F277619

General Info

Members Datasets Scaffolds Average Seq Length
181 140 181 211

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100177629|Ga0307408_1001776292
Length 256
Sequence MPANLTRHAVQRQVACRQPSRKLQALLALSLEKPVEEGSPMAKMRLFGEPGWGSVIVEAQLDWYGLEYDFERVGDLFKSTAVESAEARQRLAAVNPLAQIPTLVLANGDVLTESAAITLWLAESEKADSLVPRAGDAARTPFLRWLVFLVANVYPTYTYGDDPARFVAGEGAQGSFREHVDAYRNKLYSLLETVAGAPWFLGARFSALDIYVCAMTRWRPRREWFAAHAPKLAAIAARTQQRPELAACWRRNSGNG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
84 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
85 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
96 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
122 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
125 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
129 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
130 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
131 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
132 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
133 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
134 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
137 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
138 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.9
Metatranscriptomes 1.1
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.13
Nodule 0
Rhizoplane 0.55
Rhizosphere 80.11
Stem 0
Stem Tuber 0
Unclassified 2.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10152323 3300005327 Bacteria 1936
2 Ga0070683_100075141 3300005329 Bacteria 3157
3 Ga0070666_10688979 3300005335 Bacteria 749
4 Ga0070660_100311061 3300005339 Bacteria 1293
5 Ga0070687_100091398 3300005343 Bacteria 1684
6 Ga0070675_100427241 3300005354 Bacteria 1185
7 Ga0070671_100016275 3300005355 Bacteria 6015
8 Ga0070674_100247802 3300005356 Bacteria 1398
9 Ga0070674_100483384 3300005356 Unclassified 1028
10 Ga0070667_100264492 3300005367 Bacteria 1541
11 Ga0070714_100616064 3300005435 Unclassified 1043
12 Ga0070713_100049603 3300005436 Bacteria 3463
13 Ga0070701_10010098 3300005438 Bacteria 4163
14 Ga0070700_100021979 3300005441 Bacteria 3714
15 Ga0070678_100633515 3300005456 Bacteria 958
16 Ga0070706_100029373 3300005467 Bacteria 5065
17 Ga0070698_100017811 3300005471 Bacteria 7482
18 Ga0070684_100113024 3300005535 Bacteria 2436
19 Ga0070697_100061465 3300005536 Bacteria 3064
20 Ga0070672_100296724 3300005543 Bacteria 1369
21 Ga0070672_100467182 3300005543 Bacteria 1088
22 Ga0070665_100196050 3300005548 Bacteria 2020
23 Ga0070665_100374755 3300005548 Bacteria 1430
24 Ga0070704_100288562 3300005549 Bacteria 1362
25 Ga0068855_100017515 3300005563 Bacteria 8615
26 Ga0068855_100425676 3300005563 Bacteria 1451
27 Ga0068855_100541715 3300005563 Bacteria 1261
28 Ga0068857_100094253 3300005577 Bacteria 2681
29 Ga0068856_100049958 3300005614 Bacteria 4122
30 Ga0068852_100047787 3300005616 Bacteria 3653
31 Ga0068859_100042381 3300005617 Bacteria 4572
32 Ga0068859_100492158 3300005617 Bacteria 1321
33 Ga0068861_100001878 3300005719 Bacteria 13529
34 Ga0068863_100773722 3300005841 Bacteria 956
35 Ga0068862_100069025 3300005844 Bacteria 3050
36 Ga0081455_10002099 3300005937 Bacteria 23756
37 Ga0081455_10016921 3300005937 Bacteria 7010
38 Ga0081455_10028405 3300005937 Bacteria 5111
39 Ga0081455_10238192 3300005937 Bacteria 1339
40 Ga0081455_10588974 3300005937 Bacteria 727
41 Ga0081538_10104535 3300005981 Bacteria 1413
42 Ga0081539_10008368 3300005985 Bacteria 9037
43 Ga0070717_10088669 3300006028 Bacteria 2608
44 Ga0075365_10045165 3300006038 Bacteria 2889
45 Ga0075365_10172681 3300006038 Bacteria 1509
46 Ga0075364_10246939 3300006051 Bacteria 1213
47 Ga0075362_10016869 3300006177 Bacteria 2999
48 Ga0075362_10117523 3300006177 Bacteria 1256
49 Ga0075362_10130159 3300006177 Bacteria 1196
50 Ga0075367_10059357 3300006178 Bacteria 2277
51 Ga0075367_10159893 3300006178 Bacteria 1400
52 Ga0075367_10413355 3300006178 Bacteria 854
53 Ga0075369_10000494 3300006186 Bacteria 12240
54 Ga0075369_10011366 3300006186 Bacteria 3502
55 Ga0075369_10149744 3300006186 Bacteria 1066
56 Ga0075370_10363524 3300006353 Bacteria 865
57 Ga0075428_100046430 3300006844 Bacteria 4771
58 Ga0075429_100021083 3300006880 Bacteria 5651
59 Ga0097620_100042380 3300006931 Bacteria 4572
60 Ga0097620_100492164 3300006931 Bacteria 1321
61 Ga0075435_100703388 3300007076 Bacteria 878
62 Ga0099795_10026444 3300007788 Bacteria 1955
63 Ga0105240_10386036 3300009093 Bacteria 1580
64 Ga0111539_10090493 3300009094 Bacteria 3596
65 Ga0111539_10500587 3300009094 Bacteria 1415
66 Ga0111539_10923116 3300009094 Bacteria 1015
67 Ga0105245_10111231 3300009098 Bacteria 2547
68 Ga0114129_11161081 3300009147 Bacteria 964
69 Ga0105243_10050458 3300009148 Bacteria 3287
70 Ga0105242_11068939 3300009176 Bacteria 819
71 Ga0105248_11498257 3300009177 Bacteria 764
72 Ga0105237_11023952 3300009545 Bacteria 832
73 Ga0105246_10433292 3300011119 Bacteria 1100
74 Ga0157373_10625841 3300013100 Bacteria 785
75 Ga0157370_10093411 3300013104 Bacteria 2823
76 Ga0157370_10284643 3300013104 Bacteria 1527
77 Ga0157369_10172160 3300013105 Bacteria 2281
78 Ga0157369_10834417 3300013105 Unclassified 946
79 Ga0157372_10269284 3300013307 Bacteria 1979
80 Ga0157380_10025525 3300014326 Bacteria 4481
81 Ga0213872_10075225 3300021361 Bacteria 1520
82 Ga0213876_10003350 3300021384 Bacteria 9169
83 Ga0207705_10040198 3300025909 Bacteria 3353
84 Ga0207684_10263462 3300025910 Bacteria 1487
85 Ga0207660_10128261 3300025917 Bacteria 1928
86 Ga0207644_10059859 3300025931 Bacteria 2755
87 Ga0207690_10376096 3300025932 Bacteria 1128
88 Ga0207709_10033795 3300025935 Bacteria 3007
89 Ga0207670_10341902 3300025936 Bacteria 1183
90 Ga0207669_10606657 3300025937 Unclassified 890
91 Ga0207665_10211386 3300025939 Bacteria 1417
92 Ga0207689_10024790 3300025942 Bacteria 5029
93 Ga0207667_10100409 3300025949 Bacteria 2985
94 Ga0207667_10228632 3300025949 Bacteria 1905
95 Ga0207667_10445718 3300025949 Bacteria 1316
96 Ga0207708_10027925 3300026075 Bacteria 4272
97 Ga0207641_11379705 3300026088 Bacteria 706
98 Ga0207648_10972417 3300026089 Bacteria 795
99 Ga0207674_10037228 3300026116 Bacteria 5063
100 Ga0207674_10142050 3300026116 Bacteria 2360
101 Ga0207674_10496165 3300026116 Bacteria 1180
102 Ga0207675_100008145 3300026118 Bacteria 9878
103 Ga0207683_10655625 3300026121 Bacteria 972
104 Ga0207698_10087290 3300026142 Bacteria 2540
105 Ga0207428_10093881 3300027907 Bacteria 2327
106 Ga0268266_10020097 3300028379 Bacteria 5692
107 Ga0268265_10058509 3300028380 Bacteria 2943
108 Ga0268264_10213092 3300028381 Bacteria 1774
109 Ga0265334_10005981 3300028573 Bacteria 5292
110 Ga0265763_1013460 3300030763 Unclassified 792
111 Ga0265760_10063863 3300031090 Bacteria 1122
112 Ga0265340_10078512 3300031247 Bacteria 1557
113 Ga0265316_10213842 3300031344 Bacteria 1425
114 Ga0307408_100177629 3300031548 Bacteria 1705
115 Ga0307408_100358366 3300031548 Bacteria 1240
116 Ga0307413_10018164 3300031824 Bacteria 3683
117 Ga0307410_10198056 3300031852 Unclassified 1532
118 Ga0307412_10277891 3300031911 Bacteria 1313
119 Ga0307409_100572844 3300031995 Bacteria 1112
120 Ga0307415_100947332 3300032126 Bacteria 797
121 Ga0373932_0017400 3300035112 Bacteria 1845
122 Ga0373960_0080706 3300035121 Bacteria 1024
123 Ga0373931_0015890 3300035691 Bacteria 3697
124 Ga0373937_0297250 3300036401 Bacteria 1526
125 Ga0373925_0328916 3300037068 Bacteria 1238
126 Ga0395899_0050331 3300037312 Bacteria 3093
127 Ga0395900_0046274 3300037418 Bacteria 4480
128 Ga0395900_0063907 3300037418 Bacteria 3783
129 Ga0395900_0258633 3300037418 Bacteria 1739
130 Ga0395898_0019247 3300037466 Bacteria 6950
131 Ga0395898_0056802 3300037466 Bacteria 3814
132 Ga0395901_0013024 3300038443 Bacteria 8439
133 Ga0395901_0023776 3300038443 Bacteria 6283
134 Ga0395901_0025925 3300038443 Bacteria 6019
135 Ga0395901_0069177 3300038443 Bacteria 3676
136 Ga0436365_0728148 3300039437 Bacteria 16095
137 Ga0436365_1216564 3300039437 Bacteria 971
138 Ga0436361_0232115 3300039447 Bacteria 2280
139 Ga0436361_0977313 3300039447 Bacteria 3589
140 Ga0439458_0039621 3300042157 Unclassified 1140
141 Ga0451577_0003137 3300042876 Bacteria 18623
142 Ga0466963_0184688 3300044694 Bacteria 1456
143 Ga0453684_0237033 3300044712 Bacteria 2103
144 Ga0466967_0126429 3300045976 Bacteria 2368
145 Ga0496109_0629189 3300048912 Bacteria 1010
146 Ga0496126_0137350 3300048929 Bacteria 2107
147 Ga0501034_0003601 3300049571 Bacteria 17582
148 Ga0501037_0086389 3300049573 Bacteria 2271
149 Ga0501047_0144114 3300049581 Bacteria 2260
150 Ga0501071_0284422 3300049587 Bacteria 1252
151 Ga0501075_0063558 3300049591 Bacteria 2783
152 Ga0501076_0454103 3300049592 Unclassified 1055
153 Ga0501081_0870266 3300049743 Archaea 679
154 Ga0501035_0247272 3300049822 Bacteria 1516
155 Ga0501044_0308502 3300049823 Bacteria 1510
156 Ga0501044_0348158 3300049823 Bacteria 1402
157 Ga0501044_0398648 3300049823 Bacteria 1289
158 nmdc:mga03683_4666_c1 3300050489 Bacteria 4566
159 nmdc:mga03683_525_c1 3300050489 Bacteria 10966
160 nmdc:mga00v17_195164_c1 3300050491 Bacteria 1308
161 nmdc:mga0yw44_54386_c1 3300050492 Bacteria 2433
162 nmdc:mga06z11_334459_c1 3300050494 Bacteria 905
163 nmdc:mga06z11_36165_c1 3300050494 Bacteria 2436
164 nmdc:mga06z11_474213_c1 3300050494 Bacteria 757
165 nmdc:mga07m45_329174_c1 3300050496 Bacteria 888
166 nmdc:mga0qj67_81688_c1 3300050509 Bacteria 2591
167 nmdc:mga08y16_102315_c1 3300050511 Bacteria 2982
168 nmdc:mga08y16_81692_c1 3300050511 Bacteria 3369
169 nmdc:mga0rr50_641394_c1 3300050513 Bacteria 906
170 nmdc:mga08x19_529269_c1 3300050514 Bacteria 833
171 nmdc:mga0a205_84062_c1 3300050515 Bacteria 3074
172 nmdc:mga0sz30_707_c1 3300050516 Bacteria 12257
173 Ga0500643_065629 3300053087 Bacteria 1013
174 Ga0500644_0111493 3300053088 Bacteria 1054
175 Ga0500651_0127151 3300053093 Bacteria 1543
176 Ga0500641_0005189 3300053096 Bacteria 4613
177 Ga0500658_0027798 3300053134 Bacteria 2191
178 Ga0500568_0003403 3300053139 Bacteria 8886
179 Ga0500577_0301431 3300053142 Bacteria 699
180 Ga0500616_0020554 3300053153 Bacteria 3707
181 Ga0500552_000036 3300053733 Bacteria 11659

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006051 Ga0075364_10246939 Ga0075364_102469392 187
2 3300013105 Ga0157369_10834417 Ga0157369_108344171 204
3 3300009093 Ga0105240_10386036 Ga0105240_103860362 206
4 3300021384 Ga0213876_10003350 Ga0213876_100033503 206
5 3300030763 Ga0265763_1013460 Ga0265763_10134601 206
6 3300031090 Ga0265760_10063863 Ga0265760_100638631 206
7 3300039437 Ga0436365_0728148 Ga0436365_0728148_8405_9034 206
8 3300049823 Ga0501044_0308502 Ga0501044_0308502_657_1286 206
9 3300053134 Ga0500658_0027798 Ga0500658_0027798_1493_2122 206
10 3300053139 Ga0500568_0003403 Ga0500568_0003403_4423_5052 206
11 3300005335 Ga0070666_10688979 Ga0070666_106889791 207
12 3300005355 Ga0070671_100016275 Ga0070671_1000162758 207
13 3300005436 Ga0070713_100049603 Ga0070713_1000496034 207
14 3300005543 Ga0070672_100467182 Ga0070672_1004671822 207
15 3300005563 Ga0068855_100541715 Ga0068855_1005417152 207
16 3300005841 Ga0068863_100773722 Ga0068863_1007737222 207
17 3300005937 Ga0081455_10016921 Ga0081455_100169218 207
18 3300005937 Ga0081455_10588974 Ga0081455_105889741 207
19 3300006028 Ga0070717_10088669 Ga0070717_100886695 207
20 3300007788 Ga0099795_10026444 Ga0099795_100264442 207
21 3300025931 Ga0207644_10059859 Ga0207644_100598593 207
22 3300025949 Ga0207667_10445718 Ga0207667_104457182 207
23 3300026088 Ga0207641_11379705 Ga0207641_113797051 207
24 3300028381 Ga0268264_10213092 Ga0268264_102130922 207
25 3300028573 Ga0265334_10005981 Ga0265334_100059812 207
26 3300031247 Ga0265340_10078512 Ga0265340_100785121 207
27 3300035112 Ga0373932_0017400 Ga0373932_0017400_126_749 207
28 3300035691 Ga0373931_0015890 Ga0373931_0015890_1036_1659 207
29 3300036401 Ga0373937_0297250 Ga0373937_0297250_211_834 207
30 3300037068 Ga0373925_0328916 Ga0373925_0328916_106_729 207
31 3300039437 Ga0436365_1216564 Ga0436365_1216564_333_956 207
32 3300039447 Ga0436361_0232115 Ga0436361_0232115_131_787 207
33 3300044694 Ga0466963_0184688 Ga0466963_0184688_628_1251 207
34 3300049573 Ga0501037_0086389 Ga0501037_0086389_418_1071 207
35 3300049581 Ga0501047_0144114 Ga0501047_0144114_441_1094 207
36 3300049822 Ga0501035_0247272 Ga0501035_0247272_565_1218 207
37 3300049823 Ga0501044_0398648 Ga0501044_0398648_621_1274 207
38 3300005435 Ga0070714_100616064 Ga0070714_1006160642 208
39 3300005467 Ga0070706_100029373 Ga0070706_1000293737 208
40 3300005471 Ga0070698_100017811 Ga0070698_1000178115 208
41 3300005536 Ga0070697_100061465 Ga0070697_1000614655 208
42 3300005577 Ga0068857_100094253 Ga0068857_1000942532 208
43 3300005937 Ga0081455_10028405 Ga0081455_100284056 208
44 3300006038 Ga0075365_10045165 Ga0075365_100451651 208
45 3300006177 Ga0075362_10016869 Ga0075362_100168695 208
46 3300006178 Ga0075367_10413355 Ga0075367_104133552 208
47 3300006186 Ga0075369_10011366 Ga0075369_100113665 208
48 3300009098 Ga0105245_10111231 Ga0105245_101112313 208
49 3300009176 Ga0105242_11068939 Ga0105242_110689391 208
50 3300009177 Ga0105248_11498257 Ga0105248_114982571 208
51 3300025910 Ga0207684_10263462 Ga0207684_102634622 208
52 3300025936 Ga0207670_10341902 Ga0207670_103419022 208
53 3300026116 Ga0207674_10037228 Ga0207674_100372284 208
54 3300042157 Ga0439458_0039621 Ga0439458_0039621_237_932 208
55 3300048912 Ga0496109_0629189 Ga0496109_0629189_122_760 208
56 3300048929 Ga0496126_0137350 Ga0496126_0137350_961_1593 208
57 3300050489 nmdc:mga03683_4666_c1 nmdc:mga03683_4666_c1_3731_4363 208
58 3300050494 nmdc:mga06z11_474213_c1 nmdc:mga06z11_474213_c1_42_671 208
59 3300050514 nmdc:mga08x19_529269_c1 nmdc:mga08x19_529269_c1_26_655 208
60 3300053087 Ga0500643_065629 Ga0500643_065629_101_730 208
61 3300053088 Ga0500644_0111493 Ga0500644_0111493_49_678 208
62 3300005327 Ga0070658_10152323 Ga0070658_101523233 209
63 3300005329 Ga0070683_100075141 Ga0070683_1000751415 209
64 3300005339 Ga0070660_100311061 Ga0070660_1003110612 209
65 3300005343 Ga0070687_100091398 Ga0070687_1000913983 209
66 3300005354 Ga0070675_100427241 Ga0070675_1004272412 209
67 3300005356 Ga0070674_100247802 Ga0070674_1002478022 209
68 3300005356 Ga0070674_100483384 Ga0070674_1004833842 209
69 3300005367 Ga0070667_100264492 Ga0070667_1002644922 209
70 3300005438 Ga0070701_10010098 Ga0070701_100100983 209
71 3300005441 Ga0070700_100021979 Ga0070700_1000219794 209
72 3300005456 Ga0070678_100633515 Ga0070678_1006335152 209
73 3300005535 Ga0070684_100113024 Ga0070684_1001130243 209
74 3300005543 Ga0070672_100296724 Ga0070672_1002967241 209
75 3300005548 Ga0070665_100196050 Ga0070665_1001960502 209
76 3300005548 Ga0070665_100374755 Ga0070665_1003747552 209
77 3300005549 Ga0070704_100288562 Ga0070704_1002885622 209
78 3300005563 Ga0068855_100017515 Ga0068855_1000175152 209
79 3300005563 Ga0068855_100425676 Ga0068855_1004256763 209
80 3300005614 Ga0068856_100049958 Ga0068856_1000499585 209
81 3300005616 Ga0068852_100047787 Ga0068852_1000477874 209
82 3300005617 Ga0068859_100042381 Ga0068859_1000423812 209
83 3300005617 Ga0068859_100492158 Ga0068859_1004921582 209
84 3300005719 Ga0068861_100001878 Ga0068861_10000187813 209
85 3300005844 Ga0068862_100069025 Ga0068862_1000690253 209
86 3300005937 Ga0081455_10002099 Ga0081455_100020992 209
87 3300005937 Ga0081455_10238192 Ga0081455_102381922 209
88 3300005981 Ga0081538_10104535 Ga0081538_101045352 209
89 3300005985 Ga0081539_10008368 Ga0081539_100083687 209
90 3300006038 Ga0075365_10172681 Ga0075365_101726812 209
91 3300006177 Ga0075362_10117523 Ga0075362_101175232 209
92 3300006177 Ga0075362_10130159 Ga0075362_101301592 209
93 3300006178 Ga0075367_10059357 Ga0075367_100593572 209
94 3300006178 Ga0075367_10159893 Ga0075367_101598932 209
95 3300006186 Ga0075369_10000494 Ga0075369_1000049415 209
96 3300006186 Ga0075369_10149744 Ga0075369_101497442 209
97 3300006353 Ga0075370_10363524 Ga0075370_103635241 209
98 3300006844 Ga0075428_100046430 Ga0075428_1000464304 209
99 3300006880 Ga0075429_100021083 Ga0075429_1000210835 209
100 3300006931 Ga0097620_100042380 Ga0097620_1000423802 209
101 3300006931 Ga0097620_100492164 Ga0097620_1004921642 209
102 3300007076 Ga0075435_100703388 Ga0075435_1007033881 209
103 3300009094 Ga0111539_10090493 Ga0111539_100904933 209
104 3300009094 Ga0111539_10500587 Ga0111539_105005872 209
105 3300009094 Ga0111539_10923116 Ga0111539_109231162 209
106 3300009147 Ga0114129_11161081 Ga0114129_111610812 209
107 3300009148 Ga0105243_10050458 Ga0105243_100504582 209
108 3300009545 Ga0105237_11023952 Ga0105237_110239522 209
109 3300011119 Ga0105246_10433292 Ga0105246_104332921 209
110 3300013100 Ga0157373_10625841 Ga0157373_106258411 209
111 3300013104 Ga0157370_10093411 Ga0157370_100934112 209
112 3300013104 Ga0157370_10284643 Ga0157370_102846431 209
113 3300013105 Ga0157369_10172160 Ga0157369_101721603 209
114 3300013307 Ga0157372_10269284 Ga0157372_102692842 209
115 3300014326 Ga0157380_10025525 Ga0157380_100255252 209
116 3300021361 Ga0213872_10075225 Ga0213872_100752251 209
117 3300025909 Ga0207705_10040198 Ga0207705_100401984 209
118 3300025917 Ga0207660_10128261 Ga0207660_101282611 209
119 3300025932 Ga0207690_10376096 Ga0207690_103760962 209
120 3300025935 Ga0207709_10033795 Ga0207709_100337953 209
121 3300025937 Ga0207669_10606657 Ga0207669_106066572 209
122 3300025939 Ga0207665_10211386 Ga0207665_102113862 209
123 3300025942 Ga0207689_10024790 Ga0207689_100247905 209
124 3300025949 Ga0207667_10100409 Ga0207667_101004092 209
125 3300025949 Ga0207667_10228632 Ga0207667_102286322 209
126 3300026075 Ga0207708_10027925 Ga0207708_100279255 209
127 3300026089 Ga0207648_10972417 Ga0207648_109724171 209
128 3300026116 Ga0207674_10142050 Ga0207674_101420502 209
129 3300026116 Ga0207674_10496165 Ga0207674_104961652 209
130 3300026118 Ga0207675_100008145 Ga0207675_1000081457 209
131 3300026121 Ga0207683_10655625 Ga0207683_106556252 209
132 3300026142 Ga0207698_10087290 Ga0207698_100872904 209
133 3300027907 Ga0207428_10093881 Ga0207428_100938813 209
134 3300028379 Ga0268266_10020097 Ga0268266_100200978 209
135 3300028380 Ga0268265_10058509 Ga0268265_100585093 209
136 3300031344 Ga0265316_10213842 Ga0265316_102138422 209
137 3300031548 Ga0307408_100177629 Ga0307408_1001776292 209
138 3300031548 Ga0307408_100358366 Ga0307408_1003583662 209
139 3300031824 Ga0307413_10018164 Ga0307413_100181643 209
140 3300031852 Ga0307410_10198056 Ga0307410_101980562 209
141 3300031911 Ga0307412_10277891 Ga0307412_102778912 209
142 3300031995 Ga0307409_100572844 Ga0307409_1005728441 209
143 3300032126 Ga0307415_100947332 Ga0307415_1009473321 209
144 3300035121 Ga0373960_0080706 Ga0373960_0080706_140_775 209
145 3300037312 Ga0395899_0050331 Ga0395899_0050331_1118_1753 209
146 3300037418 Ga0395900_0046274 Ga0395900_0046274_822_1454 209
147 3300037418 Ga0395900_0063907 Ga0395900_0063907_2601_3236 209
148 3300037418 Ga0395900_0258633 Ga0395900_0258633_356_988 209
149 3300037466 Ga0395898_0019247 Ga0395898_0019247_6124_6756 209
150 3300037466 Ga0395898_0056802 Ga0395898_0056802_1513_2145 209
151 3300038443 Ga0395901_0013024 Ga0395901_0013024_6704_7336 209
152 3300038443 Ga0395901_0023776 Ga0395901_0023776_5500_6132 209
153 3300038443 Ga0395901_0025925 Ga0395901_0025925_1614_2249 209
154 3300038443 Ga0395901_0069177 Ga0395901_0069177_2756_3388 209
155 3300039447 Ga0436361_0977313 Ga0436361_0977313_79_714 209
156 3300042876 Ga0451577_0003137 Ga0451577_0003137_10138_10773 209
157 3300044712 Ga0453684_0237033 Ga0453684_0237033_954_1589 209
158 3300045976 Ga0466967_0126429 Ga0466967_0126429_178_810 209
159 3300049571 Ga0501034_0003601 Ga0501034_0003601_3510_4145 209
160 3300049587 Ga0501071_0284422 Ga0501071_0284422_20_655 209
161 3300049591 Ga0501075_0063558 Ga0501075_0063558_243_875 209
162 3300049592 Ga0501076_0454103 Ga0501076_0454103_277_909 209
163 3300049743 Ga0501081_0870266 Ga0501081_0870266_30_662 209
164 3300049823 Ga0501044_0348158 Ga0501044_0348158_96_734 209
165 3300050489 nmdc:mga03683_525_c1 nmdc:mga03683_525_c1_4015_4650 209
166 3300050491 nmdc:mga00v17_195164_c1 nmdc:mga00v17_195164_c1_429_1064 209
167 3300050492 nmdc:mga0yw44_54386_c1 nmdc:mga0yw44_54386_c1_507_1142 209
168 3300050494 nmdc:mga06z11_334459_c1 nmdc:mga06z11_334459_c1_188_823 209
169 3300050494 nmdc:mga06z11_36165_c1 nmdc:mga06z11_36165_c1_906_1541 209
170 3300050496 nmdc:mga07m45_329174_c1 nmdc:mga07m45_329174_c1_133_762 209
171 3300050509 nmdc:mga0qj67_81688_c1 nmdc:mga0qj67_81688_c1_664_1296 209
172 3300050511 nmdc:mga08y16_102315_c1 nmdc:mga08y16_102315_c1_2065_2700 209
173 3300050511 nmdc:mga08y16_81692_c1 nmdc:mga08y16_81692_c1_1241_1873 209
174 3300050513 nmdc:mga0rr50_641394_c1 nmdc:mga0rr50_641394_c1_201_836 209
175 3300050515 nmdc:mga0a205_84062_c1 nmdc:mga0a205_84062_c1_1650_2285 209
176 3300050516 nmdc:mga0sz30_707_c1 nmdc:mga0sz30_707_c1_278_913 209
177 3300053093 Ga0500651_0127151 Ga0500651_0127151_45_680 209
178 3300053096 Ga0500641_0005189 Ga0500641_0005189_2262_2897 209
179 3300053142 Ga0500577_0301431 Ga0500577_0301431_60_689 209
180 3300053153 Ga0500616_0020554 Ga0500616_0020554_275_910 209
181 3300053733 Ga0500552_000036 Ga0500552_000036_9367_9996 209

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

56

124

0.82

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

57

129

0.75

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

42

123

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gf0-assembly1.cif.gz_A crystal structure of glutahtione transferase homolog from sulfitobacter, target efi-501084, with bound glutathione 0.8587 1 205
4gf0-assembly1.cif.gz_B crystal structure of glutahtione transferase homolog from sulfitobacter, target efi-501084, with bound glutathione 0.8546 5 205
4gf0-assembly1.cif.gz_A crystal structure of glutahtione transferase homolog from sulfitobacter, target efi-501084, with bound glutathione 0.8394 1 205
1n2a-assembly1.cif.gz_B crystal structure of a bacterial glutathione transferase from escherichia coli with glutathione sulfonate in the active site 0.8391 5 205
4gci-assembly1.cif.gz_B crystal structure of glutahtione s-transferase homolog from yersinia pestis, target efi-501894, with bound glutathione, monoclinic form 0.8386 3 209
ID Description Score Start End Superfamily
4gf0B01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9384 5 81 3.40.30.10
af_P76117_1_80_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9251 4 82 3.40.30.10
af_P76117_1_80_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9036 4 82 3.40.30.10
3lxtA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8979 3 83 3.40.30.10
af_Q9VSL6_6_114_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8672 2 96 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A2N3BBA5-F1-model_v4 Glutathione S-transferase 0.9815 4 139 GO:0016740
AF-A0A1I5GMD4-F1-model_v4 deleted 0.9756 1 209
AF-A0A3N5PNF1-F1-model_v4 Glutathione S-transferase 0.9732 1 148 GO:0016740
AF-A0A0U3AYR3-F1-model_v4 GST N-terminal domain-containing protein 0.968 4 207
AF-A0A2T5FX35-F1-model_v4 Glutathione S-transferase 0.9678 3 207 GO:0016740

Feature Viewer

pLDDT pTM Quality
95.19 0.91 High
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Predicted Structure (AlphaFold2)

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