F280567

General Info

Members Datasets Scaffolds Average Seq Length
183 113 366 1181

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100004088|Ga0068863_1000040886
Length 1187
Sequence MAEFVHLHLHTEFSLLDGACRIDELLDQAAALKMPAIGVTEHGNMFSSVIFHDHARARGLKPILGCEVYMAPGSRLTKSGNPGETANHLILLAETDEGYHNLIKLVSAGYTEGFYYKPRIDRELLARHAKGLIGMSSCLKGEVAEGLSHQQDKKAYDAAAAYRDILGPDNFFLELQWHGIEEQRVVNSGLPALARDLNLPLVCTNDVHYLREADAHPHDILLCIGTGKAFTDTKRLRYDAKQFFLKTPAEMAEVFKDFPDALRNTMRIAERCNVKLQEGTNYLPNFDVPPGFTLDEYFEHVTRQGFSERLTRLQQLAAAGLLRHTIDEYERRLSYELEMIKKMEYPGYFLIVWDFIRYAREQGIPVGPGRGSAAGSLVAYCLRITDVDPIDFDLIFERFLNPERVSLPDIDIDFCERRRGEVIDYVTRKYGRENVAQIITFGTMKAKAVVRDVGRVLEMPFADVDKVAKQIPPALDMTLAKALEESEPLRLMEQNDPKVKELLSVARRLEGMTRHASVHAAGVVIAPKAITEYAPLYKGARDEIVTQWSMKEIERVGLLKMDFLGLSTLTLIDDAIAEIKSTTGEQLDIDHVPLDDAKTYQIFQEGQTYGIFQFESSGMRDILRKSKPQRLDDLIALNALYRPGPLRSGMVDTWIAGKLGRTEVKYELPQLEPILADTYGVIAYQEQVMRISNVVAGFTLGEADVLRKAMGKKNPEVMAKMRGKFVEGAKKLGTNEKKATHLFDLMEHFAGYGFNKSHSTAYAFLAYQTAYLKANYPWHFAAALLTIEAQNTDKLALYLGECRDRGVPVLPPDINESQLRFTVTPQGVRFGLTAIKNVGEGAIESLLAVRKSQGRIASLHALCEELDLRLVNKRVFESLVKAGAFDSISGETELPTASIRPRLMAAIDTACEHGARLQRDRLEGQAQLFGGFGDGGDDEAGSASPAGGRFRLPEAKPWTEAEQLAYEKETLGLYWTGHPVDRYAAALKDFGAKSIAELAEGVPTAPRDNGWGPGGPKPIEVDTSVGGIVGAVRPLKTRKGDRMAVFTLEDAGGGVEVIAFPEAFQRSAGLIESGTLVLVRGRLERDEESVRLLASEVAPLDTVRERLAREIAIHFRKPADRGTLETLGEIFARHRGDRKVSFEVETGEPPNRLRVRVDVSAQIRVRPSSALIAEVESVVGTGSVELR

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
79 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
80 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
81 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
84 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
110 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
111 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
112 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.64
Nodule 0
Rhizoplane 0.55
Rhizosphere 97.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100004088 3300005841 Bacteria 14415
2 Ga0065704_10004553 3300005289 Bacteria 4925
3 Ga0065712_10000250 3300005290 Bacteria 16588
4 Ga0065707_10002090 3300005295 Bacteria 11402
5 Ga0065707_10083737 3300005295 Bacteria 8347
6 Ga0068869_100009467 3300005334 Bacteria 6322
7 Ga0068868_100002633 3300005338 Bacteria 12457
8 Ga0070660_100005717 3300005339 Bacteria 8610
9 Ga0070689_100001901 3300005340 Bacteria 13498
10 Ga0070689_100017530 3300005340 Bacteria 5262
11 Ga0070669_100001435 3300005353 Bacteria 17234
12 Ga0070675_100000679 3300005354 Bacteria 23598
13 Ga0070675_100001153 3300005354 Bacteria 19086
14 Ga0070675_100001293 3300005354 Bacteria 18299
15 Ga0070675_100012386 3300005354 Bacteria 6682
16 Ga0070675_100013092 3300005354 Bacteria 6516
17 Ga0070674_100000465 3300005356 Bacteria 20429
18 Ga0070673_100033276 3300005364 Bacteria 3891
19 Ga0070714_100002687 3300005435 Bacteria 13106
20 Ga0070705_100001284 3300005440 Bacteria 13536
21 Ga0070681_10001941 3300005458 Bacteria 18666
22 Ga0070681_10012232 3300005458 Bacteria 8507
23 Ga0068867_100001730 3300005459 Bacteria 15210
24 Ga0070699_100001247 3300005518 Bacteria 23450
25 Ga0070699_100001626 3300005518 Bacteria 20492
26 Ga0070699_100007354 3300005518 Bacteria 9589
27 Ga0070699_100027417 3300005518 Bacteria 4912
28 Ga0070672_100007732 3300005543 Bacteria 7322
29 Ga0070695_100000177 3300005545 Bacteria 30288
30 Ga0070695_100009355 3300005545 Bacteria 5830
31 Ga0070665_100002134 3300005548 Bacteria 22078
32 Ga0070665_100031848 3300005548 Bacteria 5307
33 Ga0070704_100003121 3300005549 Bacteria 9450
34 Ga0068856_100035303 3300005614 Bacteria 4899
35 Ga0068859_100020898 3300005617 Bacteria 6570
36 Ga0068864_100012359 3300005618 Bacteria 7057
37 Ga0068864_100021222 3300005618 Bacteria 5440
38 Ga0068860_100003745 3300005843 Bacteria 15648
39 Ga0068860_100005901 3300005843 Bacteria 12328
40 Ga0068860_100025207 3300005843 Bacteria 5739
41 Ga0068862_100001017 3300005844 Bacteria 26955
42 Ga0068862_100008555 3300005844 Bacteria 8467
43 Ga0081539_10000056 3300005985 Bacteria 256522
44 Ga0081539_10000460 3300005985 Bacteria 86291
45 Ga0081539_10003695 3300005985 Bacteria 18270
46 Ga0075362_10007161 3300006177 Bacteria 4206
47 Ga0097621_100001195 3300006237 Bacteria 17974
48 Ga0097621_100031420 3300006237 Bacteria 4214
49 Ga0068871_100003895 3300006358 Bacteria 10285
50 Ga0075428_100000965 3300006844 Bacteria 30443
51 Ga0075428_100010755 3300006844 Bacteria 10172
52 Ga0075428_100015792 3300006844 Bacteria 8362
53 Ga0075428_100031330 3300006844 Bacteria 5880
54 Ga0075430_100000845 3300006846 Bacteria 24023
55 Ga0075430_100013897 3300006846 Bacteria 6861
56 Ga0075433_10002878 3300006852 Bacteria 13194
57 Ga0075433_10015506 3300006852 Bacteria 6254
58 Ga0075434_100000384 3300006871 Bacteria 32269
59 Ga0075429_100005834 3300006880 Bacteria 10626
60 Ga0075429_100024797 3300006880 Bacteria 5205
61 Ga0097620_100020900 3300006931 Bacteria 6570
62 Ga0075435_100005523 3300007076 Bacteria 8839
63 Ga0111539_10000056 3300009094 Bacteria 114878
64 Ga0111539_10001720 3300009094 Bacteria 29144
65 Ga0111539_10001886 3300009094 Bacteria 27864
66 Ga0111539_10016107 3300009094 Bacteria 9277
67 Ga0114129_10001088 3300009147 Bacteria 35659
68 Ga0114129_10005805 3300009147 Bacteria 17476
69 Ga0114129_10007898 3300009147 Bacteria 15143
70 Ga0114129_10008902 3300009147 Bacteria 14313
71 Ga0114129_10012829 3300009147 Bacteria 11926
72 Ga0114129_10015905 3300009147 Bacteria 10702
73 Ga0105243_10010024 3300009148 Bacteria 7206
74 Ga0105243_10023011 3300009148 Bacteria 4740
75 Ga0105248_10005395 3300009177 Bacteria 14054
76 Ga0105248_10008392 3300009177 Bacteria 11340
77 Ga0105249_10001377 3300009553 Bacteria 21263
78 Ga0157375_10001099 3300013308 Bacteria 23450
79 Ga0157380_10001063 3300014326 Bacteria 17613
80 Ga0157380_10026254 3300014326 Bacteria 4421
81 Ga0157377_10005480 3300014745 Bacteria 5968
82 Ga0163161_10008995 3300017792 Bacteria 6906
83 Ga0207697_10000103 3300025315 Bacteria 38641
84 Ga0207682_10003159 3300025893 Bacteria 7217
85 Ga0207688_10000113 3300025901 Bacteria 32645
86 Ga0207645_10000210 3300025907 Bacteria 48170
87 Ga0207643_10000149 3300025908 Bacteria 47771
88 Ga0207643_10007381 3300025908 Bacteria 5897
89 Ga0207662_10000564 3300025918 Bacteria 16458
90 Ga0207662_10002378 3300025918 Bacteria 9424
91 Ga0207657_10014324 3300025919 Bacteria 7746
92 Ga0207646_10040785 3300025922 Bacteria 4174
93 Ga0207681_10011606 3300025923 Bacteria 5414
94 Ga0207681_10015337 3300025923 Bacteria 4778
95 Ga0207681_10016594 3300025923 Bacteria 4609
96 Ga0207650_10001740 3300025925 Bacteria 15469
97 Ga0207659_10001016 3300025926 Bacteria 16674
98 Ga0207659_10004797 3300025926 Bacteria 8200
99 Ga0207644_10013987 3300025931 Bacteria 5363
100 Ga0207706_10018156 3300025933 Bacteria 6328
101 Ga0207686_10017146 3300025934 Bacteria 4076
102 Ga0207691_10000791 3300025940 Bacteria 31463
103 Ga0207691_10004444 3300025940 Bacteria 13594
104 Ga0207691_10014580 3300025940 Bacteria 7491
105 Ga0207691_10017118 3300025940 Bacteria 6877
106 Ga0207711_10008924 3300025941 Bacteria 8382
107 Ga0207689_10000712 3300025942 Bacteria 31837
108 Ga0207689_10027605 3300025942 Bacteria 4750
109 Ga0207679_10004331 3300025945 Bacteria 8831
110 Ga0207679_10013959 3300025945 Bacteria 5268
111 Ga0207703_10013890 3300026035 Bacteria 6277
112 Ga0207703_10014607 3300026035 Bacteria 6126
113 Ga0207641_10004710 3300026088 Bacteria 11764
114 Ga0207648_10000617 3300026089 Bacteria 39882
115 Ga0207675_100005402 3300026118 Bacteria 12243
116 Ga0207675_100006286 3300026118 Bacteria 11278
117 Ga0207675_100010098 3300026118 Bacteria 8850
118 Ga0207675_100020222 3300026118 Bacteria 6207
119 Ga0207683_10006271 3300026121 Bacteria 10191
120 Ga0207428_10000512 3300027907 Bacteria 46347
121 Ga0207428_10001587 3300027907 Bacteria 23675
122 Ga0207428_10002778 3300027907 Bacteria 17388
123 Ga0207428_10003596 3300027907 Bacteria 14968
124 Ga0268266_10012836 3300028379 Bacteria 7233
125 Ga0268265_10000610 3300028380 Bacteria 35662
126 Ga0268265_10003555 3300028380 Bacteria 11148
127 Ga0268264_10005268 3300028381 Bacteria 10950
128 Ga0307406_10004783 3300031901 Bacteria 7376
129 Ga0307407_10000635 3300031903 Bacteria 11257
130 Ga0307412_10020479 3300031911 Bacteria 4026
131 Ga0307414_10006397 3300032004 Bacteria 6566
132 Ga0373928_0001011 3300035084 Bacteria 5527
133 Ga0373951_0001931 3300035091 Bacteria 5329
134 Ga0373932_0001981 3300035112 Bacteria 5404
135 Ga0373960_0001911 3300035121 Bacteria 4660
136 Ga0373943_0001465 3300035170 Bacteria 10680
137 Ga0373942_0000978 3300035207 Bacteria 7770
138 Ga0373962_0000424 3300035242 Bacteria 9211
139 Ga0373937_0001439 3300036401 Bacteria 19902
140 Ga0439433_0001115 3300041999 Bacteria 5485
141 Ga0451576_0007333 3300045051 Bacteria 13230
142 Ga0451576_0035583 3300045051 Bacteria 5281
143 Ga0495629_0018069 3300046459 Bacteria 5054
144 Ga0495643_0008388 3300046522 Bacteria 6547
145 Ga0495645_0001989 3300046543 Bacteria 13891
146 Ga0495676_0023081 3300047321 Bacteria 5404
147 Ga0496101_0001880 3300048904 Bacteria 12683
148 Ga0501040_0004220 3300049576 Bacteria 9357
149 Ga0501042_0005739 3300049578 Bacteria 8018
150 Ga0501075_0006024 3300049591 Bacteria 8313
151 Ga0501079_0010127 3300049741 Bacteria 7156
152 Ga0501044_0001483 3300049823 Bacteria 27518
153 nmdc:mga00v17_1046_c1 3300050491 Bacteria 14658
154 nmdc:mga07m45_3714_c1 3300050496 Bacteria 7383
155 nmdc:mga05p37_2258_c1 3300050507 Bacteria 15356
156 nmdc:mga05p37_43447_c1 3300050507 Bacteria 5529
157 nmdc:mga05p37_4405_c1 3300050507 Bacteria 16454
158 nmdc:mga05p37_47085_c1 3300050507 Bacteria 5303
159 nmdc:mga05p37_4887_c1 3300050507 Bacteria 15686
160 nmdc:mga09592_5911_c1 3300050508 Bacteria 9981
161 nmdc:mga06r32_694_c1 3300050510 Bacteria 29350
162 nmdc:mga08y16_15992_c1 3300050511 Bacteria 7887
163 nmdc:mga08y16_1767_c1 3300050511 Bacteria 21898
164 nmdc:mga08y16_6009_c1 3300050511 Bacteria 12725
165 nmdc:mga08y16_9616_c1 3300050511 Bacteria 10152
166 nmdc:mga0n895_1057_c1 3300050512 Bacteria 20048
167 nmdc:mga0n895_13689_c1 3300050512 Bacteria 7333
168 nmdc:mga0n895_23462_c1 3300050512 Bacteria 5799
169 nmdc:mga0rr50_10384_c1 3300050513 Bacteria 5905
170 nmdc:mga0rr50_20881_c1 3300050513 Bacteria 4458
171 nmdc:mga0rr50_8_c1 3300050513 Bacteria 271775
172 nmdc:mga0rr50_9002_c1 3300050513 Bacteria 6246
173 nmdc:mga08x19_8927_c1 3300050514 Bacteria 5981
174 nmdc:mga0a205_310_c1 3300050515 Bacteria 36161
175 nmdc:mga0a205_34533_c1 3300050515 Bacteria 4851
176 nmdc:mga0a205_6636_c1 3300050515 Bacteria 10476
177 Ga0501084_0026486 3300054114 Bacteria 4839
178 Ga0590071_000265 3300059421 Bacteria 15234
179 Ga0590074_000973 3300059423 Bacteria 4495
180 Ga0590075_000112 3300059424 Bacteria 20941
181 Ga0590077_000042 3300059426 Bacteria 29090
182 Ga0590077_000414 3300059426 Bacteria 12002
183 Ga0530510_0029355 3300061734 Bacteria 3947
184 Ga0068863_100004088
185 Ga0065704_10004553
186 Ga0065712_10000250
187 Ga0065707_10002090
188 Ga0065707_10083737
189 Ga0068869_100009467
190 Ga0068868_100002633
191 Ga0070660_100005717
192 Ga0070689_100001901
193 Ga0070689_100017530
194 Ga0070669_100001435
195 Ga0070675_100000679
196 Ga0070675_100001153
197 Ga0070675_100001293
198 Ga0070675_100012386
199 Ga0070675_100013092
200 Ga0070674_100000465
201 Ga0070673_100033276
202 Ga0070714_100002687
203 Ga0070705_100001284
204 Ga0070681_10001941
205 Ga0070681_10012232
206 Ga0068867_100001730
207 Ga0070699_100001247
208 Ga0070699_100001626
209 Ga0070699_100007354
210 Ga0070699_100027417
211 Ga0070672_100007732
212 Ga0070695_100000177
213 Ga0070695_100009355
214 Ga0070665_100002134
215 Ga0070665_100031848
216 Ga0070704_100003121
217 Ga0068856_100035303
218 Ga0068859_100020898
219 Ga0068864_100012359
220 Ga0068864_100021222
221 Ga0068860_100003745
222 Ga0068860_100005901
223 Ga0068860_100025207
224 Ga0068862_100001017
225 Ga0068862_100008555
226 Ga0081539_10000056
227 Ga0081539_10000460
228 Ga0081539_10003695
229 Ga0075362_10007161
230 Ga0097621_100001195
231 Ga0097621_100031420
232 Ga0068871_100003895
233 Ga0075428_100000965
234 Ga0075428_100010755
235 Ga0075428_100015792
236 Ga0075428_100031330
237 Ga0075430_100000845
238 Ga0075430_100013897
239 Ga0075433_10002878
240 Ga0075433_10015506
241 Ga0075434_100000384
242 Ga0075429_100005834
243 Ga0075429_100024797
244 Ga0097620_100020900
245 Ga0075435_100005523
246 Ga0111539_10000056
247 Ga0111539_10001720
248 Ga0111539_10001886
249 Ga0111539_10016107
250 Ga0114129_10001088
251 Ga0114129_10005805
252 Ga0114129_10007898
253 Ga0114129_10008902
254 Ga0114129_10012829
255 Ga0114129_10015905
256 Ga0105243_10010024
257 Ga0105243_10023011
258 Ga0105248_10005395
259 Ga0105248_10008392
260 Ga0105249_10001377
261 Ga0157375_10001099
262 Ga0157380_10001063
263 Ga0157380_10026254
264 Ga0157377_10005480
265 Ga0163161_10008995
266 Ga0207697_10000103
267 Ga0207682_10003159
268 Ga0207688_10000113
269 Ga0207645_10000210
270 Ga0207643_10000149
271 Ga0207643_10007381
272 Ga0207662_10000564
273 Ga0207662_10002378
274 Ga0207657_10014324
275 Ga0207646_10040785
276 Ga0207681_10011606
277 Ga0207681_10015337
278 Ga0207681_10016594
279 Ga0207650_10001740
280 Ga0207659_10001016
281 Ga0207659_10004797
282 Ga0207644_10013987
283 Ga0207706_10018156
284 Ga0207686_10017146
285 Ga0207691_10000791
286 Ga0207691_10004444
287 Ga0207691_10014580
288 Ga0207691_10017118
289 Ga0207711_10008924
290 Ga0207689_10000712
291 Ga0207689_10027605
292 Ga0207679_10004331
293 Ga0207679_10013959
294 Ga0207703_10013890
295 Ga0207703_10014607
296 Ga0207641_10004710
297 Ga0207648_10000617
298 Ga0207675_100005402
299 Ga0207675_100006286
300 Ga0207675_100010098
301 Ga0207675_100020222
302 Ga0207683_10006271
303 Ga0207428_10000512
304 Ga0207428_10001587
305 Ga0207428_10002778
306 Ga0207428_10003596
307 Ga0268266_10012836
308 Ga0268265_10000610
309 Ga0268265_10003555
310 Ga0268264_10005268
311 Ga0307406_10004783
312 Ga0307407_10000635
313 Ga0307412_10020479
314 Ga0307414_10006397
315 Ga0373928_0001011
316 Ga0373951_0001931
317 Ga0373932_0001981
318 Ga0373960_0001911
319 Ga0373943_0001465
320 Ga0373942_0000978
321 Ga0373962_0000424
322 Ga0373937_0001439
323 Ga0439433_0001115
324 Ga0451576_0007333
325 Ga0451576_0035583
326 Ga0495629_0018069
327 Ga0495643_0008388
328 Ga0495645_0001989
329 Ga0495676_0023081
330 Ga0496101_0001880
331 Ga0501040_0004220
332 Ga0501042_0005739
333 Ga0501075_0006024
334 Ga0501079_0010127
335 Ga0501044_0001483
336 nmdc:mga00v17_1046_c1
337 nmdc:mga07m45_3714_c1
338 nmdc:mga05p37_2258_c1
339 nmdc:mga05p37_43447_c1
340 nmdc:mga05p37_4405_c1
341 nmdc:mga05p37_47085_c1
342 nmdc:mga05p37_4887_c1
343 nmdc:mga09592_5911_c1
344 nmdc:mga06r32_694_c1
345 nmdc:mga08y16_15992_c1
346 nmdc:mga08y16_1767_c1
347 nmdc:mga08y16_6009_c1
348 nmdc:mga08y16_9616_c1
349 nmdc:mga0n895_1057_c1
350 nmdc:mga0n895_13689_c1
351 nmdc:mga0n895_23462_c1
352 nmdc:mga0rr50_10384_c1
353 nmdc:mga0rr50_20881_c1
354 nmdc:mga0rr50_8_c1
355 nmdc:mga0rr50_9002_c1
356 nmdc:mga08x19_8927_c1
357 nmdc:mga0a205_310_c1
358 nmdc:mga0a205_34533_c1
359 nmdc:mga0a205_6636_c1
360 Ga0501084_0026486
361 Ga0590071_000265
362 Ga0590074_000973
363 Ga0590075_000112
364 Ga0590077_000042
365 Ga0590077_000414
366 Ga0530510_0029355

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

568

733

0.99

PF14579

HHH_6

Helix-hairpin-helix motif

806

893

0.97

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

296

565

0.96

PF02811

PHP

PHP domain

6

178

0.95

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

1023

1100

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1quq-assembly3.cif.gz_A complex of replication protein a subunits rpa14 and rpa32 0.851 1035 1112
1l1o-assembly1.cif.gz_E structure of the human replication protein a (rpa) trimerization core 0.8413 1035 1112
1ue7-assembly1.cif.gz_B-2 crystal structure of the single-stranded dna-binding protein from mycobacterium tuberculosis 0.8319 1034 1112
3eiv-assembly2.cif.gz_A crystal structure of single-stranded dna-binding protein from streptomyces coelicolor 0.8244 1034 1111
3kdf-assembly3.cif.gz_D x-ray crystal structure of the human replication protein a complex from wheat germ cell free expression 0.8232 1035 1112
ID Description Score Start End Superfamily
af_P10443_714_886_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9558 712 884 1.10.150.870
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9477 707 884 1.10.150.870
af_P10443_714_886_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9452 712 884 1.10.150.870
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9375 707 884 1.10.150.870
af_Q9F1K0_663_817_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9294 728 881 1.10.150.870
ID Description Score Start End GO Terms
AF-A0A0G1VHW1-F1-model_v4 Polymerase III DnaE protein 0.9697 1033 1112 GO:0003676
GO:0006260
GO:0008408
AF-K1TFD5-F1-model_v4 DNA polymerase III subunit alpha 0.9683 618 802 GO:0006260
GO:0008408
AF-A0A538JML5-F1-model_v4 DNA polymerase III alpha subunit finger domain-containing protein 0.9649 590 743 GO:0006260
GO:0008408
AF-A0A544VQ57-F1-model_v4 DNA polymerase III subunit alpha (EC 2.7.7.7) 0.9645 654 776 GO:0003887
GO:0006260
GO:0008408
AF-K1TFD5-F1-model_v4 DNA polymerase III subunit alpha 0.958 618 802 GO:0006260
GO:0008408

Map