F278891

General Info

Members Datasets Scaffolds Average Seq Length
182 133 364 624

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10000654|Ga0081539_1000065414
Length 667
Sequence MCGIAGFVEQTAAGNGAHGTEARAERARVLDQMCRVIRHRGPDDQGTLVADGVALGMRRLSIIDLVGGHQPLSGCGGAVSIVFNGEIYNFHELQRELAARGHQFHTQSDTETIVHAYEEYGPACVEHLRGMFAFAIWDARARKLFIARDRLGKKPLYYMLTPRGTLVFGSELKSLLEHPEATREVHPEALDAYLTFGYVPDPLCILRGVRKLPPGHYLTYADGRLALTQYWDLQFEADEERRRVEDYLEELRALLDEAVRIRLVADVPLGAFLSGGIDSSAVVGLMARHTDRPVKTFSIGFNEDSYNELKYARVAAKHFGTEHHEFVVTPDICRLVDELAWHFDEPFADSSALPTYMVSKLAREHVTVALSGDGGDELFAGYTRYVVERQRDKFARIPRAVRQNLMRPLSRRLPHGAWGRNFLHNVSLEGAERFLDSVSVFTRLTKQSLYTPAFRAQLKDEGLASARFRFLAGRVHTNDPLDTLLYLDSKTYLPGDILTKVDRMSMAVSLEARAPLLDHKLVEFVTRIPAALKLRGLETKHIFKRAIADFVPAEILHREKQGFGVPIQQWINEQLRAEMHDTLTDARARARGYVEPRYVAQLLSEHERGRRDHATPLWALFMLERWQRAFVDRAAAADAGVGDKQDVRSPGGRAVRAPTGAQRLQDV

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
71 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
72 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
73 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
74 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
75 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
76 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
77 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
78 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
100 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
101 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
102 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
103 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
104 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
105 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
106 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
107 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
108 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
125 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
126 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
127 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
128 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
130 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
131 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
132 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
133 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.8
Metatranscriptomes 0
Isolates 2.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.65
Nodule 0
Rhizoplane 2.75
Rhizosphere 93.41
Stem 0
Stem Tuber 0
Unclassified 0.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10000654 3300005985 Bacteria 69664
2 Ga0070658_10000437 3300005327 Bacteria 36279
3 Ga0070683_100003500 3300005329 Bacteria 12766
4 Ga0070683_100113286 3300005329 Bacteria 2560
5 Ga0070668_100044378 3300005347 Bacteria 3411
6 Ga0070669_100021752 3300005353 Bacteria 4585
7 Ga0070675_100000577 3300005354 Bacteria 25135
8 Ga0070675_100044649 3300005354 Bacteria 3624
9 Ga0070688_100028009 3300005365 Bacteria 3359
10 Ga0070705_100004692 3300005440 Bacteria 6656
11 Ga0070708_100000505 3300005445 Bacteria 29362
12 Ga0070662_100058065 3300005457 Bacteria 2815
13 Ga0070662_100082904 3300005457 Bacteria 2392
14 Ga0070706_100034671 3300005467 Bacteria 4662
15 Ga0070707_100024534 3300005468 Bacteria 5713
16 Ga0070707_100057527 3300005468 Bacteria 3730
17 Ga0070707_100083324 3300005468 Bacteria 3090
18 Ga0070699_100000185 3300005518 Bacteria 60797
19 Ga0070699_100000341 3300005518 Bacteria 45193
20 Ga0070699_100013052 3300005518 Bacteria 7160
21 Ga0070697_100035776 3300005536 Bacteria 4008
22 Ga0070686_100000275 3300005544 Bacteria 35093
23 Ga0070695_100026662 3300005545 Bacteria 3577
24 Ga0070665_100050098 3300005548 Bacteria 4190
25 Ga0070665_100056002 3300005548 Bacteria 3954
26 Ga0070704_100000046 3300005549 Bacteria 40209
27 Ga0068857_100000231 3300005577 Bacteria 37351
28 Ga0081539_10004358 3300005985 Bacteria 15778
29 Ga0075367_10001085 3300006178 Bacteria 11219
30 Ga0068871_100017360 3300006358 Bacteria 5443
31 Ga0075428_100005520 3300006844 Bacteria 14062
32 Ga0075428_100012199 3300006844 Bacteria 9556
33 Ga0075430_100000964 3300006846 Bacteria 22702
34 Ga0075430_100010272 3300006846 Bacteria 7927
35 Ga0075431_100009439 3300006847 Bacteria 9795
36 Ga0075433_10003669 3300006852 Bacteria 11871
37 Ga0075433_10005039 3300006852 Bacteria 10354
38 Ga0075433_10010772 3300006852 Bacteria 7353
39 Ga0075434_100000555 3300006871 Bacteria 28615
40 Ga0075434_100041509 3300006871 Bacteria 4558
41 Ga0075434_100149529 3300006871 Bacteria 2355
42 Ga0075434_100178699 3300006871 Bacteria 2142
43 Ga0075429_100006675 3300006880 Bacteria 10006
44 Ga0075429_100030943 3300006880 Bacteria 4651
45 Ga0075436_100014569 3300006914 Bacteria 5387
46 Ga0075435_100000320 3300007076 Bacteria 29604
47 Ga0075435_100001526 3300007076 Bacteria 14897
48 Ga0075435_100047330 3300007076 Bacteria 3453
49 Ga0099794_10051569 3300007265 Bacteria 1981
50 Ga0105240_10000710 3300009093 Bacteria 61013
51 Ga0105240_10076213 3300009093 Bacteria 4135
52 Ga0111539_10000353 3300009094 Bacteria 56556
53 Ga0111539_10002012 3300009094 Bacteria 27120
54 Ga0111539_10004857 3300009094 Bacteria 17511
55 Ga0114129_10000151 3300009147 Bacteria 73825
56 Ga0114129_10000943 3300009147 Bacteria 37977
57 Ga0114129_10062848 3300009147 Bacteria 5186
58 Ga0114129_10075882 3300009147 Bacteria 4680
59 Ga0105243_10023791 3300009148 Bacteria 4668
60 Ga0105248_10155027 3300009177 Bacteria 2585
61 Ga0105249_10187815 3300009553 Bacteria 2015
62 Ga0157371_10059601 3300013102 Bacteria 2706
63 Ga0157378_10018061 3300013297 Bacteria 6194
64 Ga0163162_10003031 3300013306 Bacteria 16046
65 Ga0157372_10133753 3300013307 Bacteria 2855
66 Ga0163163_10047132 3300014325 Bacteria 4236
67 Ga0207680_10005835 3300025903 Bacteria 5909
68 Ga0207643_10010111 3300025908 Bacteria 5072
69 Ga0207705_10001875 3300025909 Bacteria 16497
70 Ga0207684_10004803 3300025910 Bacteria 12656
71 Ga0207695_10000363 3300025913 Bacteria 103522
72 Ga0207657_10035736 3300025919 Bacteria 4452
73 Ga0207652_10089348 3300025921 Bacteria 2705
74 Ga0207646_10018815 3300025922 Bacteria 6434
75 Ga0207681_10014439 3300025923 Bacteria 4909
76 Ga0207690_10034256 3300025932 Bacteria 3271
77 Ga0207706_10009211 3300025933 Bacteria 9071
78 Ga0207706_10101509 3300025933 Bacteria 2531
79 Ga0207691_10040794 3300025940 Bacteria 4289
80 Ga0207691_10072092 3300025940 Bacteria 3116
81 Ga0207689_10019929 3300025942 Bacteria 5649
82 Ga0207661_10042991 3300025944 Bacteria 3565
83 Ga0207661_10065185 3300025944 Bacteria 2956
84 Ga0207668_10009330 3300025972 Bacteria 5875
85 Ga0207708_10014616 3300026075 Bacteria 5874
86 Ga0207674_10001034 3300026116 Bacteria 36274
87 Ga0207683_10004029 3300026121 Bacteria 12704
88 Ga0207698_10021866 3300026142 Bacteria 4432
89 Ga0209813_10000519 3300027866 Bacteria 9111
90 Ga0207428_10000103 3300027907 Bacteria 118378
91 Ga0207428_10001110 3300027907 Bacteria 29297
92 Ga0207428_10012819 3300027907 Bacteria 7351
93 Ga0207428_10072385 3300027907 Bacteria 2706
94 Ga0268264_10032465 3300028381 Bacteria 4284
95 Ga0307511_10000650 3300030521 Bacteria 37078
96 Ga0307408_100013981 3300031548 Bacteria 5331
97 Ga0307518_10017128 3300031838 Bacteria 5199
98 Ga0307410_10003615 3300031852 Bacteria 7793
99 Ga0307407_10029657 3300031903 Bacteria 2942
100 Ga0307416_100096276 3300032002 Bacteria 2559
101 Ga0373958_0000268 3300034819 Bacteria 6118
102 Ga0373929_0000319 3300035085 Bacteria 8896
103 Ga0373940_0002907 3300035088 Bacteria 3413
104 Ga0373951_0002158 3300035091 Bacteria 5016
105 Ga0373952_0002527 3300035092 Bacteria 3296
106 Ga0373932_0011667 3300035112 Bacteria 2151
107 Ga0373939_0000472 3300035114 Bacteria 10148
108 Ga0373960_0006256 3300035121 Bacteria 2788
109 Ga0373942_0000566 3300035207 Bacteria 10405
110 Ga0373961_0000365 3300035241 Bacteria 19442
111 Ga0373925_0005986 3300037068 Bacteria 9006
112 Ga0395900_0000284 3300037418 Bacteria 75852
113 Ga0395900_0095370 3300037418 Bacteria 3057
114 Ga0395898_0102948 3300037466 Bacteria 2740
115 Ga0395905_0008115 3300037471 Bacteria 10374
116 Ga0395905_0035804 3300037471 Bacteria 4662
117 Ga0395905_0038037 3300037471 Bacteria 4514
118 Ga0395901_0004544 3300038443 Bacteria 14002
119 Ga0395901_0018325 3300038443 Bacteria 7147
120 Ga0395901_0066868 3300038443 Bacteria 3743
121 Ga0451577_0002208 3300042876 Bacteria 23696
122 Ga0466969_0002790 3300044656 Bacteria 9332
123 Ga0466972_0005160 3300044658 Bacteria 6537
124 Ga0466966_0004367 3300044684 Bacteria 9327
125 Ga0466964_0010490 3300044706 Bacteria 3495
126 Ga0453684_0011967 3300044712 Bacteria 14430
127 Ga0466968_0001165 3300044735 Bacteria 9323
128 Ga0466970_0002251 3300044765 Bacteria 9316
129 Ga0466959_0064943 3300045049 Unclassified 2649
130 Ga0451576_0047468 3300045051 Bacteria 4514
131 Ga0495580_0001030 3300046472 Bacteria 24465
132 Ga0495582_0001508 3300046473 Bacteria 13131
133 Ga0495584_0007423 3300046491 Bacteria 5721
134 Ga0495620_0023736 3300046515 Bacteria 2927
135 Ga0495643_0009303 3300046522 Bacteria 6118
136 Ga0495642_0009001 3300046528 Bacteria 3820
137 Ga0495598_0005687 3300046537 Bacteria 2780
138 Ga0495621_0010281 3300046539 Bacteria 2857
139 Ga0495597_0015679 3300046542 Bacteria 3586
140 Ga0495611_0000079 3300046648 Bacteria 68471
141 Ga0495661_0003855 3300046665 Bacteria 10962
142 Ga0495658_0000916 3300046683 Bacteria 15755
143 Ga0495669_0004261 3300046684 Bacteria 5897
144 Ga0495687_007194 3300047443 Bacteria 6621
145 Ga0496108_0058217 3300048911 Bacteria 3247
146 Ga0496109_0006851 3300048912 Bacteria 9613
147 Ga0496110_0000980 3300048913 Bacteria 20040
148 Ga0496110_0008351 3300048913 Bacteria 8331
149 Ga0496111_0000694 3300048914 Bacteria 17757
150 Ga0501034_0006640 3300049571 Bacteria 12414
151 Ga0501047_0011555 3300049581 Bacteria 8359
152 Ga0501068_0004683 3300049584 Bacteria 7450
153 nmdc:mga05p37_209108_c1 3300050507 Bacteria 2359
154 nmdc:mga05p37_28400_c1 3300050507 Bacteria 6822
155 nmdc:mga05p37_30521_c1 3300050507 Bacteria 6577
156 nmdc:mga05p37_40108_c1 3300050507 Bacteria 5750
157 nmdc:mga05p37_53395_c1 3300050507 Bacteria 4970
158 nmdc:mga09592_105194_c1 3300050508 Bacteria 2420
159 nmdc:mga09592_47493_c1 3300050508 Bacteria 3618
160 nmdc:mga09592_60981_c1 3300050508 Bacteria 3189
161 nmdc:mga0qj67_3373_c1 3300050509 Bacteria 11523
162 nmdc:mga06r32_15784_c1 3300050510 Bacteria 6866
163 nmdc:mga06r32_39291_c1 3300050510 Bacteria 4490
164 nmdc:mga08y16_2260_c1 3300050511 Bacteria 19745
165 nmdc:mga08y16_4371_c1 3300050511 Bacteria 14769
166 nmdc:mga08y16_5757_c1 3300050511 Bacteria 12973
167 nmdc:mga0n895_1176_c1 3300050512 Bacteria 19187
168 nmdc:mga0rr50_3891_c1 3300050513 Bacteria 8691
169 nmdc:mga0rr50_503_c1 3300050513 Bacteria 20812
170 nmdc:mga0a205_1917_c1 3300050515 Bacteria 18073
171 nmdc:mga0a205_2070_c1 3300050515 Bacteria 17545
172 nmdc:mga0a205_313_c1 3300050515 Bacteria 36073
173 Ga0500637_0034728 3300053178 Bacteria 2823
174 Ga0590071_000096 3300059421 Bacteria 24617
175 Ga0590074_000120 3300059423 Bacteria 9137
176 Ga0590075_000171 3300059424 Bacteria 17934
177 Ga0590077_000026 3300059426 Bacteria 34124
178 Ga0530510_0016479 3300061734 Bacteria 5232
179 2587941789 2585428115 Bacteria 4420269
180 2644026268 2643221603 Bacteria 6147767
181 2834645943 2834641062 Bacteria 5559922
182 8003402714 8003400568 Bacteria 5535898
183 Ga0081539_10000654
184 Ga0070658_10000437
185 Ga0070683_100003500
186 Ga0070683_100113286
187 Ga0070668_100044378
188 Ga0070669_100021752
189 Ga0070675_100000577
190 Ga0070675_100044649
191 Ga0070688_100028009
192 Ga0070705_100004692
193 Ga0070708_100000505
194 Ga0070662_100058065
195 Ga0070662_100082904
196 Ga0070706_100034671
197 Ga0070707_100024534
198 Ga0070707_100057527
199 Ga0070707_100083324
200 Ga0070699_100000185
201 Ga0070699_100000341
202 Ga0070699_100013052
203 Ga0070697_100035776
204 Ga0070686_100000275
205 Ga0070695_100026662
206 Ga0070665_100050098
207 Ga0070665_100056002
208 Ga0070704_100000046
209 Ga0068857_100000231
210 Ga0081539_10004358
211 Ga0075367_10001085
212 Ga0068871_100017360
213 Ga0075428_100005520
214 Ga0075428_100012199
215 Ga0075430_100000964
216 Ga0075430_100010272
217 Ga0075431_100009439
218 Ga0075433_10003669
219 Ga0075433_10005039
220 Ga0075433_10010772
221 Ga0075434_100000555
222 Ga0075434_100041509
223 Ga0075434_100149529
224 Ga0075434_100178699
225 Ga0075429_100006675
226 Ga0075429_100030943
227 Ga0075436_100014569
228 Ga0075435_100000320
229 Ga0075435_100001526
230 Ga0075435_100047330
231 Ga0099794_10051569
232 Ga0105240_10000710
233 Ga0105240_10076213
234 Ga0111539_10000353
235 Ga0111539_10002012
236 Ga0111539_10004857
237 Ga0114129_10000151
238 Ga0114129_10000943
239 Ga0114129_10062848
240 Ga0114129_10075882
241 Ga0105243_10023791
242 Ga0105248_10155027
243 Ga0105249_10187815
244 Ga0157371_10059601
245 Ga0157378_10018061
246 Ga0163162_10003031
247 Ga0157372_10133753
248 Ga0163163_10047132
249 Ga0207680_10005835
250 Ga0207643_10010111
251 Ga0207705_10001875
252 Ga0207684_10004803
253 Ga0207695_10000363
254 Ga0207657_10035736
255 Ga0207652_10089348
256 Ga0207646_10018815
257 Ga0207681_10014439
258 Ga0207690_10034256
259 Ga0207706_10009211
260 Ga0207706_10101509
261 Ga0207691_10040794
262 Ga0207691_10072092
263 Ga0207689_10019929
264 Ga0207661_10042991
265 Ga0207661_10065185
266 Ga0207668_10009330
267 Ga0207708_10014616
268 Ga0207674_10001034
269 Ga0207683_10004029
270 Ga0207698_10021866
271 Ga0209813_10000519
272 Ga0207428_10000103
273 Ga0207428_10001110
274 Ga0207428_10012819
275 Ga0207428_10072385
276 Ga0268264_10032465
277 Ga0307511_10000650
278 Ga0307408_100013981
279 Ga0307518_10017128
280 Ga0307410_10003615
281 Ga0307407_10029657
282 Ga0307416_100096276
283 Ga0373958_0000268
284 Ga0373929_0000319
285 Ga0373940_0002907
286 Ga0373951_0002158
287 Ga0373952_0002527
288 Ga0373932_0011667
289 Ga0373939_0000472
290 Ga0373960_0006256
291 Ga0373942_0000566
292 Ga0373961_0000365
293 Ga0373925_0005986
294 Ga0395900_0000284
295 Ga0395900_0095370
296 Ga0395898_0102948
297 Ga0395905_0008115
298 Ga0395905_0035804
299 Ga0395905_0038037
300 Ga0395901_0004544
301 Ga0395901_0018325
302 Ga0395901_0066868
303 Ga0451577_0002208
304 Ga0466969_0002790
305 Ga0466972_0005160
306 Ga0466966_0004367
307 Ga0466964_0010490
308 Ga0453684_0011967
309 Ga0466968_0001165
310 Ga0466970_0002251
311 Ga0466959_0064943
312 Ga0451576_0047468
313 Ga0495580_0001030
314 Ga0495582_0001508
315 Ga0495584_0007423
316 Ga0495620_0023736
317 Ga0495643_0009303
318 Ga0495642_0009001
319 Ga0495598_0005687
320 Ga0495621_0010281
321 Ga0495597_0015679
322 Ga0495611_0000079
323 Ga0495661_0003855
324 Ga0495658_0000916
325 Ga0495669_0004261
326 Ga0495687_007194
327 Ga0496108_0058217
328 Ga0496109_0006851
329 Ga0496110_0000980
330 Ga0496110_0008351
331 Ga0496111_0000694
332 Ga0501034_0006640
333 Ga0501047_0011555
334 Ga0501068_0004683
335 nmdc:mga05p37_209108_c1
336 nmdc:mga05p37_28400_c1
337 nmdc:mga05p37_30521_c1
338 nmdc:mga05p37_40108_c1
339 nmdc:mga05p37_53395_c1
340 nmdc:mga09592_105194_c1
341 nmdc:mga09592_47493_c1
342 nmdc:mga09592_60981_c1
343 nmdc:mga0qj67_3373_c1
344 nmdc:mga06r32_15784_c1
345 nmdc:mga06r32_39291_c1
346 nmdc:mga08y16_2260_c1
347 nmdc:mga08y16_4371_c1
348 nmdc:mga08y16_5757_c1
349 nmdc:mga0n895_1176_c1
350 nmdc:mga0rr50_3891_c1
351 nmdc:mga0rr50_503_c1
352 nmdc:mga0a205_1917_c1
353 nmdc:mga0a205_2070_c1
354 nmdc:mga0a205_313_c1
355 Ga0500637_0034728
356 Ga0590071_000096
357 Ga0590074_000120
358 Ga0590075_000171
359 Ga0590077_000026
360 Ga0530510_0016479
361 2587941789
362 2644026268
363 2834645943
364 8003402714

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13522

GATase_6

Glutamine amidotransferase domain

42

171

0.99

PF13537

GATase_7

Glutamine amidotransferase domain

57

177

0.97

PF00733

Asn_synthase

Asparagine synthase

250

628

0.92

PF12481

DUF3700

Aluminium induced protein

74

180

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ct9-assembly1.cif.gz_A crystal structure of asparagine synthetase b from escherichia coli 0.8409 2 603
1ct9-assembly2.cif.gz_C crystal structure of asparagine synthetase b from escherichia coli 0.8371 2 603
1ct9-assembly1.cif.gz_D crystal structure of asparagine synthetase b from escherichia coli 0.8302 2 603
7ylz-assembly1.cif.gz_A unliganded form of hydroxyamidotransferase tsnb9 0.83 2 601
1ct9-assembly1.cif.gz_A crystal structure of asparagine synthetase b from escherichia coli 0.8214 2 603
ID Description Score Start End Superfamily
af_Q86A01_14_228_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9556 17 211 3.60.20.10
af_P9WN33_15_198_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.948 19 176 3.60.20.10
af_Q58516_3_191_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9245 4 167 3.60.20.10
af_Q7KTW9_18_204_3.60.20.10 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.922 18 218 3.60.20.10
1ct9C01 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.9169 2 222 3.60.20.10
ID Description Score Start End GO Terms
AF-A0A536CGT5-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9855 16 128 GO:0005829
AF-A0A434CPC4-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9842 1 156 GO:0005829
AF-A0A661N6C5-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9803 1 350 GO:0004066
GO:0005524
GO:0005829
GO:0006529
AF-A0A382HGX0-F1-model_v4 Glutamine amidotransferase type-2 domain-containing protein 0.9798 25 200 GO:0005829
AF-A0A0G1XLY7-F1-model_v4 asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) 0.9783 1 302 GO:0004066
GO:0005524
GO:0005829
GO:0006529

Map