F276186

General Info

Members Datasets Scaffolds Average Seq Length
180 143 360 161

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0017236|Ga0495625_0017236_3581_4126
Length 181
Sequence VALCRSNEVKARNPKMTTNGMILIALTGAGATAAVDLWALLRRRVFGVPLPNYALVGRWIAHMARGRVRHDSIAAAPLVRAERAIGWCTHYLTGIAFAFLLPAFWGAGWMQRPALLPALMVGITTVAAPFFVMQPAMGAGFAASRTPRPNAARLQSLITHAMFGLGLYLAGVLVCNLPIGE

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
6 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005473 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v2 (version 2) Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
88 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
96 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
99 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
100 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
101 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
102 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
103 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
121 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
131 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
132 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
134 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
135 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
136 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
137 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
138 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
139 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
140 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
141 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
142 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
143 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 0
Isolates 5.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.11
Nodule 0.56
Rhizoplane 1.11
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 8.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0017236 3300046660 Bacteria 5656
2 SwRhRL2b_contig_956066 2162886007 Bacteria 4704
3 rootH2_10126942 3300003320 Bacteria 2383
4 rootL2_10097714 3300003322 Bacteria 2416
5 Ga0058692_1000067 3300003856 Bacteria 88996
6 Ga0065703_1000507 3300005272 Bacteria 24291
7 Ga0065704_10000472 3300005289 Bacteria 19620
8 Ga0065704_10172824 3300005289 Bacteria 1281
9 Ga0070677_10331040 3300005333 Bacteria 783
10 Ga0070680_100502872 3300005336 Bacteria 1037
11 Ga0070660_100194746 3300005339 Bacteria 1642
12 Ga0070689_100643847 3300005340 Bacteria 921
13 Ga0070668_100298960 3300005347 Bacteria 1349
14 Ga0070669_100007800 3300005353 Bacteria 7648
15 Ga0070674_100289836 3300005356 Bacteria 1301
16 Ga0070673_100018592 3300005364 Bacteria 4969
17 Ga0070701_10474592 3300005438 Bacteria 807
18 Ga0070663_100019278 3300005455 Bacteria 4493
19 Ga0070681_10058278 3300005458 Bacteria 3842
20 Ga0068867_100237030 3300005459 Bacteria 1478
21 Ga0070685_10245404 3300005466 Unclassified 1184
22 Ga0074250_12217 3300005473 Bacteria 1425
23 Ga0068853_100007269 3300005539 Bacteria 8868
24 Ga0070672_100094315 3300005543 Bacteria 2419
25 Ga0070686_100469549 3300005544 Unclassified 971
26 Ga0070665_100004663 3300005548 Bacteria 14320
27 Ga0068857_101626373 3300005577 Unclassified 631
28 Ga0068854_100863039 3300005578 Bacteria 793
29 Ga0068852_102138536 3300005616 Bacteria 581
30 Ga0068863_101475143 3300005841 Unclassified 688
31 Ga0068862_101717119 3300005844 Unclassified 636
32 Ga0075362_10083348 3300006177 Bacteria 1476
33 Ga0068871_100275905 3300006358 Bacteria 1469
34 Ga0105251_10046271 3300009011 Bacteria 2094
35 Ga0105251_10121721 3300009011 Bacteria 1185
36 Ga0105251_10162687 3300009011 Bacteria 1006
37 Ga0105251_10172934 3300009011 Bacteria 973
38 Ga0105244_10014301 3300009036 Bacteria 4595
39 Ga0105244_10088740 3300009036 Bacteria 1522
40 Ga0105244_10088837 3300009036 Bacteria 1521
41 Ga0105240_10026186 3300009093 Bacteria 7652
42 Ga0105240_10053651 3300009093 Bacteria 5059
43 Ga0105247_10004537 3300009101 Bacteria 8851
44 Ga0105247_10053985 3300009101 Bacteria 2480
45 Ga0105243_10000263 3300009148 Bacteria 59080
46 Ga0157373_10158567 3300013100 Bacteria 1592
47 Ga0157371_10041782 3300013102 Bacteria 3271
48 Ga0157370_10060906 3300013104 Bacteria 3582
49 Ga0157370_10375432 3300013104 Bacteria 1310
50 Ga0157370_10562723 3300013104 Bacteria 1045
51 Ga0157370_11297418 3300013104 Bacteria 656
52 Ga0157369_10061811 3300013105 Bacteria 4037
53 Ga0157374_10272120 3300013296 Unclassified 1670
54 Ga0157372_11053218 3300013307 Bacteria 941
55 Ga0157375_10767962 3300013308 Unclassified 1114
56 Ga0163163_10295457 3300014325 Unclassified 1672
57 Ga0157380_10026461 3300014326 Bacteria 4404
58 Ga0157380_10236610 3300014326 Bacteria 1644
59 Ga0157376_10050131 3300014969 Bacteria 3462
60 Ga0163161_10010551 3300017792 Bacteria 6398
61 Ga0163161_10012349 3300017792 Bacteria 5929
62 Ga0207696_1014948 3300025711 Bacteria 2644
63 Ga0207696_1020638 3300025711 Bacteria 2121
64 Ga0207655_1014210 3300025728 Bacteria 4515
65 Ga0207655_1014306 3300025728 Bacteria 4494
66 Ga0207655_1018711 3300025728 Bacteria 3659
67 Ga0207713_1001489 3300025735 Bacteria 18523
68 Ga0207713_1029929 3300025735 Bacteria 2430
69 Ga0207710_10000455 3300025900 Bacteria 26350
70 Ga0207710_10014846 3300025900 Bacteria 3289
71 Ga0207688_10042873 3300025901 Bacteria 2519
72 Ga0207645_10070246 3300025907 Bacteria 2240
73 Ga0207695_10034286 3300025913 Bacteria 5523
74 Ga0207657_10004905 3300025919 Bacteria 14072
75 Ga0207652_10423546 3300025921 Bacteria 1200
76 Ga0207681_10000495 3300025923 Bacteria 27581
77 Ga0207690_10313214 3300025932 Bacteria 1231
78 Ga0207709_10000158 3300025935 Bacteria 91810
79 Ga0207691_10067510 3300025940 Bacteria 3233
80 Ga0207711_10499030 3300025941 Bacteria 1134
81 Ga0207667_10065638 3300025949 Bacteria 3785
82 Ga0207651_10011322 3300025960 Bacteria 4990
83 Ga0207651_10377386 3300025960 Bacteria 1201
84 Ga0207668_10105839 3300025972 Bacteria 2100
85 Ga0207658_10260563 3300025986 Bacteria 1478
86 Ga0207677_10421475 3300026023 Bacteria 1137
87 Ga0207639_10595420 3300026041 Bacteria 1019
88 Ga0207678_10132925 3300026067 Bacteria 2123
89 Ga0207641_11484740 3300026088 Unclassified 679
90 Ga0207676_10661897 3300026095 Bacteria 1009
91 Ga0207674_10697993 3300026116 Bacteria 980
92 Ga0207683_11486790 3300026121 Bacteria 626
93 Ga0209371_1000196 3300027312 Bacteria 89093
94 Ga0268266_10007323 3300028379 Bacteria 9973
95 Ga0268266_10809916 3300028379 Bacteria 905
96 Ga0268265_11625615 3300028380 Bacteria 651
97 Ga0268256_1000158 3300030500 Bacteria 89061
98 Ga0265327_10090977 3300031251 Bacteria 1488
99 Ga0307408_100099336 3300031548 Bacteria 2215
100 Ga0307408_100349513 3300031548 Bacteria 1254
101 Ga0307406_11290872 3300031901 Bacteria 637
102 Ga0307407_10040581 3300031903 Bacteria 2597
103 Ga0307416_100003550 3300032002 Bacteria 9194
104 Ga0307414_10017486 3300032004 Bacteria 4389
105 Ga0395899_0006427 3300037312 Bacteria 9106
106 Ga0395900_0455246 3300037418 Bacteria 1235
107 Ga0395905_0071207 3300037471 Bacteria 3260
108 Ga0395905_0928861 3300037471 Bacteria 773
109 Ga0439466_0004544 3300041411 Bacteria 5330
110 Ga0450888_037160 3300042126 Bacteria 668
111 Ga0451577_0008279 3300042876 Bacteria 10126
112 Ga0451577_1158678 3300042876 Bacteria 690
113 Ga0451577_1329942 3300042876 Bacteria 639
114 Ga0466965_0067320 3300044683 Bacteria 1797
115 Ga0466965_0086668 3300044683 Bacteria 1589
116 Ga0453684_0003051 3300044712 Bacteria 38906
117 Ga0453684_1579323 3300044712 Unclassified 674
118 Ga0466957_0597590 3300044842 Bacteria 772
119 Ga0451576_0121761 3300045051 Bacteria 2716
120 Ga0451576_0585245 3300045051 Bacteria 1173
121 Ga0466967_0289637 3300045976 Bacteria 1573
122 Ga0495627_005662 3300046453 Bacteria 4992
123 Ga0495638_0049476 3300046460 Bacteria 2628
124 Ga0495638_0080269 3300046460 Bacteria 1982
125 Ga0495650_0002446 3300046471 Bacteria 15012
126 Ga0495607_0032086 3300046501 Bacteria 3209
127 Ga0495616_0109408 3300046513 Bacteria 1285
128 Ga0495616_0109527 3300046513 Bacteria 1284
129 Ga0495632_0039192 3300046519 Bacteria 2393
130 Ga0495663_0003137 3300046525 Bacteria 4824
131 Ga0495663_0003340 3300046525 Bacteria 4646
132 Ga0495663_0011672 3300046525 Bacteria 2444
133 Ga0495663_0145365 3300046525 Bacteria 806
134 Ga0495621_0139372 3300046539 Bacteria 948
135 Ga0495633_0044505 3300046558 Bacteria 2103
136 Ga0495625_0071839 3300046660 Bacteria 2428
137 Ga0495649_0278774 3300046694 Bacteria 854
138 Ga0495681_0045377 3300047470 Bacteria 2104
139 Ga0495681_0045635 3300047470 Bacteria 2095
140 Ga0496108_1283689 3300048911 Unclassified 616
141 Ga0495682_0008116 3300049460 Bacteria 4145
142 Ga0501040_0152833 3300049576 Bacteria 1629
143 Ga0501042_1128680 3300049578 Unclassified 571
144 Ga0501046_0348466 3300049580 Unclassified 1076
145 Ga0501067_0006373 3300049583 Bacteria 6534
146 Ga0501068_0001172 3300049584 Bacteria 13929
147 Ga0501069_0268375 3300049585 Bacteria 997
148 Ga0501070_0039322 3300049586 Bacteria 3946
149 Ga0501071_0035496 3300049587 Bacteria 3551
150 Ga0501071_0589608 3300049587 Unclassified 854
151 Ga0501072_0243584 3300049588 Bacteria 1432
152 Ga0501073_0001217 3300049589 Bacteria 18755
153 Ga0501074_0015626 3300049590 Bacteria 5517
154 Ga0501075_0603185 3300049591 Bacteria 837
155 Ga0501077_0004047 3300049593 Bacteria 8852
156 Ga0501207_115753 3300049654 Unclassified 552
157 Ga0501079_0002929 3300049741 Bacteria 12466
158 Ga0501079_0113500 3300049741 Bacteria 2106
159 Ga0501080_0021085 3300049742 Bacteria 6031
160 Ga0501083_0025848 3300049744 Bacteria 4064
161 nmdc:mga0qj67_495440_c1 3300050509 Bacteria 982
162 Ga0500644_0082191 3300053088 Bacteria 1187
163 Ga0501084_0004559 3300054114 Bacteria 11325
164 Ga0501084_0631787 3300054114 Bacteria 904
165 Ga0590071_002639 3300059421 Bacteria 4506
166 Ga0590074_020249 3300059423 Bacteria 1144
167 Ga0590075_003572 3300059424 Bacteria 3690
168 Ga0590077_006849 3300059426 Bacteria 2334
169 Ga0501082_0008709 3300060353 Bacteria 8748
170 Ga0530510_0298659 3300061734 Bacteria 1205
171 2552746420 2551306352 Bacteria 3873115
172 2603867542 2602042109 Bacteria 5152801
173 2640736440 2639762793 Bacteria 3943681
174 2644031094 2643221603 Bacteria 6147767
175 2678229667 2675903507 Bacteria 3737791
176 2774391360 2773857761 Bacteria 3837365
177 2774436094 2773857770 Bacteria 3911866
178 2858692244 2858688981 Bacteria 8184122
179 2919185235 2919182534 Bacteria 3907101
180 8019563048 8019555841 Bacteria 9642137
181 Ga0495625_0017236
182 SwRhRL2b_contig_956066
183 rootH2_10126942
184 rootL2_10097714
185 Ga0058692_1000067
186 Ga0065703_1000507
187 Ga0065704_10000472
188 Ga0065704_10172824
189 Ga0070677_10331040
190 Ga0070680_100502872
191 Ga0070660_100194746
192 Ga0070689_100643847
193 Ga0070668_100298960
194 Ga0070669_100007800
195 Ga0070674_100289836
196 Ga0070673_100018592
197 Ga0070701_10474592
198 Ga0070663_100019278
199 Ga0070681_10058278
200 Ga0068867_100237030
201 Ga0070685_10245404
202 Ga0074250_12217
203 Ga0068853_100007269
204 Ga0070672_100094315
205 Ga0070686_100469549
206 Ga0070665_100004663
207 Ga0068857_101626373
208 Ga0068854_100863039
209 Ga0068852_102138536
210 Ga0068863_101475143
211 Ga0068862_101717119
212 Ga0075362_10083348
213 Ga0068871_100275905
214 Ga0105251_10046271
215 Ga0105251_10121721
216 Ga0105251_10162687
217 Ga0105251_10172934
218 Ga0105244_10014301
219 Ga0105244_10088740
220 Ga0105244_10088837
221 Ga0105240_10026186
222 Ga0105240_10053651
223 Ga0105247_10004537
224 Ga0105247_10053985
225 Ga0105243_10000263
226 Ga0157373_10158567
227 Ga0157371_10041782
228 Ga0157370_10060906
229 Ga0157370_10375432
230 Ga0157370_10562723
231 Ga0157370_11297418
232 Ga0157369_10061811
233 Ga0157374_10272120
234 Ga0157372_11053218
235 Ga0157375_10767962
236 Ga0163163_10295457
237 Ga0157380_10026461
238 Ga0157380_10236610
239 Ga0157376_10050131
240 Ga0163161_10010551
241 Ga0163161_10012349
242 Ga0207696_1014948
243 Ga0207696_1020638
244 Ga0207655_1014210
245 Ga0207655_1014306
246 Ga0207655_1018711
247 Ga0207713_1001489
248 Ga0207713_1029929
249 Ga0207710_10000455
250 Ga0207710_10014846
251 Ga0207688_10042873
252 Ga0207645_10070246
253 Ga0207695_10034286
254 Ga0207657_10004905
255 Ga0207652_10423546
256 Ga0207681_10000495
257 Ga0207690_10313214
258 Ga0207709_10000158
259 Ga0207691_10067510
260 Ga0207711_10499030
261 Ga0207667_10065638
262 Ga0207651_10011322
263 Ga0207651_10377386
264 Ga0207668_10105839
265 Ga0207658_10260563
266 Ga0207677_10421475
267 Ga0207639_10595420
268 Ga0207678_10132925
269 Ga0207641_11484740
270 Ga0207676_10661897
271 Ga0207674_10697993
272 Ga0207683_11486790
273 Ga0209371_1000196
274 Ga0268266_10007323
275 Ga0268266_10809916
276 Ga0268265_11625615
277 Ga0268256_1000158
278 Ga0265327_10090977
279 Ga0307408_100099336
280 Ga0307408_100349513
281 Ga0307406_11290872
282 Ga0307407_10040581
283 Ga0307416_100003550
284 Ga0307414_10017486
285 Ga0395899_0006427
286 Ga0395900_0455246
287 Ga0395905_0071207
288 Ga0395905_0928861
289 Ga0439466_0004544
290 Ga0450888_037160
291 Ga0451577_0008279
292 Ga0451577_1158678
293 Ga0451577_1329942
294 Ga0466965_0067320
295 Ga0466965_0086668
296 Ga0453684_0003051
297 Ga0453684_1579323
298 Ga0466957_0597590
299 Ga0451576_0121761
300 Ga0451576_0585245
301 Ga0466967_0289637
302 Ga0495627_005662
303 Ga0495638_0049476
304 Ga0495638_0080269
305 Ga0495650_0002446
306 Ga0495607_0032086
307 Ga0495616_0109408
308 Ga0495616_0109527
309 Ga0495632_0039192
310 Ga0495663_0003137
311 Ga0495663_0003340
312 Ga0495663_0011672
313 Ga0495663_0145365
314 Ga0495621_0139372
315 Ga0495633_0044505
316 Ga0495625_0071839
317 Ga0495649_0278774
318 Ga0495681_0045377
319 Ga0495681_0045635
320 Ga0496108_1283689
321 Ga0495682_0008116
322 Ga0501040_0152833
323 Ga0501042_1128680
324 Ga0501046_0348466
325 Ga0501067_0006373
326 Ga0501068_0001172
327 Ga0501069_0268375
328 Ga0501070_0039322
329 Ga0501071_0035496
330 Ga0501071_0589608
331 Ga0501072_0243584
332 Ga0501073_0001217
333 Ga0501074_0015626
334 Ga0501075_0603185
335 Ga0501077_0004047
336 Ga0501207_115753
337 Ga0501079_0002929
338 Ga0501079_0113500
339 Ga0501080_0021085
340 Ga0501083_0025848
341 nmdc:mga0qj67_495440_c1
342 Ga0500644_0082191
343 Ga0501084_0004559
344 Ga0501084_0631787
345 Ga0590071_002639
346 Ga0590074_020249
347 Ga0590075_003572
348 Ga0590077_006849
349 Ga0501082_0008709
350 Ga0530510_0298659
351 2552746420
352 2603867542
353 2640736440
354 2644031094
355 2678229667
356 2774391360
357 2774436094
358 2858692244
359 2919185235
360 8019563048

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11158

DUF2938

Protein of unknown function (DUF2938)

24

174

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sqw-assembly1.cif.gz_A mouse dctpase in complex with 5-me-dcmp 0.3217 83 163
1rhg-assembly1.cif.gz_B the structure of granulocyte-colony-stimulating factor and its relationship to those of other growth factors 0.3173 3 164
6kji-assembly2.cif.gz_B crystal structure of psof with sah 0.3152 2 97
5ogk-assembly1.cif.gz_B crystal structure of a nucleotide sugar transporter with bound nucleotide sugar. 0.3148 8 162
1rhg-assembly1.cif.gz_B the structure of granulocyte-colony-stimulating factor and its relationship to those of other growth factors 0.3142 3 164
ID Description Score Start End Superfamily
af_Q9VDM3_17_287_1.50.40.10 Mainly Alpha;Alpha/alpha barrel;Mitochondrial carrier fold;Mitochondrial carrier domain 0.4455 67 167 1.50.40.10
af_P96937_215_306_1.20.1270.50 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Glycoside hydrolase family 38, central domain 0.4288 3 83 1.20.1270.50
af_P96937_215_306_1.20.1270.50 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Glycoside hydrolase family 38, central domain 0.3836 3 83 1.20.1270.50
af_K7MLI2_277_432_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3734 18 159 1.20.1250.20
af_Q58247_43_183_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.3633 14 85 1.10.3210.10
ID Description Score Start End GO Terms
AF-A0A2M8U0S8-F1-model_v4 DUF2938 domain-containing protein 0.9868 4 163 GO:0016020
AF-A0A1Y1SAJ6-F1-model_v4 DUF2938 domain-containing protein 0.986 8 164 GO:0016020
AF-A0A4V3D7P9-F1-model_v4 DUF2938 family protein 0.9845 5 164 GO:0016020
AF-A0A2T0NZ72-F1-model_v4 deleted 0.9838 7 164
AF-A0A430H978-F1-model_v4 DUF2938 domain-containing protein 0.9832 7 167 GO:0016020

Map