F280584

General Info

Members Datasets Scaffolds Average Seq Length
183 115 366 188

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10117465|Ga0081455_101174654
Length 209
Sequence LSRIIAGSRGGQRIAMPQSNHARPTTDRVREALFSAIAAWAGRAAEPVEDSLAGLAFCDLYAGSGAVGLEAASRGATRVLLVERDPRIAQLGRRNAKTLGLAVDIVVSPVEQVLRKAPPHPFDIVFADPPYELDTPTVSAQIQQLVGNAWIDDGSLIVVERSRRTPQLIWPDSAVKRWSRAYGETILSFGSLELSSGSSGPAPDRAPPC

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
28 3300012507 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
49 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
57 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
64 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
65 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
66 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
73 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
74 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
75 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
76 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
81 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
82 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
83 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
84 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
85 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 2643221641 Nocardioides sp. Root122 Isolate Unclassified
106 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
107 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
108 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
109 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
110 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
111 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
112 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
113 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
114 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
115 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.35
Metatranscriptomes 1.64
Isolates 6.01

Biome Distribution

Category Percentage (%)
Aerial Root 0.55
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.09
Rhizosphere 93.44
Stem 0
Stem Tuber 0
Unclassified 2.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10117465 3300005937 Bacteria 2102
2 Ga0070668_100622627 3300005347 Bacteria 946
3 Ga0070659_100056227 3300005366 Bacteria 3103
4 Ga0070700_100075820 3300005441 Bacteria 2158
5 Ga0070694_100026354 3300005444 Bacteria 3767
6 Ga0070662_100036512 3300005457 Bacteria 3477
7 Ga0070698_100039781 3300005471 Bacteria 4836
8 Ga0070684_100690406 3300005535 Bacteria 951
9 Ga0068853_100509275 3300005539 Bacteria 1137
10 Ga0068861_100242316 3300005719 Bacteria 1534
11 Ga0068861_100460228 3300005719 Bacteria 1142
12 Ga0081455_10003491 3300005937 Bacteria 18054
13 Ga0081455_10020641 3300005937 Bacteria 6196
14 Ga0081455_10106609 3300005937 Unclassified 2236
15 Ga0081455_10126990 3300005937 Unclassified 2000
16 Ga0081538_10007881 3300005981 Bacteria 9127
17 Ga0081538_10090136 3300005981 Bacteria 1589
18 Ga0081538_10204081 3300005981 Unclassified 807
19 Ga0075432_10010976 3300006058 Bacteria 3077
20 Ga0075428_100054615 3300006844 Bacteria 4377
21 Ga0075428_100107689 3300006844 Bacteria 3037
22 Ga0075430_100062350 3300006846 Bacteria 3132
23 Ga0075430_100322044 3300006846 Bacteria 1278
24 Ga0075430_100555711 3300006846 Bacteria 947
25 Ga0075430_100775925 3300006846 Bacteria 790
26 Ga0075431_100182869 3300006847 Bacteria 2151
27 Ga0075433_10294044 3300006852 Bacteria 1438
28 Ga0075434_100070882 3300006871 Bacteria 3476
29 Ga0075434_100691154 3300006871 Bacteria 1038
30 Ga0075436_100350412 3300006914 Bacteria 1064
31 Ga0111539_10017470 3300009094 Bacteria 8881
32 Ga0111539_10144733 3300009094 Bacteria 2783
33 Ga0111539_10147512 3300009094 Bacteria 2754
34 Ga0111539_10331603 3300009094 Bacteria 1771
35 Ga0111539_10626397 3300009094 Bacteria 1253
36 Ga0105245_10027615 3300009098 Bacteria 5001
37 Ga0105245_10882845 3300009098 Unclassified 935
38 Ga0114129_10002742 3300009147 Bacteria 24550
39 Ga0114129_10006297 3300009147 Bacteria 16825
40 Ga0105243_10006271 3300009148 Bacteria 9187
41 Ga0105243_10632300 3300009148 Bacteria 1035
42 Ga0105242_10035528 3300009176 Bacteria 3996
43 Ga0105238_10527054 3300009551 Bacteria 1184
44 Ga0105249_10655288 3300009553 Bacteria 1108
45 Ga0105239_10244430 3300010375 Bacteria 2015
46 Ga0157319_1000434 3300012497 Bacteria 1901
47 Ga0157342_1003332 3300012507 Bacteria 1370
48 Ga0157370_10631845 3300013104 Bacteria 979
49 Ga0157369_10139784 3300013105 Bacteria 2563
50 Ga0157378_10348683 3300013297 Bacteria 1446
51 Ga0163162_10124005 3300013306 Bacteria 2689
52 Ga0163162_10613488 3300013306 Bacteria 1213
53 Ga0157372_10007206 3300013307 Bacteria 11840
54 Ga0157380_10010809 3300014326 Bacteria 6581
55 Ga0163161_10049345 3300017792 Bacteria 3041
56 Ga0206353_10633752 3300020082 Bacteria 4845
57 Ga0213875_10047952 3300021388 Bacteria 2004
58 Ga0207687_10058600 3300025927 Bacteria 2710
59 Ga0207706_10007615 3300025933 Bacteria 10017
60 Ga0207706_10372432 3300025933 Bacteria 1240
61 Ga0207709_10014602 3300025935 Bacteria 4340
62 Ga0207709_10212801 3300025935 Bacteria 1389
63 Ga0207704_10032877 3300025938 Bacteria 2942
64 Ga0207704_10338509 3300025938 Bacteria 1167
65 Ga0207712_10021642 3300025961 Bacteria 4223
66 Ga0207639_10474188 3300026041 Bacteria 1140
67 Ga0207675_100008076 3300026118 Bacteria 9914
68 Ga0207675_100020474 3300026118 Bacteria 6166
69 Ga0207675_100222666 3300026118 Bacteria 1818
70 Ga0207428_10047476 3300027907 Bacteria 3448
71 Ga0207428_10058203 3300027907 Bacteria 3067
72 Ga0207428_10070624 3300027907 Bacteria 2744
73 Ga0265334_10003325 3300028573 Bacteria 7335
74 Ga0307408_100031650 3300031548 Bacteria 3685
75 Ga0307408_100042419 3300031548 Bacteria 3231
76 Ga0307408_100776771 3300031548 Bacteria 867
77 Ga0316575_10045800 3300031665 Bacteria 1737
78 Ga0316579_10001773 3300031691 Bacteria 7934
79 Ga0316576_10001133 3300031727 Bacteria 13978
80 Ga0316576_10052538 3300031727 Bacteria 2967
81 Ga0316576_10921600 3300031727 Bacteria 625
82 Ga0316578_10004027 3300031728 Bacteria 6863
83 Ga0307405_10003884 3300031731 Bacteria 6971
84 Ga0307405_10083185 3300031731 Bacteria 2097
85 Ga0307405_10151432 3300031731 Bacteria 1631
86 Ga0307405_10194491 3300031731 Bacteria 1467
87 Ga0307413_10138751 3300031824 Bacteria 1676
88 Ga0307410_10002686 3300031852 Bacteria 8681
89 Ga0307410_10017239 3300031852 Bacteria 4331
90 Ga0307406_10000871 3300031901 Bacteria 16990
91 Ga0307406_10021588 3300031901 Bacteria 3810
92 Ga0307406_10092351 3300031901 Bacteria 2041
93 Ga0307406_10219352 3300031901 Bacteria 1412
94 Ga0307406_10267947 3300031901 Bacteria 1296
95 Ga0307406_10707604 3300031901 Bacteria 842
96 Ga0307407_10002721 3300031903 Bacteria 7023
97 Ga0307407_10056273 3300031903 Bacteria 2276
98 Ga0307412_10037603 3300031911 Bacteria 3111
99 Ga0307412_10074097 3300031911 Bacteria 2331
100 Ga0307412_10277552 3300031911 Bacteria 1314
101 Ga0307412_10282318 3300031911 Bacteria 1304
102 Ga0307409_100000149 3300031995 Bacteria 26564
103 Ga0307409_100004956 3300031995 Bacteria 7578
104 Ga0307409_100033744 3300031995 Bacteria 3728
105 Ga0307409_100196771 3300031995 Bacteria 1799
106 Ga0307409_100282825 3300031995 Bacteria 1534
107 Ga0307416_100071372 3300032002 Bacteria 2884
108 Ga0307416_100092606 3300032002 Bacteria 2600
109 Ga0307416_100578974 3300032002 Unclassified 1199
110 Ga0307414_10006847 3300032004 Bacteria 6377
111 Ga0307414_10105824 3300032004 Bacteria 2128
112 Ga0307411_10000604 3300032005 Bacteria 12880
113 Ga0307411_10008138 3300032005 Bacteria 5409
114 Ga0307411_10030828 3300032005 Bacteria 3291
115 Ga0307415_100018917 3300032126 Bacteria 4171
116 Ga0307415_100117357 3300032126 Bacteria 1987
117 Ga0307415_100122972 3300032126 Bacteria 1949
118 Ga0307415_100410425 3300032126 Bacteria 1159
119 Ga0316583_10055385 3300032133 Bacteria 1394
120 Ga0316585_10005653 3300032137 Bacteria 3537
121 Ga0316580_10004378 3300032139 Bacteria 4092
122 Ga0316593_10028448 3300032168 Bacteria 1802
123 Ga0316596_1026524 3300033541 Bacteria 1493
124 Ga0316574_0028763 3300035398 Bacteria 3353
125 Ga0316574_0102686 3300035398 Bacteria 1830
126 Ga0316574_0258523 3300035398 Bacteria 1112
127 Ga0316584_0035784 3300036712 Bacteria 3684
128 Ga0316584_0067868 3300036712 Bacteria 2672
129 Ga0316584_0247579 3300036712 Bacteria 1303
130 Ga0316584_0304106 3300036712 Bacteria 1154
131 Ga0316584_0513731 3300036712 Bacteria 840
132 Ga0395899_0026513 3300037312 Bacteria 4373
133 Ga0395900_0384700 3300037418 Bacteria 1370
134 Ga0436364_0162068 3300037853 Bacteria 10276
135 Ga0451837_1138896 3300041494 Bacteria 2030
136 Ga0439460_0017367 3300042461 Bacteria 1927
137 Ga0439440_0119534 3300042993 Bacteria 732
138 Ga0453684_0015691 3300044712 Bacteria 11939
139 Ga0453684_0870928 3300044712 Bacteria 966
140 Ga0453684_0901925 3300044712 Bacteria 946
141 Ga0466958_0524364 3300045836 Bacteria 769
142 Ga0466967_0674504 3300045976 Bacteria 1023
143 Ga0495620_0081423 3300046515 Bacteria 1309
144 Ga0495637_0217421 3300046520 Bacteria 697
145 Ga0495644_0026930 3300046523 Bacteria 2180
146 Ga0495665_0284399 3300046531 Bacteria 848
147 Ga0495659_0156390 3300046664 Bacteria 918
148 Ga0495672_0012010 3300047320 Bacteria 6066
149 Ga0495626_0158329 3300048091 Bacteria 951
150 Ga0496108_0354855 3300048911 Bacteria 1280
151 Ga0496114_0043728 3300048917 Bacteria 3714
152 Ga0501038_0096581 3300049574 Bacteria 2466
153 Ga0501040_0528738 3300049576 Bacteria 851
154 Ga0501041_0142677 3300049577 Bacteria 1494
155 Ga0501067_0053973 3300049583 Bacteria 2227
156 Ga0501067_0089596 3300049583 Bacteria 1707
157 Ga0501072_0291279 3300049588 Bacteria 1298
158 Ga0501075_0098477 3300049591 Bacteria 2220
159 Ga0501076_0388132 3300049592 Bacteria 1148
160 Ga0501279_048529 3300049775 Bacteria 668
161 nmdc:mga05p37_1890_c1 3300050507 Bacteria 24394
162 nmdc:mga05p37_303032_c1 3300050507 Bacteria 1898
163 nmdc:mga09592_186124_c1 3300050508 Bacteria 1797
164 nmdc:mga0qj67_40028_c1 3300050509 Bacteria 3683
165 nmdc:mga06r32_432419_c1 3300050510 Bacteria 1297
166 nmdc:mga06r32_928144_c1 3300050510 Bacteria 826
167 nmdc:mga08y16_118305_c1 3300050511 Bacteria 2758
168 nmdc:mga08y16_7181_c1 3300050511 Bacteria 11689
169 nmdc:mga0rr50_49074_c1 3300050513 Bacteria 3124
170 nmdc:mga0a205_105148_c1 3300050515 Bacteria 2722
171 Ga0495619_0102024 3300053085 Bacteria 1954
172 Ga0501082_1241094 3300060353 Bacteria 651
173 2644229123 2643221641 Bacteria 4490190
174 2644456534 2643221681 Bacteria 3707866
175 2808873409 2808606365 Bacteria 4301966
176 2808878723 2808606366 Bacteria 4415912
177 2808891697 2808606370 Bacteria 4942454
178 2857713110 2857710386 Bacteria 3186771
179 2893686718 2893684298 Bacteria 2897960
180 2945921203 2945920336 Bacteria 4501603
181 2956939419 2956939328 Bacteria 3474458
182 2984594314 2984592036 Bacteria 3670284
183 3001122203 3001119090 Bacteria 3449530
184 Ga0081455_10117465
185 Ga0070668_100622627
186 Ga0070659_100056227
187 Ga0070700_100075820
188 Ga0070694_100026354
189 Ga0070662_100036512
190 Ga0070698_100039781
191 Ga0070684_100690406
192 Ga0068853_100509275
193 Ga0068861_100242316
194 Ga0068861_100460228
195 Ga0081455_10003491
196 Ga0081455_10020641
197 Ga0081455_10106609
198 Ga0081455_10126990
199 Ga0081538_10007881
200 Ga0081538_10090136
201 Ga0081538_10204081
202 Ga0075432_10010976
203 Ga0075428_100054615
204 Ga0075428_100107689
205 Ga0075430_100062350
206 Ga0075430_100322044
207 Ga0075430_100555711
208 Ga0075430_100775925
209 Ga0075431_100182869
210 Ga0075433_10294044
211 Ga0075434_100070882
212 Ga0075434_100691154
213 Ga0075436_100350412
214 Ga0111539_10017470
215 Ga0111539_10144733
216 Ga0111539_10147512
217 Ga0111539_10331603
218 Ga0111539_10626397
219 Ga0105245_10027615
220 Ga0105245_10882845
221 Ga0114129_10002742
222 Ga0114129_10006297
223 Ga0105243_10006271
224 Ga0105243_10632300
225 Ga0105242_10035528
226 Ga0105238_10527054
227 Ga0105249_10655288
228 Ga0105239_10244430
229 Ga0157319_1000434
230 Ga0157342_1003332
231 Ga0157370_10631845
232 Ga0157369_10139784
233 Ga0157378_10348683
234 Ga0163162_10124005
235 Ga0163162_10613488
236 Ga0157372_10007206
237 Ga0157380_10010809
238 Ga0163161_10049345
239 Ga0206353_10633752
240 Ga0213875_10047952
241 Ga0207687_10058600
242 Ga0207706_10007615
243 Ga0207706_10372432
244 Ga0207709_10014602
245 Ga0207709_10212801
246 Ga0207704_10032877
247 Ga0207704_10338509
248 Ga0207712_10021642
249 Ga0207639_10474188
250 Ga0207675_100008076
251 Ga0207675_100020474
252 Ga0207675_100222666
253 Ga0207428_10047476
254 Ga0207428_10058203
255 Ga0207428_10070624
256 Ga0265334_10003325
257 Ga0307408_100031650
258 Ga0307408_100042419
259 Ga0307408_100776771
260 Ga0316575_10045800
261 Ga0316579_10001773
262 Ga0316576_10001133
263 Ga0316576_10052538
264 Ga0316576_10921600
265 Ga0316578_10004027
266 Ga0307405_10003884
267 Ga0307405_10083185
268 Ga0307405_10151432
269 Ga0307405_10194491
270 Ga0307413_10138751
271 Ga0307410_10002686
272 Ga0307410_10017239
273 Ga0307406_10000871
274 Ga0307406_10021588
275 Ga0307406_10092351
276 Ga0307406_10219352
277 Ga0307406_10267947
278 Ga0307406_10707604
279 Ga0307407_10002721
280 Ga0307407_10056273
281 Ga0307412_10037603
282 Ga0307412_10074097
283 Ga0307412_10277552
284 Ga0307412_10282318
285 Ga0307409_100000149
286 Ga0307409_100004956
287 Ga0307409_100033744
288 Ga0307409_100196771
289 Ga0307409_100282825
290 Ga0307416_100071372
291 Ga0307416_100092606
292 Ga0307416_100578974
293 Ga0307414_10006847
294 Ga0307414_10105824
295 Ga0307411_10000604
296 Ga0307411_10008138
297 Ga0307411_10030828
298 Ga0307415_100018917
299 Ga0307415_100117357
300 Ga0307415_100122972
301 Ga0307415_100410425
302 Ga0316583_10055385
303 Ga0316585_10005653
304 Ga0316580_10004378
305 Ga0316593_10028448
306 Ga0316596_1026524
307 Ga0316574_0028763
308 Ga0316574_0102686
309 Ga0316574_0258523
310 Ga0316584_0035784
311 Ga0316584_0067868
312 Ga0316584_0247579
313 Ga0316584_0304106
314 Ga0316584_0513731
315 Ga0395899_0026513
316 Ga0395900_0384700
317 Ga0436364_0162068
318 Ga0451837_1138896
319 Ga0439460_0017367
320 Ga0439440_0119534
321 Ga0453684_0015691
322 Ga0453684_0870928
323 Ga0453684_0901925
324 Ga0466958_0524364
325 Ga0466967_0674504
326 Ga0495620_0081423
327 Ga0495637_0217421
328 Ga0495644_0026930
329 Ga0495665_0284399
330 Ga0495659_0156390
331 Ga0495672_0012010
332 Ga0495626_0158329
333 Ga0496108_0354855
334 Ga0496114_0043728
335 Ga0501038_0096581
336 Ga0501040_0528738
337 Ga0501041_0142677
338 Ga0501067_0053973
339 Ga0501067_0089596
340 Ga0501072_0291279
341 Ga0501075_0098477
342 Ga0501076_0388132
343 Ga0501279_048529
344 nmdc:mga05p37_1890_c1
345 nmdc:mga05p37_303032_c1
346 nmdc:mga09592_186124_c1
347 nmdc:mga0qj67_40028_c1
348 nmdc:mga06r32_432419_c1
349 nmdc:mga06r32_928144_c1
350 nmdc:mga08y16_118305_c1
351 nmdc:mga08y16_7181_c1
352 nmdc:mga0rr50_49074_c1
353 nmdc:mga0a205_105148_c1
354 Ga0495619_0102024
355 Ga0501082_1241094
356 2644229123
357 2644456534
358 2808873409
359 2808878723
360 2808891697
361 2857713110
362 2893686718
363 2945921203
364 2956939419
365 2984594314
366 3001122203

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03602

Cons_hypoth95

Conserved hypothetical protein 95

2

191

0.93

PF05175

MTS

Methyltransferase small domain

48

169

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fhp-assembly1.cif.gz_A crystal structure of putative methylase from enterococcus faecalis 0.9056 1 179
2fhp-assembly1.cif.gz_A crystal structure of putative methylase from enterococcus faecalis 0.9008 1 179
1ws6-assembly1.cif.gz_A the structure of thermus thermphillus hb8 hypothetical protein ttha0928 0.8929 1 179
6s77-assembly1.cif.gz_A crystal structure of carm1 n265y mutant in complex with inhibitor aa183 0.8891 29 118
3wst-assembly2.cif.gz_D crystal structure of c.elegans prmt7 in complex with sah(p31) 0.8846 41 118
ID Description Score Start End Superfamily
af_Q2FZF6_1_156_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9268 25 177 3.40.50.150
af_K7MAL3_1_105_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9241 42 118 3.40.50.150
af_Q2FZF6_1_156_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8985 25 177 3.40.50.150
1ws6A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8964 1 179 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8913 37 110 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7V9PMN1-F1-model_v4 RsmD family RNA methyltransferase 0.971 52 177 GO:0003676
GO:0008168
GO:0031167
AF-A0A352B5V6-F1-model_v4 16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD 0.9679 1 104 GO:0008168
GO:0031167
AF-A0A2H6B7I1-F1-model_v4 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.171) 0.959 1 178 GO:0003676
GO:0052913
AF-A0A6I2Y525-F1-model_v4 16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD (EC 2.1.1.171) 0.9541 1 179 GO:0052913
AF-A0A1F2WUM6-F1-model_v4 16S rRNA (Guanine(966)-N(2))-methyltransferase RsmD 0.9533 1 178 GO:0003676
GO:0008168
GO:0031167

Map