F277593
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 148 | 169 | 122 |
Family's Representative Sequence
| Representative Sequence | 3300028800|Ga0265338_10391739|Ga0265338_103917392 |
| Length | 143 |
| Sequence | MGNYQSANGEEREAKSETMIAKTSKDQTRQKVHSRIRKKMVGTSERPRLNVYRSTNHIYVQVIDDTKGATLVSATSVEKGKGIKGDKRPTGGNLSAAKEVGKLIADRAKEKGIKKVVFDRGGYLYHGRVKALADAAREAGLEF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2554235469 | Sporolactobacillus laevolacticus DSM 442 | Isolate | Rhizosphere |
| 2 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 3 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 4 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 5 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 6 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 7 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 8 | 2916971899 | Alkalihalobacillus miscanthi AK13 | Isolate | Rhizosphere |
| 9 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 10 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 11 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 12 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 13 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 14 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 15 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 16 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 26 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 31 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 32 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 37 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 38 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 39 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 53 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 54 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 71 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 72 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 73 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 74 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 75 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 76 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 77 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 78 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 79 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 80 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 81 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 83 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 84 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 85 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 86 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 87 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 88 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 89 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 90 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 91 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 92 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 94 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 95 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 96 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 97 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 98 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 99 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 100 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 103 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 104 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 105 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 106 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 107 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 108 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 109 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 110 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 119 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 120 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 122 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 123 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 124 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 125 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 128 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 129 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300059477 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 139 | 3300059490 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 140 | 3300059506 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 141 | 3300059512 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 142 | 3300059623 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 143 | 3300059624 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 144 | 3300059627 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 154R_AW_T3_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 145 | 3300059641 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 146 | 3300060346 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 147 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 8057733483 | Paenibacillus apiarius MW-14 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.08 |
| Metatranscriptomes | 8.29 |
| Isolates | 6.63 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.55 |
| Nodule | 0 |
| Rhizoplane | 5.52 |
| Rhizosphere | 87.29 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.63 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24735J21928_10012565 | 3300002067 | Bacteria | 2674 |
| 2 | Ga0055535_1000913 | 3300003761 | Bacteria | 19960 |
| 3 | Ga0065704_10085506 | 3300005289 | Bacteria | 3195 |
| 4 | Ga0065704_10086296 | 3300005289 | Bacteria | 3134 |
| 5 | Ga0065707_10006204 | 3300005295 | Bacteria | 4061 |
| 6 | Ga0070658_10012380 | 3300005327 | Bacteria | 6848 |
| 7 | Ga0070683_100091543 | 3300005329 | Bacteria | 2856 |
| 8 | Ga0070682_100349885 | 3300005337 | Bacteria | 1101 |
| 9 | Ga0070660_100112276 | 3300005339 | Bacteria | 2169 |
| 10 | Ga0070660_100183833 | 3300005339 | Bacteria | 1692 |
| 11 | Ga0070714_101857082 | 3300005435 | Bacteria | 588 |
| 12 | Ga0070701_10317024 | 3300005438 | Bacteria | 964 |
| 13 | Ga0070700_100190235 | 3300005441 | Bacteria | 1434 |
| 14 | Ga0070706_101546223 | 3300005467 | Bacteria | 606 |
| 15 | Ga0070697_100192911 | 3300005536 | Bacteria | 1729 |
| 16 | Ga0068853_100083191 | 3300005539 | Bacteria | 2804 |
| 17 | Ga0070704_101093732 | 3300005549 | Bacteria | 724 |
| 18 | Ga0068855_100305522 | 3300005563 | Bacteria | 1761 |
| 19 | Ga0070664_100376447 | 3300005564 | Bacteria | 1295 |
| 20 | Ga0068857_100473401 | 3300005577 | Bacteria | 1173 |
| 21 | Ga0068852_101921869 | 3300005616 | Bacteria | 614 |
| 22 | Ga0068861_101716272 | 3300005719 | Bacteria | 621 |
| 23 | Ga0068851_10016351 | 3300005834 | Bacteria | 3549 |
| 24 | Ga0068858_100406819 | 3300005842 | Bacteria | 1308 |
| 25 | Ga0070715_10147275 | 3300006163 | Bacteria | 1150 |
| 26 | Ga0097621_101440513 | 3300006237 | Bacteria | 653 |
| 27 | Ga0068871_100439861 | 3300006358 | Bacteria | 1167 |
| 28 | Ga0075434_102417271 | 3300006871 | Bacteria | 527 |
| 29 | Ga0075436_101145199 | 3300006914 | Unclassified | 586 |
| 30 | Ga0075435_100270141 | 3300007076 | Bacteria | 1450 |
| 31 | Ga0105240_10905558 | 3300009093 | Bacteria | 949 |
| 32 | Ga0105240_11764108 | 3300009093 | Bacteria | 645 |
| 33 | Ga0105247_10416156 | 3300009101 | Bacteria | 961 |
| 34 | Ga0105241_11709624 | 3300009174 | Bacteria | 612 |
| 35 | Ga0105241_12064980 | 3300009174 | Bacteria | 562 |
| 36 | Ga0105242_13189938 | 3300009176 | Bacteria | 509 |
| 37 | Ga0105237_10000018 | 3300009545 | Bacteria | 237291 |
| 38 | Ga0105238_10018549 | 3300009551 | Bacteria | 7083 |
| 39 | Ga0105249_11732441 | 3300009553 | Bacteria | 697 |
| 40 | Ga0157370_10099767 | 3300013104 | Bacteria | 2721 |
| 41 | Ga0157369_10240044 | 3300013105 | Bacteria | 1893 |
| 42 | Ga0157374_10854240 | 3300013296 | Bacteria | 927 |
| 43 | Ga0157378_10207418 | 3300013297 | Bacteria | 1857 |
| 44 | Ga0157378_10738457 | 3300013297 | Unclassified | 1006 |
| 45 | Ga0157376_10132920 | 3300014969 | Bacteria | 2223 |
| 46 | Ga0206356_10501672 | 3300020070 | Bacteria | 1224 |
| 47 | Ga0213875_10003133 | 3300021388 | Bacteria | 9512 |
| 48 | Ga0207656_10041707 | 3300025321 | Bacteria | 1951 |
| 49 | Ga0207705_10011835 | 3300025909 | Bacteria | 6304 |
| 50 | Ga0207695_11698479 | 3300025913 | Bacteria | 512 |
| 51 | Ga0207671_10000714 | 3300025914 | Bacteria | 42588 |
| 52 | Ga0207657_10058322 | 3300025919 | Bacteria | 3322 |
| 53 | Ga0207646_11105499 | 3300025922 | Bacteria | 697 |
| 54 | Ga0207689_10178178 | 3300025942 | Unclassified | 1753 |
| 55 | Ga0207661_10225368 | 3300025944 | Unclassified | 1658 |
| 56 | Ga0207679_11222684 | 3300025945 | Bacteria | 690 |
| 57 | Ga0207667_10379187 | 3300025949 | Bacteria | 1441 |
| 58 | Ga0207703_10477945 | 3300026035 | Bacteria | 1167 |
| 59 | Ga0207639_10132032 | 3300026041 | Bacteria | 2069 |
| 60 | Ga0207708_10019821 | 3300026075 | Bacteria | 5072 |
| 61 | Ga0207674_10305415 | 3300026116 | Bacteria | 1540 |
| 62 | Ga0207675_100339444 | 3300026118 | Unclassified | 1470 |
| 63 | Ga0207698_10527376 | 3300026142 | Bacteria | 1153 |
| 64 | Ga0207428_10497330 | 3300027907 | Bacteria | 886 |
| 65 | Ga0265338_10056619 | 3300028800 | Bacteria | 3475 |
| 66 | Ga0265338_10391739 | 3300028800 | Bacteria | 992 |
| 67 | Ga0265760_10009887 | 3300031090 | Bacteria | 2723 |
| 68 | Ga0265330_10052481 | 3300031235 | Bacteria | 1786 |
| 69 | Ga0265330_10205742 | 3300031235 | Bacteria | 832 |
| 70 | Ga0265340_10005004 | 3300031247 | Bacteria | 7367 |
| 71 | Ga0265340_10007709 | 3300031247 | Bacteria | 5838 |
| 72 | Ga0265339_10132699 | 3300031249 | Bacteria | 1272 |
| 73 | Ga0265339_10298667 | 3300031249 | Bacteria | 768 |
| 74 | Ga0265331_10070317 | 3300031250 | Bacteria | 1639 |
| 75 | Ga0265316_10005065 | 3300031344 | Bacteria | 12933 |
| 76 | Ga0265316_10069538 | 3300031344 | Bacteria | 2717 |
| 77 | Ga0307509_10214463 | 3300031507 | Bacteria | 1746 |
| 78 | Ga0307509_10904931 | 3300031507 | Bacteria | 547 |
| 79 | Ga0265313_10002540 | 3300031595 | Bacteria | 15638 |
| 80 | Ga0265313_10043960 | 3300031595 | Bacteria | 2184 |
| 81 | Ga0316579_10442667 | 3300031691 | Bacteria | 629 |
| 82 | Ga0316579_10601496 | 3300031691 | Unclassified | 532 |
| 83 | Ga0265314_10005272 | 3300031711 | Bacteria | 11699 |
| 84 | Ga0265314_10015736 | 3300031711 | Bacteria | 5993 |
| 85 | Ga0265342_10233200 | 3300031712 | Bacteria | 988 |
| 86 | Ga0316578_10329203 | 3300031728 | Bacteria | 911 |
| 87 | Ga0316577_10005422 | 3300031733 | Bacteria | 6691 |
| 88 | Ga0307413_10513404 | 3300031824 | Bacteria | 965 |
| 89 | Ga0307416_100611551 | 3300032002 | Bacteria | 1171 |
| 90 | Ga0316585_10016871 | 3300032137 | Bacteria | 2202 |
| 91 | Ga0316593_10010257 | 3300032168 | Bacteria | 2679 |
| 92 | Ga0316593_10039245 | 3300032168 | Bacteria | 1570 |
| 93 | Ga0316593_10250418 | 3300032168 | Unclassified | 663 |
| 94 | Ga0316596_1147927 | 3300033541 | Bacteria | 645 |
| 95 | Ga0373955_0285661 | 3300035172 | Bacteria | 993 |
| 96 | Ga0373935_1351482 | 3300035692 | Bacteria | 532 |
| 97 | Ga0373937_0556308 | 3300036401 | Bacteria | 1090 |
| 98 | Ga0316582_0090031 | 3300036647 | Unclassified | 2018 |
| 99 | Ga0316582_0510023 | 3300036647 | Bacteria | 829 |
| 100 | Ga0316582_0564440 | 3300036647 | Bacteria | 784 |
| 101 | Ga0316582_0574698 | 3300036647 | Bacteria | 776 |
| 102 | Ga0316584_0001013 | 3300036712 | Bacteria | 16221 |
| 103 | Ga0316584_0937757 | 3300036712 | Unclassified | 581 |
| 104 | Ga0395899_0021136 | 3300037312 | Bacteria | 4936 |
| 105 | Ga0395900_0130829 | 3300037418 | Bacteria | 2572 |
| 106 | Ga0395898_0184785 | 3300037466 | Bacteria | 1992 |
| 107 | Ga0316581_0129941 | 3300037588 | Bacteria | 777 |
| 108 | Ga0436364_0779753 | 3300037853 | Bacteria | 9870 |
| 109 | Ga0436364_1327080 | 3300037853 | Bacteria | 1002 |
| 110 | Ga0436363_0187355 | 3300039450 | Bacteria | 560 |
| 111 | Ga0451577_0000328 | 3300042876 | Bacteria | 88518 |
| 112 | Ga0451577_0007263 | 3300042876 | Bacteria | 10914 |
| 113 | Ga0451577_1072897 | 3300042876 | Unclassified | 721 |
| 114 | Ga0466969_0001060 | 3300044656 | Bacteria | 14842 |
| 115 | Ga0453683_0575009 | 3300044673 | Bacteria | 734 |
| 116 | Ga0466966_0019231 | 3300044684 | Bacteria | 4495 |
| 117 | Ga0466966_0392169 | 3300044684 | Bacteria | 834 |
| 118 | Ga0466961_0124843 | 3300044693 | Bacteria | 1615 |
| 119 | Ga0453684_0008501 | 3300044712 | Bacteria | 18357 |
| 120 | Ga0453684_0074249 | 3300044712 | Bacteria | 4283 |
| 121 | Ga0453684_1308550 | 3300044712 | Bacteria | 756 |
| 122 | Ga0466957_0362061 | 3300044842 | Bacteria | 986 |
| 123 | Ga0451576_0326156 | 3300045051 | Unclassified | 1607 |
| 124 | Ga0451576_0535801 | 3300045051 | Bacteria | 1230 |
| 125 | Ga0451576_0889698 | 3300045051 | Bacteria | 934 |
| 126 | Ga0451576_1682376 | 3300045051 | Bacteria | 657 |
| 127 | Ga0451576_2287734 | 3300045051 | Bacteria | 554 |
| 128 | Ga0466967_0442850 | 3300045976 | Bacteria | 1269 |
| 129 | Ga0495621_0009062 | 3300046539 | Bacteria | 3007 |
| 130 | Ga0495657_0020015 | 3300046675 | Bacteria | 4819 |
| 131 | Ga0495623_0157794 | 3300046679 | Bacteria | 1336 |
| 132 | Ga0495669_0130833 | 3300046684 | Bacteria | 1181 |
| 133 | Ga0495604_0349795 | 3300047317 | Bacteria | 982 |
| 134 | Ga0495636_0241268 | 3300047318 | Bacteria | 834 |
| 135 | Ga0495602_0017278 | 3300048088 | Bacteria | 7234 |
| 136 | Ga0496102_1686106 | 3300048905 | Bacteria | 552 |
| 137 | Ga0496104_0045605 | 3300048907 | Bacteria | 4124 |
| 138 | Ga0496105_0311061 | 3300048908 | Bacteria | 1265 |
| 139 | Ga0496108_0813419 | 3300048911 | Bacteria | 806 |
| 140 | Ga0496110_0530147 | 3300048913 | Bacteria | 1071 |
| 141 | Ga0496111_1206732 | 3300048914 | Bacteria | 536 |
| 142 | Ga0496112_0010121 | 3300048915 | Bacteria | 8540 |
| 143 | Ga0496113_0189401 | 3300048916 | Bacteria | 1633 |
| 144 | Ga0496114_0491437 | 3300048917 | Bacteria | 1086 |
| 145 | Ga0496116_0078854 | 3300048919 | Bacteria | 2052 |
| 146 | Ga0496122_0037909 | 3300048925 | Bacteria | 3871 |
| 147 | Ga0501298_100340 | 3300049521 | Unclassified | 659 |
| 148 | Ga0501034_0157083 | 3300049571 | Bacteria | 2247 |
| 149 | Ga0501034_0270394 | 3300049571 | Bacteria | 1641 |
| 150 | Ga0501034_0561988 | 3300049571 | Bacteria | 1049 |
| 151 | Ga0501034_0746058 | 3300049571 | Bacteria | 875 |
| 152 | Ga0501069_0170104 | 3300049585 | Bacteria | 1257 |
| 153 | Ga0501071_1205074 | 3300049587 | Unclassified | 585 |
| 154 | Ga0501074_1105042 | 3300049590 | Bacteria | 557 |
| 155 | Ga0501075_0380725 | 3300049591 | Bacteria | 1076 |
| 156 | Ga0501044_1090447 | 3300049823 | Bacteria | 668 |
| 157 | nmdc:mga08y16_36401_c1 | 3300050511 | Bacteria | 5169 |
| 158 | nmdc:mga0rr50_247805_c1 | 3300050513 | Bacteria | 1478 |
| 159 | Ga0501084_0644831 | 3300054114 | Bacteria | 894 |
| 160 | Ga0587084_000126 | 3300059477 | Bacteria | 4366 |
| 161 | Ga0587066_014746 | 3300059490 | Bacteria | 1206 |
| 162 | Ga0587085_001320 | 3300059506 | Bacteria | 2253 |
| 163 | Ga0587092_003221 | 3300059512 | Bacteria | 1834 |
| 164 | Ga0587101_035926 | 3300059623 | Bacteria | 796 |
| 165 | Ga0587109_059584 | 3300059624 | Bacteria | 801 |
| 166 | Ga0587117_009697 | 3300059627 | Bacteria | 1158 |
| 167 | Ga0587068_092404 | 3300059641 | Bacteria | 625 |
| 168 | Ga0587111_0093693 | 3300060346 | Bacteria | 737 |
| 169 | Ga0501082_1274526 | 3300060353 | Bacteria | 642 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300006237 | Ga0097621_101440513 | Ga0097621_1014405132 | 103 |
| 2 | 3300014969 | Ga0157376_10132920 | Ga0157376_101329202 | 103 |
| 3 | 3300005467 | Ga0070706_101546223 | Ga0070706_1015462231 | 105 |
| 4 | 3300035172 | Ga0373955_0285661 | Ga0373955_0285661_632_955 | 107 |
| 5 | 3300048905 | Ga0496102_1686106 | Ga0496102_1686106_32_355 | 107 |
| 6 | 3300049587 | Ga0501071_1205074 | Ga0501071_1205074_33_401 | 110 |
| 7 | 3300046675 | Ga0495657_0020015 | Ga0495657_0020015_3604_3969 | 112 |
| 8 | 3300046679 | Ga0495623_0157794 | Ga0495623_0157794_710_1075 | 112 |
| 9 | 3300047317 | Ga0495604_0349795 | Ga0495604_0349795_560_925 | 112 |
| 10 | 3300048088 | Ga0495602_0017278 | Ga0495602_0017278_2201_2566 | 112 |
| 11 | 3300009176 | Ga0105242_13189938 | Ga0105242_131899381 | 115 |
| 12 | 3300036647 | Ga0316582_0564440 | Ga0316582_0564440_235_582 | 115 |
| 13 | iso_pu_bacteria | 2554235469 | 2556065782 | 116 |
| 14 | iso_pu_bacteria | 2916971899 | 2916972090 | 116 |
| 15 | 3300005329 | Ga0070683_100091543 | Ga0070683_1000915433 | 117 |
| 16 | 3300005337 | Ga0070682_100349885 | Ga0070682_1003498852 | 117 |
| 17 | 3300005339 | Ga0070660_100183833 | Ga0070660_1001838332 | 117 |
| 18 | 3300005564 | Ga0070664_100376447 | Ga0070664_1003764472 | 117 |
| 19 | 3300005577 | Ga0068857_100473401 | Ga0068857_1004734012 | 117 |
| 20 | 3300013104 | Ga0157370_10099767 | Ga0157370_100997675 | 117 |
| 21 | 3300013105 | Ga0157369_10240044 | Ga0157369_102400442 | 117 |
| 22 | 3300020070 | Ga0206356_10501672 | Ga0206356_105016722 | 117 |
| 23 | 3300025944 | Ga0207661_10225368 | Ga0207661_102253682 | 117 |
| 24 | 3300025945 | Ga0207679_11222684 | Ga0207679_112226842 | 117 |
| 25 | 3300026116 | Ga0207674_10305415 | Ga0207674_103054153 | 117 |
| 26 | 3300026142 | Ga0207698_10527376 | Ga0207698_105273761 | 117 |
| 27 | 3300044684 | Ga0466966_0392169 | Ga0466966_0392169_271_630 | 117 |
| 28 | iso_pu_bacteria | 2929206907 | 2929211871 | 117 |
| 29 | 3300005719 | Ga0068861_101716272 | Ga0068861_1017162722 | 118 |
| 30 | 3300009174 | Ga0105241_11709624 | Ga0105241_117096242 | 118 |
| 31 | 3300013297 | Ga0157378_10207418 | Ga0157378_102074184 | 118 |
| 32 | 3300026118 | Ga0207675_100339444 | Ga0207675_1003394444 | 118 |
| 33 | 3300044684 | Ga0466966_0019231 | Ga0466966_0019231_3897_4253 | 118 |
| 34 | 3300044693 | Ga0466961_0124843 | Ga0466961_0124843_172_528 | 118 |
| 35 | 3300044842 | Ga0466957_0362061 | Ga0466957_0362061_531_887 | 118 |
| 36 | 3300048913 | Ga0496110_0530147 | Ga0496110_0530147_390_746 | 118 |
| 37 | 3300048914 | Ga0496111_1206732 | Ga0496111_1206732_83_439 | 118 |
| 38 | iso_pu_bacteria | 2571042588 | 2573041377 | 118 |
| 39 | iso_pu_bacteria | 2576861424 | 2578338872 | 118 |
| 40 | iso_pu_bacteria | 2579778775 | 2580930496 | 118 |
| 41 | iso_pu_bacteria | 2600255286 | 2601641769 | 118 |
| 42 | iso_pu_bacteria | 2619619294 | 2621273285 | 118 |
| 43 | iso_pu_bacteria | 2881636855 | 2881639965 | 118 |
| 44 | iso_pu_bacteria | 2971511577 | 2971513801 | 118 |
| 45 | iso_pu_bacteria | 2980176882 | 2980179454 | 118 |
| 46 | iso_pu_bacteria | 8057733483 | 8057735127 | 118 |
| 47 | 3300006914 | Ga0075436_101145199 | Ga0075436_1011451991 | 119 |
| 48 | 3300007076 | Ga0075435_100270141 | Ga0075435_1002701412 | 119 |
| 49 | 3300013297 | Ga0157378_10738457 | Ga0157378_107384571 | 119 |
| 50 | 3300025942 | Ga0207689_10178178 | Ga0207689_101781783 | 119 |
| 51 | 3300045051 | Ga0451576_0889698 | Ga0451576_0889698_92_454 | 119 |
| 52 | 3300048919 | Ga0496116_0078854 | Ga0496116_0078854_361_723 | 119 |
| 53 | 3300048925 | Ga0496122_0037909 | Ga0496122_0037909_778_1140 | 119 |
| 54 | 3300050513 | nmdc:mga0rr50_247805_c1 | nmdc:mga0rr50_247805_c1_859_1218 | 119 |
| 55 | 3300060353 | Ga0501082_1274526 | Ga0501082_1274526_174_536 | 119 |
| 56 | 3300009093 | Ga0105240_10905558 | Ga0105240_109055582 | 120 |
| 57 | 3300031507 | Ga0307509_10214463 | Ga0307509_102144635 | 120 |
| 58 | 3300031507 | Ga0307509_10904931 | Ga0307509_109049312 | 120 |
| 59 | 3300042876 | Ga0451577_1072897 | Ga0451577_1072897_93_458 | 120 |
| 60 | 3300045051 | Ga0451576_0535801 | Ga0451576_0535801_311_676 | 120 |
| 61 | 3300048907 | Ga0496104_0045605 | Ga0496104_0045605_1400_1765 | 120 |
| 62 | 3300048908 | Ga0496105_0311061 | Ga0496105_0311061_336_701 | 120 |
| 63 | 3300048915 | Ga0496112_0010121 | Ga0496112_0010121_5857_6222 | 120 |
| 64 | 3300048916 | Ga0496113_0189401 | Ga0496113_0189401_648_1013 | 120 |
| 65 | 3300003761 | Ga0055535_1000913 | Ga0055535_100091317 | 121 |
| 66 | 3300005289 | Ga0065704_10085506 | Ga0065704_100855067 | 121 |
| 67 | 3300005289 | Ga0065704_10086296 | Ga0065704_100862962 | 121 |
| 68 | 3300005295 | Ga0065707_10006204 | Ga0065707_1000620410 | 121 |
| 69 | 3300005435 | Ga0070714_101857082 | Ga0070714_1018570821 | 121 |
| 70 | 3300005438 | Ga0070701_10317024 | Ga0070701_103170242 | 121 |
| 71 | 3300005441 | Ga0070700_100190235 | Ga0070700_1001902352 | 121 |
| 72 | 3300005536 | Ga0070697_100192911 | Ga0070697_1001929113 | 121 |
| 73 | 3300005549 | Ga0070704_101093732 | Ga0070704_1010937321 | 121 |
| 74 | 3300005616 | Ga0068852_101921869 | Ga0068852_1019218692 | 121 |
| 75 | 3300006163 | Ga0070715_10147275 | Ga0070715_101472752 | 121 |
| 76 | 3300006871 | Ga0075434_102417271 | Ga0075434_1024172711 | 121 |
| 77 | 3300009101 | Ga0105247_10416156 | Ga0105247_104161562 | 121 |
| 78 | 3300009174 | Ga0105241_12064980 | Ga0105241_120649801 | 121 |
| 79 | 3300009553 | Ga0105249_11732441 | Ga0105249_117324412 | 121 |
| 80 | 3300025922 | Ga0207646_11105499 | Ga0207646_111054991 | 121 |
| 81 | 3300026075 | Ga0207708_10019821 | Ga0207708_100198213 | 121 |
| 82 | 3300027907 | Ga0207428_10497330 | Ga0207428_104973302 | 121 |
| 83 | 3300031691 | Ga0316579_10442667 | Ga0316579_104426672 | 121 |
| 84 | 3300031691 | Ga0316579_10601496 | Ga0316579_106014961 | 121 |
| 85 | 3300031711 | Ga0265314_10005272 | Ga0265314_1000527213 | 121 |
| 86 | 3300031728 | Ga0316578_10329203 | Ga0316578_103292032 | 121 |
| 87 | 3300031733 | Ga0316577_10005422 | Ga0316577_1000542212 | 121 |
| 88 | 3300031824 | Ga0307413_10513404 | Ga0307413_105134042 | 121 |
| 89 | 3300032002 | Ga0307416_100611551 | Ga0307416_1006115512 | 121 |
| 90 | 3300032137 | Ga0316585_10016871 | Ga0316585_100168712 | 121 |
| 91 | 3300032168 | Ga0316593_10010257 | Ga0316593_100102573 | 121 |
| 92 | 3300032168 | Ga0316593_10039245 | Ga0316593_100392454 | 121 |
| 93 | 3300032168 | Ga0316593_10250418 | Ga0316593_102504182 | 121 |
| 94 | 3300033541 | Ga0316596_1147927 | Ga0316596_11479272 | 121 |
| 95 | 3300036647 | Ga0316582_0090031 | Ga0316582_0090031_1073_1441 | 121 |
| 96 | 3300036647 | Ga0316582_0510023 | Ga0316582_0510023_50_418 | 121 |
| 97 | 3300036647 | Ga0316582_0574698 | Ga0316582_0574698_38_406 | 121 |
| 98 | 3300036712 | Ga0316584_0001013 | Ga0316584_0001013_8209_8577 | 121 |
| 99 | 3300036712 | Ga0316584_0937757 | Ga0316584_0937757_82_450 | 121 |
| 100 | 3300037588 | Ga0316581_0129941 | Ga0316581_0129941_120_488 | 121 |
| 101 | 3300042876 | Ga0451577_0000328 | Ga0451577_0000328_1047_1415 | 121 |
| 102 | 3300042876 | Ga0451577_0007263 | Ga0451577_0007263_7511_7879 | 121 |
| 103 | 3300044656 | Ga0466969_0001060 | Ga0466969_0001060_6529_6897 | 121 |
| 104 | 3300044673 | Ga0453683_0575009 | Ga0453683_0575009_187_555 | 121 |
| 105 | 3300044712 | Ga0453684_0008501 | Ga0453684_0008501_1797_2165 | 121 |
| 106 | 3300044712 | Ga0453684_0074249 | Ga0453684_0074249_2897_3265 | 121 |
| 107 | 3300044712 | Ga0453684_1308550 | Ga0453684_1308550_262_630 | 121 |
| 108 | 3300045051 | Ga0451576_0326156 | Ga0451576_0326156_443_811 | 121 |
| 109 | 3300045051 | Ga0451576_1682376 | Ga0451576_1682376_77_451 | 121 |
| 110 | 3300045051 | Ga0451576_2287734 | Ga0451576_2287734_114_479 | 121 |
| 111 | 3300045976 | Ga0466967_0442850 | Ga0466967_0442850_228_608 | 121 |
| 112 | 3300046539 | Ga0495621_0009062 | Ga0495621_0009062_1933_2307 | 121 |
| 113 | 3300046684 | Ga0495669_0130833 | Ga0495669_0130833_668_1042 | 121 |
| 114 | 3300047318 | Ga0495636_0241268 | Ga0495636_0241268_235_600 | 121 |
| 115 | 3300048911 | Ga0496108_0813419 | Ga0496108_0813419_111_476 | 121 |
| 116 | 3300048917 | Ga0496114_0491437 | Ga0496114_0491437_147_521 | 121 |
| 117 | 3300049571 | Ga0501034_0157083 | Ga0501034_0157083_464_838 | 121 |
| 118 | 3300049571 | Ga0501034_0270394 | Ga0501034_0270394_1227_1601 | 121 |
| 119 | 3300049571 | Ga0501034_0561988 | Ga0501034_0561988_124_498 | 121 |
| 120 | 3300049571 | Ga0501034_0746058 | Ga0501034_0746058_96_470 | 121 |
| 121 | 3300049585 | Ga0501069_0170104 | Ga0501069_0170104_816_1190 | 121 |
| 122 | 3300049590 | Ga0501074_1105042 | Ga0501074_1105042_179_547 | 121 |
| 123 | 3300049591 | Ga0501075_0380725 | Ga0501075_0380725_276_650 | 121 |
| 124 | 3300049823 | Ga0501044_1090447 | Ga0501044_1090447_262_636 | 121 |
| 125 | 3300050511 | nmdc:mga08y16_36401_c1 | nmdc:mga08y16_36401_c1_1699_2064 | 121 |
| 126 | 3300054114 | Ga0501084_0644831 | Ga0501084_0644831_265_633 | 121 |
| 127 | 3300021388 | Ga0213875_10003133 | Ga0213875_100031337 | 122 |
| 128 | 3300037853 | Ga0436364_0779753 | Ga0436364_0779753_5413_5781 | 122 |
| 129 | 3300037853 | Ga0436364_1327080 | Ga0436364_1327080_540_908 | 122 |
| 130 | 3300039450 | Ga0436363_0187355 | Ga0436363_0187355_112_486 | 123 |
| 131 | 3300002067 | JGI24735J21928_10012565 | JGI24735J21928_100125653 | 124 |
| 132 | 3300005327 | Ga0070658_10012380 | Ga0070658_100123804 | 124 |
| 133 | 3300005339 | Ga0070660_100112276 | Ga0070660_1001122764 | 124 |
| 134 | 3300005539 | Ga0068853_100083191 | Ga0068853_1000831913 | 124 |
| 135 | 3300005563 | Ga0068855_100305522 | Ga0068855_1003055223 | 124 |
| 136 | 3300005834 | Ga0068851_10016351 | Ga0068851_100163512 | 124 |
| 137 | 3300005842 | Ga0068858_100406819 | Ga0068858_1004068192 | 124 |
| 138 | 3300006358 | Ga0068871_100439861 | Ga0068871_1004398613 | 124 |
| 139 | 3300009093 | Ga0105240_11764108 | Ga0105240_117641081 | 124 |
| 140 | 3300009545 | Ga0105237_10000018 | Ga0105237_1000001819 | 124 |
| 141 | 3300009551 | Ga0105238_10018549 | Ga0105238_100185492 | 124 |
| 142 | 3300013296 | Ga0157374_10854240 | Ga0157374_108542401 | 124 |
| 143 | 3300025321 | Ga0207656_10041707 | Ga0207656_100417072 | 124 |
| 144 | 3300025909 | Ga0207705_10011835 | Ga0207705_100118354 | 124 |
| 145 | 3300025913 | Ga0207695_11698479 | Ga0207695_116984792 | 124 |
| 146 | 3300025914 | Ga0207671_10000714 | Ga0207671_1000071439 | 124 |
| 147 | 3300025919 | Ga0207657_10058322 | Ga0207657_100583225 | 124 |
| 148 | 3300025949 | Ga0207667_10379187 | Ga0207667_103791872 | 124 |
| 149 | 3300026035 | Ga0207703_10477945 | Ga0207703_104779452 | 124 |
| 150 | 3300026041 | Ga0207639_10132032 | Ga0207639_101320323 | 124 |
| 151 | 3300028800 | Ga0265338_10056619 | Ga0265338_100566193 | 124 |
| 152 | 3300028800 | Ga0265338_10391739 | Ga0265338_103917392 | 124 |
| 153 | 3300031090 | Ga0265760_10009887 | Ga0265760_100098873 | 124 |
| 154 | 3300031235 | Ga0265330_10052481 | Ga0265330_100524814 | 124 |
| 155 | 3300031235 | Ga0265330_10205742 | Ga0265330_102057422 | 124 |
| 156 | 3300031247 | Ga0265340_10005004 | Ga0265340_100050045 | 124 |
| 157 | 3300031247 | Ga0265340_10007709 | Ga0265340_100077093 | 124 |
| 158 | 3300031249 | Ga0265339_10132699 | Ga0265339_101326992 | 124 |
| 159 | 3300031249 | Ga0265339_10298667 | Ga0265339_102986671 | 124 |
| 160 | 3300031250 | Ga0265331_10070317 | Ga0265331_100703173 | 124 |
| 161 | 3300031344 | Ga0265316_10005065 | Ga0265316_1000506519 | 124 |
| 162 | 3300031344 | Ga0265316_10069538 | Ga0265316_100695383 | 124 |
| 163 | 3300031595 | Ga0265313_10002540 | Ga0265313_1000254015 | 124 |
| 164 | 3300031595 | Ga0265313_10043960 | Ga0265313_100439603 | 124 |
| 165 | 3300031711 | Ga0265314_10015736 | Ga0265314_100157369 | 124 |
| 166 | 3300031712 | Ga0265342_10233200 | Ga0265342_102332002 | 124 |
| 167 | 3300035692 | Ga0373935_1351482 | Ga0373935_1351482_50_427 | 124 |
| 168 | 3300036401 | Ga0373937_0556308 | Ga0373937_0556308_112_489 | 124 |
| 169 | 3300037312 | Ga0395899_0021136 | Ga0395899_0021136_1561_1935 | 124 |
| 170 | 3300037418 | Ga0395900_0130829 | Ga0395900_0130829_1181_1555 | 124 |
| 171 | 3300037466 | Ga0395898_0184785 | Ga0395898_0184785_261_635 | 124 |
| 172 | 3300049521 | Ga0501298_100340 | Ga0501298_100340_67_540 | 124 |
| 173 | 3300059477 | Ga0587084_000126 | Ga0587084_000126_816_1190 | 124 |
| 174 | 3300059490 | Ga0587066_014746 | Ga0587066_014746_168_542 | 124 |
| 175 | 3300059506 | Ga0587085_001320 | Ga0587085_001320_476_850 | 124 |
| 176 | 3300059512 | Ga0587092_003221 | Ga0587092_003221_953_1327 | 124 |
| 177 | 3300059623 | Ga0587101_035926 | Ga0587101_035926_87_461 | 124 |
| 178 | 3300059624 | Ga0587109_059584 | Ga0587109_059584_341_715 | 124 |
| 179 | 3300059627 | Ga0587117_009697 | Ga0587117_009697_448_822 | 124 |
| 180 | 3300059641 | Ga0587068_092404 | Ga0587068_092404_179_553 | 124 |
| 181 | 3300060346 | Ga0587111_0093693 | Ga0587111_0093693_312_686 | 124 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8cvm-assembly1.cif.gz_n | cutibacterium acnes 50s ribosomal subunit with p-site trna and sarecycline bound in the local refined map | 0.9574 | 5 | 124 |
| 5xym-assembly1.cif.gz_O | large subunit of mycobacterium smegmatis | 0.9541 | 6 | 124 |
| 5mmm-assembly1.cif.gz_P | structure of the 70s chloroplast ribosome | 0.9475 | 5 | 124 |
| 7jil-assembly1.cif.gz_O | 70s ribosome flavobacterium johnsoniae | 0.9417 | 4 | 124 |
| 7mt3-assembly1.cif.gz_O | mtb 70s with p/e trna | 0.9403 | 1 | 124 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5xymO01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; | 0.9597 | 21 | 124 | 3.30.420.100 |
| 6ddga01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; | 0.9504 | 29 | 124 | 3.30.420.100 |
| 5zetP01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; | 0.9411 | 21 | 124 | 3.30.420.100 |
| 5xymO01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; | 0.9385 | 21 | 124 | 3.30.420.100 |
| 4dhcS01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; | 0.9243 | 27 | 124 | 3.30.420.100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-B0C1E8-F1-model_v4 | Large ribosomal subunit protein uL18 (50S ribosomal protein L18) | 0.9886 | 9 | 124 |
GO:0003735
GO:0006412 GO:0008097 GO:0022625 |
| AF-A0A1F9VDM3-F1-model_v4 | Large ribosomal subunit protein uL18 | 0.9828 | 9 | 124 |
GO:0003735
GO:0006412 GO:0008097 GO:0022625 |
| AF-A0A6J4QBC4-F1-model_v4 | Large ribosomal subunit protein uL18 | 0.9815 | 9 | 122 |
GO:0003735
GO:0006412 GO:0008097 GO:0022625 |
| AF-A0A7T8G5L2-F1-model_v4 | Large ribosomal subunit protein uL18c | 0.9811 | 5 | 124 |
GO:0003735
GO:0005840 GO:0006412 GO:0008097 GO:0009507 GO:1990904 |
| AF-A0A1G1X343-F1-model_v4 | Large ribosomal subunit protein uL18 | 0.9803 | 8 | 124 |
GO:0003735
GO:0005737 GO:0005840 GO:0006412 GO:0008097 GO:1990904 |
Predicted Structure (AlphaFold2)
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