F274601

General Info

Members Datasets Scaffolds Average Seq Length
179 125 358 138

Family's Representative Sequence

Representative Sequence 3300050514|nmdc:mga08x19_274254_c1|nmdc:mga08x19_274254_c1_630_1139
Length 169
Sequence VKPFSPHSPALLVSLRGDFRKMSTRSSIRTRLLVPEPRHPRGLVDTSVVIDLERMRPADLPGEIAVSAITMAELAAGPHATSDPAERARRQDRLQRAEATFEPLPVDASVARAYGRVYAAVAAAGRKARGRRVVDLLIAATAVAAGLPLYTRNPDDFAGLSKILEIVRV

Samples

Sample ID Description Type Environment
1 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
38 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
50 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
57 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
58 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
61 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
68 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
69 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
70 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
84 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
85 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
102 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
103 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.35
Nodule 0
Rhizoplane 0
Rhizosphere 95.53
Stem 0
Stem Tuber 0
Unclassified 23.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08x19_274254_c1 3300050514 Unclassified 1168
2 Ga0070676_10510189 3300005328 Bacteria 855
3 Ga0070694_101129809 3300005444 Bacteria 654
4 Ga0070706_100529463 3300005467 Bacteria 1096
5 Ga0070707_100180801 3300005468 Bacteria 2056
6 Ga0070707_100606491 3300005468 Unclassified 1057
7 Ga0070698_100525702 3300005471 Bacteria 1121
8 Ga0070699_100101289 3300005518 Bacteria 2525
9 Ga0070699_100168189 3300005518 Bacteria 1942
10 Ga0070699_100478087 3300005518 Bacteria 1131
11 Ga0070697_101150638 3300005536 Unclassified 691
12 Ga0070695_100006938 3300005545 Bacteria 6709
13 Ga0070696_100067111 3300005546 Bacteria 2517
14 Ga0070696_100426324 3300005546 Unclassified 1042
15 Ga0070693_100085272 3300005547 Unclassified 1892
16 Ga0070704_100006578 3300005549 Bacteria 6856
17 Ga0068863_101310865 3300005841 Unclassified 731
18 Ga0068860_100050805 3300005843 Bacteria 3946
19 Ga0068862_102690385 3300005844 Bacteria 509
20 Ga0081539_10000857 3300005985 Bacteria 58242
21 Ga0081539_10066928 3300005985 Bacteria 1945
22 Ga0075365_10019836 3300006038 Bacteria 4158
23 Ga0075364_10000742 3300006051 Bacteria 17096
24 Ga0075367_10055793 3300006178 Bacteria 2346
25 Ga0075369_10065105 3300006186 Bacteria 1597
26 Ga0075431_100136513 3300006847 Unclassified 2529
27 Ga0075431_100522111 3300006847 Unclassified 1177
28 Ga0075431_101427467 3300006847 Unclassified 651
29 Ga0075436_100017741 3300006914 Bacteria 4872
30 Ga0097620_101363021 3300006931 Unclassified 782
31 Ga0075435_100016296 3300007076 Bacteria 5602
32 Ga0105247_10028734 3300009101 Bacteria 3364
33 Ga0114129_10018560 3300009147 Bacteria 9902
34 Ga0114129_10023779 3300009147 Bacteria 8685
35 Ga0114129_10182891 3300009147 Bacteria 2851
36 Ga0105243_12123312 3300009148 Unclassified 598
37 Ga0105242_10315770 3300009176 Bacteria 1431
38 Ga0157372_12595051 3300013307 Bacteria 582
39 Ga0163163_10165888 3300014325 Bacteria 2255
40 Ga0157379_10048625 3300014968 Bacteria 3786
41 Ga0207684_10150890 3300025910 Bacteria 2000
42 Ga0207684_10175350 3300025910 Bacteria 1848
43 Ga0207684_10931890 3300025910 Bacteria 729
44 Ga0207646_10064775 3300025922 Bacteria 3262
45 Ga0207646_10154925 3300025922 Bacteria 2067
46 Ga0207669_10031210 3300025937 Bacteria 2974
47 Ga0207661_10754542 3300025944 Bacteria 896
48 Ga0268264_11366875 3300028381 Unclassified 719
49 Ga0265318_10113041 3300028577 Unclassified 998
50 Ga0265336_10203621 3300028666 Bacteria 588
51 Ga0265338_10008152 3300028800 Bacteria 12785
52 Ga0265338_10805722 3300028800 Unclassified 643
53 Ga0265320_10037892 3300031240 Bacteria 2425
54 Ga0265327_10146571 3300031251 Bacteria 1099
55 Ga0307408_100542077 3300031548 Bacteria 1025
56 Ga0307408_100929791 3300031548 Unclassified 798
57 Ga0316575_10062917 3300031665 Bacteria 1484
58 Ga0316578_10121640 3300031728 Bacteria 1569
59 Ga0307405_10077832 3300031731 Bacteria 2156
60 Ga0307405_10315410 3300031731 Unclassified 1192
61 Ga0307405_10981618 3300031731 Unclassified 719
62 Ga0307413_10622286 3300031824 Bacteria 886
63 Ga0307410_10252568 3300031852 Bacteria 1371
64 Ga0307406_11130219 3300031901 Unclassified 677
65 Ga0307407_10025271 3300031903 Unclassified 3128
66 Ga0307412_10007540 3300031911 Bacteria 6179
67 Ga0307412_10483208 3300031911 Unclassified 1028
68 Ga0307412_11711817 3300031911 Unclassified 576
69 Ga0307409_100013845 3300031995 Bacteria 5215
70 Ga0307409_100193594 3300031995 Bacteria 1812
71 Ga0307416_100028262 3300032002 Bacteria 4167
72 Ga0307416_100383003 3300032002 Unclassified 1437
73 Ga0307416_100915671 3300032002 Unclassified 977
74 Ga0307414_10081809 3300032004 Unclassified 2366
75 Ga0307411_10617087 3300032005 Bacteria 934
76 Ga0307415_100034920 3300032126 Unclassified 3279
77 Ga0307415_100815019 3300032126 Bacteria 853
78 Ga0373953_0005796 3300035117 Bacteria 4036
79 Ga0373955_0252140 3300035172 Bacteria 1058
80 Ga0373961_0000402 3300035241 Bacteria 18147
81 Ga0316574_0004333 3300035398 Bacteria 7415
82 Ga0373924_0109865 3300035410 Bacteria 1191
83 Ga0373933_0043238 3300035724 Unclassified 2665
84 Ga0373937_0085866 3300036401 Plasmid 2912
85 Ga0395899_0051931 3300037312 Bacteria 3041
86 Ga0395900_0159384 3300037418 Bacteria 2302
87 Ga0395898_0101855 3300037466 Bacteria 2757
88 Ga0395898_0594491 3300037466 Bacteria 1049
89 Ga0395901_0115131 3300038443 Bacteria 2824
90 Ga0395901_0376844 3300038443 Bacteria 1461
91 Ga0395901_0406056 3300038443 Bacteria 1399
92 Ga0395901_0463193 3300038443 Bacteria 1295
93 Ga0395901_0864847 3300038443 Bacteria 888
94 Ga0400483_063209 3300039062 Bacteria 4551
95 Ga0400483_278233 3300039062 Bacteria 5460
96 Ga0439453_0049435 3300041408 Bacteria 846
97 Ga0439454_011981 3300042011 Unclassified 1168
98 Ga0450920_064330 3300042122 Unclassified 743
99 Ga0466966_0694058 3300044684 Unclassified 613
100 Ga0466970_0010466 3300044765 Bacteria 4709
101 Ga0451576_1134341 3300045051 Bacteria 818
102 Ga0451576_1372499 3300045051 Unclassified 736
103 Ga0495592_0009570 3300046454 Bacteria 7292
104 Ga0495651_0120792 3300046462 Bacteria 1925
105 Ga0495608_0002599 3300046511 Bacteria 12977
106 Ga0495618_0192923 3300046514 Bacteria 1291
107 Ga0495640_0039172 3300046533 Bacteria 3328
108 Ga0495634_0376362 3300046642 Bacteria 847
109 Ga0495635_0005804 3300046663 Bacteria 8602
110 Ga0495657_0003222 3300046675 Bacteria 13423
111 Ga0495599_0455394 3300046678 Bacteria 757
112 Ga0495646_0099192 3300046680 Bacteria 1672
113 Ga0495647_0148813 3300046681 Bacteria 1003
114 Ga0495600_0001058 3300046809 Bacteria 14909
115 Ga0495604_0002791 3300047317 Bacteria 14012
116 Ga0495674_0004240 3300047319 Bacteria 13818
117 Ga0495602_0311042 3300048088 Bacteria 1149
118 Ga0501031_0261928 3300049568 Bacteria 1123
119 Ga0501032_0014217 3300049569 Bacteria 5638
120 Ga0501032_0157696 3300049569 Bacteria 1490
121 Ga0501034_0145831 3300049571 Bacteria 2344
122 Ga0501034_1300470 3300049571 Bacteria 604
123 Ga0501036_0094831 3300049572 Bacteria 2522
124 Ga0501036_0415593 3300049572 Bacteria 1122
125 Ga0501038_0043314 3300049574 Bacteria 3914
126 Ga0501039_0015521 3300049575 Bacteria 5830
127 Ga0501039_0215038 3300049575 Bacteria 1511
128 Ga0501039_0426189 3300049575 Bacteria 1042
129 Ga0501039_0909405 3300049575 Unclassified 685
130 Ga0501041_0298448 3300049577 Unclassified 1015
131 Ga0501042_0468534 3300049578 Unclassified 914
132 Ga0501042_1099498 3300049578 Unclassified 580
133 Ga0501043_0121167 3300049579 Bacteria 2051
134 Ga0501046_0033006 3300049580 Bacteria 4187
135 Ga0501046_0167095 3300049580 Bacteria 1653
136 Ga0501047_0009993 3300049581 Bacteria 8969
137 Ga0501048_0355515 3300049582 Bacteria 1045
138 Ga0501067_0036561 3300049583 Bacteria 2726
139 Ga0501067_0487276 3300049583 Unclassified 689
140 Ga0501068_0157695 3300049584 Bacteria 1429
141 Ga0501069_0120918 3300049585 Bacteria 1495
142 Ga0501071_0074073 3300049587 Bacteria 2485
143 Ga0501072_0066422 3300049588 Bacteria 2845
144 Ga0501073_0007985 3300049589 Bacteria 7855
145 Ga0501073_0547769 3300049589 Bacteria 799
146 Ga0501076_0559785 3300049592 Bacteria 943
147 Ga0501076_1464520 3300049592 Unclassified 561
148 Ga0501077_0190618 3300049593 Bacteria 1302
149 Ga0501079_0847018 3300049741 Bacteria 720
150 Ga0501080_0010195 3300049742 Bacteria 8593
151 Ga0501083_0076699 3300049744 Bacteria 2218
152 Ga0501083_0267940 3300049744 Bacteria 1111
153 Ga0501035_0108920 3300049822 Bacteria 2428
154 Ga0501044_0088180 3300049823 Bacteria 3132
155 Ga0501045_0207948 3300049824 Bacteria 1458
156 Ga0501045_0335719 3300049824 Unclassified 1125
157 Ga0501045_0550618 3300049824 Bacteria 856
158 Ga0501045_1361587 3300049824 Unclassified 516
159 nmdc:mga03683_23221_c2 3300050489 Bacteria 1661
160 nmdc:mga00v17_22562_c1 3300050491 Bacteria 3633
161 nmdc:mga05p37_158465_c1 3300050507 Bacteria 2280
162 nmdc:mga05p37_361674_c1 3300050507 Bacteria 1706
163 nmdc:mga05p37_70428_c1 3300050507 Bacteria 4301
164 nmdc:mga05p37_94844_c1 3300050507 Bacteria 3676
165 nmdc:mga06r32_114092_c1 3300050510 Unclassified 2660
166 nmdc:mga06r32_698321_c1 3300050510 Bacteria 980
167 nmdc:mga06r32_734341_c1 3300050510 Bacteria 951
168 nmdc:mga0n895_125646_c1 3300050512 Unclassified 2589
169 nmdc:mga0rr50_129204_c1 3300050513 Bacteria 2021
170 nmdc:mga0a205_1029931_c1 3300050515 Unclassified 670
171 nmdc:mga0a205_323280_c1 3300050515 Bacteria 1413
172 Ga0495619_0160556 3300053085 Bacteria 1552
173 Ga0501084_0848820 3300054114 Bacteria 769
174 Ga0501084_1091641 3300054114 Unclassified 670
175 Ga0501082_0004083 3300060353 Bacteria 12738
176 Ga0501082_0035368 3300060353 Bacteria 4305
177 Ga0501082_1021471 3300060353 Bacteria 723
178 Ga0530510_0533709 3300061734 Bacteria 890
179 Ga0530510_0759804 3300061734 Bacteria 739
180 nmdc:mga08x19_274254_c1
181 Ga0070676_10510189
182 Ga0070694_101129809
183 Ga0070706_100529463
184 Ga0070707_100180801
185 Ga0070707_100606491
186 Ga0070698_100525702
187 Ga0070699_100101289
188 Ga0070699_100168189
189 Ga0070699_100478087
190 Ga0070697_101150638
191 Ga0070695_100006938
192 Ga0070696_100067111
193 Ga0070696_100426324
194 Ga0070693_100085272
195 Ga0070704_100006578
196 Ga0068863_101310865
197 Ga0068860_100050805
198 Ga0068862_102690385
199 Ga0081539_10000857
200 Ga0081539_10066928
201 Ga0075365_10019836
202 Ga0075364_10000742
203 Ga0075367_10055793
204 Ga0075369_10065105
205 Ga0075431_100136513
206 Ga0075431_100522111
207 Ga0075431_101427467
208 Ga0075436_100017741
209 Ga0097620_101363021
210 Ga0075435_100016296
211 Ga0105247_10028734
212 Ga0114129_10018560
213 Ga0114129_10023779
214 Ga0114129_10182891
215 Ga0105243_12123312
216 Ga0105242_10315770
217 Ga0157372_12595051
218 Ga0163163_10165888
219 Ga0157379_10048625
220 Ga0207684_10150890
221 Ga0207684_10175350
222 Ga0207684_10931890
223 Ga0207646_10064775
224 Ga0207646_10154925
225 Ga0207669_10031210
226 Ga0207661_10754542
227 Ga0268264_11366875
228 Ga0265318_10113041
229 Ga0265336_10203621
230 Ga0265338_10008152
231 Ga0265338_10805722
232 Ga0265320_10037892
233 Ga0265327_10146571
234 Ga0307408_100542077
235 Ga0307408_100929791
236 Ga0316575_10062917
237 Ga0316578_10121640
238 Ga0307405_10077832
239 Ga0307405_10315410
240 Ga0307405_10981618
241 Ga0307413_10622286
242 Ga0307410_10252568
243 Ga0307406_11130219
244 Ga0307407_10025271
245 Ga0307412_10007540
246 Ga0307412_10483208
247 Ga0307412_11711817
248 Ga0307409_100013845
249 Ga0307409_100193594
250 Ga0307416_100028262
251 Ga0307416_100383003
252 Ga0307416_100915671
253 Ga0307414_10081809
254 Ga0307411_10617087
255 Ga0307415_100034920
256 Ga0307415_100815019
257 Ga0373953_0005796
258 Ga0373955_0252140
259 Ga0373961_0000402
260 Ga0316574_0004333
261 Ga0373924_0109865
262 Ga0373933_0043238
263 Ga0373937_0085866
264 Ga0395899_0051931
265 Ga0395900_0159384
266 Ga0395898_0101855
267 Ga0395898_0594491
268 Ga0395901_0115131
269 Ga0395901_0376844
270 Ga0395901_0406056
271 Ga0395901_0463193
272 Ga0395901_0864847
273 Ga0400483_063209
274 Ga0400483_278233
275 Ga0439453_0049435
276 Ga0439454_011981
277 Ga0450920_064330
278 Ga0466966_0694058
279 Ga0466970_0010466
280 Ga0451576_1134341
281 Ga0451576_1372499
282 Ga0495592_0009570
283 Ga0495651_0120792
284 Ga0495608_0002599
285 Ga0495618_0192923
286 Ga0495640_0039172
287 Ga0495634_0376362
288 Ga0495635_0005804
289 Ga0495657_0003222
290 Ga0495599_0455394
291 Ga0495646_0099192
292 Ga0495647_0148813
293 Ga0495600_0001058
294 Ga0495604_0002791
295 Ga0495674_0004240
296 Ga0495602_0311042
297 Ga0501031_0261928
298 Ga0501032_0014217
299 Ga0501032_0157696
300 Ga0501034_0145831
301 Ga0501034_1300470
302 Ga0501036_0094831
303 Ga0501036_0415593
304 Ga0501038_0043314
305 Ga0501039_0015521
306 Ga0501039_0215038
307 Ga0501039_0426189
308 Ga0501039_0909405
309 Ga0501041_0298448
310 Ga0501042_0468534
311 Ga0501042_1099498
312 Ga0501043_0121167
313 Ga0501046_0033006
314 Ga0501046_0167095
315 Ga0501047_0009993
316 Ga0501048_0355515
317 Ga0501067_0036561
318 Ga0501067_0487276
319 Ga0501068_0157695
320 Ga0501069_0120918
321 Ga0501071_0074073
322 Ga0501072_0066422
323 Ga0501073_0007985
324 Ga0501073_0547769
325 Ga0501076_0559785
326 Ga0501076_1464520
327 Ga0501077_0190618
328 Ga0501079_0847018
329 Ga0501080_0010195
330 Ga0501083_0076699
331 Ga0501083_0267940
332 Ga0501035_0108920
333 Ga0501044_0088180
334 Ga0501045_0207948
335 Ga0501045_0335719
336 Ga0501045_0550618
337 Ga0501045_1361587
338 nmdc:mga03683_23221_c2
339 nmdc:mga00v17_22562_c1
340 nmdc:mga05p37_158465_c1
341 nmdc:mga05p37_361674_c1
342 nmdc:mga05p37_70428_c1
343 nmdc:mga05p37_94844_c1
344 nmdc:mga06r32_114092_c1
345 nmdc:mga06r32_698321_c1
346 nmdc:mga06r32_734341_c1
347 nmdc:mga0n895_125646_c1
348 nmdc:mga0rr50_129204_c1
349 nmdc:mga0a205_1029931_c1
350 nmdc:mga0a205_323280_c1
351 Ga0495619_0160556
352 Ga0501084_0848820
353 Ga0501084_1091641
354 Ga0501082_0004083
355 Ga0501082_0035368
356 Ga0501082_1021471
357 Ga0530510_0533709
358 Ga0530510_0759804

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

42

163

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dbo-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9068 17 146
3dbo-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8932 17 146
5ecw-assembly1.cif.gz_B structure of the shigella flexneri vapc mutant d7a 0.857 16 145
5ecw-assembly1.cif.gz_B structure of the shigella flexneri vapc mutant d7a 0.8378 16 145
5k8j-assembly1.cif.gz_B structure of caulobacter crescentus vapbc1 (apo form) 0.7965 20 146
ID Description Score Start End Superfamily
3dboB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9068 17 146 3.40.50.1010
3dboB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8932 17 146 3.40.50.1010
af_O07783_4_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8672 18 146 3.40.50.1010
5ecwB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.857 16 145 3.40.50.1010
af_O07783_4_130_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8546 18 146 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A838E2A6-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9909 18 146 GO:0000287
GO:0004540
GO:0090729
AF-A0A2U1EQ47-F1-model_v4 deleted 0.9884 13 146
AF-A0A7W9J711-F1-model_v4 Putative nucleic acid-binding protein 0.9839 19 146 GO:0004518
GO:0046872
AF-W6JT64-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9838 16 145 GO:0000287
GO:0004540
GO:0090729
AF-A0A7W1Q3J2-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9838 21 146 GO:0004518
GO:0046872

Map