F277059

General Info

Members Datasets Scaffolds Average Seq Length
181 136 362 365

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_100189292|Ga0068864_1001892922
Length 405
Sequence VASAHWADGPRAYGLTSGATPEWWTPRAPGAGVSDPVRRLVAMTAEQLISFARGAPSIDIVDVDGLKAAAVRAFETDPVGMTAYGTSIGYVPLRKWIAAKHGVNAEQVLITNGSLQADAFLFDYLVQPGDAVVVEKPTYDRTLLNLKNLGAEVHQVTLDSDGIDVAELRKLLESGVRPKLAHIIPNFQNPAGVTLSGPRRTELLSLAKEYGFTIFEDDPYADIRFRGDKLPSMLSQDTDDVVVHASSFTKTVCPGVRVGYLVGPKAVIADIAKRATNLYISPGMVSEAIVHQFCISGDIDKSIATVSAALGERAALLAASLREHIPGVRFTEPDGGYFLWVELPDDVNVDKLVPAAAERGVAVVKGSDFLLEGGHHALRLAFSAVTIDQIDEGVRRLADAITDIH

Samples

Sample ID Description Type Environment
1 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
8 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
11 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
25 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
46 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
66 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
71 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
72 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
73 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
74 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
84 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
85 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
86 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
87 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
88 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
89 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
90 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
91 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
92 2501939600 Micromonospora sp. L5 Isolate Unclassified
93 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
94 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
95 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
96 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
97 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
98 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
99 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
100 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
101 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
102 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
103 2855683550 Micromonospora sp. RP3T Isolate Unclassified
104 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
105 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
106 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
107 2858868258 Micromonospora sp. MH33 Isolate Unclassified
108 2858882152 Micromonospora noduli MED15 Isolate Nodule
109 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
110 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
111 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
112 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
113 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
114 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
115 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
116 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
117 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
118 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
119 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
120 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
121 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
122 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
123 2902582711 Micromonospora sp. AP08 Isolate Unclassified
124 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
125 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
126 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
127 649633069 Micromonospora sp. L5 Isolate Unclassified
128 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
129 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
130 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
131 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
132 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
133 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
134 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
135 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
136 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 74.03
Metatranscriptomes 1.1
Isolates 24.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.31
Nodule 3.31
Rhizoplane 3.31
Rhizosphere 65.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068864_100189292 3300005618 Bacteria 1886
2 JGI25406J46586_10016084 3300003203 Bacteria 3131
3 JGI25406J46586_10019332 3300003203 Bacteria 2779
4 Ga0070668_100003237 3300005347 Bacteria 12002
5 Ga0070659_100006758 3300005366 Bacteria 8295
6 Ga0070667_100096485 3300005367 Bacteria 2550
7 Ga0070684_100028207 3300005535 Bacteria 4747
8 Ga0068859_100052623 3300005617 Bacteria 4094
9 Ga0068863_100072552 3300005841 Bacteria 3257
10 Ga0068863_100160683 3300005841 Bacteria 2152
11 Ga0068858_100008260 3300005842 Bacteria 10006
12 Ga0068862_100404532 3300005844 Bacteria 1278
13 Ga0081540_1007141 3300005983 Bacteria 8012
14 Ga0081539_10000070 3300005985 Bacteria 235651
15 Ga0081539_10002343 3300005985 Bacteria 27234
16 Ga0081539_10005648 3300005985 Bacteria 12572
17 Ga0081539_10008073 3300005985 Bacteria 9316
18 Ga0081539_10031347 3300005985 Bacteria 3279
19 Ga0070712_100000291 3300006175 Bacteria 28230
20 Ga0075428_100000233 3300006844 Bacteria 54028
21 Ga0075428_100001921 3300006844 Bacteria 22302
22 Ga0075428_100065087 3300006844 Bacteria 3992
23 Ga0075430_100003059 3300006846 Bacteria 13978
24 Ga0075430_100004977 3300006846 Bacteria 11183
25 Ga0075430_100037039 3300006846 Bacteria 4135
26 Ga0075430_100058815 3300006846 Bacteria 3231
27 Ga0075430_100169594 3300006846 Bacteria 1816
28 Ga0075431_100010318 3300006847 Bacteria 9386
29 Ga0075431_100080029 3300006847 Bacteria 3373
30 Ga0075431_100288446 3300006847 Bacteria 1661
31 Ga0075429_100007574 3300006880 Bacteria 9429
32 Ga0075429_100058968 3300006880 Bacteria 3343
33 Ga0097620_100052621 3300006931 Bacteria 4094
34 Ga0114129_10002384 3300009147 Bacteria 26102
35 Ga0114129_10006232 3300009147 Bacteria 16904
36 Ga0114129_10239146 3300009147 Bacteria 2441
37 Ga0114129_10240785 3300009147 Bacteria 2432
38 Ga0105248_10014235 3300009177 Bacteria 8757
39 Ga0157369_10032676 3300013105 Bacteria 5720
40 Ga0157372_10737943 3300013307 Bacteria 1145
41 Ga0163163_10148175 3300014325 Bacteria 2391
42 Ga0163163_10193415 3300014325 Bacteria 2082
43 Ga0157379_10003412 3300014968 Bacteria 13436
44 Ga0206356_10202567 3300020070 Bacteria 2309
45 Ga0206353_10171149 3300020082 Bacteria 3224
46 Ga0207699_10090390 3300025906 Bacteria 1921
47 Ga0207693_10000185 3300025915 Bacteria 56784
48 Ga0207652_10056124 3300025921 Bacteria 3390
49 Ga0207652_10109819 3300025921 Bacteria 2445
50 Ga0207661_10001724 3300025944 Bacteria 14963
51 Ga0207661_10004281 3300025944 Bacteria 9994
52 Ga0207679_10150956 3300025945 Bacteria 1891
53 Ga0207668_10002007 3300025972 Bacteria 11879
54 Ga0207668_10017531 3300025972 Bacteria 4488
55 Ga0207703_10030797 3300026035 Bacteria 4240
56 Ga0207641_10037107 3300026088 Bacteria 4069
57 Ga0207641_10087393 3300026088 Bacteria 2720
58 Ga0207676_10286638 3300026095 Bacteria 1497
59 Ga0207674_10012567 3300026116 Bacteria 9461
60 Ga0207674_10191065 3300026116 Bacteria 1998
61 Ga0268265_10313328 3300028380 Bacteria 1418
62 Ga0268264_10014384 3300028381 Bacteria 6505
63 Ga0265319_1003407 3300028563 Bacteria 8308
64 Ga0265318_10002796 3300028577 Bacteria 9135
65 Ga0307517_10029697 3300028786 Bacteria 6440
66 Ga0307515_10016356 3300028794 Bacteria 13588
67 Ga0307515_10032311 3300028794 Bacteria 8677
68 Ga0307515_10083793 3300028794 Bacteria 4105
69 Ga0307512_10002486 3300030522 Bacteria 23165
70 Ga0307512_10006847 3300030522 Bacteria 11428
71 Ga0265320_10024925 3300031240 Bacteria 3152
72 Ga0307513_10014582 3300031456 Bacteria 9570
73 Ga0307513_10111777 3300031456 Bacteria 2723
74 Ga0307509_10005316 3300031507 Bacteria 18008
75 Ga0307408_100024526 3300031548 Bacteria 4120
76 Ga0307508_10001768 3300031616 Bacteria 24016
77 Ga0307508_10016780 3300031616 Bacteria 6663
78 Ga0307508_10184251 3300031616 Bacteria 1690
79 Ga0307516_10009517 3300031730 Bacteria 10824
80 Ga0307516_10046695 3300031730 Bacteria 4271
81 Ga0307405_10003018 3300031731 Bacteria 7624
82 Ga0307413_10252175 3300031824 Bacteria 1310
83 Ga0307410_10002275 3300031852 Bacteria 9206
84 Ga0307406_10009443 3300031901 Bacteria 5469
85 Ga0307407_10042661 3300031903 Bacteria 2545
86 Ga0307412_10052887 3300031911 Bacteria 2691
87 Ga0307409_100003096 3300031995 Bacteria 8912
88 Ga0307416_100000210 3300032002 Bacteria 30521
89 Ga0307414_10317740 3300032004 Bacteria 1324
90 Ga0307411_10006113 3300032005 Bacteria 5990
91 Ga0307415_100000005 3300032126 Bacteria 109697
92 Ga0307507_10013926 3300033179 Bacteria 9677
93 Ga0307507_10044002 3300033179 Bacteria 4421
94 Ga0395898_0017847 3300037466 Bacteria 7240
95 Ga0395898_0057018 3300037466 Bacteria 3806
96 Ga0395905_0175431 3300037471 Bacteria 2012
97 Ga0395901_0031686 3300038443 Bacteria 5451
98 Ga0439459_0007782 3300042438 Bacteria 1817
99 Ga0466966_0145645 3300044684 Bacteria 1446
100 Ga0466967_0020287 3300045976 Bacteria 5367
101 Ga0495629_0032293 3300046459 Bacteria 3707
102 Ga0495606_0002434 3300046507 Bacteria 21635
103 Ga0495668_0000256 3300046616 Bacteria 75532
104 Ga0495625_0002602 3300046660 Bacteria 19309
105 Ga0495683_0047768 3300047323 Bacteria 2147
106 Ga0495626_0000088 3300048091 Bacteria 121421
107 Ga0496108_0001853 3300048911 Bacteria 16905
108 Ga0496112_0001879 3300048915 Bacteria 16560
109 Ga0496112_0008217 3300048915 Bacteria 9332
110 Ga0496112_0042993 3300048915 Bacteria 4422
111 Ga0496113_0072915 3300048916 Bacteria 2615
112 Ga0496113_0204076 3300048916 Bacteria 1572
113 Ga0501036_0094928 3300049572 Bacteria 2521
114 Ga0501038_0032411 3300049574 Bacteria 4610
115 Ga0501046_0046315 3300049580 Bacteria 3452
116 Ga0501047_0190032 3300049581 Bacteria 1917
117 Ga0501068_0192740 3300049584 Bacteria 1291
118 nmdc:mga05p37_122524_c1 3300050507 Bacteria 3194
119 nmdc:mga05p37_18282_c1 3300050507 Bacteria 8468
120 nmdc:mga05p37_232283_c1 3300050507 Bacteria 2221
121 nmdc:mga05p37_76490_c1 3300050507 Bacteria 4121
122 nmdc:mga09592_27_c1 3300050508 Bacteria 84251
123 nmdc:mga0qj67_14141_c1 3300050509 Bacteria 6029
124 nmdc:mga0qj67_152003_c1 3300050509 Bacteria 1878
125 nmdc:mga0qj67_174416_c1 3300050509 Bacteria 1746
126 nmdc:mga0qj67_24_c1 3300050509 Bacteria 106844
127 nmdc:mga0qj67_4579_c1 3300050509 Bacteria 10029
128 nmdc:mga0qj67_7460_c1 3300050509 Bacteria 8078
129 nmdc:mga06r32_15919_c1 3300050510 Bacteria 6843
130 nmdc:mga06r32_99_c1 3300050510 Bacteria 61063
131 Ga0500646_0000018 3300053090 Bacteria 54503
132 Ga0500583_0002765 3300053092 Bacteria 5356
133 Ga0500560_038369 3300053107 Bacteria 1490
134 Ga0500569_000890 3300053109 Bacteria 5330
135 Ga0500594_0001978 3300053118 Bacteria 4431
136 Ga0500588_0009868 3300053146 Bacteria 2286
137 2501943442 2501939600 Bacteria 6907073
138 2515721087 2515154129 Bacteria 5584369
139 2516084303 2515154202 Bacteria 5471270
140 2623585636 2622736626 Bacteria 7181580
141 2676482887 2675903059 Bacteria 8644972
142 2753269640 2751185782 Bacteria 11227053
143 2772642938 2772190715 Bacteria 6959372
144 2831938868 2831935698 Bacteria 5963223
145 2832006829 2832004796 Bacteria 6538017
146 2855674217 2855670206 Bacteria 7120389
147 2855679875 2855676851 Bacteria 7063653
148 2855689906 2855683550 Bacteria 7134265
149 2856859540 2856858025 Bacteria 7255264
150 2857290869 2857288857 Bacteria 7189066
151 2858853847 2858848962 Bacteria 6963058
152 2858872285 2858868258 Bacteria 7683772
153 2858885130 2858882152 Bacteria 7230291
154 2858893177 2858888857 Bacteria 7060307
155 2858901863 2858895516 Bacteria 7378898
156 2858905044 2858902515 Bacteria 7086037
157 2866067717 2866065130 Bacteria 6518152
158 2867307986 2867302475 Bacteria 7087181
159 2867318623 2867312974 Bacteria 7058875
160 2867324063 2867319477 Bacteria 7069771
161 2867509779 2867507094 Bacteria 6506033
162 2869053319 2869048445 Bacteria 6875584
163 2869062025 2869061728 Bacteria 7112407
164 2869071192 2869068681 Bacteria 7205615
165 2880494580 2880489317 Bacteria 7096270
166 2880497729 2880495981 Bacteria 7340502
167 2887485563 2887478801 Bacteria 8972725
168 2902588401 2902582711 Bacteria 6187705
169 2929226301 2929219909 Bacteria 6984360
170 2929232999 2929226422 Bacteria 7248583
171 2996222936 2996221748 Bacteria 6799777
172 649816248 649633069 Bacteria 6962533
173 8001782973 8001781756 Bacteria 9586736
174 8003835658 8003830390 Bacteria 6541657
175 8003858891 8003856774 Bacteria 7675274
176 8003872804 8003870546 Bacteria 7396674
177 8047716586 8047710418 Bacteria 11023148
178 8054709687 8054704163 Bacteria 7247792
179 8054729519 8054727385 Bacteria 7558670
180 8054740362 8054734606 Bacteria 6947278
181 8055416208 8055412473 Bacteria 6257500
182 Ga0068864_100189292
183 JGI25406J46586_10016084
184 JGI25406J46586_10019332
185 Ga0070668_100003237
186 Ga0070659_100006758
187 Ga0070667_100096485
188 Ga0070684_100028207
189 Ga0068859_100052623
190 Ga0068863_100072552
191 Ga0068863_100160683
192 Ga0068858_100008260
193 Ga0068862_100404532
194 Ga0081540_1007141
195 Ga0081539_10000070
196 Ga0081539_10002343
197 Ga0081539_10005648
198 Ga0081539_10008073
199 Ga0081539_10031347
200 Ga0070712_100000291
201 Ga0075428_100000233
202 Ga0075428_100001921
203 Ga0075428_100065087
204 Ga0075430_100003059
205 Ga0075430_100004977
206 Ga0075430_100037039
207 Ga0075430_100058815
208 Ga0075430_100169594
209 Ga0075431_100010318
210 Ga0075431_100080029
211 Ga0075431_100288446
212 Ga0075429_100007574
213 Ga0075429_100058968
214 Ga0097620_100052621
215 Ga0114129_10002384
216 Ga0114129_10006232
217 Ga0114129_10239146
218 Ga0114129_10240785
219 Ga0105248_10014235
220 Ga0157369_10032676
221 Ga0157372_10737943
222 Ga0163163_10148175
223 Ga0163163_10193415
224 Ga0157379_10003412
225 Ga0206356_10202567
226 Ga0206353_10171149
227 Ga0207699_10090390
228 Ga0207693_10000185
229 Ga0207652_10056124
230 Ga0207652_10109819
231 Ga0207661_10001724
232 Ga0207661_10004281
233 Ga0207679_10150956
234 Ga0207668_10002007
235 Ga0207668_10017531
236 Ga0207703_10030797
237 Ga0207641_10037107
238 Ga0207641_10087393
239 Ga0207676_10286638
240 Ga0207674_10012567
241 Ga0207674_10191065
242 Ga0268265_10313328
243 Ga0268264_10014384
244 Ga0265319_1003407
245 Ga0265318_10002796
246 Ga0307517_10029697
247 Ga0307515_10016356
248 Ga0307515_10032311
249 Ga0307515_10083793
250 Ga0307512_10002486
251 Ga0307512_10006847
252 Ga0265320_10024925
253 Ga0307513_10014582
254 Ga0307513_10111777
255 Ga0307509_10005316
256 Ga0307408_100024526
257 Ga0307508_10001768
258 Ga0307508_10016780
259 Ga0307508_10184251
260 Ga0307516_10009517
261 Ga0307516_10046695
262 Ga0307405_10003018
263 Ga0307413_10252175
264 Ga0307410_10002275
265 Ga0307406_10009443
266 Ga0307407_10042661
267 Ga0307412_10052887
268 Ga0307409_100003096
269 Ga0307416_100000210
270 Ga0307414_10317740
271 Ga0307411_10006113
272 Ga0307415_100000005
273 Ga0307507_10013926
274 Ga0307507_10044002
275 Ga0395898_0017847
276 Ga0395898_0057018
277 Ga0395905_0175431
278 Ga0395901_0031686
279 Ga0439459_0007782
280 Ga0466966_0145645
281 Ga0466967_0020287
282 Ga0495629_0032293
283 Ga0495606_0002434
284 Ga0495668_0000256
285 Ga0495625_0002602
286 Ga0495683_0047768
287 Ga0495626_0000088
288 Ga0496108_0001853
289 Ga0496112_0001879
290 Ga0496112_0008217
291 Ga0496112_0042993
292 Ga0496113_0072915
293 Ga0496113_0204076
294 Ga0501036_0094928
295 Ga0501038_0032411
296 Ga0501046_0046315
297 Ga0501047_0190032
298 Ga0501068_0192740
299 nmdc:mga05p37_122524_c1
300 nmdc:mga05p37_18282_c1
301 nmdc:mga05p37_232283_c1
302 nmdc:mga05p37_76490_c1
303 nmdc:mga09592_27_c1
304 nmdc:mga0qj67_14141_c1
305 nmdc:mga0qj67_152003_c1
306 nmdc:mga0qj67_174416_c1
307 nmdc:mga0qj67_24_c1
308 nmdc:mga0qj67_4579_c1
309 nmdc:mga0qj67_7460_c1
310 nmdc:mga06r32_15919_c1
311 nmdc:mga06r32_99_c1
312 Ga0500646_0000018
313 Ga0500583_0002765
314 Ga0500560_038369
315 Ga0500569_000890
316 Ga0500594_0001978
317 Ga0500588_0009868
318 2501943442
319 2515721087
320 2516084303
321 2623585636
322 2676482887
323 2753269640
324 2772642938
325 2831938868
326 2832006829
327 2855674217
328 2855679875
329 2855689906
330 2856859540
331 2857290869
332 2858853847
333 2858872285
334 2858885130
335 2858893177
336 2858901863
337 2858905044
338 2866067717
339 2867307986
340 2867318623
341 2867324063
342 2867509779
343 2869053319
344 2869062025
345 2869071192
346 2880494580
347 2880497729
348 2887485563
349 2902588401
350 2929226301
351 2929232999
352 2996222936
353 649816248
354 8001782973
355 8003835658
356 8003858891
357 8003872804
358 8047716586
359 8054709687
360 8054729519
361 8054740362
362 8055416208

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

46

397

0.89

PF12897

Asp_aminotransf

Aspartate amino-transferase

39

403

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zp7-assembly3.cif.gz_F crystal structure of lysn, alpha-aminoadipate aminotransferase (leucine complex), from thermus thermophilus hb27 0.9491 6 367
2z1y-assembly1.cif.gz_A crystal structure of lysn, alpha-aminoadipate aminotransferase (complexed with n-(5'-phosphopyridoxyl)-l-leucine), from thermus thermophilus hb27 0.9484 6 367
4ge4-assembly1.cif.gz_A kynurenine aminotransferase ii inhibitors 0.9301 38 366
3av7-assembly1.cif.gz_A crystal structure of pyrococcus horikoshii kynurenine aminotransferase in complex with pmp, kyn as substrates and kya as products 0.9289 6 366
3ue8-assembly3.cif.gz_A kynurenine aminotransferase ii inhibitors 0.9277 38 366
ID Description Score Start End Superfamily
2dtvA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9611 41 255 3.40.640.10
2dtvA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9354 41 255 3.40.640.10
af_Q54K00_2_440_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9272 34 366 3.40.640.10
2douB01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9222 263 363 3.90.1150.10
af_P10356_314_438_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9136 255 367 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A367A4L3-F1-model_v4 PLP-dependent aminotransferase family protein 0.9754 7 369 GO:0008483
GO:0009058
GO:0030170
GO:1901605
AF-A0A367A4L3-F1-model_v4 PLP-dependent aminotransferase family protein 0.9728 7 369 GO:0008483
GO:0009058
GO:0030170
GO:1901605
AF-A0A538A2G3-F1-model_v4 PLP-dependent aminotransferase family protein 0.9677 154 368 GO:0008483
GO:0009058
GO:0030170
GO:1901605
AF-A0A838PPX6-F1-model_v4 PLP-dependent aminotransferase family protein 0.9661 3 187 GO:0008483
GO:0009058
GO:0030170
GO:1901605
AF-A0A838PPX6-F1-model_v4 PLP-dependent aminotransferase family protein 0.956 3 187 GO:0008483
GO:0009058
GO:0030170
GO:1901605

Map