F281245

General Info

Members Datasets Scaffolds Average Seq Length
183 73 183 274

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0433718|Ga0451577_0433718_97_972
Length 291
Sequence MSAPLSCKKNWTGFLTVVEINLSINTDLARDILTGFIKSEITRIGMSRAVVALSGGIDSALSLALAVDALGAENVLAVRIPYKASSKDSLDHAQLLIDQLGVPSKTIEITDMVEPLFRLNPDMSKLRKGNIMARQRMIVIYDQSEVFKGLVIGTSNKTEILLGYSTLFGDSANALNPIGDLYKTQIRQLSRAMNIPAPIIDKPPSADLWEDQTDEKELGFTYEEVDKLLYLLIDQRYSPQEAIEAGFDEKFVHSVTTRIRRNQFKRMQPPIAKISNRTIGYDFLYLRDWGT

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
37 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
42 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
43 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
44 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
45 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
52 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
53 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
54 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
55 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
56 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
57 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
65 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
66 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
67 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
68 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
69 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
70 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
71 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
72 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
73 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.55
Rhizosphere 99.45
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_3315637 2162886006 Unclassified 2182
2 JGI25406J46586_10013011 3300003203 Unclassified 3592
3 Ga0065704_10001063 3300005289 Bacteria 15201
4 Ga0065704_10080430 3300005289 Bacteria 3947
5 Ga0065704_10157767 3300005289 Bacteria 1372
6 Ga0065707_10082483 3300005295 Bacteria 14607
7 Ga0065707_10082601 3300005295 Bacteria 13465
8 Ga0065707_10119737 3300005295 Bacteria 2152
9 Ga0070689_100111502 3300005340 Bacteria 2176
10 Ga0070687_100280096 3300005343 Unclassified 1049
11 Ga0070708_100590182 3300005445 Bacteria 1047
12 Ga0070707_100728854 3300005468 Bacteria 954
13 Ga0070698_100135730 3300005471 Unclassified 2414
14 Ga0070698_100344840 3300005471 Unclassified 1421
15 Ga0070699_100079155 3300005518 Unclassified 2863
16 Ga0070699_100099265 3300005518 Bacteria 2551
17 Ga0070696_100189403 3300005546 Bacteria 1530
18 Ga0070704_100136837 3300005549 Bacteria 1907
19 Ga0070704_100160518 3300005549 Bacteria 1777
20 Ga0068857_100367765 3300005577 Bacteria 1334
21 Ga0068859_100009707 3300005617 Bacteria 9717
22 Ga0068864_100130028 3300005618 Bacteria 2261
23 Ga0068862_100211703 3300005844 Bacteria 1752
24 Ga0068862_100443782 3300005844 Unclassified 1222
25 Ga0081539_10002002 3300005985 Bacteria 30906
26 Ga0081539_10021314 3300005985 Unclassified 4336
27 Ga0075427_10000824 3300006194 Bacteria 3780
28 Ga0075428_100018227 3300006844 Bacteria 7759
29 Ga0075428_100139564 3300006844 Bacteria 2635
30 Ga0075428_100388344 3300006844 Bacteria 1496
31 Ga0075428_100689463 3300006844 Unclassified 1088
32 Ga0075431_100068144 3300006847 Bacteria 3672
33 Ga0075431_100110963 3300006847 Bacteria 2830
34 Ga0075431_100118957 3300006847 Bacteria 2726
35 Ga0075433_10010382 3300006852 Bacteria 7471
36 Ga0075433_10124971 3300006852 Unclassified 2285
37 Ga0075429_100008297 3300006880 Bacteria 9031
38 Ga0075429_100012704 3300006880 Bacteria 7305
39 Ga0075429_100042447 3300006880 Bacteria 3958
40 Ga0097620_100009707 3300006931 Bacteria 9717
41 Ga0111539_10189588 3300009094 Unclassified 2399
42 Ga0114129_10004095 3300009147 Bacteria 20597
43 Ga0114129_10010223 3300009147 Bacteria 13384
44 Ga0114129_10024044 3300009147 Bacteria 8633
45 Ga0114129_10032001 3300009147 Bacteria 7435
46 Ga0114129_10033866 3300009147 Bacteria 7215
47 Ga0114129_10060769 3300009147 Bacteria 5283
48 Ga0114129_10202816 3300009147 Bacteria 2685
49 Ga0114129_10261847 3300009147 Bacteria 2317
50 Ga0114129_10341709 3300009147 Bacteria 1985
51 Ga0105243_10004800 3300009148 Bacteria 10625
52 Ga0105243_10178979 3300009148 Bacteria 1842
53 Ga0105249_10379614 3300009553 Bacteria 1439
54 Ga0105249_10484898 3300009553 Unclassified 1279
55 Ga0105246_10112630 3300011119 Bacteria 2001
56 Ga0157380_10307043 3300014326 Bacteria 1464
57 Ga0207684_10045049 3300025910 Bacteria 3742
58 Ga0207646_10029402 3300025922 Bacteria 4995
59 Ga0207709_10055557 3300025935 Unclassified 2446
60 Ga0207670_10340831 3300025936 Unclassified 1184
61 Ga0207712_10123188 3300025961 Unclassified 1965
62 Ga0207674_10366746 3300026116 Bacteria 1392
63 Ga0265318_10003818 3300028577 Bacteria 7465
64 Ga0265318_10082841 3300028577 Unclassified 1184
65 Ga0265323_10056770 3300028653 Unclassified 1372
66 Ga0265338_10055351 3300028800 Unclassified 3529
67 Ga0265340_10008017 3300031247 Bacteria 5723
68 Ga0265331_10008926 3300031250 Bacteria 5669
69 Ga0265327_10003105 3300031251 Bacteria 16369
70 Ga0265316_10297180 3300031344 Bacteria 1177
71 Ga0307408_100380280 3300031548 Bacteria 1207
72 Ga0316575_10001313 3300031665 Bacteria 7939
73 Ga0316575_10002642 3300031665 Bacteria 6037
74 Ga0316579_10000970 3300031691 Bacteria 10038
75 Ga0316579_10004275 3300031691 Bacteria 5660
76 Ga0316576_10048491 3300031727 Unclassified 3081
77 Ga0316576_10179701 3300031727 Bacteria 1596
78 Ga0316578_10032903 3300031728 Bacteria 2966
79 Ga0316577_10001680 3300031733 Bacteria 10607
80 Ga0316577_10006356 3300031733 Bacteria 6235
81 Ga0316577_10016634 3300031733 Bacteria 4058
82 Ga0316577_10019793 3300031733 Unclassified 3728
83 Ga0307413_10047080 3300031824 Bacteria 2569
84 Ga0307416_100590787 3300032002 Bacteria 1189
85 Ga0316585_10022809 3300032137 Bacteria 1927
86 Ga0316585_10038231 3300032137 Unclassified 1525
87 Ga0316574_0000485 3300035398 Bacteria 16065
88 Ga0373933_0397528 3300035724 Bacteria 899
89 Ga0316582_0000340 3300036647 Bacteria 16513
90 Ga0316582_0002565 3300036647 Bacteria 8601
91 Ga0316582_0011366 3300036647 Bacteria 4917
92 Ga0316582_0026510 3300036647 Unclassified 3490
93 Ga0316582_0079817 3300036647 Unclassified 2134
94 Ga0316582_0089620 3300036647 Bacteria 2023
95 Ga0316582_0114599 3300036647 Bacteria 1798
96 Ga0316582_0344699 3300036647 Bacteria 1025
97 Ga0316584_0001320 3300036712 Bacteria 14676
98 Ga0316584_0005128 3300036712 Bacteria 8744
99 Ga0316584_0027241 3300036712 Bacteria 4206
100 Ga0316584_0031513 3300036712 Bacteria 3920
101 Ga0316584_0104366 3300036712 Unclassified 2122
102 Ga0316584_0197191 3300036712 Bacteria 1487
103 Ga0316584_0310580 3300036712 Bacteria 1140
104 Ga0316581_0000226 3300037588 Bacteria 9658
105 Ga0316581_0085797 3300037588 Unclassified 968
106 Ga0316581_0105598 3300037588 Bacteria 867
107 Ga0451800_1270313 3300041459 Bacteria 1008
108 Ga0451577_0001316 3300042876 Bacteria 33916
109 Ga0451577_0004452 3300042876 Bacteria 14799
110 Ga0451577_0021699 3300042876 Bacteria 5872
111 Ga0451577_0051634 3300042876 Bacteria 3671
112 Ga0451577_0083773 3300042876 Unclassified 2845
113 Ga0451577_0086555 3300042876 Bacteria 2796
114 Ga0451577_0230075 3300042876 Unclassified 1676
115 Ga0451577_0247719 3300042876 Bacteria 1613
116 Ga0451577_0433718 3300042876 Bacteria 1193
117 Ga0453683_0000406 3300044673 Bacteria 50333
118 Ga0453683_0101908 3300044673 Bacteria 1803
119 Ga0453683_0418775 3300044673 Unclassified 864
120 Ga0453684_0000003 3300044712 Bacteria 1481694
121 Ga0453684_0000056 3300044712 Bacteria 513389
122 Ga0453684_0000305 3300044712 Bacteria 207423
123 Ga0453684_0000564 3300044712 Bacteria 139611
124 Ga0453684_0000591 3300044712 Bacteria 134711
125 Ga0453684_0001493 3300044712 Bacteria 65902
126 Ga0453684_0001993 3300044712 Bacteria 52373
127 Ga0453684_0002410 3300044712 Bacteria 45577
128 Ga0453684_0003753 3300044712 Bacteria 33586
129 Ga0453684_0007517 3300044712 Bacteria 19985
130 Ga0453684_0011033 3300044712 Bacteria 15264
131 Ga0453684_0013130 3300044712 Bacteria 13510
132 Ga0453684_0016579 3300044712 Bacteria 11501
133 Ga0453684_0016630 3300044712 Bacteria 11480
134 Ga0453684_0029099 3300044712 Bacteria 7858
135 Ga0453684_0044784 3300044712 Bacteria 5914
136 Ga0453684_0070505 3300044712 Bacteria 4426
137 Ga0453684_0083207 3300044712 Bacteria 3984
138 Ga0453684_0111039 3300044712 Bacteria 3331
139 Ga0453684_0120035 3300044712 Bacteria 3176
140 Ga0453684_0120789 3300044712 Unclassified 3164
141 Ga0453684_0123160 3300044712 Bacteria 3127
142 Ga0453684_0123355 3300044712 Bacteria 3124
143 Ga0453684_0151331 3300044712 Bacteria 2757
144 Ga0453684_0163342 3300044712 Bacteria 2631
145 Ga0453684_0173823 3300044712 Bacteria 2536
146 Ga0453684_0180149 3300044712 Bacteria 2481
147 Ga0453684_0180537 3300044712 Unclassified 2478
148 Ga0453684_0192619 3300044712 Bacteria 2384
149 Ga0453684_0201409 3300044712 Bacteria 2320
150 Ga0453684_0224004 3300044712 Bacteria 2176
151 Ga0453684_0233068 3300044712 Bacteria 2124
152 Ga0453684_0386370 3300044712 Bacteria 1571
153 Ga0453684_0453367 3300044712 Bacteria 1427
154 Ga0453684_0500904 3300044712 Bacteria 1345
155 Ga0453684_0810844 3300044712 Bacteria 1009
156 Ga0453684_0811276 3300044712 Bacteria 1008
157 Ga0451576_0000045 3300045051 Bacteria 334210
158 Ga0451576_0012279 3300045051 Bacteria 9637
159 Ga0451576_0121018 3300045051 Unclassified 2725
160 Ga0451576_0128853 3300045051 Bacteria 2637
161 Ga0451576_0236776 3300045051 Bacteria 1907
162 Ga0451576_0360300 3300045051 Bacteria 1523
163 Ga0451576_0814125 3300045051 Unclassified 981
164 Ga0495628_0139834 3300046516 Bacteria 1848
165 Ga0495630_0096556 3300046517 Bacteria 2234
166 Ga0501075_0008111 3300049591 Bacteria 7306
167 Ga0501076_0082804 3300049592 Unclassified 2576
168 Ga0501202_050417 3300049652 Unclassified 921
169 Ga0501080_0032845 3300049742 Bacteria 4842
170 Ga0501081_0349107 3300049743 Unclassified 1090
171 nmdc:mga05p37_125571_c1 3300050507 Unclassified 3151
172 nmdc:mga05p37_273845_c1 3300050507 Bacteria 2016
173 nmdc:mga05p37_347722_c1 3300050507 Bacteria 1746
174 nmdc:mga05p37_4356_c1 3300050507 Bacteria 16522
175 nmdc:mga05p37_69082_c1 3300050507 Unclassified 4345
176 nmdc:mga09592_140019_c1 3300050508 Unclassified 2085
177 nmdc:mga09592_24504_c1 3300050508 Bacteria 4991
178 nmdc:mga09592_34878_c1 3300050508 Bacteria 4208
179 nmdc:mga06r32_15017_c1 3300050510 Bacteria 7029
180 nmdc:mga06r32_180887_c1 3300050510 Bacteria 2094
181 nmdc:mga06r32_226521_c1 3300050510 Bacteria 1858
182 nmdc:mga0a205_65305_c1 3300050515 Bacteria 3516
183 Ga0501084_0042312 3300054114 Unclassified 3811

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005343 Ga0070687_100280096 Ga0070687_1002800962 248
2 3300045051 Ga0451576_0814125 Ga0451576_0814125_216_962 248
3 3300044673 Ga0453683_0418775 Ga0453683_0418775_44_826 260
4 3300005295 Ga0065707_10082601 Ga0065707_100826012 273
5 3300005471 Ga0070698_100135730 Ga0070698_1001357302 273
6 3300005518 Ga0070699_100099265 Ga0070699_1000992651 273
7 3300005549 Ga0070704_100136837 Ga0070704_1001368372 273
8 3300005844 Ga0068862_100443782 Ga0068862_1004437822 273
9 3300005985 Ga0081539_10002002 Ga0081539_1000200211 273
10 3300006194 Ga0075427_10000824 Ga0075427_100008244 273
11 3300006844 Ga0075428_100018227 Ga0075428_1000182274 273
12 3300006844 Ga0075428_100139564 Ga0075428_1001395642 273
13 3300006844 Ga0075428_100388344 Ga0075428_1003883442 273
14 3300006844 Ga0075428_100689463 Ga0075428_1006894631 273
15 3300006847 Ga0075431_100068144 Ga0075431_1000681444 273
16 3300006847 Ga0075431_100110963 Ga0075431_1001109632 273
17 3300006847 Ga0075431_100118957 Ga0075431_1001189572 273
18 3300006880 Ga0075429_100008297 Ga0075429_1000082976 273
19 3300006880 Ga0075429_100012704 Ga0075429_1000127046 273
20 3300006880 Ga0075429_100042447 Ga0075429_1000424472 273
21 3300009147 Ga0114129_10004095 Ga0114129_100040959 273
22 3300009147 Ga0114129_10024044 Ga0114129_1002404410 273
23 3300009147 Ga0114129_10033866 Ga0114129_100338662 273
24 3300009147 Ga0114129_10060769 Ga0114129_100607695 273
25 3300009147 Ga0114129_10261847 Ga0114129_102618472 273
26 3300009148 Ga0105243_10178979 Ga0105243_101789792 273
27 3300009553 Ga0105249_10484898 Ga0105249_104848982 273
28 3300014326 Ga0157380_10307043 Ga0157380_103070431 273
29 3300025961 Ga0207712_10123188 Ga0207712_101231881 273
30 3300028653 Ga0265323_10056770 Ga0265323_100567702 273
31 3300031344 Ga0265316_10297180 Ga0265316_102971802 273
32 3300031548 Ga0307408_100380280 Ga0307408_1003802802 273
33 3300031665 Ga0316575_10001313 Ga0316575_100013138 273
34 3300031691 Ga0316579_10004275 Ga0316579_100042752 273
35 3300031727 Ga0316576_10048491 Ga0316576_100484912 273
36 3300031728 Ga0316578_10032903 Ga0316578_100329032 273
37 3300031733 Ga0316577_10001680 Ga0316577_100016807 273
38 3300031733 Ga0316577_10016634 Ga0316577_100166343 273
39 3300031733 Ga0316577_10019793 Ga0316577_100197932 273
40 3300031824 Ga0307413_10047080 Ga0307413_100470802 273
41 3300032002 Ga0307416_100590787 Ga0307416_1005907871 273
42 3300032137 Ga0316585_10022809 Ga0316585_100228092 273
43 3300036647 Ga0316582_0002565 Ga0316582_0002565_2838_3659 273
44 3300036647 Ga0316582_0011366 Ga0316582_0011366_3093_3914 273
45 3300036647 Ga0316582_0089620 Ga0316582_0089620_878_1699 273
46 3300036647 Ga0316582_0114599 Ga0316582_0114599_331_1152 273
47 3300036647 Ga0316582_0344699 Ga0316582_0344699_132_953 273
48 3300036712 Ga0316584_0005128 Ga0316584_0005128_2270_3091 273
49 3300036712 Ga0316584_0027241 Ga0316584_0027241_3039_3860 273
50 3300036712 Ga0316584_0031513 Ga0316584_0031513_2994_3815 273
51 3300036712 Ga0316584_0310580 Ga0316584_0310580_17_838 273
52 3300037588 Ga0316581_0105598 Ga0316581_0105598_20_841 273
53 3300042876 Ga0451577_0051634 Ga0451577_0051634_1133_1954 273
54 3300042876 Ga0451577_0230075 Ga0451577_0230075_692_1513 273
55 3300044712 Ga0453684_0000056 Ga0453684_0000056_209519_210340 273
56 3300044712 Ga0453684_0000305 Ga0453684_0000305_78067_78888 273
57 3300044712 Ga0453684_0001993 Ga0453684_0001993_48666_49487 273
58 3300044712 Ga0453684_0007517 Ga0453684_0007517_11514_12335 273
59 3300044712 Ga0453684_0011033 Ga0453684_0011033_73_894 273
60 3300044712 Ga0453684_0111039 Ga0453684_0111039_1299_2120 273
61 3300044712 Ga0453684_0120789 Ga0453684_0120789_1152_1973 273
62 3300044712 Ga0453684_0123160 Ga0453684_0123160_1413_2234 273
63 3300044712 Ga0453684_0151331 Ga0453684_0151331_1880_2701 273
64 3300044712 Ga0453684_0180537 Ga0453684_0180537_864_1685 273
65 3300044712 Ga0453684_0201409 Ga0453684_0201409_224_1045 273
66 3300044712 Ga0453684_0224004 Ga0453684_0224004_1223_2044 273
67 3300044712 Ga0453684_0386370 Ga0453684_0386370_320_1141 273
68 3300049652 Ga0501202_050417 Ga0501202_050417_89_910 273
69 3300050507 nmdc:mga05p37_125571_c1 nmdc:mga05p37_125571_c1_2032_2853 273
70 3300050507 nmdc:mga05p37_347722_c1 nmdc:mga05p37_347722_c1_671_1492 273
71 3300050507 nmdc:mga05p37_4356_c1 nmdc:mga05p37_4356_c1_13489_14310 273
72 3300050508 nmdc:mga09592_140019_c1 nmdc:mga09592_140019_c1_130_951 273
73 3300050508 nmdc:mga09592_24504_c1 nmdc:mga09592_24504_c1_21_842 273
74 3300050508 nmdc:mga09592_34878_c1 nmdc:mga09592_34878_c1_865_1686 273
75 3300050510 nmdc:mga06r32_15017_c1 nmdc:mga06r32_15017_c1_5555_6376 273
76 3300050510 nmdc:mga06r32_180887_c1 nmdc:mga06r32_180887_c1_64_885 273
77 3300050510 nmdc:mga06r32_226521_c1 nmdc:mga06r32_226521_c1_369_1190 273
78 3300005289 Ga0065704_10001063 Ga0065704_100010638 274
79 3300005295 Ga0065707_10082483 Ga0065707_100824837 274
80 3300005295 Ga0065707_10119737 Ga0065707_101197372 274
81 3300005340 Ga0070689_100111502 Ga0070689_1001115022 274
82 3300005445 Ga0070708_100590182 Ga0070708_1005901822 274
83 3300005468 Ga0070707_100728854 Ga0070707_1007288541 274
84 3300005471 Ga0070698_100344840 Ga0070698_1003448402 274
85 3300005518 Ga0070699_100079155 Ga0070699_1000791552 274
86 3300005546 Ga0070696_100189403 Ga0070696_1001894032 274
87 3300005549 Ga0070704_100160518 Ga0070704_1001605182 274
88 3300005577 Ga0068857_100367765 Ga0068857_1003677652 274
89 3300005617 Ga0068859_100009707 Ga0068859_1000097073 274
90 3300005618 Ga0068864_100130028 Ga0068864_1001300282 274
91 3300005844 Ga0068862_100211703 Ga0068862_1002117032 274
92 3300005985 Ga0081539_10021314 Ga0081539_100213144 274
93 3300006852 Ga0075433_10010382 Ga0075433_100103825 274
94 3300006931 Ga0097620_100009707 Ga0097620_10000970711 274
95 3300009147 Ga0114129_10010223 Ga0114129_100102237 274
96 3300009147 Ga0114129_10032001 Ga0114129_100320016 274
97 3300009148 Ga0105243_10004800 Ga0105243_100048004 274
98 3300009553 Ga0105249_10379614 Ga0105249_103796142 274
99 3300011119 Ga0105246_10112630 Ga0105246_101126302 274
100 3300025910 Ga0207684_10045049 Ga0207684_100450493 274
101 3300025922 Ga0207646_10029402 Ga0207646_100294023 274
102 3300025935 Ga0207709_10055557 Ga0207709_100555573 274
103 3300025936 Ga0207670_10340831 Ga0207670_103408312 274
104 3300026116 Ga0207674_10366746 Ga0207674_103667462 274
105 3300028577 Ga0265318_10003818 Ga0265318_100038188 274
106 3300028577 Ga0265318_10082841 Ga0265318_100828411 274
107 3300028800 Ga0265338_10055351 Ga0265338_100553513 274
108 3300031247 Ga0265340_10008017 Ga0265340_100080172 274
109 3300031250 Ga0265331_10008926 Ga0265331_100089264 274
110 3300031251 Ga0265327_10003105 Ga0265327_100031057 274
111 3300031727 Ga0316576_10179701 Ga0316576_101797012 274
112 3300042876 Ga0451577_0004452 Ga0451577_0004452_4881_5705 274
113 3300042876 Ga0451577_0086555 Ga0451577_0086555_193_1017 274
114 3300044712 Ga0453684_0000003 Ga0453684_0000003_1146474_1147298 274
115 3300044712 Ga0453684_0001493 Ga0453684_0001493_1850_2674 274
116 3300044712 Ga0453684_0083207 Ga0453684_0083207_405_1229 274
117 3300044712 Ga0453684_0163342 Ga0453684_0163342_97_921 274
118 3300044712 Ga0453684_0811276 Ga0453684_0811276_85_909 274
119 3300045051 Ga0451576_0128853 Ga0451576_0128853_585_1409 274
120 3300045051 Ga0451576_0236776 Ga0451576_0236776_694_1518 274
121 3300045051 Ga0451576_0360300 Ga0451576_0360300_211_1035 274
122 3300049591 Ga0501075_0008111 Ga0501075_0008111_5570_6394 274
123 3300049592 Ga0501076_0082804 Ga0501076_0082804_267_1091 274
124 3300049742 Ga0501080_0032845 Ga0501080_0032845_3596_4420 274
125 3300049743 Ga0501081_0349107 Ga0501081_0349107_162_986 274
126 3300050507 nmdc:mga05p37_69082_c1 nmdc:mga05p37_69082_c1_1208_2032 274
127 3300050515 nmdc:mga0a205_65305_c1 nmdc:mga0a205_65305_c1_362_1186 274
128 3300054114 Ga0501084_0042312 Ga0501084_0042312_911_1735 274
129 3300005289 Ga0065704_10157767 Ga0065704_101577671 275
130 3300009094 Ga0111539_10189588 Ga0111539_101895882 275
131 3300041459 Ga0451800_1270313 Ga0451800_1270313_42_869 275
132 3300042876 Ga0451577_0001316 Ga0451577_0001316_12870_13697 275
133 3300042876 Ga0451577_0021699 Ga0451577_0021699_2395_3222 275
134 3300042876 Ga0451577_0083773 Ga0451577_0083773_1034_1861 275
135 3300044673 Ga0453683_0000406 Ga0453683_0000406_870_1697 275
136 3300044673 Ga0453683_0101908 Ga0453683_0101908_585_1412 275
137 3300044712 Ga0453684_0000564 Ga0453684_0000564_105763_106590 275
138 3300044712 Ga0453684_0000591 Ga0453684_0000591_120053_120880 275
139 3300044712 Ga0453684_0002410 Ga0453684_0002410_12319_13146 275
140 3300044712 Ga0453684_0003753 Ga0453684_0003753_12432_13259 275
141 3300044712 Ga0453684_0013130 Ga0453684_0013130_321_1148 275
142 3300044712 Ga0453684_0016579 Ga0453684_0016579_9801_10628 275
143 3300044712 Ga0453684_0016630 Ga0453684_0016630_9207_10034 275
144 3300044712 Ga0453684_0029099 Ga0453684_0029099_6840_7667 275
145 3300044712 Ga0453684_0044784 Ga0453684_0044784_969_1796 275
146 3300044712 Ga0453684_0120035 Ga0453684_0120035_610_1437 275
147 3300044712 Ga0453684_0123355 Ga0453684_0123355_1939_2766 275
148 3300044712 Ga0453684_0180149 Ga0453684_0180149_1630_2457 275
149 3300044712 Ga0453684_0233068 Ga0453684_0233068_911_1738 275
150 3300045051 Ga0451576_0000045 Ga0451576_0000045_88147_88974 275
151 3300045051 Ga0451576_0012279 Ga0451576_0012279_3595_4422 275
152 3300031665 Ga0316575_10002642 Ga0316575_100026425 276
153 3300031691 Ga0316579_10000970 Ga0316579_1000097011 276
154 3300035398 Ga0316574_0000485 Ga0316574_0000485_2814_3644 276
155 3300036647 Ga0316582_0000340 Ga0316582_0000340_6169_6999 276
156 3300036712 Ga0316584_0001320 Ga0316584_0001320_2942_3772 276
157 3300037588 Ga0316581_0000226 Ga0316581_0000226_4399_5229 276
158 3300044712 Ga0453684_0070505 Ga0453684_0070505_3554_4384 276
159 3300044712 Ga0453684_0173823 Ga0453684_0173823_612_1442 276
160 3300044712 Ga0453684_0453367 Ga0453684_0453367_587_1417 276
161 3300009147 Ga0114129_10202816 Ga0114129_102028163 277
162 3300009147 Ga0114129_10341709 Ga0114129_103417092 277
163 3300031733 Ga0316577_10006356 Ga0316577_100063566 277
164 3300035724 Ga0373933_0397528 Ga0373933_0397528_17_850 277
165 3300036647 Ga0316582_0026510 Ga0316582_0026510_2249_3082 277
166 3300036647 Ga0316582_0079817 Ga0316582_0079817_1030_1863 277
167 3300036712 Ga0316584_0104366 Ga0316584_0104366_739_1572 277
168 3300036712 Ga0316584_0197191 Ga0316584_0197191_172_1005 277
169 3300037588 Ga0316581_0085797 Ga0316581_0085797_68_901 277
170 3300042876 Ga0451577_0247719 Ga0451577_0247719_722_1555 277
171 3300044712 Ga0453684_0810844 Ga0453684_0810844_146_979 277
172 3300046516 Ga0495628_0139834 Ga0495628_0139834_78_911 277
173 3300046517 Ga0495630_0096556 Ga0495630_0096556_558_1391 277
174 3300050507 nmdc:mga05p37_273845_c1 nmdc:mga05p37_273845_c1_348_1265 277
175 2162886006 SwRhRL3b_contig_3315637 SwRhRL3b_0417.00000020 278
176 3300003203 JGI25406J46586_10013011 JGI25406J46586_100130113 278
177 3300005289 Ga0065704_10080430 Ga0065704_100804304 278
178 3300006852 Ga0075433_10124971 Ga0075433_101249711 278
179 3300032137 Ga0316585_10038231 Ga0316585_100382312 278
180 3300042876 Ga0451577_0433718 Ga0451577_0433718_97_972 278
181 3300044712 Ga0453684_0192619 Ga0453684_0192619_1190_2047 278
182 3300044712 Ga0453684_0500904 Ga0453684_0500904_116_967 278
183 3300045051 Ga0451576_0121018 Ga0451576_0121018_591_1433 278

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02540

NAD_synthase

NAD synthase

30

269

0.97

PF06508

QueC

Queuosine biosynthesis protein QueC

48

120

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xnh-assembly1.cif.gz_A-2 crystal structure of nh3-dependent nad+ synthetase from helicobacter pylori 0.9263 14 260
1xnh-assembly1.cif.gz_A-2 crystal structure of nh3-dependent nad+ synthetase from helicobacter pylori 0.9086 14 260
3p52-assembly1.cif.gz_B nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni nctc 11168 in complex with the nitrate ion 0.904 11 260
3fiu-assembly2.cif.gz_D structure of nmn synthetase from francisella tularensis 0.9031 10 261
3p52-assembly1.cif.gz_B nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni nctc 11168 in complex with the nitrate ion 0.9003 11 260
ID Description Score Start End Superfamily
1xnhA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9289 14 253 3.40.50.620
af_Q58747_4_258_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9257 10 260 3.40.50.620
af_Q58747_4_258_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9084 10 260 3.40.50.620
1xnhA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9071 14 253 3.40.50.620
3fiuC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9024 10 261 3.40.50.620
ID Description Score Start End GO Terms
AF-K1GH64-F1-model_v4 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) 0.9837 8 97 GO:0003952
GO:0004359
GO:0005524
GO:0005737
GO:0008795
GO:0009435
AF-A0A849EV41-F1-model_v4 NAD+ synthase 0.9807 13 94 GO:0000257
GO:0003952
GO:0004359
GO:0005524
GO:0005737
GO:0009435
AF-A0A388TJ16-F1-model_v4 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) 0.9762 11 142 GO:0003952
GO:0004359
GO:0005524
GO:0005737
GO:0008795
GO:0009435
AF-A0A662U6F9-F1-model_v4 NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5) 0.9679 10 92 GO:0003921
GO:0003952
GO:0004359
GO:0005524
GO:0005737
GO:0008795
GO:0009435
AF-X1ND94-F1-model_v4 NAD/GMP synthase domain-containing protein 0.9641 10 97

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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