F278776

General Info

Members Datasets Scaffolds Average Seq Length
182 132 364 324

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100230047|Ga0070697_1002300471
Length 393
Sequence MTTGQGLSAGRLSATCGLFLGGTLFKWLAFDNRKPLRRLGRTKQLARSPPPTRPRLPAGSLQFAVSSHKLQSMTARLGLGLAALGRPGYVTLNHASDLGGSYDPSVMESHAHAVLDAAFDAGIRYVDAARSYGRAEDFLASWLRKRAIEPGQIVVASKWGYTYTAGWSTSATQHEVKEHSLAAYLRQLDETIERLGPYLSLYQIHSVTAEGKTLDDDALIDAIARLRERGIRAGLTVSGARQDVAIRRSLEVRRDGVRVFDSVQATWNLLERGAESALQDAHDAGMKVVVKESLANGRLTGRGKREDVLFPSVERIGQIAEARRTTIEMLALAAAVARPWADVVLSGAATVGQIQSSVAALELAYDPELEEQLRSIAIDSDKYWRARSSFRWN

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
80 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
98 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
99 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0
Rhizoplane 7.69
Rhizosphere 88.46
Stem 0
Stem Tuber 0
Unclassified 8.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100230047 3300005536 Bacteria 1581
2 JGI25407J50210_10001045 3300003373 Bacteria 6076
3 Ga0065715_10114764 3300005293 Bacteria 2439
4 Ga0065707_10235296 3300005295 Bacteria 1174
5 Ga0070680_100071477 3300005336 Bacteria 2851
6 Ga0070682_100019356 3300005337 Bacteria 3993
7 Ga0070682_100053282 3300005337 Bacteria 2535
8 Ga0070668_100147304 3300005347 Bacteria 1901
9 Ga0070669_100001190 3300005353 Bacteria 18946
10 Ga0070673_100043917 3300005364 Bacteria 3457
11 Ga0070710_10008874 3300005437 Bacteria 4907
12 Ga0070701_10033072 3300005438 Bacteria 2581
13 Ga0070711_100012547 3300005439 Bacteria 5296
14 Ga0070705_100007695 3300005440 Bacteria 5315
15 Ga0070700_100206617 3300005441 Bacteria 1383
16 Ga0070708_100000868 3300005445 Bacteria 22830
17 Ga0070662_100080100 3300005457 Bacteria 2430
18 Ga0070662_100267579 3300005457 Bacteria 1379
19 Ga0070681_10093049 3300005458 Bacteria 2963
20 Ga0070681_10105481 3300005458 Bacteria 2760
21 Ga0070707_100000695 3300005468 Bacteria 33435
22 Ga0070707_100074255 3300005468 Bacteria 3279
23 Ga0070699_100165791 3300005518 Bacteria 1957
24 Ga0070679_100006775 3300005530 Bacteria 10683
25 Ga0070697_100060369 3300005536 Bacteria 3090
26 Ga0070686_100000075 3300005544 Bacteria 72410
27 Ga0070695_100014887 3300005545 Bacteria 4692
28 Ga0070693_100016417 3300005547 Bacteria 3833
29 Ga0070693_100301686 3300005547 Bacteria 1080
30 Ga0070665_100061662 3300005548 Archaea 3760
31 Ga0070664_100006799 3300005564 Bacteria 9220
32 Ga0070664_100502054 3300005564 Bacteria 1118
33 Ga0068857_100004874 3300005577 Bacteria 11387
34 Ga0068857_100008008 3300005577 Bacteria 9115
35 Ga0068859_100081751 3300005617 Bacteria 3273
36 Ga0068870_10008221 3300005840 Bacteria 4683
37 Ga0068858_100230745 3300005842 Bacteria 1755
38 Ga0068862_100000375 3300005844 Bacteria 48427
39 Ga0081455_10022549 3300005937 Bacteria 5883
40 Ga0081538_10000085 3300005981 Bacteria 89830
41 Ga0081538_10000299 3300005981 Bacteria 57017
42 Ga0081538_10029994 3300005981 Bacteria 3702
43 Ga0081538_10045381 3300005981 Bacteria 2725
44 Ga0070712_100011545 3300006175 Bacteria 5605
45 Ga0070712_100153634 3300006175 Bacteria 1770
46 Ga0097621_100579024 3300006237 Bacteria 1024
47 Ga0075428_100004361 3300006844 Bacteria 15613
48 Ga0075431_100059175 3300006847 Unclassified 3954
49 Ga0075431_100075476 3300006847 Bacteria 3479
50 Ga0075433_10046456 3300006852 Bacteria 3776
51 Ga0075434_100001364 3300006871 Bacteria 20503
52 Ga0075434_100007443 3300006871 Bacteria 10126
53 Ga0075434_100026888 3300006871 Bacteria 5644
54 Ga0075434_100080003 3300006871 Bacteria 3264
55 Ga0075436_100101182 3300006914 Bacteria 2007
56 Ga0097620_100081751 3300006931 Bacteria 3273
57 Ga0075435_100076266 3300007076 Bacteria 2747
58 Ga0075435_100137480 3300007076 Bacteria 2048
59 Ga0111539_10072428 3300009094 Bacteria 4063
60 Ga0111539_10116045 3300009094 Bacteria 3139
61 Ga0105245_10144437 3300009098 Bacteria 2244
62 Ga0114129_10068753 3300009147 Bacteria 4938
63 Ga0114129_10857605 3300009147 Unclassified 1154
64 Ga0105243_10404523 3300009148 Bacteria 1269
65 Ga0105249_10006993 3300009553 Bacteria 9845
66 Ga0157369_10577778 3300013105 Bacteria 1161
67 Ga0157372_10019127 3300013307 Bacteria 7374
68 Ga0157380_10004386 3300014326 Bacteria 9781
69 Ga0213874_10000166 3300021377 Bacteria 11761
70 Ga0207643_10011957 3300025908 Bacteria 4687
71 Ga0207707_10059062 3300025912 Bacteria 3337
72 Ga0207707_10115232 3300025912 Bacteria 2348
73 Ga0207693_10002210 3300025915 Bacteria 16961
74 Ga0207663_10010355 3300025916 Bacteria 4960
75 Ga0207663_10374264 3300025916 Bacteria 1084
76 Ga0207660_10151913 3300025917 Bacteria 1780
77 Ga0207662_10004261 3300025918 Bacteria 7505
78 Ga0207646_10010376 3300025922 Bacteria 9109
79 Ga0207646_10048715 3300025922 Bacteria 3797
80 Ga0207664_10180945 3300025929 Bacteria 1810
81 Ga0207644_10138456 3300025931 Bacteria 1872
82 Ga0207706_10026059 3300025933 Bacteria 5235
83 Ga0207691_10011966 3300025940 Bacteria 8322
84 Ga0207679_10022086 3300025945 Bacteria 4327
85 Ga0207651_10023294 3300025960 Bacteria 3806
86 Ga0207677_10182431 3300026023 Unclassified 1652
87 Ga0207703_10025532 3300026035 Bacteria 4646
88 Ga0207639_10163742 3300026041 Bacteria 1877
89 Ga0207708_10102320 3300026075 Bacteria 2218
90 Ga0207702_10158099 3300026078 Bacteria 2068
91 Ga0207648_10017437 3300026089 Bacteria 6533
92 Ga0207674_10001634 3300026116 Bacteria 28842
93 Ga0207674_10006514 3300026116 Bacteria 13728
94 Ga0207428_10107740 3300027907 Bacteria 2146
95 Ga0268266_10046401 3300028379 Bacteria 3720
96 Ga0268265_10001492 3300028380 Bacteria 19602
97 Ga0265320_10008882 3300031240 Bacteria 6108
98 Ga0316579_10001195 3300031691 Bacteria 9294
99 Ga0316576_10000195 3300031727 Bacteria 25247
100 Ga0316578_10019765 3300031728 Unclassified 3714
101 Ga0316577_10030895 3300031733 Bacteria 2992
102 Ga0373959_0008946 3300034820 Bacteria 1717
103 Ga0373941_0003352 3300035115 Bacteria 3621
104 Ga0316574_0058326 3300035398 Unclassified 2418
105 Ga0316574_0064130 3300035398 Bacteria 2311
106 Ga0316574_0088957 3300035398 Unclassified 1967
107 Ga0316584_0050898 3300036712 Unclassified 3097
108 Ga0316584_0329125 3300036712 Archaea 1100
109 Ga0395899_0048510 3300037312 Bacteria 3160
110 Ga0395899_0097485 3300037312 Bacteria 2125
111 Ga0395900_0009376 3300037418 Bacteria 10036
112 Ga0395900_0042148 3300037418 Bacteria 4702
113 Ga0395900_0132469 3300037418 Bacteria 2554
114 Ga0395900_0283232 3300037418 Bacteria 1649
115 Ga0395898_0347496 3300037466 Unclassified 1414
116 Ga0395905_0021607 3300037471 Bacteria 6086
117 Ga0395905_0022147 3300037471 Bacteria 6012
118 Ga0436364_1118800 3300037853 Bacteria 7332
119 Ga0395901_0004806 3300038443 Bacteria 13630
120 Ga0395901_0011290 3300038443 Bacteria 9048
121 Ga0395901_0376021 3300038443 Bacteria 1463
122 Ga0400485_08297 3300038735 Bacteria 4611
123 Ga0400485_17459 3300038735 Bacteria 1610
124 Ga0436365_0153889 3300039437 Bacteria 3752
125 Ga0436360_0152292 3300039438 Bacteria 2350
126 Ga0436363_0198760 3300039450 Bacteria 34031
127 Ga0453684_0576365 3300044712 Unclassified 1236
128 Ga0451576_0344465 3300045051 Bacteria 1560
129 Ga0451576_0521912 3300045051 Bacteria 1248
130 Ga0451576_0576192 3300045051 Unclassified 1183
131 Ga0495651_0050331 3300046462 Bacteria 3214
132 Ga0495653_0027127 3300046463 Bacteria 4586
133 Ga0495596_0101204 3300046500 Bacteria 1119
134 Ga0495608_0079469 3300046511 Bacteria 2132
135 Ga0495618_0178777 3300046514 Bacteria 1349
136 Ga0495652_0007205 3300046529 Bacteria 10268
137 Ga0495667_0013432 3300046559 Bacteria 5544
138 Ga0495657_0181505 3300046675 Bacteria 1291
139 Ga0495604_0013350 3300047317 Bacteria 6542
140 Ga0495680_0039711 3300047322 Bacteria 3752
141 Ga0496102_0090198 3300048905 Bacteria 2837
142 Ga0496103_0228104 3300048906 Bacteria 1198
143 Ga0496105_0172839 3300048908 Bacteria 1771
144 Ga0496105_0235816 3300048908 Bacteria 1486
145 Ga0496107_0220259 3300048910 Bacteria 1412
146 Ga0496108_0064395 3300048911 Bacteria 3088
147 Ga0496108_0139859 3300048911 Bacteria 2086
148 Ga0496109_0085275 3300048912 Bacteria 2915
149 Ga0496111_0275947 3300048914 Bacteria 1247
150 Ga0496112_0028909 3300048915 Bacteria 5356
151 Ga0496112_0338545 3300048915 Bacteria 1448
152 Ga0496113_0028850 3300048916 Bacteria 3997
153 Ga0496113_0232598 3300048916 Bacteria 1470
154 Ga0496115_0018830 3300048918 Bacteria 5308
155 Ga0501034_0060640 3300049571 Bacteria 3800
156 Ga0501042_0303752 3300049578 Bacteria 1153
157 Ga0501071_0071901 3300049587 Unclassified 2522
158 Ga0501071_0233571 3300049587 Bacteria 1386
159 Ga0501075_0184823 3300049591 Unclassified 1590
160 Ga0501075_0219921 3300049591 Bacteria 1449
161 Ga0501076_0015612 3300049592 Bacteria 5744
162 Ga0501076_0288031 3300049592 Bacteria 1346
163 Ga0501079_0019671 3300049741 Bacteria 5156
164 Ga0501080_0023539 3300049742 Bacteria 5708
165 Ga0501081_0035617 3300049743 Bacteria 3389
166 nmdc:mga06z11_302496_c1 3300050494 Unclassified 951
167 nmdc:mga05p37_38691_c1 3300050507 Bacteria 5853
168 nmdc:mga09592_115837_c1 3300050508 Bacteria 2300
169 nmdc:mga09592_180311_c1 3300050508 Bacteria 1827
170 nmdc:mga0qj67_394670_c1 3300050509 Bacteria 1117
171 nmdc:mga06r32_101683_c1 3300050510 Bacteria 2821
172 nmdc:mga06r32_312522_c1 3300050510 Bacteria 1557
173 nmdc:mga08y16_171157_c1 3300050511 Bacteria 2256
174 nmdc:mga08y16_476792_c1 3300050511 Bacteria 1270
175 nmdc:mga0n895_30039_c1 3300050512 Bacteria 5189
176 nmdc:mga0n895_31868_c1 3300050512 Bacteria 5053
177 nmdc:mga0n895_5654_c1 3300050512 Bacteria 10479
178 nmdc:mga0rr50_137526_c1 3300050513 Bacteria 1962
179 nmdc:mga0rr50_3074_c1 3300050513 Bacteria 9550
180 Ga0501082_0195914 3300060353 Unclassified 1758
181 Ga0530510_0007992 3300061734 Bacteria 7379
182 Ga0530510_0177273 3300061734 Unclassified 1580
183 Ga0070697_100230047
184 JGI25407J50210_10001045
185 Ga0065715_10114764
186 Ga0065707_10235296
187 Ga0070680_100071477
188 Ga0070682_100019356
189 Ga0070682_100053282
190 Ga0070668_100147304
191 Ga0070669_100001190
192 Ga0070673_100043917
193 Ga0070710_10008874
194 Ga0070701_10033072
195 Ga0070711_100012547
196 Ga0070705_100007695
197 Ga0070700_100206617
198 Ga0070708_100000868
199 Ga0070662_100080100
200 Ga0070662_100267579
201 Ga0070681_10093049
202 Ga0070681_10105481
203 Ga0070707_100000695
204 Ga0070707_100074255
205 Ga0070699_100165791
206 Ga0070679_100006775
207 Ga0070697_100060369
208 Ga0070686_100000075
209 Ga0070695_100014887
210 Ga0070693_100016417
211 Ga0070693_100301686
212 Ga0070665_100061662
213 Ga0070664_100006799
214 Ga0070664_100502054
215 Ga0068857_100004874
216 Ga0068857_100008008
217 Ga0068859_100081751
218 Ga0068870_10008221
219 Ga0068858_100230745
220 Ga0068862_100000375
221 Ga0081455_10022549
222 Ga0081538_10000085
223 Ga0081538_10000299
224 Ga0081538_10029994
225 Ga0081538_10045381
226 Ga0070712_100011545
227 Ga0070712_100153634
228 Ga0097621_100579024
229 Ga0075428_100004361
230 Ga0075431_100059175
231 Ga0075431_100075476
232 Ga0075433_10046456
233 Ga0075434_100001364
234 Ga0075434_100007443
235 Ga0075434_100026888
236 Ga0075434_100080003
237 Ga0075436_100101182
238 Ga0097620_100081751
239 Ga0075435_100076266
240 Ga0075435_100137480
241 Ga0111539_10072428
242 Ga0111539_10116045
243 Ga0105245_10144437
244 Ga0114129_10068753
245 Ga0114129_10857605
246 Ga0105243_10404523
247 Ga0105249_10006993
248 Ga0157369_10577778
249 Ga0157372_10019127
250 Ga0157380_10004386
251 Ga0213874_10000166
252 Ga0207643_10011957
253 Ga0207707_10059062
254 Ga0207707_10115232
255 Ga0207693_10002210
256 Ga0207663_10010355
257 Ga0207663_10374264
258 Ga0207660_10151913
259 Ga0207662_10004261
260 Ga0207646_10010376
261 Ga0207646_10048715
262 Ga0207664_10180945
263 Ga0207644_10138456
264 Ga0207706_10026059
265 Ga0207691_10011966
266 Ga0207679_10022086
267 Ga0207651_10023294
268 Ga0207677_10182431
269 Ga0207703_10025532
270 Ga0207639_10163742
271 Ga0207708_10102320
272 Ga0207702_10158099
273 Ga0207648_10017437
274 Ga0207674_10001634
275 Ga0207674_10006514
276 Ga0207428_10107740
277 Ga0268266_10046401
278 Ga0268265_10001492
279 Ga0265320_10008882
280 Ga0316579_10001195
281 Ga0316576_10000195
282 Ga0316578_10019765
283 Ga0316577_10030895
284 Ga0373959_0008946
285 Ga0373941_0003352
286 Ga0316574_0058326
287 Ga0316574_0064130
288 Ga0316574_0088957
289 Ga0316584_0050898
290 Ga0316584_0329125
291 Ga0395899_0048510
292 Ga0395899_0097485
293 Ga0395900_0009376
294 Ga0395900_0042148
295 Ga0395900_0132469
296 Ga0395900_0283232
297 Ga0395898_0347496
298 Ga0395905_0021607
299 Ga0395905_0022147
300 Ga0436364_1118800
301 Ga0395901_0004806
302 Ga0395901_0011290
303 Ga0395901_0376021
304 Ga0400485_08297
305 Ga0400485_17459
306 Ga0436365_0153889
307 Ga0436360_0152292
308 Ga0436363_0198760
309 Ga0453684_0576365
310 Ga0451576_0344465
311 Ga0451576_0521912
312 Ga0451576_0576192
313 Ga0495651_0050331
314 Ga0495653_0027127
315 Ga0495596_0101204
316 Ga0495608_0079469
317 Ga0495618_0178777
318 Ga0495652_0007205
319 Ga0495667_0013432
320 Ga0495657_0181505
321 Ga0495604_0013350
322 Ga0495680_0039711
323 Ga0496102_0090198
324 Ga0496103_0228104
325 Ga0496105_0172839
326 Ga0496105_0235816
327 Ga0496107_0220259
328 Ga0496108_0064395
329 Ga0496108_0139859
330 Ga0496109_0085275
331 Ga0496111_0275947
332 Ga0496112_0028909
333 Ga0496112_0338545
334 Ga0496113_0028850
335 Ga0496113_0232598
336 Ga0496115_0018830
337 Ga0501034_0060640
338 Ga0501042_0303752
339 Ga0501071_0071901
340 Ga0501071_0233571
341 Ga0501075_0184823
342 Ga0501075_0219921
343 Ga0501076_0015612
344 Ga0501076_0288031
345 Ga0501079_0019671
346 Ga0501080_0023539
347 Ga0501081_0035617
348 nmdc:mga06z11_302496_c1
349 nmdc:mga05p37_38691_c1
350 nmdc:mga09592_115837_c1
351 nmdc:mga09592_180311_c1
352 nmdc:mga0qj67_394670_c1
353 nmdc:mga06r32_101683_c1
354 nmdc:mga06r32_312522_c1
355 nmdc:mga08y16_171157_c1
356 nmdc:mga08y16_476792_c1
357 nmdc:mga0n895_30039_c1
358 nmdc:mga0n895_31868_c1
359 nmdc:mga0n895_5654_c1
360 nmdc:mga0rr50_137526_c1
361 nmdc:mga0rr50_3074_c1
362 Ga0501082_0195914
363 Ga0530510_0007992
364 Ga0530510_0177273

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

76

378

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4exb-assembly1.cif.gz_A putative aldo-keto reductase from pseudomona aeruginosa 0.8603 4 303
4exb-assembly2.cif.gz_C putative aldo-keto reductase from pseudomona aeruginosa 0.8485 4 303
4exa-assembly1.cif.gz_B crystal structure of the pa4992, the putative aldo-keto reductase from pseudomona aeruginosa 0.8396 4 303
4exb-assembly1.cif.gz_B putative aldo-keto reductase from pseudomona aeruginosa 0.8368 1 303
4otk-assembly1.cif.gz_A a structural characterization of the isoniazid mycobacterium tuberculosis drug target, rv2971, in its unliganded form 0.8359 4 308
ID Description Score Start End Superfamily
af_Q0ITF8_4_186_3.40.50.200 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidase S8/S53 domain 0.8398 186 229 3.40.50.200
af_P30863_1_265_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8345 17 309 3.20.20.100
af_Q2G2T8_4_275_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.833 6 309 3.20.20.100
3up8A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8303 8 308 3.20.20.100
4exaF00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8283 4 294 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A538FKR6-F1-model_v4 Aldo/keto reductase 0.9926 6 290 GO:0016491
AF-A0A538DJX0-F1-model_v4 Aldo/keto reductase 0.9915 51 323 GO:0016491
AF-A0A399Z6Q2-F1-model_v4 Aldo/keto reductase 0.989 6 323
AF-A0A538KZ08-F1-model_v4 Aldo/keto reductase 0.9872 79 323 GO:0016491
AF-A0A1Q7WIQ2-F1-model_v4 Aldo/keto reductase 0.9866 6 323

Map