F276214

General Info

Members Datasets Scaffolds Average Seq Length
180 116 171 371

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0000112|Ga0495686_0000112_32842_33963
Length 373
Sequence MAGIYIHIPFCKQACYYCDFHFSTSLKYKDDLLQALAKEIKLQKTYLNNETIETIYFGGGTPSLLEADEINRLINTITDLHTVSSTAEITLEANPDDLDDAKIKALRQTNVNRFSIGIQSFFDEDLLWMNRAHRSRHAEASVKRAQDAGFENITADLIYGYPLLTDSKWKQNLDKIFELGIPHVSSYSMTVEPQTALAAFINKKTQPPMNEQQSAAQFVVLMDAMADHGFEHYEISNFCQPGHYSKHNSNYWQGVKYLGIGPSAHSYNGEARQWNIANNAKYIQGIEMGKLPAETETLTEENRLNEYIMTSIRTMWGLDLDKLNNIAKASANELLIAARRYFDNGWITQKDNTLYLTPAGKLYADNIAAGLFF

Samples

Sample ID Description Type Environment
1 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
2 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
3 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
4 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
5 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
6 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
7 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
8 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
76 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
77 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
78 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
79 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
80 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
97 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
98 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
99 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
100 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
108 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
109 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
110 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
111 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
112 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
113 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
114 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
115 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
116 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95
Metatranscriptomes 0
Isolates 5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.78
Nodule 0
Rhizoplane 0
Rhizosphere 85
Stem 0
Stem Tuber 0
Unclassified 7.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10011123 3300001979 Bacteria 3437
2 JGI25162J39368_1002614 3300002737 Bacteria 6733
3 JGI25165J46597_1000657 3300003214 Bacteria 28325
4 rootH1_10004106 3300003323 Bacteria 40486
5 rootH1_10151589 3300003323 Bacteria 3635
6 Ga0070658_10000060 3300005327 Bacteria 112561
7 Ga0070658_10012269 3300005327 Bacteria 6880
8 Ga0070683_100154361 3300005329 Bacteria 2177
9 Ga0070680_100003125 3300005336 Bacteria 12298
10 Ga0068868_100057338 3300005338 Bacteria 3077
11 Ga0070662_100000087 3300005457 Bacteria 50586
12 Ga0070681_10006111 3300005458 Bacteria 11685
13 Ga0070679_100140546 3300005530 Bacteria 2394
14 Ga0070684_100042794 3300005535 Bacteria 3911
15 Ga0068853_100113615 3300005539 Bacteria 2408
16 Ga0070665_100000346 3300005548 Bacteria 69887
17 Ga0068855_100000393 3300005563 Bacteria 53897
18 Ga0068855_100000467 3300005563 Bacteria 49741
19 Ga0068855_100025552 3300005563 Bacteria 7064
20 Ga0068857_100115876 3300005577 Bacteria 2410
21 Ga0068856_100001286 3300005614 Bacteria 26396
22 Ga0068856_100001769 3300005614 Bacteria 22575
23 Ga0068852_100102660 3300005616 Bacteria 2584
24 Ga0068858_100085701 3300005842 Bacteria 2931
25 Ga0097621_100000098 3300006237 Bacteria 48530
26 Ga0068871_100000062 3300006358 Bacteria 58641
27 Ga0068865_100029776 3300006881 Bacteria 3626
28 Ga0105240_10004395 3300009093 Bacteria 21507
29 Ga0105240_10005101 3300009093 Bacteria 19667
30 Ga0105240_10009035 3300009093 Bacteria 14152
31 Ga0105240_10011658 3300009093 Bacteria 12219
32 Ga0105240_10023582 3300009093 Bacteria 8130
33 Ga0105240_10091739 3300009093 Bacteria 3710
34 Ga0105240_10130514 3300009093 Bacteria 3015
35 Ga0105240_10461743 3300009093 Bacteria 1419
36 Ga0105241_10000755 3300009174 Bacteria 24591
37 Ga0105241_10015150 3300009174 Bacteria 5647
38 Ga0105241_10015765 3300009174 Bacteria 5538
39 Ga0105242_10056122 3300009176 Bacteria 3223
40 Ga0105237_10000535 3300009545 Bacteria 53620
41 Ga0105237_10000794 3300009545 Bacteria 43200
42 Ga0105237_10035685 3300009545 Bacteria 5030
43 Ga0105238_10076573 3300009551 Bacteria 3336
44 Ga0105238_10246455 3300009551 Bacteria 1764
45 Ga0105239_10000011 3300010375 Bacteria 337500
46 Ga0105239_10000086 3300010375 Bacteria 129798
47 Ga0105239_10000478 3300010375 Bacteria 58328
48 Ga0105239_10009868 3300010375 Bacteria 10727
49 Ga0105239_10044389 3300010375 Bacteria 4873
50 Ga0105239_10100365 3300010375 Bacteria 3201
51 Ga0105239_10388801 3300010375 Bacteria 1578
52 Ga0105246_10068728 3300011119 Bacteria 2485
53 Ga0157373_10000203 3300013100 Bacteria 49252
54 Ga0157373_10032227 3300013100 Bacteria 3773
55 Ga0157371_10000342 3300013102 Bacteria 59948
56 Ga0157371_10004038 3300013102 Bacteria 12982
57 Ga0157371_10116965 3300013102 Bacteria 1895
58 Ga0157370_10078777 3300013104 Bacteria 3103
59 Ga0157370_10127922 3300013104 Bacteria 2371
60 Ga0157369_10003206 3300013105 Bacteria 19507
61 Ga0157369_10040033 3300013105 Bacteria 5119
62 Ga0157369_10051290 3300013105 Bacteria 4465
63 Ga0157369_10083724 3300013105 Bacteria 3410
64 Ga0157374_10009793 3300013296 Bacteria 8230
65 Ga0157378_10011074 3300013297 Bacteria 7894
66 Ga0163162_10000008 3300013306 Bacteria 316194
67 Ga0163162_10002811 3300013306 Bacteria 16559
68 Ga0163162_10012096 3300013306 Bacteria 8420
69 Ga0163162_10305616 3300013306 Bacteria 1723
70 Ga0157372_10000190 3300013307 Bacteria 67909
71 Ga0157372_10000404 3300013307 Bacteria 47383
72 Ga0157372_10000789 3300013307 Bacteria 34389
73 Ga0157372_10065218 3300013307 Bacteria 4088
74 Ga0157372_10247450 3300013307 Bacteria 2069
75 Ga0157375_10084661 3300013308 Bacteria 3220
76 Ga0157375_10085632 3300013308 Bacteria 3201
77 Ga0157377_10074483 3300014745 Bacteria 1970
78 Ga0209563_102980 3300025230 Bacteria 3639
79 Ga0207427_100131 3300025231 Bacteria 93947
80 Ga0209437_100048 3300025233 Bacteria 405107
81 Ga0209437_100361 3300025233 Bacteria 50797
82 Ga0209026_1000562 3300025250 Bacteria 25249
83 Ga0209026_1001934 3300025250 Bacteria 8363
84 Ga0209026_1004521 3300025250 Bacteria 4095
85 Ga0209233_1000029 3300025261 Bacteria 641642
86 Ga0209233_1005452 3300025261 Bacteria 4218
87 Ga0207647_10000416 3300025904 Bacteria 35091
88 Ga0207647_10003802 3300025904 Bacteria 11280
89 Ga0207645_10001067 3300025907 Bacteria 22672
90 Ga0207705_10000194 3300025909 Bacteria 61623
91 Ga0207654_10009728 3300025911 Bacteria 4891
92 Ga0207654_10018226 3300025911 Bacteria 3680
93 Ga0207695_10000019 3300025913 Bacteria 732137
94 Ga0207695_10002467 3300025913 Bacteria 27287
95 Ga0207695_10027870 3300025913 Bacteria 6279
96 Ga0207695_10045052 3300025913 Bacteria 4686
97 Ga0207695_10095978 3300025913 Bacteria 2967
98 Ga0207671_10000888 3300025914 Bacteria 37881
99 Ga0207671_10000933 3300025914 Bacteria 36512
100 Ga0207671_10004918 3300025914 Bacteria 12545
101 Ga0207660_10006150 3300025917 Bacteria 7791
102 Ga0207694_10047813 3300025924 Bacteria 3309
103 Ga0207690_10000253 3300025932 Bacteria 38909
104 Ga0207706_10000013 3300025933 Bacteria 188236
105 Ga0207686_10023206 3300025934 Bacteria 3581
106 Ga0207704_10000015 3300025938 Bacteria 163572
107 Ga0207667_10000117 3300025949 Bacteria 127391
108 Ga0207667_10006048 3300025949 Bacteria 14714
109 Ga0207667_10009814 3300025949 Bacteria 11248
110 Ga0207667_10024445 3300025949 Bacteria 6633
111 Ga0207667_10227235 3300025949 Bacteria 1912
112 Ga0207677_10024119 3300026023 Bacteria 3773
113 Ga0207639_10001662 3300026041 Bacteria 14995
114 Ga0207639_10093404 3300026041 Bacteria 2413
115 Ga0207702_10001576 3300026078 Bacteria 22582
116 Ga0207648_10227475 3300026089 Bacteria 1659
117 Ga0207674_10095525 3300026116 Bacteria 2958
118 Ga0207683_10015759 3300026121 Bacteria 6433
119 Ga0268266_10000098 3300028379 Bacteria 182784
120 Ga0307517_10000207 3300028786 Bacteria 99774
121 Ga0307515_10115020 3300028794 Bacteria 3104
122 Ga0316177_1132473 3300030731 Bacteria 11360
123 Ga0316176_1093032 3300030732 Bacteria 3092
124 Ga0316183_1058180 3300030742 Bacteria 21433
125 Ga0316181_1078206 3300030744 Bacteria 20494
126 Ga0316182_1032930 3300030745 Bacteria 2221
127 Ga0307509_10017191 3300031507 Bacteria 8333
128 Ga0307408_100000671 3300031548 Bacteria 28437
129 Ga0307413_10108066 3300031824 Bacteria 1856
130 Ga0307412_10124424 3300031911 Bacteria 1862
131 Ga0307414_10036865 3300032004 Bacteria 3269
132 Ga0307507_10002401 3300033179 Bacteria 39546
133 Ga0307510_10007352 3300033180 Bacteria 13126
134 Ga0395899_0001862 3300037312 Bacteria 17435
135 Ga0395899_0007107 3300037312 Bacteria 8667
136 Ga0395900_0026577 3300037418 Bacteria 5926
137 Ga0395898_0202280 3300037466 Bacteria 1896
138 Ga0395905_0000973 3300037471 Bacteria 36728
139 Ga0395901_0006982 3300038443 Bacteria 11412
140 Ga0466966_0029578 3300044684 Bacteria 3562
141 Ga0495585_0000036 3300046492 Bacteria 135914
142 Ga0495583_0063557 3300046506 Bacteria 1640
143 Ga0495606_0000034 3300046507 Bacteria 247705
144 Ga0495606_0004085 3300046507 Bacteria 14840
145 Ga0495610_0007747 3300046512 Bacteria 7088
146 Ga0495616_0002083 3300046513 Bacteria 13437
147 Ga0495616_0004203 3300046513 Bacteria 9125
148 Ga0495631_0010741 3300046518 Bacteria 4526
149 Ga0495633_0008348 3300046558 Bacteria 5847
150 Ga0495625_0000049 3300046660 Bacteria 197646
151 Ga0495625_0009774 3300046660 Bacteria 7981
152 Ga0495625_0076796 3300046660 Bacteria 2335
153 Ga0495625_0127929 3300046660 Bacteria 1723
154 Ga0495661_0001353 3300046665 Bacteria 20746
155 Ga0495661_0020015 3300046665 Bacteria 4376
156 Ga0495661_0020980 3300046665 Bacteria 4262
157 Ga0495649_0000014 3300046694 Bacteria 287408
158 Ga0495660_0003069 3300046810 Bacteria 10421
159 Ga0495636_0000011 3300047318 Bacteria 87862
160 Ga0495687_001352 3300047443 Bacteria 22774
161 Ga0495686_0000112 3300047472 Bacteria 168354
162 Ga0495686_0013162 3300047472 Bacteria 5754
163 Ga0495678_043625 3300049459 Bacteria 1779
164 Ga0501198_006487 3300049649 Bacteria 1668
165 Ga0501223_000660 3300049663 Bacteria 8299
166 nmdc:mga0k408_4933_c1 3300050493 Bacteria 7067
167 Ga0500635_0000530 3300053080 Bacteria 10416
168 Ga0500569_027925 3300053109 Bacteria 1560
169 Ga0500622_0000537 3300053156 Bacteria 35129
170 Ga0500624_001001 3300053157 Bacteria 5695
171 Ga0500634_0029019 3300053161 Bacteria 3015

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031548 Ga0307408_100000671 Ga0307408_10000067121 338
2 3300005577 Ga0068857_100115876 Ga0068857_1001158762 342
3 3300025250 Ga0209026_1000562 Ga0209026_100056218 342
4 3300025261 Ga0209233_1005452 Ga0209233_10054523 342
5 3300025904 Ga0207647_10003802 Ga0207647_100038023 342
6 3300026116 Ga0207674_10095525 Ga0207674_100955253 342
7 3300046507 Ga0495606_0000034 Ga0495606_0000034_142947_143975 342
8 3300046507 Ga0495606_0004085 Ga0495606_0004085_2948_3976 342
9 3300046512 Ga0495610_0007747 Ga0495610_0007747_2974_4002 342
10 3300046513 Ga0495616_0002083 Ga0495616_0002083_11162_12190 342
11 3300046558 Ga0495633_0008348 Ga0495633_0008348_2773_3801 342
12 3300046660 Ga0495625_0000049 Ga0495625_0000049_77721_78749 342
13 3300046665 Ga0495661_0001353 Ga0495661_0001353_1791_2819 342
14 3300046665 Ga0495661_0020015 Ga0495661_0020015_1993_3021 342
15 3300046665 Ga0495661_0020980 Ga0495661_0020980_1146_2174 342
16 3300046694 Ga0495649_0000014 Ga0495649_0000014_117207_118235 342
17 3300046810 Ga0495660_0003069 Ga0495660_0003069_8244_9272 342
18 3300046513 Ga0495616_0004203 Ga0495616_0004203_199_1320 360
19 3300049459 Ga0495678_043625 Ga0495678_043625_622_1743 360
20 iso_pu_bacteria 2896317667 2896321390 367
21 iso_pu_bacteria 2898713307 2898716081 367
22 iso_pu_bacteria 2842903701 2842907162 369
23 iso_pu_bacteria 2852623160 2852627150 369
24 iso_pu_bacteria 2884933994 2884935912 369
25 iso_pu_bacteria 2928147474 2928152122 369
26 iso_pu_bacteria 2977232053 2977233988 369
27 iso_pu_bacteria 8055588893 8055590211 369
28 3300001979 JGI24740J21852_10011123 JGI24740J21852_100111231 373
29 3300002737 JGI25162J39368_1002614 JGI25162J39368_10026145 373
30 3300003214 JGI25165J46597_1000657 JGI25165J46597_10006578 373
31 3300003323 rootH1_10004106 rootH1_100041066 373
32 3300003323 rootH1_10151589 rootH1_101515892 373
33 3300005327 Ga0070658_10000060 Ga0070658_1000006066 373
34 3300005327 Ga0070658_10012269 Ga0070658_100122696 373
35 3300005329 Ga0070683_100154361 Ga0070683_1001543612 373
36 3300005336 Ga0070680_100003125 Ga0070680_1000031254 373
37 3300005338 Ga0068868_100057338 Ga0068868_1000573382 373
38 3300005457 Ga0070662_100000087 Ga0070662_10000008715 373
39 3300005458 Ga0070681_10006111 Ga0070681_100061119 373
40 3300005530 Ga0070679_100140546 Ga0070679_1001405462 373
41 3300005535 Ga0070684_100042794 Ga0070684_1000427943 373
42 3300005539 Ga0068853_100113615 Ga0068853_1001136152 373
43 3300005548 Ga0070665_100000346 Ga0070665_10000034634 373
44 3300005563 Ga0068855_100000393 Ga0068855_1000003939 373
45 3300005563 Ga0068855_100000467 Ga0068855_10000046711 373
46 3300005563 Ga0068855_100025552 Ga0068855_1000255523 373
47 3300005614 Ga0068856_100001286 Ga0068856_10000128619 373
48 3300005614 Ga0068856_100001769 Ga0068856_10000176915 373
49 3300005616 Ga0068852_100102660 Ga0068852_1001026601 373
50 3300005842 Ga0068858_100085701 Ga0068858_1000857012 373
51 3300006237 Ga0097621_100000098 Ga0097621_10000009832 373
52 3300006358 Ga0068871_100000062 Ga0068871_1000000621 373
53 3300006881 Ga0068865_100029776 Ga0068865_1000297764 373
54 3300009093 Ga0105240_10004395 Ga0105240_1000439513 373
55 3300009093 Ga0105240_10005101 Ga0105240_100051015 373
56 3300009093 Ga0105240_10009035 Ga0105240_1000903511 373
57 3300009093 Ga0105240_10011658 Ga0105240_100116586 373
58 3300009093 Ga0105240_10023582 Ga0105240_100235825 373
59 3300009093 Ga0105240_10091739 Ga0105240_100917394 373
60 3300009093 Ga0105240_10130514 Ga0105240_101305143 373
61 3300009093 Ga0105240_10461743 Ga0105240_104617431 373
62 3300009174 Ga0105241_10000755 Ga0105241_1000075515 373
63 3300009174 Ga0105241_10015150 Ga0105241_100151504 373
64 3300009174 Ga0105241_10015765 Ga0105241_100157654 373
65 3300009176 Ga0105242_10056122 Ga0105242_100561222 373
66 3300009545 Ga0105237_10000535 Ga0105237_1000053547 373
67 3300009545 Ga0105237_10000794 Ga0105237_1000079432 373
68 3300009545 Ga0105237_10035685 Ga0105237_100356853 373
69 3300009551 Ga0105238_10076573 Ga0105238_100765733 373
70 3300009551 Ga0105238_10246455 Ga0105238_102464551 373
71 3300010375 Ga0105239_10000011 Ga0105239_1000001136 373
72 3300010375 Ga0105239_10000086 Ga0105239_1000008691 373
73 3300010375 Ga0105239_10000478 Ga0105239_1000047823 373
74 3300010375 Ga0105239_10009868 Ga0105239_100098684 373
75 3300010375 Ga0105239_10044389 Ga0105239_100443895 373
76 3300010375 Ga0105239_10100365 Ga0105239_101003654 373
77 3300010375 Ga0105239_10388801 Ga0105239_103888011 373
78 3300011119 Ga0105246_10068728 Ga0105246_100687282 373
79 3300013100 Ga0157373_10000203 Ga0157373_1000020328 373
80 3300013100 Ga0157373_10032227 Ga0157373_100322273 373
81 3300013102 Ga0157371_10000342 Ga0157371_1000034214 373
82 3300013102 Ga0157371_10004038 Ga0157371_100040387 373
83 3300013102 Ga0157371_10116965 Ga0157371_101169652 373
84 3300013104 Ga0157370_10078777 Ga0157370_100787772 373
85 3300013104 Ga0157370_10127922 Ga0157370_101279221 373
86 3300013105 Ga0157369_10003206 Ga0157369_1000320614 373
87 3300013105 Ga0157369_10040033 Ga0157369_100400333 373
88 3300013105 Ga0157369_10051290 Ga0157369_100512904 373
89 3300013105 Ga0157369_10083724 Ga0157369_100837243 373
90 3300013296 Ga0157374_10009793 Ga0157374_100097934 373
91 3300013297 Ga0157378_10011074 Ga0157378_100110744 373
92 3300013306 Ga0163162_10000008 Ga0163162_10000008141 373
93 3300013306 Ga0163162_10002811 Ga0163162_100028117 373
94 3300013306 Ga0163162_10012096 Ga0163162_100120963 373
95 3300013306 Ga0163162_10305616 Ga0163162_103056162 373
96 3300013307 Ga0157372_10000190 Ga0157372_1000019020 373
97 3300013307 Ga0157372_10000404 Ga0157372_100004047 373
98 3300013307 Ga0157372_10000789 Ga0157372_100007899 373
99 3300013307 Ga0157372_10065218 Ga0157372_100652185 373
100 3300013307 Ga0157372_10247450 Ga0157372_102474502 373
101 3300013308 Ga0157375_10084661 Ga0157375_100846613 373
102 3300013308 Ga0157375_10085632 Ga0157375_100856322 373
103 3300014745 Ga0157377_10074483 Ga0157377_100744831 373
104 3300025230 Ga0209563_102980 Ga0209563_1029804 373
105 3300025231 Ga0207427_100131 Ga0207427_10013110 373
106 3300025233 Ga0209437_100048 Ga0209437_100048100 373
107 3300025233 Ga0209437_100361 Ga0209437_10036112 373
108 3300025250 Ga0209026_1001934 Ga0209026_10019347 373
109 3300025250 Ga0209026_1004521 Ga0209026_10045215 373
110 3300025261 Ga0209233_1000029 Ga0209233_1000029277 373
111 3300025904 Ga0207647_10000416 Ga0207647_1000041614 373
112 3300025907 Ga0207645_10001067 Ga0207645_1000106714 373
113 3300025909 Ga0207705_10000194 Ga0207705_1000019432 373
114 3300025911 Ga0207654_10009728 Ga0207654_100097283 373
115 3300025911 Ga0207654_10018226 Ga0207654_100182263 373
116 3300025913 Ga0207695_10000019 Ga0207695_10000019598 373
117 3300025913 Ga0207695_10002467 Ga0207695_1000246722 373
118 3300025913 Ga0207695_10027870 Ga0207695_100278702 373
119 3300025913 Ga0207695_10045052 Ga0207695_100450522 373
120 3300025913 Ga0207695_10095978 Ga0207695_100959783 373
121 3300025914 Ga0207671_10000888 Ga0207671_1000088822 373
122 3300025914 Ga0207671_10000933 Ga0207671_1000093317 373
123 3300025914 Ga0207671_10004918 Ga0207671_100049188 373
124 3300025917 Ga0207660_10006150 Ga0207660_100061505 373
125 3300025924 Ga0207694_10047813 Ga0207694_100478133 373
126 3300025932 Ga0207690_10000253 Ga0207690_1000025331 373
127 3300025933 Ga0207706_10000013 Ga0207706_1000001324 373
128 3300025934 Ga0207686_10023206 Ga0207686_100232062 373
129 3300025938 Ga0207704_10000015 Ga0207704_10000015100 373
130 3300025949 Ga0207667_10000117 Ga0207667_1000011785 373
131 3300025949 Ga0207667_10006048 Ga0207667_1000604813 373
132 3300025949 Ga0207667_10009814 Ga0207667_100098141 373
133 3300025949 Ga0207667_10024445 Ga0207667_100244453 373
134 3300025949 Ga0207667_10227235 Ga0207667_102272352 373
135 3300026023 Ga0207677_10024119 Ga0207677_100241194 373
136 3300026041 Ga0207639_10001662 Ga0207639_1000166213 373
137 3300026041 Ga0207639_10093404 Ga0207639_100934042 373
138 3300026078 Ga0207702_10001576 Ga0207702_100015769 373
139 3300026089 Ga0207648_10227475 Ga0207648_102274752 373
140 3300026121 Ga0207683_10015759 Ga0207683_100157592 373
141 3300028379 Ga0268266_10000098 Ga0268266_1000009814 373
142 3300028786 Ga0307517_10000207 Ga0307517_1000020770 373
143 3300028794 Ga0307515_10115020 Ga0307515_101150202 373
144 3300030731 Ga0316177_1132473 Ga0316177_11324739 373
145 3300030732 Ga0316176_1093032 Ga0316176_10930323 373
146 3300030742 Ga0316183_1058180 Ga0316183_105818015 373
147 3300030744 Ga0316181_1078206 Ga0316181_107820615 373
148 3300030745 Ga0316182_1032930 Ga0316182_10329302 373
149 3300031507 Ga0307509_10017191 Ga0307509_100171917 373
150 3300031824 Ga0307413_10108066 Ga0307413_101080662 373
151 3300031911 Ga0307412_10124424 Ga0307412_101244241 373
152 3300032004 Ga0307414_10036865 Ga0307414_100368651 373
153 3300033179 Ga0307507_10002401 Ga0307507_100024013 373
154 3300033180 Ga0307510_10007352 Ga0307510_100073527 373
155 3300037312 Ga0395899_0001862 Ga0395899_0001862_7451_8572 373
156 3300037312 Ga0395899_0007107 Ga0395899_0007107_4738_5859 373
157 3300037418 Ga0395900_0026577 Ga0395900_0026577_3959_5080 373
158 3300037466 Ga0395898_0202280 Ga0395898_0202280_530_1651 373
159 3300037471 Ga0395905_0000973 Ga0395905_0000973_7158_8279 373
160 3300038443 Ga0395901_0006982 Ga0395901_0006982_8413_9534 373
161 3300044684 Ga0466966_0029578 Ga0466966_0029578_2388_3509 373
162 3300046492 Ga0495585_0000036 Ga0495585_0000036_35450_36571 373
163 3300046506 Ga0495583_0063557 Ga0495583_0063557_29_1150 373
164 3300046518 Ga0495631_0010741 Ga0495631_0010741_1862_2983 373
165 3300046660 Ga0495625_0009774 Ga0495625_0009774_5980_7101 373
166 3300046660 Ga0495625_0076796 Ga0495625_0076796_148_1269 373
167 3300046660 Ga0495625_0127929 Ga0495625_0127929_545_1666 373
168 3300047318 Ga0495636_0000011 Ga0495636_0000011_32718_33890 373
169 3300047443 Ga0495687_001352 Ga0495687_001352_16704_17825 373
170 3300047472 Ga0495686_0000112 Ga0495686_0000112_32842_33963 373
171 3300047472 Ga0495686_0013162 Ga0495686_0013162_90_1211 373
172 3300049649 Ga0501198_006487 Ga0501198_006487_61_1200 373
173 3300049663 Ga0501223_000660 Ga0501223_000660_3813_4943 373
174 3300050493 nmdc:mga0k408_4933_c1 nmdc:mga0k408_4933_c1_2409_3530 373
175 3300053080 Ga0500635_0000530 Ga0500635_0000530_3041_4162 373
176 3300053109 Ga0500569_027925 Ga0500569_027925_163_1284 373
177 3300053156 Ga0500622_0000537 Ga0500622_0000537_32027_33148 373
178 3300053157 Ga0500624_001001 Ga0500624_001001_1121_2242 373
179 3300053161 Ga0500634_0029019 Ga0500634_0029019_332_1453 373
180 iso_pu_bacteria 2932082852 2932087014 373

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06969

HemN_C

HemN C-terminal domain

298

363

0.97

PF04055

Radical_SAM

Radical SAM superfamily

5

176

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8546 2 372
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.8483 2 372
5v1s-assembly1.cif.gz_A crystal structure of streptococcus suis suib bound to s-adenosylmethionine 0.7369 3 228
8asw-assembly1.cif.gz_C cryo-em structure of yeast elp123 in complex with alanine trna 0.7358 1 221
6qk7-assembly1.cif.gz_C elongator catalytic subcomplex elp123 lobe 0.7297 1 222
ID Description Score Start End Superfamily
af_Q5SUV1_33_283_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9228 3 244 3.20.20.70
af_A4IGH2_157_284_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9139 114 240 3.30.750.200
af_Q9HA92_43_208_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9097 5 169 3.20.20.70
af_P9WP73_8_223_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9008 4 213 3.80.30.20
af_A4IGH2_157_284_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9005 114 240 3.30.750.200
ID Description Score Start End GO Terms
AF-A0A4Q3AVQ6-F1-model_v4 Coproporphyrinogen III oxidase 0.9853 150 373 GO:0005737
GO:0006779
GO:0051539
AF-A0A4R7D2K7-F1-model_v4 Heme chaperone HemW 0.9838 39 373 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A443YPK8-F1-model_v4 Heme chaperone HemW 0.9808 1 373 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A4Q5SGC0-F1-model_v4 Heme chaperone HemW 0.98 1 307 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539
AF-A0A443YPK8-F1-model_v4 Heme chaperone HemW 0.9782 1 373 GO:0004109
GO:0005737
GO:0006779
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
91.09 0.89 High
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Predicted Structure (AlphaFold2)

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