F279495

General Info

Members Datasets Scaffolds Average Seq Length
182 143 179 255

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0095849|Ga0395898_0095849_584_1477
Length 297
Sequence MDNFFDDPLALDPLGPMGISAIEDTHSTSHLLALDSLSPLFTNERQAMKIVVIGGSGLIGSKLVTRLDEDGHDAVAASPDSGVNTLTGTGLADALQGAAVVVDVSNSPSFADAAVMEFFETSTRNLLAAEAAAGVGHHVALSVVGTERLSESGYFRAKIAQEQLIRDSSIPYSIVHATQFFEFVKSIAAAATDGDTVRLAPVLIQPIAADDVAGAVSRVAEGAPANGIVEVAGPEQFRLDELIRRALSARNDPRTVVADPHARYFGAELGERTLVPGDGARIGETRFEDWLRQPASA

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
4 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
135 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
140 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
143 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.25
Metatranscriptomes 1.1
Isolates 1.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.59
Nodule 0
Rhizoplane 0.55
Rhizosphere 90.66
Stem 0
Stem Tuber 0
Unclassified 2.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_6894705 2162886012 Bacteria 1941
2 JGI24741J21665_1008826 3300001915 Bacteria 1882
3 JGI24740J21852_10026641 3300001979 Bacteria 1934
4 JGI24738J21930_10006387 3300002075 Bacteria 2768
5 JGI25153J46596_10002557 3300003215 Bacteria 10430
6 Ga0065715_10127884 3300005293 Bacteria 2077
7 Ga0065715_10149444 3300005293 Bacteria 1747
8 Ga0070658_10023800 3300005327 Bacteria 4912
9 Ga0070682_100230569 3300005337 Bacteria 1323
10 Ga0068868_100476932 3300005338 Bacteria 1089
11 Ga0070689_100002473 3300005340 Bacteria 12069
12 Ga0070675_100001284 3300005354 Bacteria 18357
13 Ga0070671_100236341 3300005355 Bacteria 1551
14 Ga0070673_100645980 3300005364 Unclassified 968
15 Ga0070688_100249540 3300005365 Bacteria 1263
16 Ga0070708_100002345 3300005445 Bacteria 14659
17 Ga0070663_100538640 3300005455 Bacteria 974
18 Ga0070706_100163656 3300005467 Bacteria 2077
19 Ga0070707_100029657 3300005468 Bacteria 5208
20 Ga0070707_100324761 3300005468 Bacteria 1495
21 Ga0070699_100005744 3300005518 Bacteria 10858
22 Ga0070699_100046680 3300005518 Bacteria 3748
23 Ga0070695_100288743 3300005545 Bacteria 1208
24 Ga0070665_100001896 3300005548 Bacteria 23653
25 Ga0068857_100012104 3300005577 Bacteria 7502
26 Ga0068854_100000369 3300005578 Bacteria 28777
27 Ga0068856_100008056 3300005614 Bacteria 10283
28 Ga0068859_100001031 3300005617 Bacteria 28545
29 Ga0068864_100026893 3300005618 Bacteria 4852
30 Ga0068864_100560168 3300005618 Bacteria 1106
31 Ga0068851_10028048 3300005834 Bacteria 2779
32 Ga0068858_100212764 3300005842 Bacteria 1829
33 Ga0068860_100009003 3300005843 Bacteria 9942
34 Ga0081539_10009313 3300005985 Bacteria 8243
35 Ga0081539_10025049 3300005985 Bacteria 3854
36 Ga0081539_10106316 3300005985 Bacteria 1421
37 Ga0075364_10118767 3300006051 Bacteria 1769
38 Ga0075369_10048624 3300006186 Bacteria 1831
39 Ga0097621_100001894 3300006237 Bacteria 14287
40 Ga0075370_10003263 3300006353 Bacteria 7687
41 Ga0068871_100001121 3300006358 Bacteria 17970
42 Ga0068871_100043129 3300006358 Bacteria 3623
43 Ga0068871_100184869 3300006358 Bacteria 1792
44 Ga0075431_100142890 3300006847 Bacteria 2467
45 Ga0075434_100093283 3300006871 Bacteria 3014
46 Ga0068865_100320763 3300006881 Bacteria 1246
47 Ga0097620_100001031 3300006931 Bacteria 28545
48 Ga0075435_100028244 3300007076 Bacteria 4398
49 Ga0075435_100165315 3300007076 Bacteria 1866
50 Ga0075435_100457562 3300007076 Bacteria 1101
51 Ga0105240_10008714 3300009093 Bacteria 14470
52 Ga0111539_10096829 3300009094 Bacteria 3466
53 Ga0105245_10011255 3300009098 Bacteria 7788
54 Ga0105245_11062593 3300009098 Bacteria 855
55 Ga0114129_10035285 3300009147 Bacteria 7066
56 Ga0114129_10284046 3300009147 Bacteria 2211
57 Ga0105241_10005712 3300009174 Bacteria 9181
58 Ga0105249_10355265 3300009553 Bacteria 1485
59 Ga0105249_10718016 3300009553 Bacteria 1060
60 Ga0105239_10006778 3300010375 Bacteria 13225
61 Ga0157373_10001489 3300013100 Bacteria 17854
62 Ga0157374_10011238 3300013296 Bacteria 7744
63 Ga0163162_10163988 3300013306 Bacteria 2345
64 Ga0157372_10006988 3300013307 Bacteria 12020
65 Ga0157380_10624190 3300014326 Bacteria 1070
66 Ga0209758_1000045 3300025297 Bacteria 369174
67 Ga0207656_10017949 3300025321 Bacteria 2779
68 Ga0207653_10064484 3300025885 Bacteria 1242
69 Ga0207705_10018958 3300025909 Bacteria 4920
70 Ga0207684_10030197 3300025910 Bacteria 4614
71 Ga0207660_10014370 3300025917 Bacteria 5205
72 Ga0207652_10168809 3300025921 Bacteria 1963
73 Ga0207646_10010496 3300025922 Bacteria 9044
74 Ga0207646_10065272 3300025922 Bacteria 3249
75 Ga0207659_10001380 3300025926 Bacteria 14503
76 Ga0207706_10073448 3300025933 Bacteria 3008
77 Ga0207670_10005243 3300025936 Bacteria 7094
78 Ga0207689_10143466 3300025942 Bacteria 1968
79 Ga0207679_10113306 3300025945 Bacteria 2145
80 Ga0207667_10031781 3300025949 Bacteria 5696
81 Ga0207712_10402985 3300025961 Bacteria 1150
82 Ga0207640_10000511 3300025981 Bacteria 23405
83 Ga0207703_10206677 3300026035 Bacteria 1748
84 Ga0207639_10022098 3300026041 Bacteria 4579
85 Ga0207702_10539942 3300026078 Bacteria 1140
86 Ga0207676_10056956 3300026095 Bacteria 3076
87 Ga0207676_10331980 3300026095 Bacteria 1400
88 Ga0207676_10373506 3300026095 Unclassified 1325
89 Ga0207674_10004554 3300026116 Bacteria 16652
90 Ga0207428_10048909 3300027907 Bacteria 3390
91 Ga0268266_10027450 3300028379 Bacteria 4840
92 Ga0268265_10143258 3300028380 Bacteria 2004
93 Ga0268264_10004693 3300028381 Bacteria 11614
94 Ga0307516_10079482 3300031730 Bacteria 3124
95 Ga0307405_10148200 3300031731 Bacteria 1646
96 Ga0307413_10119262 3300031824 Bacteria 1783
97 Ga0307410_10042151 3300031852 Bacteria 3015
98 Ga0307406_10107320 3300031901 Bacteria 1914
99 Ga0307406_10111327 3300031901 Bacteria 1886
100 Ga0307407_10018544 3300031903 Bacteria 3522
101 Ga0307409_100026994 3300031995 Bacteria 4061
102 Ga0307409_100146673 3300031995 Bacteria 2041
103 Ga0307416_100012111 3300032002 Bacteria 5792
104 Ga0307414_10047748 3300032004 Bacteria 2949
105 Ga0307411_10008479 3300032005 Bacteria 5331
106 Ga0307411_10287721 3300032005 Bacteria 1311
107 Ga0307415_100117139 3300032126 Bacteria 1989
108 Ga0307415_100133209 3300032126 Bacteria 1885
109 Ga0373927_0224201 3300035695 Bacteria 1235
110 Ga0395900_0071281 3300037418 Bacteria 3572
111 Ga0395898_0095849 3300037466 Bacteria 2850
112 Ga0395905_0014061 3300037471 Bacteria 7653
113 Ga0395905_0079602 3300037471 Bacteria 3072
114 Ga0395905_0198727 3300037471 Bacteria 1880
115 Ga0395905_0308301 3300037471 Bacteria 1471
116 Ga0395905_0359194 3300037471 Bacteria 1349
117 Ga0395901_0002386 3300038443 Bacteria 19104
118 Ga0395901_0005552 3300038443 Bacteria 12770
119 Ga0439460_0026573 3300042461 Bacteria 1620
120 Ga0466963_0222477 3300044694 Bacteria 1322
121 Ga0466968_0107490 3300044735 Bacteria 1251
122 Ga0466967_0458719 3300045976 Bacteria 1246
123 Ga0466967_0467893 3300045976 Bacteria 1234
124 Ga0466967_0736431 3300045976 Bacteria 977
125 Ga0495582_0106536 3300046473 Bacteria 1572
126 Ga0495584_0128014 3300046491 Bacteria 1288
127 Ga0495606_0155084 3300046507 Bacteria 1341
128 Ga0495628_0282103 3300046516 Bacteria 1233
129 Ga0495647_0065864 3300046681 Bacteria 1440
130 Ga0495658_0178809 3300046683 Bacteria 1316
131 Ga0496105_0052118 3300048908 Bacteria 3379
132 Ga0496119_0000323 3300048922 Bacteria 67133
133 Ga0496120_0000042 3300048923 Bacteria 197055
134 Ga0501033_0017966 3300049570 Bacteria 5340
135 Ga0501034_0013687 3300049571 Bacteria 8341
136 Ga0501040_0023519 3300049576 Bacteria 4133
137 Ga0501041_0079144 3300049577 Bacteria 2023
138 Ga0501041_0211570 3300049577 Bacteria 1216
139 Ga0501042_0048719 3300049578 Bacteria 3021
140 Ga0501042_0255068 3300049578 Bacteria 1266
141 Ga0501046_0089225 3300049580 Bacteria 2373
142 Ga0501071_0182572 3300049587 Bacteria 1572
143 Ga0501075_0019609 3300049591 Bacteria 4909
144 Ga0501076_0122453 3300049592 Bacteria 2106
145 Ga0501077_0085772 3300049593 Bacteria 1996
146 Ga0501079_0034715 3300049741 Bacteria 3880
147 Ga0501081_0050632 3300049743 Bacteria 2861
148 Ga0501044_0093948 3300049823 Bacteria 3024
149 Ga0501045_0043505 3300049824 Bacteria 3270
150 Ga0501045_0300873 3300049824 Bacteria 1194
151 nmdc:mga00v17_45698_c1 3300050491 Bacteria 2647
152 nmdc:mga07m45_42055_c1 3300050496 Bacteria 2561
153 nmdc:mga05p37_100456_c1 3300050507 Bacteria 3563
154 nmdc:mga05p37_12420_c1 3300050507 Bacteria 10171
155 nmdc:mga05p37_225706_c1 3300050507 Bacteria 2259
156 nmdc:mga05p37_44847_c1 3300050507 Bacteria 5439
157 nmdc:mga09592_492899_c1 3300050508 Bacteria 1055
158 nmdc:mga06r32_124561_c1 3300050510 Bacteria 2544
159 nmdc:mga06r32_382559_c1 3300050510 Bacteria 1390
160 nmdc:mga08y16_108774_c1 3300050511 Bacteria 2886
161 nmdc:mga08y16_183502_c1 3300050511 Bacteria 2172
162 nmdc:mga0n895_138189_c1 3300050512 Bacteria 2464
163 nmdc:mga0n895_15982_c1 3300050512 Bacteria 6871
164 nmdc:mga0n895_220413_c1 3300050512 Bacteria 1926
165 nmdc:mga0rr50_125164_c1 3300050513 Bacteria 2051
166 nmdc:mga0a205_111167_c1 3300050515 Bacteria 2639
167 nmdc:mga0a205_20253_c1 3300050515 Bacteria 6275
168 nmdc:mga0a205_233559_c1 3300050515 Bacteria 1722
169 Ga0495595_0128820 3300053084 Bacteria 1236
170 Ga0500643_005247 3300053087 Bacteria 5626
171 Ga0500583_0011507 3300053092 Bacteria 3338
172 Ga0500594_0045210 3300053118 Bacteria 1221
173 Ga0500568_0005783 3300053139 Bacteria 6321
174 Ga0500616_0000672 3300053153 Bacteria 40160
175 Ga0501084_0011779 3300054114 Bacteria 7240
176 Ga0587073_0047369 3300059492 Bacteria 961
177 Ga0587071_039758 3300060344 Bacteria 939
178 Ga0501082_0072739 3300060353 Bacteria 2961
179 Ga0530510_0004150 3300061734 Bacteria 10001

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053118 Ga0500594_0045210 Ga0500594_0045210_300_1028 242
2 iso_pu_bacteria 2912715099 2912715484 244
3 3300032126 Ga0307415_100117139 Ga0307415_1001171392 246
4 3300046473 Ga0495582_0106536 Ga0495582_0106536_304_1053 246
5 3300048908 Ga0496105_0052118 Ga0496105_0052118_1450_2199 246
6 iso_pu_bacteria 2622736626 2623589944 247
7 iso_pu_bacteria 8055172936 8055178826 247
8 3300003215 JGI25153J46596_10002557 JGI25153J46596_1000255710 248
9 3300025297 Ga0209758_1000045 Ga0209758_100004596 248
10 3300005985 Ga0081539_10025049 Ga0081539_100250494 249
11 3300050510 nmdc:mga06r32_124561_c1 nmdc:mga06r32_124561_c1_1657_2406 249
12 3300005577 Ga0068857_100012104 Ga0068857_1000121047 250
13 3300005985 Ga0081539_10009313 Ga0081539_100093131 250
14 3300006871 Ga0075434_100093283 Ga0075434_1000932832 250
15 3300009147 Ga0114129_10284046 Ga0114129_102840463 250
16 3300014326 Ga0157380_10624190 Ga0157380_106241901 250
17 3300025885 Ga0207653_10064484 Ga0207653_100644841 250
18 3300025945 Ga0207679_10113306 Ga0207679_101133063 250
19 3300026116 Ga0207674_10004554 Ga0207674_1000455413 250
20 3300037471 Ga0395905_0359194 Ga0395905_0359194_583_1335 250
21 3300049576 Ga0501040_0023519 Ga0501040_0023519_1960_2712 250
22 3300049577 Ga0501041_0079144 Ga0501041_0079144_310_1062 250
23 3300049578 Ga0501042_0048719 Ga0501042_0048719_310_1062 250
24 3300049580 Ga0501046_0089225 Ga0501046_0089225_1575_2327 250
25 3300049587 Ga0501071_0182572 Ga0501071_0182572_642_1394 250
26 3300049591 Ga0501075_0019609 Ga0501075_0019609_2242_2994 250
27 3300049592 Ga0501076_0122453 Ga0501076_0122453_1126_1878 250
28 3300049593 Ga0501077_0085772 Ga0501077_0085772_1047_1799 250
29 3300049741 Ga0501079_0034715 Ga0501079_0034715_1090_1842 250
30 3300049743 Ga0501081_0050632 Ga0501081_0050632_1928_2680 250
31 3300049824 Ga0501045_0043505 Ga0501045_0043505_304_1056 250
32 3300050512 nmdc:mga0n895_138189_c1 nmdc:mga0n895_138189_c1_1034_1786 250
33 3300050515 nmdc:mga0a205_111167_c1 nmdc:mga0a205_111167_c1_393_1145 250
34 3300054114 Ga0501084_0011779 Ga0501084_0011779_508_1260 250
35 3300060353 Ga0501082_0072739 Ga0501082_0072739_1154_1906 250
36 3300061734 Ga0530510_0004150 Ga0530510_0004150_2015_2767 250
37 3300005293 Ga0065715_10149444 Ga0065715_101494442 251
38 3300005338 Ga0068868_100476932 Ga0068868_1004769321 251
39 3300005340 Ga0070689_100002473 Ga0070689_10000247310 251
40 3300005354 Ga0070675_100001284 Ga0070675_10000128412 251
41 3300005364 Ga0070673_100645980 Ga0070673_1006459801 251
42 3300005365 Ga0070688_100249540 Ga0070688_1002495401 251
43 3300005467 Ga0070706_100163656 Ga0070706_1001636563 251
44 3300005468 Ga0070707_100029657 Ga0070707_1000296573 251
45 3300005617 Ga0068859_100001031 Ga0068859_10000103126 251
46 3300005618 Ga0068864_100560168 Ga0068864_1005601682 251
47 3300005842 Ga0068858_100212764 Ga0068858_1002127643 251
48 3300005843 Ga0068860_100009003 Ga0068860_10000900312 251
49 3300005985 Ga0081539_10106316 Ga0081539_101063162 251
50 3300006051 Ga0075364_10118767 Ga0075364_101187672 251
51 3300006358 Ga0068871_100043129 Ga0068871_1000431292 251
52 3300006931 Ga0097620_100001031 Ga0097620_10000103126 251
53 3300007076 Ga0075435_100165315 Ga0075435_1001653151 251
54 3300025910 Ga0207684_10030197 Ga0207684_100301971 251
55 3300025922 Ga0207646_10065272 Ga0207646_100652722 251
56 3300025926 Ga0207659_10001380 Ga0207659_100013807 251
57 3300025936 Ga0207670_10005243 Ga0207670_100052437 251
58 3300025942 Ga0207689_10143466 Ga0207689_101434662 251
59 3300026035 Ga0207703_10206677 Ga0207703_102066771 251
60 3300026078 Ga0207702_10539942 Ga0207702_105399421 251
61 3300026095 Ga0207676_10331980 Ga0207676_103319802 251
62 3300026095 Ga0207676_10373506 Ga0207676_103735062 251
63 3300028381 Ga0268264_10004693 Ga0268264_100046935 251
64 3300031730 Ga0307516_10079482 Ga0307516_100794822 251
65 3300031824 Ga0307413_10119262 Ga0307413_101192622 251
66 3300031852 Ga0307410_10042151 Ga0307410_100421512 251
67 3300031901 Ga0307406_10107320 Ga0307406_101073202 251
68 3300031901 Ga0307406_10111327 Ga0307406_101113273 251
69 3300031903 Ga0307407_10018544 Ga0307407_100185443 251
70 3300031995 Ga0307409_100026994 Ga0307409_1000269945 251
71 3300031995 Ga0307409_100146673 Ga0307409_1001466733 251
72 3300032002 Ga0307416_100012111 Ga0307416_1000121112 251
73 3300032004 Ga0307414_10047748 Ga0307414_100477484 251
74 3300032005 Ga0307411_10008479 Ga0307411_100084793 251
75 3300032005 Ga0307411_10287721 Ga0307411_102877212 251
76 3300032126 Ga0307415_100133209 Ga0307415_1001332092 251
77 3300046516 Ga0495628_0282103 Ga0495628_0282103_119_874 251
78 3300049570 Ga0501033_0017966 Ga0501033_0017966_1476_2231 251
79 3300049823 Ga0501044_0093948 Ga0501044_0093948_2212_2967 251
80 3300050512 nmdc:mga0n895_220413_c1 nmdc:mga0n895_220413_c1_673_1428 251
81 3300050513 nmdc:mga0rr50_125164_c1 nmdc:mga0rr50_125164_c1_1126_1881 251
82 3300053084 Ga0495595_0128820 Ga0495595_0128820_440_1195 251
83 3300053153 Ga0500616_0000672 Ga0500616_0000672_24299_25054 251
84 3300005545 Ga0070695_100288743 Ga0070695_1002887431 252
85 3300006186 Ga0075369_10048624 Ga0075369_100486242 252
86 3300006353 Ga0075370_10003263 Ga0075370_100032636 252
87 3300006847 Ga0075431_100142890 Ga0075431_1001428902 252
88 3300007076 Ga0075435_100028244 Ga0075435_1000282443 252
89 3300007076 Ga0075435_100457562 Ga0075435_1004575622 252
90 3300009094 Ga0111539_10096829 Ga0111539_100968294 252
91 3300009098 Ga0105245_11062593 Ga0105245_110625931 252
92 3300009147 Ga0114129_10035285 Ga0114129_100352854 252
93 3300009553 Ga0105249_10355265 Ga0105249_103552652 252
94 3300013306 Ga0163162_10163988 Ga0163162_101639882 252
95 3300025917 Ga0207660_10014370 Ga0207660_100143702 252
96 3300025921 Ga0207652_10168809 Ga0207652_101688092 252
97 3300025933 Ga0207706_10073448 Ga0207706_100734482 252
98 3300025961 Ga0207712_10402985 Ga0207712_104029852 252
99 3300027907 Ga0207428_10048909 Ga0207428_100489094 252
100 3300028380 Ga0268265_10143258 Ga0268265_101432581 252
101 3300035695 Ga0373927_0224201 Ga0373927_0224201_248_1006 252
102 3300042461 Ga0439460_0026573 Ga0439460_0026573_300_1058 252
103 3300044694 Ga0466963_0222477 Ga0466963_0222477_372_1130 252
104 3300044735 Ga0466968_0107490 Ga0466968_0107490_461_1219 252
105 3300045976 Ga0466967_0736431 Ga0466967_0736431_34_792 252
106 3300046491 Ga0495584_0128014 Ga0495584_0128014_127_885 252
107 3300046681 Ga0495647_0065864 Ga0495647_0065864_27_785 252
108 3300046683 Ga0495658_0178809 Ga0495658_0178809_180_938 252
109 3300049577 Ga0501041_0211570 Ga0501041_0211570_167_925 252
110 3300049578 Ga0501042_0255068 Ga0501042_0255068_192_950 252
111 3300049824 Ga0501045_0300873 Ga0501045_0300873_115_873 252
112 3300050491 nmdc:mga00v17_45698_c1 nmdc:mga00v17_45698_c1_1823_2581 252
113 3300050496 nmdc:mga07m45_42055_c1 nmdc:mga07m45_42055_c1_1544_2302 252
114 3300050507 nmdc:mga05p37_100456_c1 nmdc:mga05p37_100456_c1_2582_3340 252
115 3300050507 nmdc:mga05p37_12420_c1 nmdc:mga05p37_12420_c1_7219_7977 252
116 3300050507 nmdc:mga05p37_225706_c1 nmdc:mga05p37_225706_c1_120_878 252
117 3300050507 nmdc:mga05p37_44847_c1 nmdc:mga05p37_44847_c1_1434_2192 252
118 3300050508 nmdc:mga09592_492899_c1 nmdc:mga09592_492899_c1_161_919 252
119 3300050510 nmdc:mga06r32_382559_c1 nmdc:mga06r32_382559_c1_558_1316 252
120 3300050511 nmdc:mga08y16_108774_c1 nmdc:mga08y16_108774_c1_1865_2623 252
121 3300050511 nmdc:mga08y16_183502_c1 nmdc:mga08y16_183502_c1_1054_1812 252
122 3300050512 nmdc:mga0n895_15982_c1 nmdc:mga0n895_15982_c1_23_781 252
123 3300050515 nmdc:mga0a205_20253_c1 nmdc:mga0a205_20253_c1_3679_4437 252
124 3300050515 nmdc:mga0a205_233559_c1 nmdc:mga0a205_233559_c1_147_905 252
125 3300053092 Ga0500583_0011507 Ga0500583_0011507_272_1030 252
126 3300009098 Ga0105245_10011255 Ga0105245_100112554 253
127 3300009553 Ga0105249_10718016 Ga0105249_107180162 253
128 3300031731 Ga0307405_10148200 Ga0307405_101482002 253
129 3300045976 Ga0466967_0467893 Ga0466967_0467893_240_1001 253
130 3300046507 Ga0495606_0155084 Ga0495606_0155084_286_1047 253
131 3300048922 Ga0496119_0000323 Ga0496119_0000323_20843_21604 253
132 3300048923 Ga0496120_0000042 Ga0496120_0000042_156247_157008 253
133 3300049571 Ga0501034_0013687 Ga0501034_0013687_3843_4604 253
134 3300005468 Ga0070707_100324761 Ga0070707_1003247611 254
135 3300005518 Ga0070699_100046680 Ga0070699_1000466805 254
136 3300025922 Ga0207646_10010496 Ga0207646_100104968 254
137 3300025949 Ga0207667_10031781 Ga0207667_100317813 254
138 3300026041 Ga0207639_10022098 Ga0207639_100220986 254
139 3300037471 Ga0395905_0079602 Ga0395905_0079602_1456_2220 254
140 3300053087 Ga0500643_005247 Ga0500643_005247_2802_3572 256
141 3300001915 JGI24741J21665_1008826 JGI24741J21665_10088263 257
142 3300001979 JGI24740J21852_10026641 JGI24740J21852_100266412 257
143 3300002075 JGI24738J21930_10006387 JGI24738J21930_100063873 257
144 3300005327 Ga0070658_10023800 Ga0070658_100238005 257
145 3300005337 Ga0070682_100230569 Ga0070682_1002305692 257
146 3300005578 Ga0068854_100000369 Ga0068854_1000003692 257
147 3300005614 Ga0068856_100008056 Ga0068856_1000080569 257
148 3300005834 Ga0068851_10028048 Ga0068851_100280482 257
149 3300006237 Ga0097621_100001894 Ga0097621_1000018942 257
150 3300006358 Ga0068871_100001121 Ga0068871_1000011215 257
151 3300009093 Ga0105240_10008714 Ga0105240_1000871411 257
152 3300009174 Ga0105241_10005712 Ga0105241_100057122 257
153 3300010375 Ga0105239_10006778 Ga0105239_1000677812 257
154 3300013100 Ga0157373_10001489 Ga0157373_100014899 257
155 3300013296 Ga0157374_10011238 Ga0157374_100112383 257
156 3300013307 Ga0157372_10006988 Ga0157372_100069887 257
157 3300025321 Ga0207656_10017949 Ga0207656_100179494 257
158 3300025909 Ga0207705_10018958 Ga0207705_100189583 257
159 3300025981 Ga0207640_10000511 Ga0207640_100005115 257
160 3300037466 Ga0395898_0095849 Ga0395898_0095849_584_1477 257
161 3300037471 Ga0395905_0014061 Ga0395905_0014061_959_1759 257
162 3300038443 Ga0395901_0002386 Ga0395901_0002386_3938_4831 257
163 3300005355 Ga0070671_100236341 Ga0070671_1002363412 258
164 3300005548 Ga0070665_100001896 Ga0070665_10000189615 258
165 3300005618 Ga0068864_100026893 Ga0068864_1000268932 258
166 3300006358 Ga0068871_100184869 Ga0068871_1001848692 258
167 3300006881 Ga0068865_100320763 Ga0068865_1003207632 258
168 3300026095 Ga0207676_10056956 Ga0207676_100569563 258
169 3300028379 Ga0268266_10027450 Ga0268266_100274505 258
170 3300037418 Ga0395900_0071281 Ga0395900_0071281_2413_3201 258
171 3300037471 Ga0395905_0198727 Ga0395905_0198727_685_1503 258
172 3300037471 Ga0395905_0308301 Ga0395905_0308301_463_1251 258
173 3300038443 Ga0395901_0005552 Ga0395901_0005552_1797_2615 258
174 3300045976 Ga0466967_0458719 Ga0466967_0458719_92_868 258
175 3300053139 Ga0500568_0005783 Ga0500568_0005783_1236_2021 258
176 3300059492 Ga0587073_0047369 Ga0587073_0047369_40_834 258
177 3300060344 Ga0587071_039758 Ga0587071_039758_36_830 258
178 3300005445 Ga0070708_100002345 Ga0070708_1000023457 265
179 3300005518 Ga0070699_100005744 Ga0070699_10000574410 265
180 2162886012 MBSR1b_contig_6894705 MBSR1b_0942.00003970 267
181 3300005293 Ga0065715_10127884 Ga0065715_101278841 267
182 3300005455 Ga0070663_100538640 Ga0070663_1005386401 267

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05368

NmrA

NmrA-like family

50

236

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.8498 6 139
6jkh-assembly1.cif.gz_B the nad+-bound form of human nsdhl 0.8108 5 138
5gup-assembly1.cif.gz_L cryo-em structure of mammalian respiratory supercomplex i1iii2iv1 0.8021 8 220
6qcf-assembly1.cif.gz_A9 ovine respiratory complex i frc open class 6 0.7962 8 216
6zkg-assembly1.cif.gz_d complex i with nadh, closed 0.7918 8 244
ID Description Score Start End Superfamily
af_A0A1D6MTK5_41_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8635 7 104 3.40.50.720
af_A0A0N7KJR7_8_180_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8437 8 106 3.40.50.720
af_A0A1D6GEP1_267_439_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8284 1 102 3.40.50.720
af_Q54TU9_1_334_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8163 7 220 3.40.50.720
af_Q54L85_1_328_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8148 8 220 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4V1T6H8-F1-model_v4 deleted 1.003 8 98
AF-A0A2V6I120-F1-model_v4 NmrA family transcriptional regulator 0.9962 8 128
AF-A0A2V6TUZ8-F1-model_v4 NmrA family transcriptional regulator 0.995 8 94
AF-A0A2V5WFZ3-F1-model_v4 NmrA family transcriptional regulator 0.9938 8 100
AF-A0A6H0S832-F1-model_v4 SDR family oxidoreductase 0.9934 8 255 GO:0044877
GO:1901006

Feature Viewer

pLDDT pTM Quality
93.33 0.89 High
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Predicted Structure (AlphaFold2)

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