F275330

General Info

Members Datasets Scaffolds Average Seq Length
180 116 360 447

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10018605|Ga0081539_100186053
Length 464
Sequence VEQTFSVAGRRVVVVGAARSGIAAAELLVRRGARVVLTETRDTFDAAARLRDRGVELELGGHTRDTLAGADLLVVSPGVPLEQSVFDVVRERGIETIGELELAWRWLRGRVIAITGTKGKSTTTTVIGRMVSAAGHHTLVGGNIGVPLSEQVDQSTPDTIHVVEVSSFQLETTTTFRPWIALWLNFSADHLDRHPSVDAYAAAKARIFANQQQDDWAVLNVEDAVVMQHAAAARARRILFAPSRGIDDPRLRRASDGQGFAVDGDWIVRRTSTAIEQLVPVSAVELTGRHMLGNVVAAVAVASAAGMPPESMVEGLREFHGLEHVMEPVGYVGGVRFVNDSKATNVEAARRSILSFDRNVVAVIGGRFKGGDLRELAGPLATRGRAVVAIGESAYQVYDALSSTLYVTFAGSMREAVERAYRAAQPDGVVLLAPACSSFDWFRDYAERGRAFKEEVGRLRESER

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
98 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
102 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
116 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.56
Rhizosphere 99.44
Stem 0
Stem Tuber 0
Unclassified 1.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10018605 3300005985 Bacteria 4811
2 JGI25406J46586_10041815 3300003203 Bacteria 1610
3 Ga0065714_10069427 3300005288 Bacteria 4193
4 Ga0065704_10001196 3300005289 Bacteria 10595
5 Ga0065707_10004484 3300005295 Bacteria 3191
6 Ga0070676_10019177 3300005328 Bacteria 3802
7 Ga0070683_100057265 3300005329 Bacteria 3621
8 Ga0070690_100034105 3300005330 Bacteria 3188
9 Ga0070670_100009920 3300005331 Bacteria 8132
10 Ga0070670_100124941 3300005331 Bacteria 2221
11 Ga0070677_10003450 3300005333 Bacteria 5102
12 Ga0070689_100050312 3300005340 Bacteria 3219
13 Ga0070668_100092781 3300005347 Bacteria 2382
14 Ga0070669_100087769 3300005353 Bacteria 2326
15 Ga0070675_100004309 3300005354 Bacteria 10846
16 Ga0070675_100058444 3300005354 Bacteria 3181
17 Ga0070675_100158268 3300005354 Bacteria 1946
18 Ga0070671_100002291 3300005355 Bacteria 14774
19 Ga0070674_100164658 3300005356 Bacteria 1685
20 Ga0070673_100071598 3300005364 Bacteria 2786
21 Ga0070673_100161047 3300005364 Bacteria 1908
22 Ga0070688_100016382 3300005365 Bacteria 4237
23 Ga0070688_100154838 3300005365 Bacteria 1569
24 Ga0070705_100001496 3300005440 Bacteria 12321
25 Ga0070705_100175110 3300005440 Unclassified 1448
26 Ga0070694_100000424 3300005444 Bacteria 23025
27 Ga0070694_100002043 3300005444 Bacteria 11980
28 Ga0070708_100107191 3300005445 Bacteria 2565
29 Ga0070678_100094149 3300005456 Bacteria 2305
30 Ga0068867_100009934 3300005459 Bacteria 6704
31 Ga0070707_100046010 3300005468 Bacteria 4175
32 Ga0070707_100087199 3300005468 Bacteria 3019
33 Ga0070698_100001728 3300005471 Bacteria 24359
34 Ga0070698_100040335 3300005471 Bacteria 4798
35 Ga0070699_100000346 3300005518 Bacteria 44833
36 Ga0070699_100001918 3300005518 Bacteria 18790
37 Ga0070672_100001114 3300005543 Bacteria 16406
38 Ga0070672_100208103 3300005543 Bacteria 1638
39 Ga0070686_100015790 3300005544 Bacteria 4383
40 Ga0070695_100001113 3300005545 Bacteria 14730
41 Ga0070695_100012837 3300005545 Bacteria 5029
42 Ga0070695_100030728 3300005545 Bacteria 3345
43 Ga0070696_100004969 3300005546 Bacteria 8880
44 Ga0070696_100027114 3300005546 Bacteria 3900
45 Ga0070704_100001449 3300005549 Bacteria 12703
46 Ga0070664_100019249 3300005564 Bacteria 5616
47 Ga0068857_100009481 3300005577 Bacteria 8454
48 Ga0068857_100023611 3300005577 Bacteria 5414
49 Ga0068856_100038368 3300005614 Bacteria 4703
50 Ga0068859_100001372 3300005617 Bacteria 24762
51 Ga0068859_100219148 3300005617 Bacteria 1990
52 Ga0068864_100027414 3300005618 Bacteria 4811
53 Ga0068861_100011110 3300005719 Bacteria 6252
54 Ga0068870_10003829 3300005840 Bacteria 6408
55 Ga0068858_100065411 3300005842 Bacteria 3364
56 Ga0068860_100007778 3300005843 Bacteria 10706
57 Ga0068862_100004806 3300005844 Bacteria 11375
58 Ga0081539_10000093 3300005985 Bacteria 207314
59 Ga0081539_10001946 3300005985 Bacteria 31597
60 Ga0068871_100114349 3300006358 Bacteria 2273
61 Ga0075428_100020892 3300006844 Bacteria 7249
62 Ga0075430_100021915 3300006846 Bacteria 5429
63 Ga0075431_100265892 3300006847 Bacteria 1739
64 Ga0075433_10005717 3300006852 Bacteria 9781
65 Ga0075433_10008272 3300006852 Bacteria 8290
66 Ga0075433_10141413 3300006852 Bacteria 2139
67 Ga0075434_100002621 3300006871 Bacteria 15861
68 Ga0075434_100006121 3300006871 Bacteria 11017
69 Ga0075434_100050784 3300006871 Bacteria 4120
70 Ga0075434_100051629 3300006871 Bacteria 4086
71 Ga0075434_100066501 3300006871 Bacteria 3590
72 Ga0075429_100055388 3300006880 Bacteria 3450
73 Ga0068865_100233918 3300006881 Bacteria 1443
74 Ga0097620_100001372 3300006931 Bacteria 24762
75 Ga0097620_100219157 3300006931 Bacteria 1990
76 Ga0075435_100007686 3300007076 Bacteria 7703
77 Ga0075435_100030153 3300007076 Bacteria 4262
78 Ga0075435_100031659 3300007076 Bacteria 4169
79 Ga0111539_10002555 3300009094 Bacteria 24100
80 Ga0111539_10007703 3300009094 Bacteria 13752
81 Ga0111539_10125122 3300009094 Unclassified 3013
82 Ga0114129_10006480 3300009147 Bacteria 16606
83 Ga0114129_10073574 3300009147 Bacteria 4761
84 Ga0114129_10096241 3300009147 Bacteria 4099
85 Ga0114129_10258709 3300009147 Bacteria 2334
86 Ga0105249_10008876 3300009553 Bacteria 8781
87 Ga0157375_10058511 3300013308 Bacteria 3813
88 Ga0157375_10077612 3300013308 Bacteria 3352
89 Ga0157380_10004184 3300014326 Bacteria 9975
90 Ga0157380_10115253 3300014326 Bacteria 2266
91 Ga0207682_10003068 3300025893 Bacteria 7333
92 Ga0207645_10055945 3300025907 Bacteria 2518
93 Ga0207643_10001578 3300025908 Bacteria 12923
94 Ga0207681_10004066 3300025923 Bacteria 9064
95 Ga0207650_10003821 3300025925 Bacteria 10301
96 Ga0207659_10001446 3300025926 Bacteria 14170
97 Ga0207659_10042828 3300025926 Bacteria 3176
98 Ga0207659_10189737 3300025926 Bacteria 1635
99 Ga0207700_10002261 3300025928 Bacteria 11058
100 Ga0207670_10010338 3300025936 Bacteria 5370
101 Ga0207670_10033714 3300025936 Bacteria 3302
102 Ga0207669_10003069 3300025937 Bacteria 7189
103 Ga0207691_10007158 3300025940 Bacteria 10763
104 Ga0207691_10145196 3300025940 Bacteria 2089
105 Ga0207661_10016042 3300025944 Bacteria 5523
106 Ga0207661_10105576 3300025944 Bacteria 2374
107 Ga0207651_10092875 3300025960 Bacteria 2214
108 Ga0207668_10078716 3300025972 Bacteria 2381
109 Ga0207703_10198893 3300026035 Bacteria 1780
110 Ga0207708_10184026 3300026075 Bacteria 1659
111 Ga0207708_10195506 3300026075 Bacteria 1612
112 Ga0207702_10012141 3300026078 Bacteria 7166
113 Ga0207648_10057448 3300026089 Bacteria 3395
114 Ga0207676_10015582 3300026095 Bacteria 5488
115 Ga0207676_10034216 3300026095 Bacteria 3846
116 Ga0207674_10019375 3300026116 Bacteria 7370
117 Ga0207675_100008016 3300026118 Bacteria 9953
118 Ga0207428_10000481 3300027907 Bacteria 48194
119 Ga0207428_10032668 3300027907 Bacteria 4278
120 Ga0268265_10001312 3300028380 Bacteria 21329
121 Ga0268264_10001604 3300028381 Bacteria 20930
122 Ga0307408_100016230 3300031548 Bacteria 4967
123 Ga0307405_10006445 3300031731 Bacteria 5774
124 Ga0307405_10048942 3300031731 Bacteria 2610
125 Ga0307413_10009725 3300031824 Bacteria 4618
126 Ga0307410_10001374 3300031852 Bacteria 10946
127 Ga0307410_10172953 3300031852 Bacteria 1629
128 Ga0307407_10006493 3300031903 Bacteria 5205
129 Ga0307412_10073726 3300031911 Bacteria 2336
130 Ga0307409_100003138 3300031995 Bacteria 8877
131 Ga0307409_100030607 3300031995 Bacteria 3870
132 Ga0307416_100002762 3300032002 Bacteria 10192
133 Ga0307416_100011391 3300032002 Bacteria 5927
134 Ga0307416_100086662 3300032002 Bacteria 2670
135 Ga0307414_10015053 3300032004 Bacteria 4660
136 Ga0307411_10010639 3300032005 Bacteria 4917
137 Ga0307411_10026142 3300032005 Bacteria 3510
138 Ga0307415_100023987 3300032126 Bacteria 3800
139 Ga0439435_0005369 3300042436 Bacteria 2816
140 Ga0451576_0040358 3300045051 Bacteria 4941
141 Ga0451576_0357885 3300045051 Bacteria 1528
142 Ga0495603_0013769 3300046455 Bacteria 4894
143 Ga0495629_0017451 3300046459 Bacteria 5143
144 Ga0495580_0084100 3300046472 Bacteria 2217
145 Ga0495584_0067184 3300046491 Bacteria 1803
146 Ga0495663_0007533 3300046525 Bacteria 3011
147 Ga0495642_0025221 3300046528 Bacteria 2355
148 Ga0495609_0049919 3300046538 Bacteria 1866
149 Ga0495645_0030626 3300046543 Bacteria 3920
150 Ga0495659_0001852 3300046664 Bacteria 6983
151 Ga0495659_0015761 3300046664 Bacteria 2487
152 Ga0495669_0009279 3300046684 Bacteria 4145
153 Ga0495636_0003559 3300047318 Bacteria 6039
154 Ga0495636_0064553 3300047318 Bacteria 1553
155 Ga0495676_0029983 3300047321 Bacteria 4624
156 Ga0496112_0325088 3300048915 Bacteria 1482
157 Ga0501041_0145375 3300049577 Bacteria 1479
158 nmdc:mga05p37_1033_c1 3300050507 Bacteria 31719
159 nmdc:mga05p37_184712_c1 3300050507 Bacteria 2535
160 nmdc:mga05p37_36225_c1 3300050507 Bacteria 6055
161 nmdc:mga09592_163962_c1 3300050508 Bacteria 1920
162 nmdc:mga09592_22345_c1 3300050508 Bacteria 5220
163 nmdc:mga0qj67_28643_c1 3300050509 Bacteria 4325
164 nmdc:mga08y16_23400_c1 3300050511 Bacteria 6527
165 nmdc:mga08y16_353_c1 3300050511 Bacteria 41478
166 nmdc:mga08y16_75635_c1 3300050511 Bacteria 3510
167 nmdc:mga08y16_98348_c1 3300050511 Bacteria 3047
168 nmdc:mga0n895_108563_c1 3300050512 Bacteria 2790
169 nmdc:mga0n895_1316_c1 3300050512 Bacteria 18393
170 nmdc:mga0n895_69113_c1 3300050512 Bacteria 3499
171 nmdc:mga0n895_9540_c1 3300050512 Bacteria 8500
172 nmdc:mga0rr50_130891_c1 3300050513 Bacteria 2009
173 nmdc:mga0rr50_3023_c1 3300050513 Bacteria 9617
174 nmdc:mga0a205_107867_c1 3300050515 Bacteria 2683
175 nmdc:mga0a205_1529_c1 3300050515 Bacteria 19766
176 nmdc:mga0a205_1881_c1 3300050515 Bacteria 18198
177 nmdc:mga0a205_203448_c1 3300050515 Bacteria 1870
178 Ga0501084_0200438 3300054114 Bacteria 1684
179 Ga0590071_000583 3300059421 Bacteria 10511
180 Ga0590074_000312 3300059423 Bacteria 6728
181 Ga0081539_10018605
182 JGI25406J46586_10041815
183 Ga0065714_10069427
184 Ga0065704_10001196
185 Ga0065707_10004484
186 Ga0070676_10019177
187 Ga0070683_100057265
188 Ga0070690_100034105
189 Ga0070670_100009920
190 Ga0070670_100124941
191 Ga0070677_10003450
192 Ga0070689_100050312
193 Ga0070668_100092781
194 Ga0070669_100087769
195 Ga0070675_100004309
196 Ga0070675_100058444
197 Ga0070675_100158268
198 Ga0070671_100002291
199 Ga0070674_100164658
200 Ga0070673_100071598
201 Ga0070673_100161047
202 Ga0070688_100016382
203 Ga0070688_100154838
204 Ga0070705_100001496
205 Ga0070705_100175110
206 Ga0070694_100000424
207 Ga0070694_100002043
208 Ga0070708_100107191
209 Ga0070678_100094149
210 Ga0068867_100009934
211 Ga0070707_100046010
212 Ga0070707_100087199
213 Ga0070698_100001728
214 Ga0070698_100040335
215 Ga0070699_100000346
216 Ga0070699_100001918
217 Ga0070672_100001114
218 Ga0070672_100208103
219 Ga0070686_100015790
220 Ga0070695_100001113
221 Ga0070695_100012837
222 Ga0070695_100030728
223 Ga0070696_100004969
224 Ga0070696_100027114
225 Ga0070704_100001449
226 Ga0070664_100019249
227 Ga0068857_100009481
228 Ga0068857_100023611
229 Ga0068856_100038368
230 Ga0068859_100001372
231 Ga0068859_100219148
232 Ga0068864_100027414
233 Ga0068861_100011110
234 Ga0068870_10003829
235 Ga0068858_100065411
236 Ga0068860_100007778
237 Ga0068862_100004806
238 Ga0081539_10000093
239 Ga0081539_10001946
240 Ga0068871_100114349
241 Ga0075428_100020892
242 Ga0075430_100021915
243 Ga0075431_100265892
244 Ga0075433_10005717
245 Ga0075433_10008272
246 Ga0075433_10141413
247 Ga0075434_100002621
248 Ga0075434_100006121
249 Ga0075434_100050784
250 Ga0075434_100051629
251 Ga0075434_100066501
252 Ga0075429_100055388
253 Ga0068865_100233918
254 Ga0097620_100001372
255 Ga0097620_100219157
256 Ga0075435_100007686
257 Ga0075435_100030153
258 Ga0075435_100031659
259 Ga0111539_10002555
260 Ga0111539_10007703
261 Ga0111539_10125122
262 Ga0114129_10006480
263 Ga0114129_10073574
264 Ga0114129_10096241
265 Ga0114129_10258709
266 Ga0105249_10008876
267 Ga0157375_10058511
268 Ga0157375_10077612
269 Ga0157380_10004184
270 Ga0157380_10115253
271 Ga0207682_10003068
272 Ga0207645_10055945
273 Ga0207643_10001578
274 Ga0207681_10004066
275 Ga0207650_10003821
276 Ga0207659_10001446
277 Ga0207659_10042828
278 Ga0207659_10189737
279 Ga0207700_10002261
280 Ga0207670_10010338
281 Ga0207670_10033714
282 Ga0207669_10003069
283 Ga0207691_10007158
284 Ga0207691_10145196
285 Ga0207661_10016042
286 Ga0207661_10105576
287 Ga0207651_10092875
288 Ga0207668_10078716
289 Ga0207703_10198893
290 Ga0207708_10184026
291 Ga0207708_10195506
292 Ga0207702_10012141
293 Ga0207648_10057448
294 Ga0207676_10015582
295 Ga0207676_10034216
296 Ga0207674_10019375
297 Ga0207675_100008016
298 Ga0207428_10000481
299 Ga0207428_10032668
300 Ga0268265_10001312
301 Ga0268264_10001604
302 Ga0307408_100016230
303 Ga0307405_10006445
304 Ga0307405_10048942
305 Ga0307413_10009725
306 Ga0307410_10001374
307 Ga0307410_10172953
308 Ga0307407_10006493
309 Ga0307412_10073726
310 Ga0307409_100003138
311 Ga0307409_100030607
312 Ga0307416_100002762
313 Ga0307416_100011391
314 Ga0307416_100086662
315 Ga0307414_10015053
316 Ga0307411_10010639
317 Ga0307411_10026142
318 Ga0307415_100023987
319 Ga0439435_0005369
320 Ga0451576_0040358
321 Ga0451576_0357885
322 Ga0495603_0013769
323 Ga0495629_0017451
324 Ga0495580_0084100
325 Ga0495584_0067184
326 Ga0495663_0007533
327 Ga0495642_0025221
328 Ga0495609_0049919
329 Ga0495645_0030626
330 Ga0495659_0001852
331 Ga0495659_0015761
332 Ga0495669_0009279
333 Ga0495636_0003559
334 Ga0495636_0064553
335 Ga0495676_0029983
336 Ga0496112_0325088
337 Ga0501041_0145375
338 nmdc:mga05p37_1033_c1
339 nmdc:mga05p37_184712_c1
340 nmdc:mga05p37_36225_c1
341 nmdc:mga09592_163962_c1
342 nmdc:mga09592_22345_c1
343 nmdc:mga0qj67_28643_c1
344 nmdc:mga08y16_23400_c1
345 nmdc:mga08y16_353_c1
346 nmdc:mga08y16_75635_c1
347 nmdc:mga08y16_98348_c1
348 nmdc:mga0n895_108563_c1
349 nmdc:mga0n895_1316_c1
350 nmdc:mga0n895_69113_c1
351 nmdc:mga0n895_9540_c1
352 nmdc:mga0rr50_130891_c1
353 nmdc:mga0rr50_3023_c1
354 nmdc:mga0a205_107867_c1
355 nmdc:mga0a205_1529_c1
356 nmdc:mga0a205_1881_c1
357 nmdc:mga0a205_203448_c1
358 Ga0501084_0200438
359 Ga0590071_000583
360 Ga0590074_000312

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

10

98

0.97

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

326

436

0.94

PF08245

Mur_ligase_M

Mur ligase middle domain

114

302

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dp2-assembly1.cif.gz_A crystal structure of udp-n-acetylmuramoylalanine--d-glutamate ligase (murd) from pseudomonas aeruginosa pao1 in complex with uma (uridine-5'-diphosphate-n-acetylmuramoyl-l-alanine) 0.8802 3 387
7ti7-assembly1.cif.gz_A crystal structure of udp-n-acetylmuramoylalanine-d-glutamate ligase from acinetobacter baumannii ab5075-uw in complex with adp 0.8515 3 387
3uag-assembly1.cif.gz_A udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase 0.8479 3 389
2uag-assembly1.cif.gz_A udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase 0.8455 3 389
4uag-assembly1.cif.gz_A udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase 0.8454 3 389
ID Description Score Start End Superfamily
3lk7A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9314 64 249 3.40.1190.10
4bucB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8992 258 388 3.90.190.20
af_P9WJL5_118_319_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8939 74 249 3.40.1190.10
1uagA03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8898 253 389 3.90.190.20
af_Q2FZ92_312_442_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8851 258 385 3.90.190.20
ID Description Score Start End GO Terms
AF-B6WAW6-F1-model_v4 Mur ligase family, glutamate ligase domain protein 0.9515 257 387 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
GO:0071555
AF-A0A2J0N3H6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9417 3 204 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
AF-A0A7Y2A6M6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.941 257 389 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A7V9SNV5-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9389 266 392 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A7W0LFX3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC 6.3.2.9) 0.9352 2 250 GO:0004326
GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301

Map