658_10002990 | 3300005327 | Bacteria | 13996 |
| 13 | Ga0070660_100002526 | 3300005339 | Bacteria | 12533 |
| 14 | Ga0070660_100035536 | 3300005339 | Bacteria | 3772 |
| 15 | Ga0070689_100066349 | 3300005340 | Bacteria | 2811 |
| 16 | Ga0070659_100008434 | 3300005366 | Bacteria | 7528 |
| 17 | Ga0070713_100061172 | 3300005436 | Unclassified | 3150 |
| 18 | Ga0070701_10101401 | 3300005438 | Bacteria | 1595 |
| 19 | Ga0070700_100064743 | 3300005441 | Bacteria | 2316 |
| 20 | Ga0070663_100086300 | 3300005455 | Bacteria | 2317 |
| 21 | Ga0070707_100001315 | 3300005468 | Bacteria | 24451 |
| 22 | Ga0070707_100004786 | 3300005468 | Bacteria | 12669 |
| 23 | Ga0070698_100026834 | 3300005471 | Bacteria | 5991 |
| 24 | Ga0070698_100075728 | 3300005471 | Bacteria | 3369 |
| 25 | Ga0070699_100022013 | 3300005518 | Bacteria | 5491 |
| 26 | Ga0070699_100309327 | 3300005518 | Bacteria | 1418 |
| 27 | Ga0068853_100243616 | 3300005539 | Bacteria | 1648 |
| 28 | Ga0068853_100509145 | 3300005539 | Bacteria | 1137 |
| 29 | Ga0070693_100089094 | 3300005547 | Unclassified | 1857 |
| 30 | Ga0070665_100000440 | 3300005548 | Bacteria | 60649 |
| 31 | Ga0070704_100062308 | 3300005549 | Bacteria | 2673 |
| 32 | Ga0068855_100339604 | 3300005563 | Bacteria | 1656 |
| 33 | Ga0070664_100188526 | 3300005564 | Bacteria | 1837 |
| 34 | Ga0068857_100085484 | 3300005577 | Bacteria | 2819 |
| 35 | Ga0068854_100035398 | 3300005578 | Bacteria | 3494 |
| 36 | Ga0068856_100134361 | 3300005614 | Bacteria | 2479 |
| 37 | Ga0068852_100281524 | 3300005616 | Bacteria | 1603 |
| 38 | Ga0068859_100011084 | 3300005617 | Bacteria | 9071 |
| 39 | Ga0068859_100189006 | 3300005617 | Bacteria | 2144 |
| 40 | Ga0068859_100225923 | 3300005617 | Bacteria | 1960 |
| 41 | Ga0068864_100203905 | 3300005618 | Bacteria | 1818 |
| 42 | Ga0068851_10040773 | 3300005834 | Bacteria | 2334 |
| 43 | Ga0068870_10036292 | 3300005840 | Unclassified | 2535 |
| 44 | Ga0068862_100139422 | 3300005844 | Bacteria | 2151 |
| 45 | Ga0068862_100208425 | 3300005844 | Bacteria | 1765 |
| 46 | Ga0081540_1061743 | 3300005983 | Bacteria | 1785 |
| 47 | Ga0070717_10052049 | 3300006028 | Bacteria | 3372 |
| 48 | Ga0070717_10322209 | 3300006028 | Unclassified | 1377 |
| 49 | Ga0075368_10046839 | 3300006042 | Bacteria | 1711 |
| 50 | Ga0075363_100000557 | 3300006048 | Bacteria | 12157 |
| 51 | Ga0070712_100317519 | 3300006175 | Bacteria | 1266 |
| 52 | Ga0075367_10022336 | 3300006178 | Bacteria | 3547 |
| 53 | Ga0075366_10004400 | 3300006195 | Bacteria | 7561 |
| 54 | Ga0097621_100182200 | 3300006237 | Bacteria | 1815 |
| 55 | Ga0075370_10073661 | 3300006353 | Bacteria | 1956 |
| 56 | Ga0075428_100424657 | 3300006844 | Bacteria | 1424 |
| 57 | Ga0075428_100760720 | 3300006844 | Unclassified | 1031 |
| 58 | Ga0097620_100011083 | 3300006931 | Bacteria | 9071 |
| 59 | Ga0097620_100189007 | 3300006931 | Bacteria | 2144 |
| 60 | Ga0097620_100225930 | 3300006931 | Bacteria | 1960 |
| 61 | Ga0105240_10374406 | 3300009093 | Bacteria | 1609 |
| 62 | Ga0111539_10049098 | 3300009094 | Bacteria | 5035 |
| 63 | Ga0111539_10057697 | 3300009094 | Bacteria | 4609 |
| 64 | Ga0111539_10121263 | 3300009094 | Unclassified | 3064 |
| 65 | Ga0105247_10066402 | 3300009101 | Bacteria | 2246 |
| 66 | Ga0105247_10198983 | 3300009101 | Bacteria | 1345 |
| 67 | Ga0114129_10036242 | 3300009147 | Bacteria | 6966 |
| 68 | Ga0114129_10365981 | 3300009147 | Bacteria | 1907 |
| 69 | Ga0105241_10085037 | 3300009174 | Bacteria | 2485 |
| 70 | Ga0105241_10180025 | 3300009174 | Bacteria | 1753 |
| 71 | Ga0105248_10200669 | 3300009177 | Bacteria | 2247 |
| 72 | Ga0105248_10314755 | 3300009177 | Bacteria | 1763 |
| 73 | Ga0105237_10010672 | 3300009545 | Bacteria | 9753 |
| 74 | Ga0105237_10030347 | 3300009545 | Bacteria | 5491 |
| 75 | Ga0105237_10440194 | 3300009545 | Bacteria | 1309 |
| 76 | Ga0105238_10300239 | 3300009551 | Bacteria | 1589 |
| 77 | Ga0099796_10013234 | 3300010159 | Bacteria | 2351 |
| 78 | Ga0105239_10217380 | 3300010375 | Bacteria | 2143 |
| 79 | Ga0105239_10352860 | 3300010375 | Bacteria | 1661 |
| 80 | Ga0157373_10101984 | 3300013100 | Bacteria | 2019 |
| 81 | Ga0157373_10180386 | 3300013100 | Bacteria | 1487 |
| 82 | Ga0157371_10000197 | 3300013102 | Bacteria | 88423 |
| 83 | Ga0157370_10244230 | 3300013104 | Bacteria | 1661 |
| 84 | Ga0157369_10259401 | 3300013105 | Bacteria | 1813 |
| 85 | Ga0163162_10009845 | 3300013306 | Bacteria | 9298 |
| 86 | Ga0163162_10383434 | 3300013306 | Bacteria | 1539 |
| 87 | Ga0157375_10344691 | 3300013308 | Bacteria | 1655 |
| 88 | Ga0209646_1001869 | 3300025246 | Bacteria | 5178 |
| 89 | Ga0209026_1000079 | 3300025250 | Bacteria | 198355 |
| 90 | Ga0209759_1023026 | 3300025256 | Bacteria | 1381 |
| 91 | Ga0209130_1003867 | 3300025284 | Bacteria | 6035 |
| 92 | Ga0209564_1039680 | 3300025295 | Bacteria | 1290 |
| 93 | Ga0209758_1023390 | 3300025297 | Bacteria | 2796 |
| 94 | Ga0207426_1000690 | 3300025302 | Bacteria | 40578 |
| 95 | Ga0207656_10008213 | 3300025321 | Bacteria | 3831 |
| 96 | Ga0207710_10001450 | 3300025900 | Bacteria | 11794 |
| 97 | Ga0207710_10115344 | 3300025900 | Bacteria | 1278 |
| 98 | Ga0207705_10000453 | 3300025909 | Bacteria | 35260 |
| 99 | Ga0207684_10009988 | 3300025910 | Bacteria | 8368 |
| 100 | Ga0207654_10000926 | 3300025911 | Bacteria | 16210 |
| 101 | Ga0207671_10018463 | 3300025914 | Bacteria | 5351 |
| 102 | Ga0207671_10022302 | 3300025914 | Bacteria | 4788 |
| 103 | Ga0207671_10180475 | 3300025914 | Bacteria | 1643 |
| 104 | Ga0207693_10253071 | 3300025915 | Bacteria | 1382 |
| 105 | Ga0207693_10438414 | 3300025915 | Bacteria | 1021 |
| 106 | Ga0207663_10276600 | 3300025916 | Bacteria | 1246 |
| 107 | Ga0207657_10006136 | 3300025919 | Bacteria | 12491 |
| 108 | Ga0207657_10009851 | 3300025919 | Bacteria | 9569 |
| 109 | Ga0207646_10000653 | 3300025922 | Bacteria | 44777 |
| 110 | Ga0207646_10004922 | 3300025922 | Bacteria | 14286 |
| 111 | Ga0207694_10142092 | 3300025924 | Bacteria | 1931 |
| 112 | Ga0207690_10002426 | 3300025932 | Bacteria | 11279 |
| 113 | Ga0207670_10304498 | 3300025936 | Bacteria | 1249 |
| 114 | Ga0207711_10245989 | 3300025941 | Bacteria | 1641 |
| 115 | Ga0207679_10314949 | 3300025945 | Bacteria | 1353 |
| 116 | Ga0207667_10047887 | 3300025949 | Bacteria | 4522 |
| 117 | Ga0207668_10099827 | 3300025972 | Bacteria | 2154 |
| 118 | Ga0207640_10000856 | 3300025981 | Bacteria | 17266 |
| 119 | Ga0207639_10216499 | 3300026041 | Bacteria | 1652 |
| 120 | Ga0207678_10099525 | 3300026067 | Bacteria | 2484 |
| 121 | Ga0207702_10137517 | 3300026078 | Bacteria | 2206 |
| 122 | Ga0207674_10424594 | 3300026116 | Bacteria | 1285 |
| 123 | Ga0207698_10015611 | 3300026142 | Bacteria | 5091 |
| 124 | Ga0268266_10000511 | 3300028379 | Bacteria | 54689 |
| 125 | Ga0268265_10181992 | 3300028380 | Bacteria | 1806 |
| 126 | Ga0268265_10325398 | 3300028380 | Bacteria | 1394 |
| 127 | Ga0265323_10047912 | 3300028653 | Unclassified | 1527 |
| 128 | Ga0265330_10006378 | 3300031235 | Bacteria | 5827 |
| 129 | Ga0265332_10000230 | 3300031238 | Bacteria | 44762 |
| 130 | Ga0265320_10001183 | 3300031240 | Bacteria | 19207 |
| 131 | Ga0265325_10000310 | 3300031241 | Bacteria | 34255 |
| 132 | Ga0265339_10004158 | 3300031249 | Bacteria | 9945 |
| 133 | Ga0265316_10001151 | 3300031344 | Bacteria | 28669 |
| 134 | Ga0265316_10008114 | 3300031344 | Bacteria | 9783 |
| 135 | Ga0265316_10174603 | 3300031344 | Bacteria | 1602 |
| 136 | Ga0307408_100001098 | 3300031548 | Bacteria | 20644 |
| 137 | Ga0265314_10000525 | 3300031711 | Bacteria | 49392 |
| 138 | Ga0265342_10000965 | 3300031712 | Bacteria | 28554 |
| 139 | Ga0265342_10132082 | 3300031712 | Unclassified | 1398 |
| 140 | Ga0307406_10002654 | 3300031901 | Bacteria | 9745 |
| 141 | Ga0373945_0119452 | 3300035116 | Unclassified | 1047 |
| 142 | Ga0373924_0050813 | 3300035410 | Unclassified | 1718 |
| 143 | Ga0373933_0147747 | 3300035724 | Unclassified | 1487 |
| 144 | Ga0373925_0074568 | 3300037068 | Bacteria | 2570 |
| 145 | Ga0451577_0379476 | 3300042876 | Bacteria | 1283 |
| 146 | Ga0466969_0000556 | 3300044656 | Bacteria | 20505 |
| 147 | Ga0453684_0060649 | 3300044712 | Bacteria | 4861 |
| 148 | Ga0453684_0092747 | 3300044712 | Unclassified | 3722 |
| 149 | Ga0453684_0174820 | 3300044712 | Unclassified | 2527 |
| 150 | Ga0451576_0313178 | 3300045051 | Bacteria | 1642 |
| 151 | Ga0466967_0019426 | 3300045976 | Bacteria | 5462 |
| 152 | Ga0495586_0004814 | 3300046535 | Bacteria | 7215 |
| 153 | Ga0495681_0000025 | 3300047470 | Bacteria | 148216 |
| 154 | Ga0496104_0000017 | 3300048907 | Bacteria | 325877 |
| 155 | Ga0496105_0000009 | 3300048908 | Bacteria | 325734 |
| 156 | Ga0496122_0126780 | 3300048925 | Bacteria | 1632 |
| 157 | Ga0496125_0001253 | 3300048928 | Bacteria | 37864 |
| 158 | Ga0496126_0002860 | 3300048929 | Bacteria | 22563 |
| 159 | Ga0501034_0034568 | 3300049571 | Bacteria | 5124 |
| 160 | nmdc:mga03n38_283_c1 | 3300050490 | Bacteria | 12078 |
| 161 | nmdc:mga0k408_1987_c1 | 3300050493 | Bacteria | 10974 |
| 162 | nmdc:mga06z11_14192_c1 | 3300050494 | Bacteria | 3523 |
| 163 | nmdc:mga04h51_32980_c1 | 3300050495 | Bacteria | 1646 |
| 164 | nmdc:mga05p37_171181_c1 | 3300050507 | Bacteria | 2648 |
| 165 | nmdc:mga05p37_43842_c1 | 3300050507 | Bacteria | 2952 |
| 166 | nmdc:mga09592_128533_c1 | 3300050508 | Bacteria | 2179 |
| 167 | nmdc:mga09592_16583_c1 | 3300050508 | Bacteria | 6028 |
| 168 | nmdc:mga08y16_197813_c1 | 3300050511 | Unclassified | 2083 |
| 169 | nmdc:mga08y16_236158_c1 | 3300050511 | Unclassified | 1890 |
| 170 | nmdc:mga0a205_289244_c1 | 3300050515 | Bacteria | 1513 |
| 171 | nmdc:mga0a205_477215_c1 | 3300050515 | Bacteria | 1105 |
| 172 | Ga0500646_0035060 | 3300053090 | Bacteria | 1393 |
| 173 | Ga0500641_0059319 | 3300053096 | Bacteria | 1591 |
| 174 | Ga0500658_0000043 | 3300053134 | Bacteria | 73664 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005339 | Ga0070660_100002526 | Ga0070660_1000025267 | 256 |
| 2 | 3300050495 | nmdc:mga04h51_32980_c1 | nmdc:mga04h51_32980_c1_804_1628 | 271 |
| 3 | 3300031238 | Ga0265332_10000230 | Ga0265332_1000023031 | 275 |
| 4 | 3300025295 | Ga0209564_1039680 | Ga0209564_10396801 | 278 |
| 5 | 3300048925 | Ga0496122_0126780 | Ga0496122_0126780_326_1171 | 278 |
| 6 | iso_pu_bacteria | 2721755755 | 2723849004 | 279 |
| 7 | 3300044712 | Ga0453684_0174820 | Ga0453684_0174820_1059_1916 | 280 |
| 8 | 3300009094 | Ga0111539_10049098 | Ga0111539_100490982 | 281 |
| 9 | 3300035116 | Ga0373945_0119452 | Ga0373945_0119452_16_912 | 281 |
| 10 | 3300042876 | Ga0451577_0379476 | Ga0451577_0379476_111_968 | 281 |
| 11 | 3300044712 | Ga0453684_0092747 | Ga0453684_0092747_1767_2624 | 281 |
| 12 | 3300050511 | nmdc:mga08y16_197813_c1 | nmdc:mga08y16_197813_c1_415_1263 | 281 |
| 13 | 3300053090 | Ga0500646_0035060 | Ga0500646_0035060_476_1342 | 281 |
| 14 | 3300053134 | Ga0500658_0000043 | Ga0500658_0000043_10692_11558 | 281 |
| 15 | iso_pu_bacteria | 2874590934 | 2874593732 | 282 |
| 16 | iso_pu_bacteria | 2876771140 | 2876772823 | 282 |
| 17 | iso_pu_bacteria | 2876818435 | 2876826448 | 282 |
| 18 | iso_pu_bacteria | 2879074833 | 2879077519 | 282 |
| 19 | iso_pu_bacteria | 8019629233 | 8019630699 | 282 |
| 20 | iso_pu_bacteria | 2915980308 | 2915984270 | 283 |
| 21 | iso_pu_bacteria | 2960680706 | 2960683502 | 283 |
| 22 | iso_pu_bacteria | 2964691889 | 2964693638 | 283 |
| 23 | 3300006175 | Ga0070712_100317519 | Ga0070712_1003175191 | 284 |
| 24 | 3300025915 | Ga0207693_10253071 | Ga0207693_102530711 | 284 |
| 25 | 3300025915 | Ga0207693_10438414 | Ga0207693_104384141 | 284 |
| 26 | 3300025916 | Ga0207663_10276600 | Ga0207663_102766002 | 284 |
| 27 | 3300035410 | Ga0373924_0050813 | Ga0373924_0050813_793_1653 | 284 |
| 28 | 3300050515 | nmdc:mga0a205_289244_c1 | nmdc:mga0a205_289244_c1_71_925 | 284 |
| 29 | 3300050515 | nmdc:mga0a205_477215_c1 | nmdc:mga0a205_477215_c1_26_880 | 284 |
| 30 | iso_pu_bacteria | 2508501123 | 2509114585 | 284 |
| 31 | 3300005547 | Ga0070693_100089094 | Ga0070693_1000890941 | 285 |
| 32 | 3300005548 | Ga0070665_100000440 | Ga0070665_1000004406 | 285 |
| 33 | 3300005840 | Ga0068870_10036292 | Ga0068870_100362922 | 285 |
| 34 | 3300028379 | Ga0268266_10000511 | Ga0268266_1000051115 | 285 |
| 35 | 3300005471 | Ga0070698_100026834 | Ga0070698_1000268343 | 286 |
| 36 | 3300005518 | Ga0070699_100309327 | Ga0070699_1003093272 | 286 |
| 37 | 3300025246 | Ga0209646_1001869 | Ga0209646_10018693 | 286 |
| 38 | 3300031548 | Ga0307408_100001098 | Ga0307408_10000109812 | 286 |
| 39 | 3300031901 | Ga0307406_10002654 | Ga0307406_100026543 | 286 |
| 40 | 3300003659 | JGI25404J52841_10021706 | JGI25404J52841_100217062 | 287 |
| 41 | 3300005262 | Ga0065165_1017881 | Ga0065165_10178812 | 287 |
| 42 | 3300005844 | Ga0068862_100139422 | Ga0068862_1001394224 | 287 |
| 43 | 3300005983 | Ga0081540_1061743 | Ga0081540_10617432 | 287 |
| 44 | 3300006042 | Ga0075368_10046839 | Ga0075368_100468391 | 287 |
| 45 | 3300006048 | Ga0075363_100000557 | Ga0075363_10000055714 | 287 |
| 46 | 3300006178 | Ga0075367_10022336 | Ga0075367_100223362 | 287 |
| 47 | 3300006195 | Ga0075366_10004400 | Ga0075366_100044007 | 287 |
| 48 | 3300006353 | Ga0075370_10073661 | Ga0075370_100736612 | 287 |
| 49 | 3300025284 | Ga0209130_1003867 | Ga0209130_10038673 | 287 |
| 50 | 3300025297 | Ga0209758_1023390 | Ga0209758_10233903 | 287 |
| 51 | 3300025302 | Ga0207426_1000690 | Ga0207426_100069038 | 287 |
| 52 | 3300025972 | Ga0207668_10099827 | Ga0207668_100998272 | 287 |
| 53 | 3300028380 | Ga0268265_10325398 | Ga0268265_103253982 | 287 |
| 54 | 3300028653 | Ga0265323_10047912 | Ga0265323_100479121 | 287 |
| 55 | 3300031240 | Ga0265320_10001183 | Ga0265320_1000118319 | 287 |
| 56 | 3300031344 | Ga0265316_10008114 | Ga0265316_100081146 | 287 |
| 57 | 3300031712 | Ga0265342_10132082 | Ga0265342_101320822 | 287 |
| 58 | 3300046535 | Ga0495586_0004814 | Ga0495586_0004814_1955_2821 | 287 |
| 59 | 3300049571 | Ga0501034_0034568 | Ga0501034_0034568_3061_3930 | 287 |
| 60 | 3300050490 | nmdc:mga03n38_283_c1 | nmdc:mga03n38_283_c1_1994_2866 | 287 |
| 61 | 3300050493 | nmdc:mga0k408_1987_c1 | nmdc:mga0k408_1987_c1_7673_8545 | 287 |
| 62 | 3300050494 | nmdc:mga06z11_14192_c1 | nmdc:mga06z11_14192_c1_2290_3162 | 287 |
| 63 | 3300005617 | Ga0068859_100011084 | Ga0068859_1000110846 | 288 |
| 64 | 3300006931 | Ga0097620_100011083 | Ga0097620_1000110836 | 288 |
| 65 | 3300009101 | Ga0105247_10066402 | Ga0105247_100664024 | 288 |
| 66 | 3300009545 | Ga0105237_10030347 | Ga0105237_100303475 | 288 |
| 67 | 3300025900 | Ga0207710_10115344 | Ga0207710_101153441 | 288 |
| 68 | 3300025914 | Ga0207671_10022302 | Ga0207671_100223023 | 288 |
| 69 | 3300031344 | Ga0265316_10174603 | Ga0265316_101746032 | 288 |
| 70 | 3300044656 | Ga0466969_0000556 | Ga0466969_0000556_10024_10899 | 288 |
| 71 | 3300002705 | JGI25156J39149_1011191 | JGI25156J39149_10111912 | 289 |
| 72 | 3300002741 | JGI25157J39369_1008892 | JGI25157J39369_10088922 | 289 |
| 73 | 3300005327 | Ga0070658_10002990 | Ga0070658_1000299012 | 289 |
| 74 | 3300005468 | Ga0070707_100001315 | Ga0070707_10000131515 | 289 |
| 75 | 3300006237 | Ga0097621_100182200 | Ga0097621_1001822002 | 289 |
| 76 | 3300009094 | Ga0111539_10121263 | Ga0111539_101212632 | 289 |
| 77 | 3300009545 | Ga0105237_10010672 | Ga0105237_1001067210 | 289 |
| 78 | 3300010159 | Ga0099796_10013234 | Ga0099796_100132343 | 289 |
| 79 | 3300013306 | Ga0163162_10009845 | Ga0163162_100098459 | 289 |
| 80 | 3300013306 | Ga0163162_10383434 | Ga0163162_103834342 | 289 |
| 81 | 3300013308 | Ga0157375_10344691 | Ga0157375_103446912 | 289 |
| 82 | 3300025250 | Ga0209026_1000079 | Ga0209026_10000791 | 289 |
| 83 | 3300025909 | Ga0207705_10000453 | Ga0207705_1000045313 | 289 |
| 84 | 3300025914 | Ga0207671_10018463 | Ga0207671_100184631 | 289 |
| 85 | 3300025919 | Ga0207657_10006136 | Ga0207657_100061367 | 289 |
| 86 | 3300025922 | Ga0207646_10000653 | Ga0207646_100006535 | 289 |
| 87 | 3300031711 | Ga0265314_10000525 | Ga0265314_100005257 | 289 |
| 88 | 3300044712 | Ga0453684_0060649 | Ga0453684_0060649_1337_2209 | 289 |
| 89 | 3300047470 | Ga0495681_0000025 | Ga0495681_0000025_77821_78696 | 289 |
| 90 | 3300050511 | nmdc:mga08y16_236158_c1 | nmdc:mga08y16_236158_c1_934_1806 | 289 |
| 91 | 3300001915 | JGI24741J21665_1008066 | JGI24741J21665_10080662 | 290 |
| 92 | 3300001979 | JGI24740J21852_10019944 | JGI24740J21852_100199443 | 290 |
| 93 | 3300001990 | JGI24737J22298_10000693 | JGI24737J22298_100006933 | 290 |
| 94 | 3300005339 | Ga0070660_100035536 | Ga0070660_1000355362 | 290 |
| 95 | 3300005366 | Ga0070659_100008434 | Ga0070659_10000843410 | 290 |
| 96 | 3300005436 | Ga0070713_100061172 | Ga0070713_1000611723 | 290 |
| 97 | 3300005455 | Ga0070663_100086300 | Ga0070663_1000863003 | 290 |
| 98 | 3300005539 | Ga0068853_100243616 | Ga0068853_1002436161 | 290 |
| 99 | 3300005563 | Ga0068855_100339604 | Ga0068855_1003396041 | 290 |
| 100 | 3300005564 | Ga0070664_100188526 | Ga0070664_1001885262 | 290 |
| 101 | 3300005577 | Ga0068857_100085484 | Ga0068857_1000854842 | 290 |
| 102 | 3300005578 | Ga0068854_100035398 | Ga0068854_1000353984 | 290 |
| 103 | 3300005614 | Ga0068856_100134361 | Ga0068856_1001343613 | 290 |
| 104 | 3300005616 | Ga0068852_100281524 | Ga0068852_1002815241 | 290 |
| 105 | 3300005834 | Ga0068851_10040773 | Ga0068851_100407732 | 290 |
| 106 | 3300009093 | Ga0105240_10374406 | Ga0105240_103744062 | 290 |
| 107 | 3300009174 | Ga0105241_10085037 | Ga0105241_100850372 | 290 |
| 108 | 3300009177 | Ga0105248_10200669 | Ga0105248_102006692 | 290 |
| 109 | 3300009545 | Ga0105237_10440194 | Ga0105237_104401941 | 290 |
| 110 | 3300009551 | Ga0105238_10300239 | Ga0105238_103002391 | 290 |
| 111 | 3300010375 | Ga0105239_10352860 | Ga0105239_103528602 | 290 |
| 112 | 3300013100 | Ga0157373_10101984 | Ga0157373_101019842 | 290 |
| 113 | 3300013102 | Ga0157371_10000197 | Ga0157371_100001975 | 290 |
| 114 | 3300013104 | Ga0157370_10244230 | Ga0157370_102442302 | 290 |
| 115 | 3300013105 | Ga0157369_10259401 | Ga0157369_102594012 | 290 |
| 116 | 3300025321 | Ga0207656_10008213 | Ga0207656_100082132 | 290 |
| 117 | 3300025911 | Ga0207654_10000926 | Ga0207654_100009263 | 290 |
| 118 | 3300025914 | Ga0207671_10180475 | Ga0207671_101804752 | 290 |
| 119 | 3300025919 | Ga0207657_10009851 | Ga0207657_100098512 | 290 |
| 120 | 3300025924 | Ga0207694_10142092 | Ga0207694_101420922 | 290 |
| 121 | 3300025932 | Ga0207690_10002426 | Ga0207690_1000242611 | 290 |
| 122 | 3300025941 | Ga0207711_10245989 | Ga0207711_102459892 | 290 |
| 123 | 3300025945 | Ga0207679_10314949 | Ga0207679_103149491 | 290 |
| 124 | 3300025949 | Ga0207667_10047887 | Ga0207667_100478874 | 290 |
| 125 | 3300025981 | Ga0207640_10000856 | Ga0207640_1000085610 | 290 |
| 126 | 3300026041 | Ga0207639_10216499 | Ga0207639_102164992 | 290 |
| 127 | 3300026067 | Ga0207678_10099525 | Ga0207678_100995252 | 290 |
| 128 | 3300026078 | Ga0207702_10137517 | Ga0207702_101375173 | 290 |
| 129 | 3300026116 | Ga0207674_10424594 | Ga0207674_104245942 | 290 |
| 130 | 3300026142 | Ga0207698_10015611 | Ga0207698_100156111 | 290 |
| 131 | 3300031235 | Ga0265330_10006378 | Ga0265330_100063783 | 290 |
| 132 | 3300031241 | Ga0265325_10000310 | Ga0265325_100003103 | 290 |
| 133 | 3300031249 | Ga0265339_10004158 | Ga0265339_100041582 | 290 |
| 134 | 3300031344 | Ga0265316_10001151 | Ga0265316_1000115122 | 290 |
| 135 | 3300031712 | Ga0265342_10000965 | Ga0265342_1000096529 | 290 |
| 136 | 3300045976 | Ga0466967_0019426 | Ga0466967_0019426_3168_4046 | 290 |
| 137 | 3300048907 | Ga0496104_0000017 | Ga0496104_0000017_52711_53586 | 290 |
| 138 | 3300048908 | Ga0496105_0000009 | Ga0496105_0000009_179347_180222 | 290 |
| 139 | 3300053096 | Ga0500641_0059319 | Ga0500641_0059319_186_1064 | 290 |
| 140 | 3300009101 | Ga0105247_10198983 | Ga0105247_101989831 | 291 |
| 141 | 3300009174 | Ga0105241_10180025 | Ga0105241_101800251 | 291 |
| 142 | 3300009177 | Ga0105248_10314755 | Ga0105248_103147551 | 291 |
| 143 | 3300010375 | Ga0105239_10217380 | Ga0105239_102173802 | 291 |
| 144 | 3300048928 | Ga0496125_0001253 | Ga0496125_0001253_24994_25875 | 291 |
| 145 | 3300005539 | Ga0068853_100509145 | Ga0068853_1005091451 | 293 |
| 146 | 3300025900 | Ga0207710_10001450 | Ga0207710_100014502 | 293 |
| 147 | 3300037068 | Ga0373925_0074568 | Ga0373925_0074568_460_1392 | 293 |
| 148 | 3300006028 | Ga0070717_10052049 | Ga0070717_100520493 | 294 |
| 149 | 3300006844 | Ga0075428_100760720 | Ga0075428_1007607202 | 294 |
| 150 | 3300009147 | Ga0114129_10365981 | Ga0114129_103659812 | 294 |
| 151 | 3300050507 | nmdc:mga05p37_171181_c1 | nmdc:mga05p37_171181_c1_628_1512 | 294 |
| 152 | 3300048929 | Ga0496126_0002860 | Ga0496126_0002860_15579_16481 | 295 |
| 153 | 3300013100 | Ga0157373_10180386 | Ga0157373_101803862 | 297 |
| 154 | 3300025256 | Ga0209759_1023026 | Ga0209759_10230261 | 297 |
| 155 | 3300005438 | Ga0070701_10101401 | Ga0070701_101014012 | 298 |
| 156 | 3300035724 | Ga0373933_0147747 | Ga0373933_0147747_123_1070 | 298 |
| 157 | 3300006028 | Ga0070717_10322209 | Ga0070717_103222092 | 299 |
| 158 | 3300005340 | Ga0070689_100066349 | Ga0070689_1000663494 | 311 |
| 159 | 3300005441 | Ga0070700_100064743 | Ga0070700_1000647431 | 311 |
| 160 | 3300005471 | Ga0070698_100075728 | Ga0070698_1000757282 | 311 |
| 161 | 3300005549 | Ga0070704_100062308 | Ga0070704_1000623083 | 311 |
| 162 | 3300005617 | Ga0068859_100189006 | Ga0068859_1001890062 | 311 |
| 163 | 3300005618 | Ga0068864_100203905 | Ga0068864_1002039052 | 311 |
| 164 | 3300005844 | Ga0068862_100208425 | Ga0068862_1002084252 | 311 |
| 165 | 3300006931 | Ga0097620_100189007 | Ga0097620_1001890072 | 311 |
| 166 | 3300025936 | Ga0207670_10304498 | Ga0207670_103044981 | 311 |
| 167 | 3300028380 | Ga0268265_10181992 | Ga0268265_101819921 | 311 |
| 168 | 3300005468 | Ga0070707_100004786 | Ga0070707_10000478621 | 312 |
| 169 | 3300025910 | Ga0207684_10009988 | Ga0207684_100099884 | 312 |
| 170 | 3300025922 | Ga0207646_10004922 | Ga0207646_1000492222 | 312 |
| 171 | 2162886006 | SwRhRL3b_contig_2816702 | SwRhRL3b_0294.00000550 | 317 |
| 172 | 2162886007 | SwRhRL2b_contig_873095 | SwRhRL2b_0973.00007180 | 317 |
| 173 | 3300005289 | Ga0065704_10071588 | Ga0065704_100715884 | 317 |
| 174 | 3300005295 | Ga0065707_10002017 | Ga0065707_100020172 | 317 |
| 175 | 3300005518 | Ga0070699_100022013 | Ga0070699_1000220138 | 317 |
| 176 | 3300005617 | Ga0068859_100225923 | Ga0068859_1002259232 | 317 |
| 177 | 3300006844 | Ga0075428_100424657 | Ga0075428_1004246571 | 317 |
| 178 | 3300006931 | Ga0097620_100225930 | Ga0097620_1002259302 | 317 |
| 179 | 3300009094 | Ga0111539_10057697 | Ga0111539_100576972 | 317 |
| 180 | 3300009147 | Ga0114129_10036242 | Ga0114129_100362422 | 317 |
| 181 | 3300045051 | Ga0451576_0313178 | Ga0451576_0313178_180_1133 | 317 |
| 182 | 3300050507 | nmdc:mga05p37_43842_c1 | nmdc:mga05p37_43842_c1_533_1486 | 317 |
| 183 | 3300050508 | nmdc:mga09592_128533_c1 | nmdc:mga09592_128533_c1_447_1400 | 317 |
| 184 | 3300050508 | nmdc:mga09592_16583_c1 | nmdc:mga09592_16583_c1_2957_3910 | 317 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6qnz-assembly1.cif.gz_A | crystal structure of the site-specific dna nickase n.bspd6i e418a mutant | 0.7667 | 78 | 154 |
| 5liq-assembly1.cif.gz_A | the structure of c160s,c508s,c578s mutant of nt.bspd6i nicking endonuclease at 0.185 nm resolution . | 0.7607 | 78 | 154 |
| 2ewf-assembly1.cif.gz_A | crystal structure of the site-specific dna nickase n.bspd6i | 0.7598 | 78 | 154 |
| 5liq-assembly2.cif.gz_B | the structure of c160s,c508s,c578s mutant of nt.bspd6i nicking endonuclease at 0.185 nm resolution . | 0.7593 | 78 | 154 |
| 5lhc-assembly1.cif.gz_B | the structure of d456a mutant of nt.bspd6i nicking endonuclease at 0.24 nm resolution . | 0.7571 | 78 | 154 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WIY5_101_213_3.40.1350.10 | Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; | 0.8637 | 47 | 142 | 3.40.1350.10 |
| af_P45423_222_339_3.40.1350.10 | Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; | 0.8292 | 39 | 140 | 3.40.1350.10 |
| af_P45423_222_339_3.40.1350.10 | Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; | 0.7229 | 39 | 140 | 3.40.1350.10 |
| af_P9WIY5_101_213_3.40.1350.10 | Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; | 0.7117 | 47 | 142 | 3.40.1350.10 |
| 2vldB02 | Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; | 0.6852 | 47 | 143 | 3.40.1350.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2P7PE19-F1-model_v4 | deleted | 0.9794 | 37 | 154 |
|
| AF-A0A7U4JH81-F1-model_v4 | deleted | 0.9791 | 78 | 142 |
|
| AF-A0A527ZLH8-F1-model_v4 | DUF4365 domain-containing protein | 0.9773 | 28 | 128 |
GO:0003676
|
| AF-A0A0A2BK77-F1-model_v4 | Uncharacterized protein | 0.9768 | 48 | 120 |
GO:0003676
|
| AF-A0A4R3MFZ0-F1-model_v4 | Uncharacterized protein | 0.9607 | 217 | 308 |
|
Predicted Structure (AlphaFold2)
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