F274315

General Info

Members Datasets Scaffolds Average Seq Length
179 140 358 496

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0033302|Ga0495603_0033302_1266_2972
Length 546
Sequence MLVVGGREILPIDGQLISPLAVSRSPHWRPRDFPTLVVSLPGGSALVVLAGLDESSRREGSAVKSSEEIMDILEAYDLAGGLRAAARLAGCDHKTVAHYVALRDGGASPDQRLRRPMAIDPFLDKIEEWVDRSRGQVRADVVHEKLVAMGFVGSDRSTRRAVALAKKAWRSGNRRVFRPWVPEPGLWLQFDWGVGPRIAGRRTLLFCGWLAWSRFRVVLPVWDRTLPSLLACLDATLRAIGGAPTYALTDNEKTVTVEHIARVPVRHPDIVAAGRHYGMTIRTCVPADPQSKGGTEASVRIAKADLVPTEANLVEEYASFADLEAACAMFCHQVNARPHRATGRAPVEMLAEEQAQLHVLPAQPVTVAFGQTRRVCWDATISVAGVRYSVPHQHVDERVWARWAGEELVVTVVDADGPREIARHQRGQRGRPQLREEHYPADHPSRKAVPGERIPRAGNPAEAAFLAIGAEAVALAKLHGAAAVDQALGTAALAGRFGETDLTAILHHQQAGPTSPPVRAGEQHSLQPGTAGWAQFGATIVAAGER

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
64 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
70 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
71 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
76 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
99 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
100 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
132 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
137 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
138 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
139 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
140 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.77
Metatranscriptomes 0
Isolates 2.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 1.12
Rhizoplane 2.79
Rhizosphere 86.03
Stem 0
Stem Tuber 0
Unclassified 4.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0033302 3300046455 Bacteria 3101
2 JGI25404J52841_10011524 3300003659 Bacteria 1908
3 Ga0070658_10109254 3300005327 Bacteria 2290
4 Ga0070660_100075245 3300005339 Bacteria 2644
5 Ga0070714_100128375 3300005435 Unclassified 2263
6 Ga0070714_100179097 3300005435 Bacteria 1928
7 Ga0070710_10035982 3300005437 Bacteria 2704
8 Ga0070711_100016958 3300005439 Bacteria 4631
9 Ga0070708_100104477 3300005445 Bacteria 2598
10 Ga0070708_100223301 3300005445 Bacteria 1767
11 Ga0070681_10048134 3300005458 Bacteria 4261
12 Ga0070706_100107720 3300005467 Bacteria 2592
13 Ga0070707_100049619 3300005468 Bacteria 4023
14 Ga0070707_100064381 3300005468 Bacteria 3521
15 Ga0070707_100072442 3300005468 Bacteria 3320
16 Ga0070707_100092860 3300005468 Bacteria 2922
17 Ga0070707_100121998 3300005468 Unclassified 2530
18 Ga0070698_100057992 3300005471 Plasmid 3916
19 Ga0070698_100103367 3300005471 Bacteria 2819
20 Ga0070679_100099956 3300005530 Bacteria 2888
21 Ga0070684_100057710 3300005535 Bacteria 3390
22 Ga0068855_100118860 3300005563 Bacteria 3026
23 Ga0068857_100166500 3300005577 Bacteria 2002
24 Ga0068854_100062179 3300005578 Bacteria 2706
25 Ga0068854_100100290 3300005578 Bacteria 2170
26 Ga0068856_100103617 3300005614 Bacteria 2839
27 Ga0068852_100080242 3300005616 Bacteria 2892
28 Ga0068863_100089113 3300005841 Bacteria 2925
29 Ga0068858_100074109 3300005842 Bacteria 3160
30 Ga0081455_10011855 3300005937 Bacteria 8727
31 Ga0081455_10024179 3300005937 Bacteria 5634
32 Ga0081538_10027983 3300005981 Bacteria 3890
33 Ga0081540_1020214 3300005983 Bacteria 4014
34 Ga0081540_1043867 3300005983 Bacteria 2288
35 Ga0081539_10039072 3300005985 Bacteria 2805
36 Ga0070712_100104607 3300006175 Unclassified 2101
37 Ga0075428_100080912 3300006844 Bacteria 3545
38 Ga0075430_100109476 3300006846 Bacteria 2304
39 Ga0075431_100115225 3300006847 Bacteria 2774
40 Ga0075431_100116885 3300006847 Bacteria 2752
41 Ga0075431_100166642 3300006847 Bacteria 2265
42 Ga0075431_100190776 3300006847 Bacteria 2100
43 Ga0068865_100097532 3300006881 Bacteria 2146
44 Ga0105251_10025562 3300009011 Bacteria 3018
45 Ga0111539_10234860 3300009094 Bacteria 2135
46 Ga0105243_10070679 3300009148 Bacteria 2819
47 Ga0105238_10141813 3300009551 Bacteria 2379
48 Ga0163162_10213702 3300013306 Bacteria 2059
49 Ga0157372_10355441 3300013307 Bacteria 1707
50 Ga0163163_10129494 3300014325 Bacteria 2563
51 Ga0157379_10016763 3300014968 Bacteria 6448
52 Ga0207713_1012346 3300025735 Bacteria 4576
53 Ga0207692_10030446 3300025898 Bacteria 2574
54 Ga0207710_10017859 3300025900 Bacteria 3012
55 Ga0207699_10042177 3300025906 Bacteria 2641
56 Ga0207707_10090551 3300025912 Bacteria 2673
57 Ga0207695_10216693 3300025913 Bacteria 1823
58 Ga0207693_10058901 3300025915 Bacteria 3009
59 Ga0207657_10060422 3300025919 Bacteria 3253
60 Ga0207652_10067485 3300025921 Bacteria 3102
61 Ga0207646_10053303 3300025922 Bacteria 3618
62 Ga0207646_10066287 3300025922 Bacteria 3223
63 Ga0207646_10093227 3300025922 Bacteria 2696
64 Ga0207646_10146954 3300025922 Unclassified 2124
65 Ga0207664_10072313 3300025929 Bacteria 2780
66 Ga0207664_10079305 3300025929 Unclassified 2665
67 Ga0207664_10151913 3300025929 Bacteria 1968
68 Ga0207690_10050818 3300025932 Bacteria 2769
69 Ga0207706_10037207 3300025933 Bacteria 4322
70 Ga0207704_10088210 3300025938 Bacteria 2029
71 Ga0207667_10098024 3300025949 Bacteria 3025
72 Ga0207640_10113235 3300025981 Bacteria 1928
73 Ga0207703_10060582 3300026035 Bacteria 3095
74 Ga0207678_10070142 3300026067 Bacteria 3005
75 Ga0207702_10037204 3300026078 Bacteria 4073
76 Ga0207641_10074260 3300026088 Bacteria 2932
77 Ga0207674_10105326 3300026116 Bacteria 2799
78 Ga0207698_10071193 3300026142 Bacteria 2758
79 Ga0307517_10019167 3300028786 Bacteria 8798
80 Ga0307511_10064526 3300030521 Bacteria 2752
81 Ga0307514_10003854 3300031649 Bacteria 14096
82 Ga0316575_10030683 3300031665 Bacteria 2102
83 Ga0316578_10047840 3300031728 Bacteria 2496
84 Ga0373943_0022479 3300035170 Unclassified 2923
85 Ga0316574_0047073 3300035398 Bacteria 2676
86 Ga0373927_0024154 3300035695 Unclassified 3977
87 Ga0373947_0018107 3300035725 Plasmid 4053
88 Ga0316584_0075400 3300036712 Bacteria 2528
89 Ga0373925_0052520 3300037068 Unclassified 3045
90 Ga0373925_0091524 3300037068 Bacteria 2326
91 Ga0395898_0001662 3300037466 Bacteria 29830
92 Ga0436364_0101734 3300037853 Bacteria 1912
93 Ga0395901_0002446 3300038443 Bacteria 18830
94 Ga0400486_29471 3300038742 Bacteria 6239
95 Ga0400483_125435 3300039062 Bacteria 2678
96 Ga0400483_269263 3300039062 Bacteria 3057
97 Ga0436365_0609706 3300039437 Bacteria 3059
98 Ga0436365_1376012 3300039437 Bacteria 2532
99 Ga0436365_1704553 3300039437 Bacteria 2628
100 Ga0466966_0014959 3300044684 Bacteria 5135
101 Ga0466963_0051760 3300044694 Bacteria 2723
102 Ga0466959_0054209 3300045049 Bacteria 2930
103 Ga0466958_0039517 3300045836 Bacteria 2835
104 Ga0466967_0096625 3300045976 Bacteria 2695
105 Ga0466967_0106271 3300045976 Bacteria 2573
106 Ga0466967_0110594 3300045976 Bacteria 2524
107 Ga0466967_0184762 3300045976 Bacteria 1968
108 Ga0466967_0231259 3300045976 Bacteria 1760
109 Ga0495653_0068251 3300046463 Bacteria 2667
110 Ga0495664_0000231 3300046477 Bacteria 26802
111 Ga0495666_0000460 3300046526 Bacteria 18079
112 Ga0495640_0027417 3300046533 Bacteria 4109
113 Ga0495645_0005530 3300046543 Bacteria 8688
114 Ga0495634_0005126 3300046642 Bacteria 10114
115 Ga0495599_0015452 3300046678 Bacteria 4737
116 Ga0495613_0072935 3300046689 Bacteria 2502
117 Ga0495600_0050458 3300046809 Bacteria 2715
118 Ga0495604_0000180 3300047317 Bacteria 56391
119 Ga0495604_0059859 3300047317 Bacteria 2918
120 Ga0495636_0081313 3300047318 Bacteria 1396
121 Ga0495674_0014277 3300047319 Bacteria 7437
122 Ga0496102_0000746 3300048905 Bacteria 31860
123 Ga0496103_0004957 3300048906 Bacteria 8031
124 Ga0496112_0083377 3300048915 Bacteria 3161
125 Ga0496112_0118681 3300048915 Bacteria 2615
126 Ga0496113_0048504 3300048916 Bacteria 3160
127 Ga0496119_0012134 3300048922 Bacteria 7036
128 Ga0496119_0082862 3300048922 Bacteria 1843
129 Ga0496120_0006615 3300048923 Bacteria 8838
130 Ga0496121_0145578 3300048924 Bacteria 1751
131 Ga0496126_0104320 3300048929 Bacteria 2477
132 Ga0501031_0110236 3300049568 Bacteria 1797
133 Ga0501032_0037824 3300049569 Bacteria 3289
134 Ga0501033_0024547 3300049570 Bacteria 4547
135 Ga0501034_0078122 3300049571 Bacteria 3315
136 Ga0501034_0132899 3300049571 Bacteria 2471
137 Ga0501036_0118904 3300049572 Bacteria 2231
138 Ga0501037_0032957 3300049573 Bacteria 3827
139 Ga0501037_0035891 3300049573 Bacteria 3653
140 Ga0501038_0032018 3300049574 Bacteria 4643
141 Ga0501039_0006043 3300049575 Bacteria 9190
142 Ga0501042_0007434 3300049578 Bacteria 7176
143 Ga0501042_0060889 3300049578 Bacteria 2696
144 Ga0501043_0023690 3300049579 Bacteria 4815
145 Ga0501043_0078346 3300049579 Bacteria 2596
146 Ga0501046_0065221 3300049580 Bacteria 2841
147 Ga0501047_0026227 3300049581 Bacteria 5606
148 Ga0501047_0115152 3300049581 Bacteria 2570
149 Ga0501047_0115935 3300049581 Bacteria 2560
150 Ga0501048_0076961 3300049582 Bacteria 2354
151 Ga0501067_0054795 3300049583 Bacteria 2209
152 Ga0501068_0056728 3300049584 Bacteria 2374
153 Ga0501069_0022121 3300049585 Bacteria 3455
154 Ga0501070_0045868 3300049586 Bacteria 3634
155 Ga0501073_0002075 3300049589 Bacteria 14992
156 Ga0501074_0063114 3300049590 Bacteria 2668
157 Ga0501080_0024701 3300049742 Bacteria 5572
158 Ga0501083_0099601 3300049744 Bacteria 1917
159 Ga0501035_0070730 3300049822 Bacteria 3090
160 Ga0501035_0116541 3300049822 Bacteria 2337
161 Ga0501044_0048067 3300049823 Bacteria 4409
162 Ga0501044_0130288 3300049823 Bacteria 2509
163 Ga0501045_0029380 3300049824 Bacteria 3973
164 nmdc:mga06z11_29118_c1 3300050494 Bacteria 2656
165 nmdc:mga09592_26939_c1 3300050508 Bacteria 4766
166 nmdc:mga0qj67_38521_c1 3300050509 Bacteria 3751
167 nmdc:mga06r32_14898_c1 3300050510 Bacteria 7056
168 nmdc:mga06r32_31893_c1 3300050510 Bacteria 4953
169 nmdc:mga06r32_74528_c1 3300050510 Bacteria 3291
170 Ga0495601_0047160 3300053077 Bacteria 2712
171 Ga0495612_0021150 3300053078 Bacteria 2610
172 Ga0495619_0037516 3300053085 Bacteria 3158
173 Ga0500660_024422 3300053100 Bacteria 3199
174 Ga0501084_0044252 3300054114 Bacteria 3727
175 Ga0530510_0055711 3300061734 Bacteria 2856
176 2676200282 2675902999 Bacteria 9438463
177 2774844860 2773857921 Bacteria 9435764
178 2912763877 2912757875 Bacteria 7940295
179 3003007980 3002998708 Bacteria 11715108
180 Ga0495603_0033302
181 JGI25404J52841_10011524
182 Ga0070658_10109254
183 Ga0070660_100075245
184 Ga0070714_100128375
185 Ga0070714_100179097
186 Ga0070710_10035982
187 Ga0070711_100016958
188 Ga0070708_100104477
189 Ga0070708_100223301
190 Ga0070681_10048134
191 Ga0070706_100107720
192 Ga0070707_100049619
193 Ga0070707_100064381
194 Ga0070707_100072442
195 Ga0070707_100092860
196 Ga0070707_100121998
197 Ga0070698_100057992
198 Ga0070698_100103367
199 Ga0070679_100099956
200 Ga0070684_100057710
201 Ga0068855_100118860
202 Ga0068857_100166500
203 Ga0068854_100062179
204 Ga0068854_100100290
205 Ga0068856_100103617
206 Ga0068852_100080242
207 Ga0068863_100089113
208 Ga0068858_100074109
209 Ga0081455_10011855
210 Ga0081455_10024179
211 Ga0081538_10027983
212 Ga0081540_1020214
213 Ga0081540_1043867
214 Ga0081539_10039072
215 Ga0070712_100104607
216 Ga0075428_100080912
217 Ga0075430_100109476
218 Ga0075431_100115225
219 Ga0075431_100116885
220 Ga0075431_100166642
221 Ga0075431_100190776
222 Ga0068865_100097532
223 Ga0105251_10025562
224 Ga0111539_10234860
225 Ga0105243_10070679
226 Ga0105238_10141813
227 Ga0163162_10213702
228 Ga0157372_10355441
229 Ga0163163_10129494
230 Ga0157379_10016763
231 Ga0207713_1012346
232 Ga0207692_10030446
233 Ga0207710_10017859
234 Ga0207699_10042177
235 Ga0207707_10090551
236 Ga0207695_10216693
237 Ga0207693_10058901
238 Ga0207657_10060422
239 Ga0207652_10067485
240 Ga0207646_10053303
241 Ga0207646_10066287
242 Ga0207646_10093227
243 Ga0207646_10146954
244 Ga0207664_10072313
245 Ga0207664_10079305
246 Ga0207664_10151913
247 Ga0207690_10050818
248 Ga0207706_10037207
249 Ga0207704_10088210
250 Ga0207667_10098024
251 Ga0207640_10113235
252 Ga0207703_10060582
253 Ga0207678_10070142
254 Ga0207702_10037204
255 Ga0207641_10074260
256 Ga0207674_10105326
257 Ga0207698_10071193
258 Ga0307517_10019167
259 Ga0307511_10064526
260 Ga0307514_10003854
261 Ga0316575_10030683
262 Ga0316578_10047840
263 Ga0373943_0022479
264 Ga0316574_0047073
265 Ga0373927_0024154
266 Ga0373947_0018107
267 Ga0316584_0075400
268 Ga0373925_0052520
269 Ga0373925_0091524
270 Ga0395898_0001662
271 Ga0436364_0101734
272 Ga0395901_0002446
273 Ga0400486_29471
274 Ga0400483_125435
275 Ga0400483_269263
276 Ga0436365_0609706
277 Ga0436365_1376012
278 Ga0436365_1704553
279 Ga0466966_0014959
280 Ga0466963_0051760
281 Ga0466959_0054209
282 Ga0466958_0039517
283 Ga0466967_0096625
284 Ga0466967_0106271
285 Ga0466967_0110594
286 Ga0466967_0184762
287 Ga0466967_0231259
288 Ga0495653_0068251
289 Ga0495664_0000231
290 Ga0495666_0000460
291 Ga0495640_0027417
292 Ga0495645_0005530
293 Ga0495634_0005126
294 Ga0495599_0015452
295 Ga0495613_0072935
296 Ga0495600_0050458
297 Ga0495604_0000180
298 Ga0495604_0059859
299 Ga0495636_0081313
300 Ga0495674_0014277
301 Ga0496102_0000746
302 Ga0496103_0004957
303 Ga0496112_0083377
304 Ga0496112_0118681
305 Ga0496113_0048504
306 Ga0496119_0012134
307 Ga0496119_0082862
308 Ga0496120_0006615
309 Ga0496121_0145578
310 Ga0496126_0104320
311 Ga0501031_0110236
312 Ga0501032_0037824
313 Ga0501033_0024547
314 Ga0501034_0078122
315 Ga0501034_0132899
316 Ga0501036_0118904
317 Ga0501037_0032957
318 Ga0501037_0035891
319 Ga0501038_0032018
320 Ga0501039_0006043
321 Ga0501042_0007434
322 Ga0501042_0060889
323 Ga0501043_0023690
324 Ga0501043_0078346
325 Ga0501046_0065221
326 Ga0501047_0026227
327 Ga0501047_0115152
328 Ga0501047_0115935
329 Ga0501048_0076961
330 Ga0501067_0054795
331 Ga0501068_0056728
332 Ga0501069_0022121
333 Ga0501070_0045868
334 Ga0501073_0002075
335 Ga0501074_0063114
336 Ga0501080_0024701
337 Ga0501083_0099601
338 Ga0501035_0070730
339 Ga0501035_0116541
340 Ga0501044_0048067
341 Ga0501044_0130288
342 Ga0501045_0029380
343 nmdc:mga06z11_29118_c1
344 nmdc:mga09592_26939_c1
345 nmdc:mga0qj67_38521_c1
346 nmdc:mga06r32_14898_c1
347 nmdc:mga06r32_31893_c1
348 nmdc:mga06r32_74528_c1
349 Ga0495601_0047160
350 Ga0495612_0021150
351 Ga0495619_0037516
352 Ga0500660_024422
353 Ga0501084_0044252
354 Ga0530510_0055711
355 2676200282
356 2774844860
357 2912763877
358 3003007980

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22483

Mu-transpos_C_2

Mu transposase, C-terminal domain

360

435

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cz2-assembly2.cif.gz_D crystal structure of a two-domain fragment of mmtv integrase 0.8034 115 282
3kkr-assembly1.cif.gz_A crystal structure of catalytic core domain of biv integrase in crystal form i 0.8009 117 287
6qbv-assembly1.cif.gz_B structure of the htlv-2 integrase catalytic core domain in complex with magnesium (dimeric form) 0.7977 114 281
6qbt-assembly1.cif.gz_A structure of the htlv-2 integrase catalytic core domain in complex with magnesium (trimeric form) 0.7969 114 280
5cz2-assembly1.cif.gz_B crystal structure of a two-domain fragment of mmtv integrase 0.7964 115 282
ID Description Score Start End Superfamily
af_Q50700_43_228_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8348 115 292 3.30.420.10
af_I6X5T4_111_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.816 115 292 3.30.420.10
af_P37007_135_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8065 114 272 3.30.420.10
af_Q50700_43_228_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7977 115 292 3.30.420.10
af_I6X5T4_111_295_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7841 115 292 3.30.420.10
ID Description Score Start End GO Terms
AF-R4Z295-F1-model_v4 Putative Integrase/transposase 0.7908 130 497 GO:0003676
GO:0015074
AF-R4Z295-F1-model_v4 Putative Integrase/transposase 0.7659 130 497 GO:0003676
GO:0015074
AF-X1USR4-F1-model_v4 Integrase catalytic domain-containing protein 0.7607 95 315 GO:0003676
GO:0015074
AF-A0A7S7EWT7-F1-model_v4 IS21 family transposase 0.7569 121 322 GO:0003676
GO:0015074
AF-A0A285PHX3-F1-model_v4 Integrase core domain-containing protein 0.7399 115 293 GO:0003676
GO:0015074

Map