F275825

General Info

Members Datasets Scaffolds Average Seq Length
180 137 360 893

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10000690|Ga0265320_1000069015
Length 961
Sequence MPRKSKRTPTSPDSSANPPSGSIFLPERVVHAADESQVGITHPPVHHPKPGTRFAKIAPAPARGPAAMDDTTETPEGQRLADDATRHKNWKRWGPYLSERQWATVREDYSATGECWEYFPHDHARSRAYRWGEDGLMGWSDRECRLCFGLALWNGKDPILKERLFGLTNAEGNHGEDVKELYYYLDSTPTHSFARALYKYPQAEFPYERLVAENKSRGIDAREFEITDTGVFDANKYFDVFAVFAKEGPNDTLIRLRIANRGPDAAKIHVLPTVWFRNTWVWGCRYEGCTLKPRLFMSGDGVVHAEHQDLEPFLFAADKVDGQPAPEWIFTENETNTERLYGLPQYTPYVKDAFHERVVHNREAAVNPLKTGTKAAAWYQLNIPAGEEVIIHLRLTSQREAPLKLFGPSFDEIIADRESEMNEYYHLLRRSSGAMGDQHLQVMRQGLAGLLWSKQFYHYSVRDWLDGDPSQPKPPAARLEGRNANWGHLFNRDIISMPDKWEYPWYAAWDLAFHMIPFSAVDPQFAKEQLLLLLREWYMHPSGKIPAYEFSFDDVNPPVHAWSCWRVYKMTAGKGQRDLNFLAQAFHKLLINFTWWVNRKDPEGNNVFGGGFLGMDNIGAFDRNIVLPGGGHLEQADGTAWMAFYCGTMLAMALELAGYDDSYEGVASKFFEHYITIADAMNTLGGTGLWNPDVGFYQDQISCQGTTLRLPVRSLVGLIPLLAVEVLDEEVIARLPQFGKRMRWFLDHRPDLRQHISCMEQGGVRTGKMLLAIPARDRLERVLKYVFDENEFLSPHGLRSVSKVHAEHPARIVLDGREYSVDYVPGESTTRLFGGNSNWRGPIWFPANYLLMEALQRYDFFYGDGLMVECPTGSGHHVTLGEAADEIGRRLVSVFLPDATGKRPCHGEDARYAKDPNYKDLILFYEYFHGDTGRGCGASHQTGWTGLAVKIIQELAHRGKL

Samples

Sample ID Description Type Environment
1 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
82 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
132 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
133 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
134 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
135 2902330777 Methylobacterium sp. 2A Isolate Unclassified
136 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
137 2928125067 Methylobacterium sp. 1973 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.56
Metatranscriptomes 0.56
Isolates 3.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.33
Rhizosphere 86.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265320_10000690 3300031240 Bacteria 25733
2 LJNas_1000242 3300000546 Bacteria 9390
3 JGI25406J46586_10008419 3300003203 Bacteria 4674
4 Ga0070658_10006098 3300005327 Bacteria 9774
5 Ga0070676_10014082 3300005328 Bacteria 4389
6 Ga0070683_100070229 3300005329 Bacteria 3267
7 Ga0070690_100015831 3300005330 Bacteria 4506
8 Ga0070689_100001219 3300005340 Bacteria 16322
9 Ga0070689_100005393 3300005340 Bacteria 8721
10 Ga0070692_10002746 3300005345 Bacteria 6922
11 Ga0070668_100013990 3300005347 Bacteria 5999
12 Ga0070671_100000611 3300005355 Bacteria 25513
13 Ga0070671_100000617 3300005355 Bacteria 25437
14 Ga0070714_100000736 3300005435 Bacteria 23197
15 Ga0070713_100012948 3300005436 Bacteria 6140
16 Ga0070713_100038684 3300005436 Bacteria 3867
17 Ga0070708_100001210 3300005445 Bacteria 19863
18 Ga0070662_100011510 3300005457 Bacteria 5838
19 Ga0070681_10025367 3300005458 Bacteria 5963
20 Ga0070698_100048035 3300005471 Bacteria 4361
21 Ga0070699_100020205 3300005518 Bacteria 5741
22 Ga0070699_100039291 3300005518 Bacteria 4097
23 Ga0070679_100001004 3300005530 Bacteria 24601
24 Ga0070697_100014309 3300005536 Bacteria 6235
25 Ga0070672_100045756 3300005543 Bacteria 3387
26 Ga0070704_100010714 3300005549 Bacteria 5584
27 Ga0068855_100027406 3300005563 Bacteria 6815
28 Ga0070664_100036291 3300005564 Bacteria 4140
29 Ga0068857_100015997 3300005577 Bacteria 6572
30 Ga0068859_100001924 3300005617 Bacteria 21182
31 Ga0068859_100015380 3300005617 Bacteria 7687
32 Ga0068859_100032202 3300005617 Bacteria 5266
33 Ga0068859_100036216 3300005617 Bacteria 4954
34 Ga0068864_100007748 3300005618 Bacteria 8849
35 Ga0068861_100020052 3300005719 Bacteria 4782
36 Ga0068863_100002228 3300005841 Bacteria 19241
37 Ga0068858_100006188 3300005842 Bacteria 11675
38 Ga0068858_100059490 3300005842 Bacteria 3531
39 Ga0068860_100008915 3300005843 Bacteria 9994
40 Ga0068862_100001266 3300005844 Bacteria 23760
41 Ga0068862_100004561 3300005844 Bacteria 11675
42 Ga0068862_100016073 3300005844 Bacteria 6223
43 Ga0081455_10000935 3300005937 Bacteria 37321
44 Ga0081539_10000042 3300005985 Bacteria 289955
45 Ga0097621_100008344 3300006237 Bacteria 7456
46 Ga0068871_100001430 3300006358 Bacteria 15989
47 Ga0075428_100019565 3300006844 Bacteria 7492
48 Ga0075428_100027403 3300006844 Bacteria 6305
49 Ga0075431_100007820 3300006847 Bacteria 10651
50 Ga0075431_100010926 3300006847 Bacteria 9134
51 Ga0075433_10006530 3300006852 Bacteria 9227
52 Ga0075433_10054250 3300006852 Bacteria 3496
53 Ga0075434_100002684 3300006871 Bacteria 15707
54 Ga0075434_100007865 3300006871 Bacteria 9878
55 Ga0075434_100033802 3300006871 Bacteria 5048
56 Ga0097620_100001924 3300006931 Bacteria 21182
57 Ga0097620_100015380 3300006931 Bacteria 7687
58 Ga0097620_100032201 3300006931 Bacteria 5266
59 Ga0097620_100036216 3300006931 Bacteria 4954
60 Ga0105240_10010868 3300009093 Bacteria 12751
61 Ga0105240_10011215 3300009093 Bacteria 12501
62 Ga0111539_10020058 3300009094 Bacteria 8235
63 Ga0111539_10031422 3300009094 Bacteria 6450
64 Ga0105245_10001242 3300009098 Bacteria 23006
65 Ga0105245_10009721 3300009098 Bacteria 8386
66 Ga0105247_10000329 3300009101 Bacteria 41935
67 Ga0114129_10002714 3300009147 Bacteria 24652
68 Ga0114129_10062776 3300009147 Bacteria 5189
69 Ga0105238_10005850 3300009551 Bacteria 12179
70 Ga0105249_10003215 3300009553 Bacteria 14145
71 Ga0157370_10000979 3300013104 Bacteria 36192
72 Ga0157374_10000047 3300013296 Bacteria 137075
73 Ga0157374_10002697 3300013296 Bacteria 14920
74 Ga0157378_10000318 3300013297 Bacteria 47296
75 Ga0163162_10015774 3300013306 Bacteria 7384
76 Ga0163162_10066338 3300013306 Bacteria 3658
77 Ga0157375_10019537 3300013308 Bacteria 6166
78 Ga0163163_10003004 3300014325 Bacteria 14270
79 Ga0157380_10007001 3300014326 Bacteria 7986
80 Ga0157379_10000231 3300014968 Bacteria 43544
81 Ga0157376_10000234 3300014969 Bacteria 38651
82 Ga0213875_10005811 3300021388 Bacteria 6564
83 Ga0207710_10000306 3300025900 Bacteria 38926
84 Ga0207705_10005228 3300025909 Bacteria 9729
85 Ga0207695_10003279 3300025913 Bacteria 22995
86 Ga0207652_10034172 3300025921 Bacteria 4284
87 Ga0207646_10032442 3300025922 Bacteria 4727
88 Ga0207687_10000650 3300025927 Bacteria 23358
89 Ga0207687_10004033 3300025927 Bacteria 9838
90 Ga0207644_10002545 3300025931 Bacteria 11736
91 Ga0207644_10022688 3300025931 Bacteria 4290
92 Ga0207670_10021863 3300025936 Bacteria 3953
93 Ga0207691_10013179 3300025940 Bacteria 7917
94 Ga0207712_10001598 3300025961 Bacteria 15254
95 Ga0207703_10002157 3300026035 Bacteria 17300
96 Ga0207702_10071790 3300026078 Bacteria 2982
97 Ga0207641_10007402 3300026088 Bacteria 9132
98 Ga0207674_10011333 3300026116 Bacteria 10018
99 Ga0207674_10017486 3300026116 Bacteria 7823
100 Ga0207675_100001793 3300026118 Bacteria 21479
101 Ga0207675_100004213 3300026118 Bacteria 13918
102 Ga0207675_100018190 3300026118 Bacteria 6552
103 Ga0207675_100038865 3300026118 Bacteria 4440
104 Ga0209970_1000899 3300027614 Bacteria 5238
105 Ga0209983_1000440 3300027665 Bacteria 8974
106 Ga0209971_1000711 3300027682 Bacteria 8568
107 Ga0209974_10000244 3300027876 Bacteria 17535
108 Ga0268265_10007103 3300028380 Bacteria 7562
109 Ga0268264_10014451 3300028381 Bacteria 6488
110 Ga0307515_10001546 3300028794 Bacteria 51463
111 Ga0307511_10001403 3300030521 Bacteria 25429
112 Ga0265760_10002253 3300031090 Bacteria 5637
113 Ga0265320_10000058 3300031240 Bacteria 102441
114 Ga0265320_10000257 3300031240 Bacteria 43727
115 Ga0265320_10004028 3300031240 Bacteria 9655
116 Ga0265325_10000473 3300031241 Bacteria 29138
117 Ga0265339_10000472 3300031249 Bacteria 31419
118 Ga0265331_10000557 3300031250 Bacteria 33770
119 Ga0307509_10000019 3300031507 Bacteria 256151
120 Ga0307408_100008984 3300031548 Bacteria 6602
121 Ga0265313_10000885 3300031595 Bacteria 30245
122 Ga0307508_10014702 3300031616 Bacteria 7138
123 Ga0265314_10000051 3300031711 Bacteria 188851
124 Ga0265342_10003670 3300031712 Bacteria 12463
125 Ga0307406_10002105 3300031901 Bacteria 10846
126 Ga0307409_100011099 3300031995 Bacteria 5654
127 Ga0307416_100015864 3300032002 Bacteria 5218
128 Ga0307414_10000013 3300032004 Bacteria 310222
129 Ga0307414_10007844 3300032004 Bacteria 6020
130 Ga0373934_0010875 3300035086 Bacteria 3421
131 Ga0373936_0000005 3300035113 Bacteria 325848
132 Ga0373961_0000819 3300035241 Bacteria 10570
133 Ga0373937_0010236 3300036401 Bacteria 8184
134 Ga0373937_0043887 3300036401 Bacteria 4083
135 Ga0373925_0021913 3300037068 Bacteria 4658
136 Ga0436364_0056556 3300037853 Bacteria 14344
137 Ga0436364_0060639 3300037853 Bacteria 41482
138 Ga0436364_1185156 3300037853 Bacteria 9964
139 Ga0436364_1193450 3300037853 Bacteria 24753
140 Ga0436365_1785808 3300039437 Bacteria 42876
141 Ga0436361_0192256 3300039447 Bacteria 3121
142 Ga0451576_0042599 3300045051 Bacteria 4792
143 Ga0495638_0005208 3300046460 Bacteria 9717
144 Ga0495580_0000066 3300046472 Bacteria 63213
145 Ga0495630_0004734 3300046517 Bacteria 9546
146 Ga0495665_0040001 3300046531 Bacteria 2497
147 Ga0495668_0000315 3300046616 Bacteria 66526
148 Ga0495657_0034012 3300046675 Bacteria 3544
149 Ga0495604_0015183 3300047317 Bacteria 6148
150 Ga0495675_0010613 3300047444 Bacteria 5758
151 Ga0495684_0012888 3300047471 Bacteria 6454
152 Ga0495686_0000178 3300047472 Bacteria 121468
153 Ga0496102_0049968 3300048905 Bacteria 3807
154 Ga0496104_0000053 3300048907 Bacteria 135895
155 Ga0496112_0016043 3300048915 Bacteria 7005
156 Ga0496112_0056596 3300048915 Bacteria 3860
157 Ga0496114_0007333 3300048917 Bacteria 8706
158 Ga0496114_0033477 3300048917 Bacteria 4234
159 Ga0496121_0004613 3300048924 Bacteria 18354
160 Ga0496125_0000006 3300048928 Bacteria 759385
161 Ga0496125_0008352 3300048928 Bacteria 10858
162 Ga0501046_0000094 3300049580 Bacteria 96222
163 Ga0501075_0025496 3300049591 Bacteria 4344
164 Ga0501227_000499 3300049665 Bacteria 8408
165 Ga0501044_0068114 3300049823 Bacteria 3626
166 nmdc:mga0qj67_5891_c1 3300050509 Bacteria 8980
167 nmdc:mga06r32_6261_c1 3300050510 Bacteria 10685
168 nmdc:mga08y16_37385_c1 3300050511 Bacteria 5099
169 nmdc:mga0n895_25523_c1 3300050512 Bacteria 5584
170 nmdc:mga0n895_3329_c1 3300050512 Bacteria 12917
171 nmdc:mga0a205_21999_c1 3300050515 Bacteria 6033
172 nmdc:mga0a205_4584_c1 3300050515 Bacteria 12396
173 Ga0501082_0028062 3300060353 Bacteria 4849
174 2596375734 2595698237 Bacteria 6712432
175 2687236406 2684623219 Bacteria 8442773
176 2889310633 2889306138 Bacteria 6358934
177 2889420916 2889415604 Bacteria 8048700
178 2902334783 2902330777 Bacteria 6395352
179 2902405248 2902405164 Bacteria 6784948
180 2928129279 2928125067 Bacteria 5937560
181 Ga0265320_10000690
182 LJNas_1000242
183 JGI25406J46586_10008419
184 Ga0070658_10006098
185 Ga0070676_10014082
186 Ga0070683_100070229
187 Ga0070690_100015831
188 Ga0070689_100001219
189 Ga0070689_100005393
190 Ga0070692_10002746
191 Ga0070668_100013990
192 Ga0070671_100000611
193 Ga0070671_100000617
194 Ga0070714_100000736
195 Ga0070713_100012948
196 Ga0070713_100038684
197 Ga0070708_100001210
198 Ga0070662_100011510
199 Ga0070681_10025367
200 Ga0070698_100048035
201 Ga0070699_100020205
202 Ga0070699_100039291
203 Ga0070679_100001004
204 Ga0070697_100014309
205 Ga0070672_100045756
206 Ga0070704_100010714
207 Ga0068855_100027406
208 Ga0070664_100036291
209 Ga0068857_100015997
210 Ga0068859_100001924
211 Ga0068859_100015380
212 Ga0068859_100032202
213 Ga0068859_100036216
214 Ga0068864_100007748
215 Ga0068861_100020052
216 Ga0068863_100002228
217 Ga0068858_100006188
218 Ga0068858_100059490
219 Ga0068860_100008915
220 Ga0068862_100001266
221 Ga0068862_100004561
222 Ga0068862_100016073
223 Ga0081455_10000935
224 Ga0081539_10000042
225 Ga0097621_100008344
226 Ga0068871_100001430
227 Ga0075428_100019565
228 Ga0075428_100027403
229 Ga0075431_100007820
230 Ga0075431_100010926
231 Ga0075433_10006530
232 Ga0075433_10054250
233 Ga0075434_100002684
234 Ga0075434_100007865
235 Ga0075434_100033802
236 Ga0097620_100001924
237 Ga0097620_100015380
238 Ga0097620_100032201
239 Ga0097620_100036216
240 Ga0105240_10010868
241 Ga0105240_10011215
242 Ga0111539_10020058
243 Ga0111539_10031422
244 Ga0105245_10001242
245 Ga0105245_10009721
246 Ga0105247_10000329
247 Ga0114129_10002714
248 Ga0114129_10062776
249 Ga0105238_10005850
250 Ga0105249_10003215
251 Ga0157370_10000979
252 Ga0157374_10000047
253 Ga0157374_10002697
254 Ga0157378_10000318
255 Ga0163162_10015774
256 Ga0163162_10066338
257 Ga0157375_10019537
258 Ga0163163_10003004
259 Ga0157380_10007001
260 Ga0157379_10000231
261 Ga0157376_10000234
262 Ga0213875_10005811
263 Ga0207710_10000306
264 Ga0207705_10005228
265 Ga0207695_10003279
266 Ga0207652_10034172
267 Ga0207646_10032442
268 Ga0207687_10000650
269 Ga0207687_10004033
270 Ga0207644_10002545
271 Ga0207644_10022688
272 Ga0207670_10021863
273 Ga0207691_10013179
274 Ga0207712_10001598
275 Ga0207703_10002157
276 Ga0207702_10071790
277 Ga0207641_10007402
278 Ga0207674_10011333
279 Ga0207674_10017486
280 Ga0207675_100001793
281 Ga0207675_100004213
282 Ga0207675_100018190
283 Ga0207675_100038865
284 Ga0209970_1000899
285 Ga0209983_1000440
286 Ga0209971_1000711
287 Ga0209974_10000244
288 Ga0268265_10007103
289 Ga0268264_10014451
290 Ga0307515_10001546
291 Ga0307511_10001403
292 Ga0265760_10002253
293 Ga0265320_10000058
294 Ga0265320_10000257
295 Ga0265320_10004028
296 Ga0265325_10000473
297 Ga0265339_10000472
298 Ga0265331_10000557
299 Ga0307509_10000019
300 Ga0307408_100008984
301 Ga0265313_10000885
302 Ga0307508_10014702
303 Ga0265314_10000051
304 Ga0265342_10003670
305 Ga0307406_10002105
306 Ga0307409_100011099
307 Ga0307416_100015864
308 Ga0307414_10000013
309 Ga0307414_10007844
310 Ga0373934_0010875
311 Ga0373936_0000005
312 Ga0373961_0000819
313 Ga0373937_0010236
314 Ga0373937_0043887
315 Ga0373925_0021913
316 Ga0436364_0056556
317 Ga0436364_0060639
318 Ga0436364_1185156
319 Ga0436364_1193450
320 Ga0436365_1785808
321 Ga0436361_0192256
322 Ga0451576_0042599
323 Ga0495638_0005208
324 Ga0495580_0000066
325 Ga0495630_0004734
326 Ga0495665_0040001
327 Ga0495668_0000315
328 Ga0495657_0034012
329 Ga0495604_0015183
330 Ga0495675_0010613
331 Ga0495684_0012888
332 Ga0495686_0000178
333 Ga0496102_0049968
334 Ga0496104_0000053
335 Ga0496112_0016043
336 Ga0496112_0056596
337 Ga0496114_0007333
338 Ga0496114_0033477
339 Ga0496121_0004613
340 Ga0496125_0000006
341 Ga0496125_0008352
342 Ga0501046_0000094
343 Ga0501075_0025496
344 Ga0501227_000499
345 Ga0501044_0068114
346 nmdc:mga0qj67_5891_c1
347 nmdc:mga06r32_6261_c1
348 nmdc:mga08y16_37385_c1
349 nmdc:mga0n895_25523_c1
350 nmdc:mga0n895_3329_c1
351 nmdc:mga0a205_21999_c1
352 nmdc:mga0a205_4584_c1
353 Ga0501082_0028062
354 2596375734
355 2687236406
356 2889310633
357 2889420916
358 2902334783
359 2902405248
360 2928129279

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

768

945

0.85

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

503

748

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mhf-assembly1.cif.gz_A murine endoplasmic reticulum alpha-glucosidase i with n-9'-methoxynonyl-1-deoxynojirimycin. 0.6809 24 902
5mhf-assembly2.cif.gz_B murine endoplasmic reticulum alpha-glucosidase i with n-9'-methoxynonyl-1-deoxynojirimycin. 0.6737 24 902
5mhf-assembly4.cif.gz_D murine endoplasmic reticulum alpha-glucosidase i with n-9'-methoxynonyl-1-deoxynojirimycin. 0.6589 24 902
2ym9-assembly5.cif.gz_B sipd from salmonella typhimurium 0.6536 584 641
8e4i-assembly1.cif.gz_A co-crystal structure of chaetomium glucosidase with compound 6 0.6501 13 901
ID Description Score Start End Superfamily
af_Q5AED0_433_891_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9537 446 898 1.50.10.10
af_Q5AED0_433_891_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9394 446 898 1.50.10.10
af_Q04336_455_722_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9305 428 682 1.50.10.10
af_Q5AED0_9_368_2.70.98.40 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Glycoside hydrolase, family 65, N-terminal domain 0.922 10 381 2.70.98.40
af_Q5AED0_9_368_2.70.98.40 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Glycoside hydrolase, family 65, N-terminal domain 0.9145 10 381 2.70.98.40
ID Description Score Start End GO Terms
AF-A0A7C1VH85-F1-model_v4 Glucosidase 0.9767 719 900 GO:0004573
GO:0009311
AF-A0A4U0W135-F1-model_v4 Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106) (Glucosidase I) 0.976 719 905 GO:0004573
GO:0005789
GO:0006487
GO:0009311
AF-A0A1G5C7I5-F1-model_v4 Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain-containing protein 0.9758 735 901 GO:0004573
GO:0009311
AF-A0A1E4DKY4-F1-model_v4 Glycosyl hydrolase family 63 C-terminal domain-containing protein 0.9743 731 904 GO:0004573
GO:0009311
AF-A0A354BKL4-F1-model_v4 Glucosidase 0.9734 719 904 GO:0004573
GO:0009311

Map