F273857

General Info

Members Datasets Scaffolds Average Seq Length
179 121 352 498

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10089382|Ga0163163_100893822
Length 538
Sequence MIVGRWAVNGIGGFRRYSVKLVLTAKPEPSSMRCLPTRLFATFICLFLMIGLAAAQSERVLRLGLREDPDLLDPTLGSSYVGRVVYAGMCDKLFDIDENLRIVPQLATGYDYPDNTHLRIRLRPGVTFHDGAPFDAEAVKMKVMRDLTAKGSLRAGDINSVASVEIVDPLTVVLVLKQPNAALLAQLTDRAGIMISPKAVEANGDKFGLHPVCAGPFAFEQRIAQDRIVLKRFPAYWNAANIHIDRLIYQPIPNSTVRLANLQAGSVDLVEYIVPSDVPAAQRDPRLQVVMGDAMGYQGITINIAHGAASDTILGRNVLVRQALELSIDRHAVVQVVYNGMYTPVAQANASASPFHVPSVQPPPRDIAKAKALLQQAGVPLPVPVVLTIPNNPDLIQVGEVIQAMAREAGFDVRIKAMEFASSLQAARNGEFEAYLIFFSGRADADGNMYPFLNSKGEANWGRYSNATVDRLLDEARIPTDPAQRRDIYGQLWKQAQIDLPIIYLWTFKNIVGMKRGITGFTLVPDGLIRFTNMKLAP

Samples

Sample ID Description Type Environment
1 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
79 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
96 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
101 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
116 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
117 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
118 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.55
Nodule 0
Rhizoplane 2.23
Rhizosphere 73.18
Stem 0
Stem Tuber 0
Unclassified 1.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163163_10089382 3300014325 Unclassified 3092
2 Ga0065715_10165146 3300005293 Bacteria 1593
3 Ga0070683_100017082 3300005329 Bacteria 6405
4 Ga0070683_100055016 3300005329 Bacteria 3691
5 Ga0070691_10001225 3300005341 Bacteria 10796
6 Ga0070675_100176027 3300005354 Bacteria 1848
7 Ga0070674_100007710 3300005356 Bacteria 6356
8 Ga0070714_100006372 3300005435 Bacteria 9107
9 Ga0070713_100101566 3300005436 Bacteria 2492
10 Ga0070711_100001016 3300005439 Bacteria 14919
11 Ga0070678_100187359 3300005456 Bacteria 1698
12 Ga0070662_100044125 3300005457 Bacteria 3193
13 Ga0068867_100020332 3300005459 Bacteria 4730
14 Ga0070698_100007157 3300005471 Bacteria 12085
15 Ga0070698_100008651 3300005471 Bacteria 10970
16 Ga0070699_100055817 3300005518 Bacteria 3419
17 Ga0070679_100034153 3300005530 Bacteria 5039
18 Ga0070679_100198865 3300005530 Bacteria 1971
19 Ga0070697_100118702 3300005536 Bacteria 2210
20 Ga0070672_100005828 3300005543 Bacteria 8218
21 Ga0070665_100038677 3300005548 Bacteria 4796
22 Ga0070665_100056212 3300005548 Bacteria 3946
23 Ga0068857_100022632 3300005577 Bacteria 5528
24 Ga0068856_100016100 3300005614 Bacteria 7228
25 Ga0068856_100036050 3300005614 Bacteria 4850
26 Ga0068856_100153054 3300005614 Unclassified 2316
27 Ga0068856_100185040 3300005614 Bacteria 2097
28 Ga0068852_100016958 3300005616 Bacteria 5698
29 Ga0068860_100057245 3300005843 Bacteria 3706
30 Ga0068860_100155619 3300005843 Bacteria 2203
31 Ga0068862_100102615 3300005844 Bacteria 2504
32 Ga0081455_10000780 3300005937 Bacteria 40974
33 Ga0081455_10001730 3300005937 Bacteria 26441
34 Ga0081455_10003155 3300005937 Bacteria 19144
35 Ga0081455_10009019 3300005937 Bacteria 10295
36 Ga0081539_10002297 3300005985 Bacteria 27637
37 Ga0081539_10020807 3300005985 Bacteria 4413
38 Ga0081539_10027625 3300005985 Bacteria 3589
39 Ga0070717_10064922 3300006028 Bacteria 3033
40 Ga0070717_10115611 3300006028 Bacteria 2293
41 Ga0075365_10053724 3300006038 Bacteria 2669
42 Ga0075362_10002735 3300006177 Bacteria 6009
43 Ga0075362_10004015 3300006177 Bacteria 5239
44 Ga0075362_10011051 3300006177 Bacteria 3546
45 Ga0075362_10014443 3300006177 Bacteria 3188
46 Ga0075362_10035625 3300006177 Bacteria 2173
47 Ga0075367_10018418 3300006178 Bacteria 3852
48 Ga0075367_10028581 3300006178 Bacteria 3182
49 Ga0075367_10032041 3300006178 Bacteria 3022
50 Ga0075369_10001119 3300006186 Bacteria 9013
51 Ga0075369_10001744 3300006186 Bacteria 7536
52 Ga0075366_10015975 3300006195 Bacteria 4310
53 Ga0075366_10058306 3300006195 Bacteria 2294
54 Ga0075370_10036423 3300006353 Bacteria 2764
55 Ga0075428_100001670 3300006844 Bacteria 23642
56 Ga0075430_100007862 3300006846 Bacteria 9015
57 Ga0099794_10031631 3300007265 Bacteria 2479
58 Ga0099794_10031976 3300007265 Bacteria 2467
59 Ga0105240_10003345 3300009093 Bacteria 24964
60 Ga0111539_10003319 3300009094 Bacteria 21241
61 Ga0114129_10000437 3300009147 Bacteria 49415
62 Ga0105248_10120267 3300009177 Bacteria 2963
63 Ga0105238_10112038 3300009551 Bacteria 2708
64 Ga0105239_10194255 3300010375 Bacteria 2272
65 Ga0157374_10229737 3300013296 Bacteria 1822
66 Ga0157378_10139856 3300013297 Bacteria 2247
67 Ga0157372_10073416 3300013307 Bacteria 3856
68 Ga0182008_10025512 3300014497 Bacteria 3001
69 Ga0157376_10223347 3300014969 Bacteria 1746
70 Ga0213875_10000067 3300021388 Bacteria 127481
71 Ga0213871_10000760 3300021441 Bacteria 4775
72 Ga0213871_10011000 3300021441 Bacteria 2067
73 Ga0207692_10070664 3300025898 Bacteria 1838
74 Ga0207645_10068128 3300025907 Bacteria 2275
75 Ga0207643_10043451 3300025908 Bacteria 2536
76 Ga0207705_10011815 3300025909 Bacteria 6308
77 Ga0207684_10093475 3300025910 Bacteria 2564
78 Ga0207657_10079142 3300025919 Bacteria 2766
79 Ga0207681_10035661 3300025923 Bacteria 3279
80 Ga0207659_10131053 3300025926 Bacteria 1935
81 Ga0207700_10081575 3300025928 Bacteria 2526
82 Ga0207690_10052288 3300025932 Bacteria 2736
83 Ga0207670_10074748 3300025936 Bacteria 2353
84 Ga0207665_10014997 3300025939 Bacteria 5090
85 Ga0207691_10055161 3300025940 Bacteria 3623
86 Ga0207689_10113203 3300025942 Bacteria 2231
87 Ga0207712_10101001 3300025961 Bacteria 2144
88 Ga0207702_10022252 3300026078 Bacteria 5253
89 Ga0207702_10053747 3300026078 Bacteria 3410
90 Ga0207702_10065614 3300026078 Bacteria 3110
91 Ga0207702_10168915 3300026078 Bacteria 2004
92 Ga0207674_10106312 3300026116 Bacteria 2784
93 Ga0207674_10164110 3300026116 Bacteria 2175
94 Ga0207683_10017920 3300026121 Bacteria 6039
95 Ga0207698_10008277 3300026142 Bacteria 6567
96 Ga0207698_10009009 3300026142 Bacteria 6337
97 Ga0209813_10014741 3300027866 Bacteria 2109
98 Ga0207428_10009643 3300027907 Bacteria 8647
99 Ga0268266_10005797 3300028379 Bacteria 11437
100 Ga0268266_10018345 3300028379 Bacteria 5963
101 Ga0265334_10007459 3300028573 Bacteria 4691
102 Ga0265338_10062948 3300028800 Bacteria 3239
103 Ga0265332_10050115 3300031238 Bacteria 1795
104 Ga0265320_10051275 3300031240 Bacteria 2003
105 Ga0265340_10015075 3300031247 Bacteria 4023
106 Ga0307513_10045218 3300031456 Bacteria 4814
107 Ga0265314_10006669 3300031711 Bacteria 10146
108 Ga0373943_0018588 3300035170 Bacteria 3195
109 Ga0373924_0037564 3300035410 Bacteria 1973
110 Ga0373933_0006761 3300035724 Bacteria 6249
111 Ga0373937_0000675 3300036401 Bacteria 29693
112 Ga0373937_0041466 3300036401 Bacteria 4198
113 Ga0373925_0006518 3300037068 Bacteria 8582
114 Ga0373925_0078368 3300037068 Bacteria 2509
115 Ga0395899_0039260 3300037312 Bacteria 3544
116 Ga0395900_0002549 3300037418 Bacteria 19963
117 Ga0395898_0005621 3300037466 Bacteria 13518
118 Ga0395898_0028503 3300037466 Bacteria 5594
119 Ga0436364_0488895 3300037853 Bacteria 3875
120 Ga0436364_1455269 3300037853 Bacteria 29005
121 Ga0395901_0003670 3300038443 Bacteria 15482
122 Ga0436365_1633652 3300039437 Bacteria 2812
123 Ga0436360_0548806 3300039438 Bacteria 9726
124 Ga0436360_0557475 3300039438 Bacteria 4254
125 Ga0436360_1166419 3300039438 Bacteria 12426
126 Ga0436360_1177179 3300039438 Bacteria 11397
127 Ga0436361_0894493 3300039447 Bacteria 4870
128 Ga0436361_1151706 3300039447 Bacteria 4611
129 Ga0466963_0001449 3300044694 Bacteria 12788
130 Ga0495664_0038059 3300046477 Bacteria 2839
131 Ga0495645_0002043 3300046543 Bacteria 13728
132 Ga0495667_0072713 3300046559 Bacteria 2241
133 Ga0495599_0007040 3300046678 Bacteria 6802
134 Ga0495602_0000124 3300048088 Bacteria 72960
135 Ga0496100_0062359 3300048903 Bacteria 2460
136 Ga0496104_0348845 3300048907 Bacteria 1393
137 Ga0496114_0026357 3300048917 Bacteria 4758
138 Ga0496115_0010816 3300048918 Bacteria 6824
139 Ga0496119_0002527 3300048922 Bacteria 19933
140 Ga0496126_0020410 3300048929 Bacteria 6496
141 Ga0496126_0030173 3300048929 Bacteria 5141
142 Ga0496126_0104791 3300048929 Bacteria 2470
143 Ga0501034_0001143 3300049571 Bacteria 36925
144 Ga0501034_0008411 3300049571 Bacteria 10901
145 Ga0501034_0016178 3300049571 Bacteria 7651
146 Ga0501034_0067109 3300049571 Bacteria 3601
147 Ga0501068_0000930 3300049584 Bacteria 15380
148 Ga0501068_0003556 3300049584 Bacteria 8420
149 Ga0501072_0044747 3300049588 Bacteria 3480
150 Ga0501044_0033328 3300049823 Bacteria 5414
151 Ga0501044_0044910 3300049823 Bacteria 4582
152 Ga0501044_0107965 3300049823 Bacteria 2794
153 nmdc:mga03683_1043_c1 3300050489 Bacteria 8089
154 nmdc:mga03683_3188_c1 3300050489 Bacteria 5238
155 nmdc:mga03683_3278_c1 3300050489 Bacteria 5191
156 nmdc:mga03683_8014_c1 3300050489 Bacteria 3695
157 nmdc:mga0yw44_17773_c1 3300050492 Bacteria 3879
158 nmdc:mga0k408_23352_c1 3300050493 Bacteria 3487
159 nmdc:mga06z11_14005_c1 3300050494 Bacteria 3538
160 nmdc:mga06z11_49712_c1 3300050494 Bacteria 2140
161 nmdc:mga06z11_6501_c1 3300050494 Bacteria 4761
162 nmdc:mga06z11_6893_c1 3300050494 Bacteria 4649
163 nmdc:mga06z11_8594_c1 3300050494 Bacteria 4268
164 nmdc:mga07m45_6686_c1 3300050496 Bacteria 5848
165 nmdc:mga05p37_5052_c1 3300050507 Bacteria 15464
166 nmdc:mga0qj67_10237_c1 3300050509 Bacteria 7001
167 nmdc:mga08y16_1157_c1 3300050511 Bacteria 25991
168 nmdc:mga0sz30_10198_c1 3300050516 Bacteria 3595
169 nmdc:mga0sz30_6031_c1 3300050516 Bacteria 4478
170 Ga0495601_0001662 3300053077 Bacteria 12276
171 Ga0495612_0005126 3300053078 Bacteria 5415
172 Ga0500641_0000437 3300053096 Bacteria 15110
173 Ga0500616_0002006 3300053153 Bacteria 18026
174 Ga0500616_0002260 3300053153 Bacteria 16376
175 Ga0500552_000476 3300053733 Bacteria 3704
176 Ga0501082_0000106 3300060353 Bacteria 65983
177 Ga0163163_10089382
178 Ga0065715_10165146
179 Ga0070683_100017082
180 Ga0070683_100055016
181 Ga0070691_10001225
182 Ga0070675_100176027
183 Ga0070674_100007710
184 Ga0070714_100006372
185 Ga0070713_100101566
186 Ga0070711_100001016
187 Ga0070678_100187359
188 Ga0070662_100044125
189 Ga0068867_100020332
190 Ga0070698_100007157
191 Ga0070698_100008651
192 Ga0070699_100055817
193 Ga0070679_100034153
194 Ga0070679_100198865
195 Ga0070697_100118702
196 Ga0070672_100005828
197 Ga0070665_100038677
198 Ga0070665_100056212
199 Ga0068857_100022632
200 Ga0068856_100016100
201 Ga0068856_100036050
202 Ga0068856_100153054
203 Ga0068856_100185040
204 Ga0068852_100016958
205 Ga0068860_100057245
206 Ga0068860_100155619
207 Ga0068862_100102615
208 Ga0081455_10000780
209 Ga0081455_10001730
210 Ga0081455_10003155
211 Ga0081455_10009019
212 Ga0081539_10002297
213 Ga0081539_10020807
214 Ga0081539_10027625
215 Ga0070717_10064922
216 Ga0070717_10115611
217 Ga0075365_10053724
218 Ga0075362_10002735
219 Ga0075362_10004015
220 Ga0075362_10011051
221 Ga0075362_10014443
222 Ga0075362_10035625
223 Ga0075367_10018418
224 Ga0075367_10028581
225 Ga0075367_10032041
226 Ga0075369_10001119
227 Ga0075369_10001744
228 Ga0075366_10015975
229 Ga0075366_10058306
230 Ga0075370_10036423
231 Ga0075428_100001670
232 Ga0075430_100007862
233 Ga0099794_10031631
234 Ga0099794_10031976
235 Ga0105240_10003345
236 Ga0111539_10003319
237 Ga0114129_10000437
238 Ga0105248_10120267
239 Ga0105238_10112038
240 Ga0105239_10194255
241 Ga0157374_10229737
242 Ga0157378_10139856
243 Ga0157372_10073416
244 Ga0182008_10025512
245 Ga0157376_10223347
246 Ga0213875_10000067
247 Ga0213871_10000760
248 Ga0213871_10011000
249 Ga0207692_10070664
250 Ga0207645_10068128
251 Ga0207643_10043451
252 Ga0207705_10011815
253 Ga0207684_10093475
254 Ga0207657_10079142
255 Ga0207681_10035661
256 Ga0207659_10131053
257 Ga0207700_10081575
258 Ga0207690_10052288
259 Ga0207670_10074748
260 Ga0207665_10014997
261 Ga0207691_10055161
262 Ga0207689_10113203
263 Ga0207712_10101001
264 Ga0207702_10022252
265 Ga0207702_10053747
266 Ga0207702_10065614
267 Ga0207702_10168915
268 Ga0207674_10106312
269 Ga0207674_10164110
270 Ga0207683_10017920
271 Ga0207698_10008277
272 Ga0207698_10009009
273 Ga0209813_10014741
274 Ga0207428_10009643
275 Ga0268266_10005797
276 Ga0268266_10018345
277 Ga0265334_10007459
278 Ga0265338_10062948
279 Ga0265332_10050115
280 Ga0265320_10051275
281 Ga0265340_10015075
282 Ga0307513_10045218
283 Ga0265314_10006669
284 Ga0373943_0018588
285 Ga0373924_0037564
286 Ga0373933_0006761
287 Ga0373937_0000675
288 Ga0373937_0041466
289 Ga0373925_0006518
290 Ga0373925_0078368
291 Ga0395899_0039260
292 Ga0395900_0002549
293 Ga0395898_0005621
294 Ga0395898_0028503
295 Ga0436364_0488895
296 Ga0436364_1455269
297 Ga0395901_0003670
298 Ga0436365_1633652
299 Ga0436360_0548806
300 Ga0436360_0557475
301 Ga0436360_1166419
302 Ga0436360_1177179
303 Ga0436361_0894493
304 Ga0436361_1151706
305 Ga0466963_0001449
306 Ga0495664_0038059
307 Ga0495645_0002043
308 Ga0495667_0072713
309 Ga0495599_0007040
310 Ga0495602_0000124
311 Ga0496100_0062359
312 Ga0496104_0348845
313 Ga0496114_0026357
314 Ga0496115_0010816
315 Ga0496119_0002527
316 Ga0496126_0020410
317 Ga0496126_0030173
318 Ga0496126_0104791
319 Ga0501034_0001143
320 Ga0501034_0008411
321 Ga0501034_0016178
322 Ga0501034_0067109
323 Ga0501068_0000930
324 Ga0501068_0003556
325 Ga0501072_0044747
326 Ga0501044_0033328
327 Ga0501044_0044910
328 Ga0501044_0107965
329 nmdc:mga03683_1043_c1
330 nmdc:mga03683_3188_c1
331 nmdc:mga03683_3278_c1
332 nmdc:mga03683_8014_c1
333 nmdc:mga0yw44_17773_c1
334 nmdc:mga0k408_23352_c1
335 nmdc:mga06z11_14005_c1
336 nmdc:mga06z11_49712_c1
337 nmdc:mga06z11_6501_c1
338 nmdc:mga06z11_6893_c1
339 nmdc:mga06z11_8594_c1
340 nmdc:mga07m45_6686_c1
341 nmdc:mga05p37_5052_c1
342 nmdc:mga0qj67_10237_c1
343 nmdc:mga08y16_1157_c1
344 nmdc:mga0sz30_10198_c1
345 nmdc:mga0sz30_6031_c1
346 Ga0495601_0001662
347 Ga0495612_0005126
348 Ga0500641_0000437
349 Ga0500616_0002006
350 Ga0500616_0002260
351 Ga0500552_000476
352 Ga0501082_0000106

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

101

460

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kz9-assembly2.cif.gz_B crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa 0.9451 25 500
7kz9-assembly2.cif.gz_B crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa 0.9355 25 500
4xkr-assembly1.cif.gz_A crystal structure of nika from staphylococcus aureus in complex with ni-(l-his)(2-methyl-thiazolidine dicarboxylate) (co-crystallization with ni(ii) and cddeltahis medium supernatant) 0.9224 25 503
1dpp-assembly4.cif.gz_G dipeptide binding protein complex with glycyl-l-leucine 0.9219 25 503
5f1q-assembly2.cif.gz_B crystal structure of periplasmic dipeptide transport protein from yersinia pestis 0.9194 25 503
ID Description Score Start End Superfamily
af_P75797_27_224_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9666 24 218 3.10.105.10
4qflB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9648 181 256 3.40.190.10
5f1qB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9512 181 255 3.40.190.10
af_P75797_27_224_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9476 24 218 3.10.105.10
4oeuB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9469 173 257 3.40.190.10
ID Description Score Start End GO Terms
AF-H0SYT6-F1-model_v4 Putative ABC transporter substrate-binding protein 0.9957 22 503 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A1E4PZJ5-F1-model_v4 ABC transporter substrate-binding protein 0.9861 19 502 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-H0SYT6-F1-model_v4 Putative ABC transporter substrate-binding protein 0.9754 22 503 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A2P8DF83-F1-model_v4 Peptide/nickel transport system substrate-binding protein 0.9744 23 502 GO:0015833
GO:0042597
GO:0043190
GO:1904680
AF-A0A849BLB4-F1-model_v4 ABC transporter substrate-binding protein 0.9731 23 502 GO:0015833
GO:0042597
GO:0043190
GO:1904680

Map