F281970

General Info

Members Datasets Scaffolds Average Seq Length
184 128 184 196

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100012455|Ga0070680_1000124554
Length 234
Sequence MRRAPLHHELPEDDAPDSALTEPQFRGNVVVMKAEAVATSARRGYRMQARADAAEQTALRIMDAAIGLWREVAYDEFTLQDVADRAGVSLSTVMRRFGSKEGLAEAVLTSDRIGTQRGRDTVAAGDIDAALRMIVADYESNGDAVIRMLALEDRIEMVRRVVGAGRDAHSAWVERVFAPLLASTSAVRRRQTLQLVVATDVYTWKILRRDRGLSQREARAVMRDMCRAVVEGPA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
74 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
75 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
76 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
91 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
92 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
93 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
94 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
114 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
115 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
120 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
127 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.67
Nodule 0
Rhizoplane 4.35
Rhizosphere 80.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10066325 3300005327 Bacteria 2948
2 Ga0070658_10283288 3300005327 Bacteria 1411
3 Ga0070676_10219380 3300005328 Bacteria 1255
4 Ga0070666_10144387 3300005335 Bacteria 1658
5 Ga0070680_100012455 3300005336 Bacteria 6610
6 Ga0070680_100352421 3300005336 Bacteria 1252
7 Ga0070660_100037975 3300005339 Bacteria 3653
8 Ga0070660_100072937 3300005339 Bacteria 2683
9 Ga0070660_100671968 3300005339 Unclassified 868
10 Ga0070691_10283786 3300005341 Unclassified 899
11 Ga0070668_100000791 3300005347 Bacteria 21804
12 Ga0070668_100247651 3300005347 Unclassified 1478
13 Ga0070674_100471477 3300005356 Bacteria 1040
14 Ga0070673_100335187 3300005364 Bacteria 1339
15 Ga0070673_100347300 3300005364 Bacteria 1316
16 Ga0070714_100054022 3300005435 Bacteria 3431
17 Ga0070701_10332341 3300005438 Unclassified 944
18 Ga0070700_100021909 3300005441 Bacteria 3720
19 Ga0070662_100017424 3300005457 Bacteria 4843
20 Ga0070681_10301007 3300005458 Bacteria 1513
21 Ga0070698_100000984 3300005471 Bacteria 31337
22 Ga0070679_100029172 3300005530 Bacteria 5442
23 Ga0070679_100102075 3300005530 Bacteria 2854
24 Ga0070696_100007245 3300005546 Bacteria 7407
25 Ga0070693_100626275 3300005547 Bacteria 780
26 Ga0068854_100381020 3300005578 Bacteria 1162
27 Ga0068854_101277953 3300005578 Bacteria 660
28 Ga0068856_100050414 3300005614 Bacteria 4103
29 Ga0068856_100186354 3300005614 Unclassified 2089
30 Ga0068856_101126590 3300005614 Viruses 802
31 Ga0070702_100042835 3300005615 Bacteria 2547
32 Ga0068852_100005287 3300005616 Bacteria 9217
33 Ga0068861_100019461 3300005719 Bacteria 4849
34 Ga0068861_100060597 3300005719 Bacteria 2901
35 Ga0068861_100222520 3300005719 Unclassified 1596
36 Ga0068863_100000021 3300005841 Bacteria 198088
37 Ga0068862_100767874 3300005844 Unclassified 939
38 Ga0081455_10045032 3300005937 Bacteria 3842
39 Ga0075365_10003641 3300006038 Bacteria 7988
40 Ga0075365_10099023 3300006038 Bacteria 1995
41 Ga0075365_10300773 3300006038 Bacteria 1129
42 Ga0075365_10565463 3300006038 Unclassified 804
43 Ga0075368_10002311 3300006042 Bacteria 6190
44 Ga0075363_100010942 3300006048 Bacteria 4328
45 Ga0075363_100101137 3300006048 Bacteria 1595
46 Ga0075363_100373729 3300006048 Bacteria 835
47 Ga0075364_10028227 3300006051 Bacteria 3591
48 Ga0075364_10140624 3300006051 Bacteria 1623
49 Ga0075362_10002324 3300006177 Bacteria 6357
50 Ga0097621_100418742 3300006237 Bacteria 1202
51 Ga0075370_10006127 3300006353 Bacteria 6032
52 Ga0075428_100375761 3300006844 Bacteria 1524
53 Ga0075428_100428868 3300006844 Bacteria 1417
54 Ga0075430_100006271 3300006846 Bacteria 10029
55 Ga0075431_100127397 3300006847 Bacteria 2627
56 Ga0075431_101279179 3300006847 Bacteria 695
57 Ga0111539_10156547 3300009094 Bacteria 2666
58 Ga0111539_10428861 3300009094 Bacteria 1540
59 Ga0105245_10012490 3300009098 Bacteria 7389
60 Ga0105245_12021496 3300009098 Unclassified 630
61 Ga0114129_10221624 3300009147 Bacteria 2551
62 Ga0114129_10562927 3300009147 Bacteria 1481
63 Ga0114129_10904145 3300009147 Bacteria 1118
64 Ga0105243_10496812 3300009148 Bacteria 1155
65 Ga0105243_10814701 3300009148 Bacteria 921
66 Ga0105241_10085587 3300009174 Bacteria 2478
67 Ga0105248_10314064 3300009177 Bacteria 1765
68 Ga0105249_10001947 3300009553 Bacteria 17910
69 Ga0157369_10000631 3300013105 Bacteria 45670
70 Ga0157369_10054906 3300013105 Bacteria 4301
71 Ga0157374_11419452 3300013296 Unclassified 717
72 Ga0163162_11024755 3300013306 Bacteria 934
73 Ga0163163_10715303 3300014325 Unclassified 1065
74 Ga0157380_10560072 3300014326 Unclassified 1123
75 Ga0157380_10778020 3300014326 Bacteria 972
76 Ga0157376_10365885 3300014969 Bacteria 1384
77 Ga0207680_10162956 3300025903 Bacteria 1497
78 Ga0207705_10558693 3300025909 Bacteria 890
79 Ga0207707_10497381 3300025912 Bacteria 1040
80 Ga0207660_10051393 3300025917 Bacteria 2930
81 Ga0207660_10241304 3300025917 Bacteria 1424
82 Ga0207657_10069993 3300025919 Bacteria 2975
83 Ga0207652_10022513 3300025921 Bacteria 5214
84 Ga0207652_10093911 3300025921 Bacteria 2641
85 Ga0207687_10083846 3300025927 Bacteria 2309
86 Ga0207664_10625670 3300025929 Bacteria 967
87 Ga0207706_10003622 3300025933 Bacteria 14766
88 Ga0207712_10106648 3300025961 Bacteria 2093
89 Ga0207668_10330788 3300025972 Bacteria 1267
90 Ga0207668_10643060 3300025972 Unclassified 928
91 Ga0207640_10323339 3300025981 Bacteria 1229
92 Ga0207708_10025481 3300026075 Bacteria 4473
93 Ga0207702_10171988 3300026078 Bacteria 1987
94 Ga0207702_11061499 3300026078 Viruses 804
95 Ga0207641_10000094 3300026088 Bacteria 124545
96 Ga0207648_10184850 3300026089 Bacteria 1846
97 Ga0207675_100017632 3300026118 Bacteria 6660
98 Ga0207675_100028218 3300026118 Bacteria 5227
99 Ga0207683_11233280 3300026121 Bacteria 693
100 Ga0207698_10013544 3300026142 Bacteria 5386
101 Ga0207698_11398640 3300026142 Bacteria 715
102 Ga0209813_10050908 3300027866 Bacteria 1294
103 Ga0307408_100037031 3300031548 Unclassified 3434
104 Ga0307416_101201509 3300032002 Bacteria 864
105 Ga0307415_100961643 3300032126 Bacteria 791
106 Ga0373950_0039487 3300034818 Bacteria 899
107 Ga0373940_0086834 3300035088 Bacteria 932
108 Ga0373939_0024779 3300035114 Bacteria 1675
109 Ga0373962_0012125 3300035242 Bacteria 2168
110 Ga0395900_0529320 3300037418 Bacteria 1126
111 Ga0395901_0240369 3300038443 Bacteria 1889
112 Ga0395901_0349396 3300038443 Bacteria 1526
113 Ga0451807_1033533 3300041486 Unclassified 968
114 Ga0466972_0064518 3300044658 Bacteria 1753
115 Ga0466972_0070248 3300044658 Bacteria 1671
116 Ga0466961_0144605 3300044693 Bacteria 1487
117 Ga0466961_0325841 3300044693 Bacteria 936
118 Ga0466963_0224653 3300044694 Bacteria 1315
119 Ga0466963_0249911 3300044694 Bacteria 1244
120 Ga0466971_0002470 3300044719 Bacteria 7809
121 Ga0466957_0011237 3300044842 Bacteria 5157
122 Ga0466957_0017857 3300044842 Bacteria 4162
123 Ga0466957_0126070 3300044842 Bacteria 1636
124 Ga0466960_0026911 3300044901 Bacteria 2617
125 Ga0466959_0025802 3300045049 Bacteria 4358
126 Ga0466959_0200650 3300045049 Bacteria 1389
127 Ga0466958_0486930 3300045836 Bacteria 800
128 Ga0466958_0607303 3300045836 Bacteria 712
129 Ga0495603_0295286 3300046455 Bacteria 931
130 Ga0495629_0140888 3300046459 Bacteria 1678
131 Ga0495584_0175017 3300046491 Unclassified 1091
132 Ga0495596_0120721 3300046500 Bacteria 1018
133 Ga0495644_0073399 3300046523 Bacteria 1287
134 Ga0495663_0081712 3300046525 Bacteria 1042
135 Ga0495647_0001256 3300046681 Bacteria 7832
136 Ga0496104_0222952 3300048907 Bacteria 1798
137 Ga0496105_0199068 3300048908 Bacteria 1635
138 Ga0496108_0889040 3300048911 Bacteria 765
139 Ga0496109_0133633 3300048912 Bacteria 2317
140 Ga0496110_0168396 3300048913 Bacteria 1987
141 Ga0496114_0050169 3300048917 Bacteria 3473
142 Ga0496114_0080972 3300048917 Bacteria 2742
143 Ga0501034_0607743 3300049571 Unclassified 998
144 Ga0501039_0452585 3300049575 Bacteria 1008
145 Ga0501041_0042270 3300049577 Bacteria 2770
146 Ga0501067_0221623 3300049583 Unclassified 1053
147 Ga0501068_0633656 3300049584 Unclassified 697
148 Ga0501069_0079938 3300049585 Bacteria 1841
149 Ga0501070_0012967 3300049586 Bacteria 7025
150 Ga0501070_0433098 3300049586 Unclassified 1061
151 Ga0501070_0943438 3300049586 Unclassified 671
152 Ga0501072_0110836 3300049588 Bacteria 2185
153 Ga0501072_0283264 3300049588 Bacteria 1318
154 Ga0501074_0366260 3300049590 Unclassified 1022
155 Ga0501074_0471186 3300049590 Bacteria 890
156 Ga0501079_0202376 3300049741 Bacteria 1551
157 Ga0501083_0135422 3300049744 Bacteria 1614
158 Ga0501044_0205145 3300049823 Bacteria 1928
159 Ga0501045_0147068 3300049824 Bacteria 1753
160 nmdc:mga03683_34082_c1 3300050489 Bacteria 2059
161 nmdc:mga03n38_12518_c1 3300050490 Bacteria 3196
162 nmdc:mga03n38_87424_c1 3300050490 Bacteria 1477
163 nmdc:mga00v17_28393_c1 3300050491 Bacteria 2823
164 nmdc:mga00v17_5705_c1 3300050491 Bacteria 6577
165 nmdc:mga00v17_673644_c1 3300050491 Bacteria 664
166 nmdc:mga0yw44_253426_c1 3300050492 Bacteria 1172
167 nmdc:mga0yw44_2844_c1 3300050492 Bacteria 7519
168 nmdc:mga0yw44_368132_c1 3300050492 Bacteria 969
169 nmdc:mga06z11_137309_c1 3300050494 Bacteria 1379
170 nmdc:mga06z11_150011_c1 3300050494 Bacteria 1324
171 nmdc:mga04h51_3432_c1 3300050495 Bacteria 3855
172 nmdc:mga07m45_121473_c1 3300050496 Bacteria 1509
173 nmdc:mga05p37_264574_c1 3300050507 Bacteria 2056
174 nmdc:mga05p37_544006_c1 3300050507 Bacteria 1323
175 nmdc:mga09592_63641_c1 3300050508 Bacteria 3122
176 nmdc:mga0qj67_11533_c1 3300050509 Bacteria 6623
177 nmdc:mga0qj67_151842_c1 3300050509 Bacteria 1879
178 nmdc:mga0qj67_542342_c1 3300050509 Bacteria 933
179 nmdc:mga06r32_1377795_c1 3300050510 Bacteria 647
180 nmdc:mga08y16_163964_c1 3300050511 Bacteria 2309
181 nmdc:mga08y16_240479_c1 3300050511 Bacteria 1871
182 Ga0495655_0027949 3300053083 Bacteria 1343
183 Ga0500636_0136339 3300053177 Bacteria 1363
184 Ga0466962_0120170 3300061719 Bacteria 1268

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0433098 Ga0501070_0433098_33_620 170
2 3300005364 Ga0070673_100335187 Ga0070673_1003351872 179
3 3300005438 Ga0070701_10332341 Ga0070701_103323412 179
4 3300005615 Ga0070702_100042835 Ga0070702_1000428352 179
5 3300006237 Ga0097621_100418742 Ga0097621_1004187422 179
6 3300006847 Ga0075431_100127397 Ga0075431_1001273973 179
7 3300009094 Ga0111539_10428861 Ga0111539_104288612 179
8 3300009098 Ga0105245_10012490 Ga0105245_100124902 179
9 3300009147 Ga0114129_10562927 Ga0114129_105629272 179
10 3300009177 Ga0105248_10314064 Ga0105248_103140643 179
11 3300009553 Ga0105249_10001947 Ga0105249_1000194714 179
12 3300013306 Ga0163162_11024755 Ga0163162_110247552 179
13 3300014326 Ga0157380_10778020 Ga0157380_107780201 179
14 3300014969 Ga0157376_10365885 Ga0157376_103658852 179
15 3300026089 Ga0207648_10184850 Ga0207648_101848502 179
16 3300032126 Ga0307415_100961643 Ga0307415_1009616431 179
17 3300038443 Ga0395901_0240369 Ga0395901_0240369_306_848 179
18 3300046525 Ga0495663_0081712 Ga0495663_0081712_480_1022 179
19 3300050507 nmdc:mga05p37_264574_c1 nmdc:mga05p37_264574_c1_683_1225 179
20 3300050509 nmdc:mga0qj67_151842_c1 nmdc:mga0qj67_151842_c1_890_1432 179
21 3300050511 nmdc:mga08y16_240479_c1 nmdc:mga08y16_240479_c1_72_614 179
22 3300050496 nmdc:mga07m45_121473_c1 nmdc:mga07m45_121473_c1_30_590 181
23 3300009098 Ga0105245_12021496 Ga0105245_120214961 182
24 3300050491 nmdc:mga00v17_28393_c1 nmdc:mga00v17_28393_c1_2264_2812 182
25 3300009174 Ga0105241_10085587 Ga0105241_100855872 183
26 3300013296 Ga0157374_11419452 Ga0157374_114194521 185
27 3300014326 Ga0157380_10560072 Ga0157380_105600722 185
28 3300009147 Ga0114129_10904145 Ga0114129_109041452 186
29 3300046523 Ga0495644_0073399 Ga0495644_0073399_384_947 186
30 3300053083 Ga0495655_0027949 Ga0495655_0027949_236_799 186
31 3300005328 Ga0070676_10219380 Ga0070676_102193802 187
32 3300005341 Ga0070691_10283786 Ga0070691_102837861 187
33 3300005347 Ga0070668_100000791 Ga0070668_1000007912 187
34 3300005356 Ga0070674_100471477 Ga0070674_1004714772 187
35 3300005441 Ga0070700_100021909 Ga0070700_1000219095 187
36 3300005457 Ga0070662_100017424 Ga0070662_1000174242 187
37 3300005546 Ga0070696_100007245 Ga0070696_1000072455 187
38 3300005578 Ga0068854_100381020 Ga0068854_1003810202 187
39 3300005578 Ga0068854_101277953 Ga0068854_1012779531 187
40 3300005719 Ga0068861_100019461 Ga0068861_1000194612 187
41 3300005844 Ga0068862_100767874 Ga0068862_1007678742 187
42 3300006844 Ga0075428_100375761 Ga0075428_1003757612 187
43 3300006844 Ga0075428_100428868 Ga0075428_1004288682 187
44 3300006846 Ga0075430_100006271 Ga0075430_1000062716 187
45 3300006847 Ga0075431_101279179 Ga0075431_1012791791 187
46 3300009094 Ga0111539_10156547 Ga0111539_101565474 187
47 3300009147 Ga0114129_10221624 Ga0114129_102216242 187
48 3300009148 Ga0105243_10496812 Ga0105243_104968122 187
49 3300009148 Ga0105243_10814701 Ga0105243_108147011 187
50 3300025927 Ga0207687_10083846 Ga0207687_100838462 187
51 3300025933 Ga0207706_10003622 Ga0207706_1000362210 187
52 3300025961 Ga0207712_10106648 Ga0207712_101066482 187
53 3300025972 Ga0207668_10330788 Ga0207668_103307882 187
54 3300025981 Ga0207640_10323339 Ga0207640_103233392 187
55 3300026075 Ga0207708_10025481 Ga0207708_100254814 187
56 3300026118 Ga0207675_100017632 Ga0207675_1000176327 187
57 3300031548 Ga0307408_100037031 Ga0307408_1000370313 187
58 3300032002 Ga0307416_101201509 Ga0307416_1012015092 187
59 3300034818 Ga0373950_0039487 Ga0373950_0039487_23_589 187
60 3300035088 Ga0373940_0086834 Ga0373940_0086834_330_896 187
61 3300035114 Ga0373939_0024779 Ga0373939_0024779_185_751 187
62 3300035242 Ga0373962_0012125 Ga0373962_0012125_460_1026 187
63 3300046491 Ga0495584_0175017 Ga0495584_0175017_504_1070 187
64 3300046500 Ga0495596_0120721 Ga0495596_0120721_254_820 187
65 3300050507 nmdc:mga05p37_544006_c1 nmdc:mga05p37_544006_c1_390_956 187
66 3300050508 nmdc:mga09592_63641_c1 nmdc:mga09592_63641_c1_1271_1837 187
67 3300050509 nmdc:mga0qj67_11533_c1 nmdc:mga0qj67_11533_c1_153_719 187
68 3300050509 nmdc:mga0qj67_542342_c1 nmdc:mga0qj67_542342_c1_35_601 187
69 3300050510 nmdc:mga06r32_1377795_c1 nmdc:mga06r32_1377795_c1_52_618 187
70 3300050511 nmdc:mga08y16_163964_c1 nmdc:mga08y16_163964_c1_379_945 187
71 3300005327 Ga0070658_10283288 Ga0070658_102832882 188
72 3300005336 Ga0070680_100352421 Ga0070680_1003524212 188
73 3300005339 Ga0070660_100671968 Ga0070660_1006719681 188
74 3300005458 Ga0070681_10301007 Ga0070681_103010072 188
75 3300005530 Ga0070679_100102075 Ga0070679_1001020753 188
76 3300025909 Ga0207705_10558693 Ga0207705_105586931 188
77 3300025912 Ga0207707_10497381 Ga0207707_104973811 188
78 3300025917 Ga0207660_10241304 Ga0207660_102413041 188
79 3300025921 Ga0207652_10093911 Ga0207652_100939112 188
80 3300049583 Ga0501067_0221623 Ga0501067_0221623_396_1037 188
81 3300049584 Ga0501068_0633656 Ga0501068_0633656_16_657 188
82 3300050490 nmdc:mga03n38_87424_c1 nmdc:mga03n38_87424_c1_804_1385 188
83 3300006038 Ga0075365_10003641 Ga0075365_100036412 189
84 3300006042 Ga0075368_10002311 Ga0075368_100023113 189
85 3300006048 Ga0075363_100010942 Ga0075363_1000109424 189
86 3300006051 Ga0075364_10028227 Ga0075364_100282272 189
87 3300006177 Ga0075362_10002324 Ga0075362_100023241 189
88 3300006353 Ga0075370_10006127 Ga0075370_100061273 189
89 3300026121 Ga0207683_11233280 Ga0207683_112332802 189
90 3300027866 Ga0209813_10050908 Ga0209813_100509082 189
91 3300050494 nmdc:mga06z11_150011_c1 nmdc:mga06z11_150011_c1_270_854 189
92 3300005347 Ga0070668_100247651 Ga0070668_1002476512 190
93 3300005364 Ga0070673_100347300 Ga0070673_1003473002 190
94 3300005719 Ga0068861_100060597 Ga0068861_1000605973 190
95 3300006038 Ga0075365_10300773 Ga0075365_103007731 190
96 3300006048 Ga0075363_100373729 Ga0075363_1003737291 190
97 3300025972 Ga0207668_10643060 Ga0207668_106430602 190
98 3300041486 Ga0451807_1033533 Ga0451807_1033533_73_657 190
99 3300049575 Ga0501039_0452585 Ga0501039_0452585_11_595 190
100 3300049577 Ga0501041_0042270 Ga0501041_0042270_302_886 190
101 3300049586 Ga0501070_0943438 Ga0501070_0943438_76_660 190
102 3300049588 Ga0501072_0110836 Ga0501072_0110836_134_718 190
103 3300050492 nmdc:mga0yw44_253426_c1 nmdc:mga0yw44_253426_c1_189_761 190
104 3300005614 Ga0068856_100050414 Ga0068856_1000504147 191
105 3300005614 Ga0068856_100186354 Ga0068856_1001863542 191
106 3300005616 Ga0068852_100005287 Ga0068852_1000052875 191
107 3300006038 Ga0075365_10565463 Ga0075365_105654631 191
108 3300006051 Ga0075364_10140624 Ga0075364_101406242 191
109 3300026078 Ga0207702_10171988 Ga0207702_101719882 191
110 3300026142 Ga0207698_10013544 Ga0207698_100135445 191
111 3300037418 Ga0395900_0529320 Ga0395900_0529320_138_731 191
112 3300038443 Ga0395901_0349396 Ga0395901_0349396_746_1339 191
113 3300044693 Ga0466961_0144605 Ga0466961_0144605_344_937 191
114 3300044694 Ga0466963_0249911 Ga0466963_0249911_403_996 191
115 3300045049 Ga0466959_0200650 Ga0466959_0200650_189_782 191
116 3300045836 Ga0466958_0607303 Ga0466958_0607303_109_702 191
117 3300050491 nmdc:mga00v17_673644_c1 nmdc:mga00v17_673644_c1_26_619 191
118 3300050492 nmdc:mga0yw44_368132_c1 nmdc:mga0yw44_368132_c1_352_945 191
119 3300049586 Ga0501070_0012967 Ga0501070_0012967_779_1375 192
120 3300049590 Ga0501074_0471186 Ga0501074_0471186_241_837 192
121 3300049744 Ga0501083_0135422 Ga0501083_0135422_139_735 192
122 3300005719 Ga0068861_100222520 Ga0068861_1002225202 193
123 3300045836 Ga0466958_0486930 Ga0466958_0486930_152_733 193
124 3300049824 Ga0501045_0147068 Ga0501045_0147068_724_1314 194
125 3300005435 Ga0070714_100054022 Ga0070714_1000540224 195
126 3300005547 Ga0070693_100626275 Ga0070693_1006262751 195
127 3300006048 Ga0075363_100101137 Ga0075363_1001011372 195
128 3300013105 Ga0157369_10054906 Ga0157369_100549062 195
129 3300014325 Ga0163163_10715303 Ga0163163_107153032 195
130 3300025929 Ga0207664_10625670 Ga0207664_106256701 195
131 3300026142 Ga0207698_11398640 Ga0207698_113986401 195
132 3300044658 Ga0466972_0064518 Ga0466972_0064518_1095_1700 195
133 3300044658 Ga0466972_0070248 Ga0466972_0070248_614_1204 195
134 3300044842 Ga0466957_0126070 Ga0466957_0126070_976_1566 195
135 3300044901 Ga0466960_0026911 Ga0466960_0026911_98_688 195
136 3300048907 Ga0496104_0222952 Ga0496104_0222952_553_1143 195
137 3300048908 Ga0496105_0199068 Ga0496105_0199068_390_980 195
138 3300048911 Ga0496108_0889040 Ga0496108_0889040_21_611 195
139 3300048912 Ga0496109_0133633 Ga0496109_0133633_1160_1750 195
140 3300048913 Ga0496110_0168396 Ga0496110_0168396_450_1040 195
141 3300048917 Ga0496114_0050169 Ga0496114_0050169_736_1326 195
142 3300048917 Ga0496114_0080972 Ga0496114_0080972_809_1399 195
143 3300053177 Ga0500636_0136339 Ga0500636_0136339_442_1032 195
144 3300026118 Ga0207675_100028218 Ga0207675_1000282182 196
145 3300050489 nmdc:mga03683_34082_c1 nmdc:mga03683_34082_c1_834_1463 196
146 3300050490 nmdc:mga03n38_12518_c1 nmdc:mga03n38_12518_c1_412_1041 196
147 3300050491 nmdc:mga00v17_5705_c1 nmdc:mga00v17_5705_c1_722_1351 196
148 3300050492 nmdc:mga0yw44_2844_c1 nmdc:mga0yw44_2844_c1_4801_5430 196
149 3300050494 nmdc:mga06z11_137309_c1 nmdc:mga06z11_137309_c1_206_835 196
150 3300050495 nmdc:mga04h51_3432_c1 nmdc:mga04h51_3432_c1_1831_2460 196
151 3300005335 Ga0070666_10144387 Ga0070666_101443871 197
152 3300005937 Ga0081455_10045032 Ga0081455_100450324 197
153 3300025903 Ga0207680_10162956 Ga0207680_101629562 197
154 3300049571 Ga0501034_0607743 Ga0501034_0607743_56_724 197
155 3300049585 Ga0501069_0079938 Ga0501069_0079938_95_763 197
156 3300049588 Ga0501072_0283264 Ga0501072_0283264_265_933 197
157 3300049590 Ga0501074_0366260 Ga0501074_0366260_290_958 197
158 3300049741 Ga0501079_0202376 Ga0501079_0202376_855_1523 197
159 3300049823 Ga0501044_0205145 Ga0501044_0205145_1002_1670 197
160 3300005471 Ga0070698_100000984 Ga0070698_1000009842 198
161 3300006038 Ga0075365_10099023 Ga0075365_100990231 199
162 3300013105 Ga0157369_10000631 Ga0157369_100006312 199
163 3300044693 Ga0466961_0325841 Ga0466961_0325841_258_857 199
164 3300044694 Ga0466963_0224653 Ga0466963_0224653_563_1162 199
165 3300044719 Ga0466971_0002470 Ga0466971_0002470_3416_4015 199
166 3300044842 Ga0466957_0011237 Ga0466957_0011237_66_665 199
167 3300044842 Ga0466957_0017857 Ga0466957_0017857_181_780 199
168 3300045049 Ga0466959_0025802 Ga0466959_0025802_1034_1633 199
169 3300061719 Ga0466962_0120170 Ga0466962_0120170_216_815 199
170 3300005841 Ga0068863_100000021 Ga0068863_10000002162 201
171 3300026088 Ga0207641_10000094 Ga0207641_10000094106 201
172 3300046455 Ga0495603_0295286 Ga0495603_0295286_178_819 202
173 3300046459 Ga0495629_0140888 Ga0495629_0140888_74_715 202
174 3300046681 Ga0495647_0001256 Ga0495647_0001256_1692_2333 202
175 3300005327 Ga0070658_10066325 Ga0070658_100663254 203
176 3300005336 Ga0070680_100012455 Ga0070680_1000124554 203
177 3300005339 Ga0070660_100037975 Ga0070660_1000379754 203
178 3300005339 Ga0070660_100072937 Ga0070660_1000729374 203
179 3300005530 Ga0070679_100029172 Ga0070679_1000291727 203
180 3300005614 Ga0068856_101126590 Ga0068856_1011265901 203
181 3300025917 Ga0207660_10051393 Ga0207660_100513932 203
182 3300025919 Ga0207657_10069993 Ga0207657_100699934 203
183 3300025921 Ga0207652_10022513 Ga0207652_100225132 203
184 3300026078 Ga0207702_11061499 Ga0207702_110614991 203

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

61

107

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qib-assembly1.cif.gz_A crystal structure of tetr-family transcriptional regulator from streptomyces coelicolor 0.7591 24 198
4yze-assembly1.cif.gz_C crystal structure of e.coli nemr reduced form 0.7564 26 194
2qib-assembly1.cif.gz_B crystal structure of tetr-family transcriptional regulator from streptomyces coelicolor 0.7486 27 198
6ayh-assembly1.cif.gz_A-2 salmonella enterica gusr 0.7424 25 201
3lwj-assembly1.cif.gz_A-2 crystal structure of putative tetr-family transcriptional regulator (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a resolution 0.7421 24 201
ID Description Score Start End Superfamily
2np3B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9631 24 72 1.10.10.60
3bqzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9597 26 72 1.10.10.60
2jk3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9584 23 68 1.10.10.60
1jt6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9581 26 72 1.10.10.60
2gbyE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9562 26 72 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A346Y592-F1-model_v4 Transcriptional regulator, TetR family 0.9595 18 200 GO:0000976
GO:0003700
AF-A0A838W711-F1-model_v4 TetR family transcriptional regulator 0.9523 14 203 GO:0000976
GO:0003700
AF-A0A4V2ZTS7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9523 12 198 GO:0000976
GO:0003700
AF-A0A3N4H0M0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9514 25 200 GO:0003677
AF-A0A4R5FVH9-F1-model_v4 TetR family transcriptional regulator 0.9475 14 198 GO:0003677
GO:0006355

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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