F273773

General Info

Members Datasets Scaffolds Average Seq Length
179 130 350 619

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10000041|Ga0105238_10000041102
Length 678
Sequence LALEGHDRRGFLRPNDRAVIAALPPLAILNAPAKSPHRTLRDCADRCIDRLRGNGLGPEHHTREEPTGRRLFSLSLLALGIVYGDIGTSPLYAMRECFYGAHPVPLTQPNVLGVLSLIFWSLVIVVMIKYHIYVLRFDNRGEGGILALMGLVGMDKSRRAAVRSTLVVLGVFGAALLYGDGMITPAISVLSAVEGLEIATPFFKPYVIPLTIRRGTAGVGSVFGPIMLVWFSVLALMGIRGILWQPSVLFALNPMHAIRFFIANGMHGFLVLGAVFLVTTGGEALYADLGHFGEKPIQIDWFSIVGPSLVLHYFGQGALLIRNPGAAHNPFYLLAPKWALYPLVILSTMATVIASQAIISGVFSLTRQAIQLGYLPRMEIVHTSRAEIGQVYIPSVNWALMFCTIALVIGFRSSTNLAGAYGLAVSTTMIITTILAYVVARDLLGWSVAFASLVTVAFLIPDVAFLGANLAKIADGGWFPLLIASIVFLIMTTWRRGRQILNERLRDGALSPEDFVKSLTSHPPVRVPGTAVFMHRSGGVIPPALLHSLKHYKALHKQVMLLTVMTEEVSHLNDDERLVVEDLGEGIFRITCRYGYMEEADIPALLERVSRELHVAIPPMDTTYFLGRETLIVTSRESGMATWREKIFASMMRNAESAARFFRLPPNRVVELGAQIEF

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
87 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
88 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
96 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
123 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
126 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
127 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
128 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
129 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
130 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.21
Metatranscriptomes 0
Isolates 2.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 4.47
Rhizosphere 90.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10000041 3300009551 Bacteria 155330
2 Ga0065707_10010881 3300005295 Bacteria 3167
3 Ga0070683_100003318 3300005329 Bacteria 13013
4 Ga0070670_100000080 3300005331 Bacteria 92128
5 Ga0068869_100008976 3300005334 Bacteria 6473
6 Ga0070666_10003501 3300005335 Bacteria 9512
7 Ga0070682_100000002 3300005337 Bacteria 506802
8 Ga0068868_100000150 3300005338 Bacteria 45102
9 Ga0068868_100000194 3300005338 Bacteria 40594
10 Ga0068868_100033360 3300005338 Bacteria 3967
11 Ga0068868_100075772 3300005338 Bacteria 2689
12 Ga0070660_100061878 3300005339 Bacteria 2907
13 Ga0070689_100002357 3300005340 Bacteria 12303
14 Ga0070687_100007975 3300005343 Bacteria 4459
15 Ga0070692_10002551 3300005345 Bacteria 7096
16 Ga0070669_100038516 3300005353 Bacteria 3471
17 Ga0070675_100000012 3300005354 Bacteria 217352
18 Ga0070667_100016229 3300005367 Bacteria 6161
19 Ga0070713_100021424 3300005436 Bacteria 4971
20 Ga0070701_10004058 3300005438 Bacteria 5875
21 Ga0070708_100025495 3300005445 Bacteria 5054
22 Ga0070708_100133074 3300005445 Bacteria 2302
23 Ga0070663_100005772 3300005455 Bacteria 7386
24 Ga0070681_10010871 3300005458 Bacteria 8996
25 Ga0070706_100039434 3300005467 Bacteria 4361
26 Ga0070707_100041451 3300005468 Bacteria 4407
27 Ga0070698_100000123 3300005471 Bacteria 67024
28 Ga0070698_100109832 3300005471 Bacteria 2724
29 Ga0070684_100002749 3300005535 Bacteria 13013
30 Ga0070697_100024114 3300005536 Bacteria 4842
31 Ga0070697_100076454 3300005536 Bacteria 2753
32 Ga0070697_100078191 3300005536 Bacteria 2722
33 Ga0068853_100046868 3300005539 Bacteria 3708
34 Ga0068853_100059065 3300005539 Bacteria 3312
35 Ga0070672_100001005 3300005543 Bacteria 17091
36 Ga0070693_100002455 3300005547 Bacteria 8543
37 Ga0070693_100034677 3300005547 Bacteria 2793
38 Ga0070704_100023758 3300005549 Bacteria 4011
39 Ga0068859_100000008 3300005617 Bacteria 383750
40 Ga0068859_100119584 3300005617 Bacteria 2701
41 Ga0068864_100000046 3300005618 Bacteria 151661
42 Ga0068858_100000470 3300005842 Bacteria 42012
43 Ga0068860_100001955 3300005843 Bacteria 21783
44 Ga0068860_100157522 3300005843 Bacteria 2189
45 Ga0068862_100016221 3300005844 Bacteria 6198
46 Ga0081538_10014146 3300005981 Bacteria 6268
47 Ga0070717_10000107 3300006028 Bacteria 65970
48 Ga0075365_10029749 3300006038 Bacteria 3494
49 Ga0075428_100096672 3300006844 Bacteria 3219
50 Ga0075431_100000376 3300006847 Bacteria 35649
51 Ga0075431_100006275 3300006847 Bacteria 11812
52 Ga0075434_100073008 3300006871 Bacteria 3423
53 Ga0075429_100014752 3300006880 Bacteria 6772
54 Ga0075436_100000129 3300006914 Bacteria 44777
55 Ga0075436_100069519 3300006914 Bacteria 2433
56 Ga0097620_100000008 3300006931 Bacteria 383750
57 Ga0097620_100119582 3300006931 Bacteria 2701
58 Ga0075435_100077746 3300007076 Bacteria 2721
59 Ga0099794_10003209 3300007265 Bacteria 6200
60 Ga0111539_10000193 3300009094 Bacteria 71342
61 Ga0111539_10001056 3300009094 Bacteria 36242
62 Ga0105245_10000014 3300009098 Bacteria 230684
63 Ga0105245_10000422 3300009098 Bacteria 39398
64 Ga0105245_10002002 3300009098 Bacteria 18493
65 Ga0105245_10052555 3300009098 Bacteria 3654
66 Ga0105247_10002603 3300009101 Bacteria 12192
67 Ga0105247_10025950 3300009101 Bacteria 3537
68 Ga0114129_10001479 3300009147 Bacteria 31834
69 Ga0105242_10006626 3300009176 Bacteria 8928
70 Ga0105249_10009300 3300009553 Bacteria 8594
71 Ga0157369_10000232 3300013105 Bacteria 77009
72 Ga0157374_10000006 3300013296 Bacteria 640284
73 Ga0157378_10000136 3300013297 Bacteria 69380
74 Ga0157378_10000273 3300013297 Bacteria 50350
75 Ga0157378_10037276 3300013297 Bacteria 4306
76 Ga0163162_10000797 3300013306 Bacteria 29330
77 Ga0163162_10034579 3300013306 Bacteria 5030
78 Ga0157375_10000002 3300013308 Bacteria 495826
79 Ga0157375_10000059 3300013308 Bacteria 118614
80 Ga0157380_10027134 3300014326 Bacteria 4353
81 Ga0157377_10000011 3300014745 Bacteria 305350
82 Ga0157376_10000013 3300014969 Bacteria 304287
83 Ga0157376_10014144 3300014969 Bacteria 5977
84 Ga0213873_10000606 3300021358 Bacteria 5845
85 Ga0213876_10000018 3300021384 Bacteria 282299
86 Ga0207710_10000103 3300025900 Bacteria 109033
87 Ga0207680_10001786 3300025903 Bacteria 10156
88 Ga0207647_10054975 3300025904 Bacteria 2447
89 Ga0207684_10010215 3300025910 Bacteria 8264
90 Ga0207684_10067599 3300025910 Bacteria 3037
91 Ga0207707_10045465 3300025912 Bacteria 3826
92 Ga0207693_10048764 3300025915 Bacteria 3326
93 Ga0207652_10015029 3300025921 Bacteria 6278
94 Ga0207694_10000001 3300025924 Bacteria 4078485
95 Ga0207650_10000026 3300025925 Bacteria 264152
96 Ga0207659_10000003 3300025926 Bacteria 523949
97 Ga0207687_10000010 3300025927 Bacteria 403706
98 Ga0207687_10001145 3300025927 Bacteria 18047
99 Ga0207687_10001164 3300025927 Bacteria 17956
100 Ga0207670_10000369 3300025936 Bacteria 26038
101 Ga0207691_10015969 3300025940 Bacteria 7133
102 Ga0207689_10001641 3300025942 Bacteria 21192
103 Ga0207689_10010363 3300025942 Bacteria 8032
104 Ga0207661_10000022 3300025944 Bacteria 198514
105 Ga0207661_10005585 3300025944 Bacteria 8869
106 Ga0207712_10026006 3300025961 Bacteria 3895
107 Ga0207677_10000019 3300026023 Bacteria 138434
108 Ga0207677_10000048 3300026023 Bacteria 101555
109 Ga0207677_10016279 3300026023 Bacteria 4398
110 Ga0207677_10019698 3300026023 Bacteria 4081
111 Ga0207703_10000041 3300026035 Bacteria 164313
112 Ga0207703_10090365 3300026035 Bacteria 2574
113 Ga0207676_10000008 3300026095 Bacteria 588913
114 Ga0207674_10024738 3300026116 Bacteria 6409
115 Ga0207675_100012282 3300026118 Bacteria 8001
116 Ga0207675_100022549 3300026118 Bacteria 5863
117 Ga0207428_10000564 3300027907 Bacteria 43815
118 Ga0268265_10054147 3300028380 Bacteria 3042
119 Ga0268264_10003176 3300028381 Bacteria 14234
120 Ga0265337_1000069 3300028556 Bacteria 47825
121 Ga0265319_1001238 3300028563 Bacteria 15657
122 Ga0307511_10001902 3300030521 Bacteria 21920
123 Ga0307508_10010593 3300031616 Bacteria 8433
124 Ga0316576_10046836 3300031727 Bacteria 3131
125 Ga0307413_10067518 3300031824 Bacteria 2236
126 Ga0307411_10021581 3300032005 Bacteria 3772
127 Ga0316580_10002688 3300032139 Bacteria 4940
128 Ga0373932_0000042 3300035112 Bacteria 30323
129 Ga0373941_0001681 3300035115 Bacteria 4738
130 Ga0316574_0001851 3300035398 Bacteria 10313
131 Ga0373935_0017336 3300035692 Bacteria 4367
132 Ga0316584_0004407 3300036712 Bacteria 9321
133 Ga0436365_0306091 3300039437 Bacteria 89501
134 Ga0436361_0831185 3300039447 Bacteria 5003
135 Ga0436362_0977542 3300039453 Bacteria 7241
136 Ga0451839_0672824 3300041496 Bacteria 3376
137 Ga0451577_0006551 3300042876 Bacteria 11585
138 Ga0451577_0024379 3300042876 Bacteria 5504
139 Ga0451577_0163687 3300042876 Bacteria 2004
140 Ga0453683_0035182 3300044673 Bacteria 3156
141 Ga0453684_0014205 3300044712 Bacteria 12783
142 Ga0451576_0025371 3300045051 Bacteria 6384
143 Ga0495667_0000015 3300046559 Bacteria 200377
144 Ga0495649_0035238 3300046694 Bacteria 2753
145 Ga0495604_0000056 3300047317 Bacteria 100110
146 Ga0495674_0000025 3300047319 Bacteria 141103
147 Ga0495680_0008002 3300047322 Bacteria 9635
148 Ga0496102_0024047 3300048905 Bacteria 5415
149 Ga0496104_0000295 3300048907 Bacteria 44112
150 Ga0496105_0005129 3300048908 Bacteria 9933
151 Ga0496106_0010152 3300048909 Bacteria 6956
152 Ga0496114_0000018 3300048917 Bacteria 251239
153 Ga0496114_0028554 3300048917 Bacteria 4579
154 Ga0496114_0039056 3300048917 Bacteria 3929
155 nmdc:mga05p37_167688_c1 3300050507 Bacteria 2679
156 nmdc:mga05p37_19421_c1 3300050507 Bacteria 8222
157 nmdc:mga05p37_73401_c1 3300050507 Bacteria 4211
158 nmdc:mga09592_3549_c1 3300050508 Bacteria 12593
159 nmdc:mga06r32_2222_c1 3300050510 Bacteria 17382
160 nmdc:mga06r32_5005_c1 3300050510 Bacteria 11930
161 nmdc:mga08y16_2607_c1 3300050511 Bacteria 18517
162 nmdc:mga08y16_46040_c1 3300050511 Bacteria 4568
163 nmdc:mga08y16_838_c1 3300050511 Bacteria 29488
164 nmdc:mga0n895_85348_c1 3300050512 Bacteria 3152
165 nmdc:mga0rr50_46333_c1 3300050513 Bacteria 3201
166 nmdc:mga08x19_60269_c1 3300050514 Bacteria 2458
167 nmdc:mga08x19_90_c1 3300050514 Bacteria 81822
168 Ga0495601_0007877 3300053077 Bacteria 6275
169 Ga0495601_0024232 3300053077 Bacteria 3737
170 Ga0495655_0000397 3300053083 Bacteria 7367
171 2524612916 2524023250 Bacteria 5457705
172 2525557495 2524614729 Bacteria 3091755
173 2538834248 2537561836 Bacteria 3910579
174 2630649086 2627854209 Bacteria 3093011
175 2643831271 2643221562 Bacteria 4048635
176 Ga0105238_10000041
177 Ga0065707_10010881
178 Ga0070683_100003318
179 Ga0070670_100000080
180 Ga0068869_100008976
181 Ga0070666_10003501
182 Ga0070682_100000002
183 Ga0068868_100000150
184 Ga0068868_100000194
185 Ga0068868_100033360
186 Ga0068868_100075772
187 Ga0070660_100061878
188 Ga0070689_100002357
189 Ga0070687_100007975
190 Ga0070692_10002551
191 Ga0070669_100038516
192 Ga0070675_100000012
193 Ga0070667_100016229
194 Ga0070713_100021424
195 Ga0070701_10004058
196 Ga0070708_100025495
197 Ga0070708_100133074
198 Ga0070663_100005772
199 Ga0070681_10010871
200 Ga0070706_100039434
201 Ga0070707_100041451
202 Ga0070698_100000123
203 Ga0070698_100109832
204 Ga0070684_100002749
205 Ga0070697_100024114
206 Ga0070697_100076454
207 Ga0070697_100078191
208 Ga0068853_100046868
209 Ga0068853_100059065
210 Ga0070672_100001005
211 Ga0070693_100002455
212 Ga0070693_100034677
213 Ga0070704_100023758
214 Ga0068859_100000008
215 Ga0068859_100119584
216 Ga0068864_100000046
217 Ga0068858_100000470
218 Ga0068860_100001955
219 Ga0068860_100157522
220 Ga0068862_100016221
221 Ga0081538_10014146
222 Ga0070717_10000107
223 Ga0075365_10029749
224 Ga0075428_100096672
225 Ga0075431_100000376
226 Ga0075431_100006275
227 Ga0075434_100073008
228 Ga0075429_100014752
229 Ga0075436_100000129
230 Ga0075436_100069519
231 Ga0097620_100000008
232 Ga0097620_100119582
233 Ga0075435_100077746
234 Ga0099794_10003209
235 Ga0111539_10000193
236 Ga0111539_10001056
237 Ga0105245_10000014
238 Ga0105245_10000422
239 Ga0105245_10002002
240 Ga0105245_10052555
241 Ga0105247_10002603
242 Ga0105247_10025950
243 Ga0114129_10001479
244 Ga0105242_10006626
245 Ga0105249_10009300
246 Ga0157369_10000232
247 Ga0157374_10000006
248 Ga0157378_10000136
249 Ga0157378_10000273
250 Ga0157378_10037276
251 Ga0163162_10000797
252 Ga0163162_10034579
253 Ga0157375_10000002
254 Ga0157375_10000059
255 Ga0157380_10027134
256 Ga0157377_10000011
257 Ga0157376_10000013
258 Ga0157376_10014144
259 Ga0213873_10000606
260 Ga0213876_10000018
261 Ga0207710_10000103
262 Ga0207680_10001786
263 Ga0207647_10054975
264 Ga0207684_10010215
265 Ga0207684_10067599
266 Ga0207707_10045465
267 Ga0207693_10048764
268 Ga0207652_10015029
269 Ga0207694_10000001
270 Ga0207650_10000026
271 Ga0207659_10000003
272 Ga0207687_10000010
273 Ga0207687_10001145
274 Ga0207687_10001164
275 Ga0207670_10000369
276 Ga0207691_10015969
277 Ga0207689_10001641
278 Ga0207689_10010363
279 Ga0207661_10000022
280 Ga0207661_10005585
281 Ga0207712_10026006
282 Ga0207677_10000019
283 Ga0207677_10000048
284 Ga0207677_10016279
285 Ga0207677_10019698
286 Ga0207703_10000041
287 Ga0207703_10090365
288 Ga0207676_10000008
289 Ga0207674_10024738
290 Ga0207675_100012282
291 Ga0207675_100022549
292 Ga0207428_10000564
293 Ga0268265_10054147
294 Ga0268264_10003176
295 Ga0265337_1000069
296 Ga0265319_1001238
297 Ga0307511_10001902
298 Ga0307508_10010593
299 Ga0316576_10046836
300 Ga0307413_10067518
301 Ga0307411_10021581
302 Ga0316580_10002688
303 Ga0373932_0000042
304 Ga0373941_0001681
305 Ga0316574_0001851
306 Ga0373935_0017336
307 Ga0316584_0004407
308 Ga0436365_0306091
309 Ga0436361_0831185
310 Ga0436362_0977542
311 Ga0451839_0672824
312 Ga0451577_0006551
313 Ga0451577_0024379
314 Ga0451577_0163687
315 Ga0453683_0035182
316 Ga0453684_0014205
317 Ga0451576_0025371
318 Ga0495667_0000015
319 Ga0495649_0035238
320 Ga0495604_0000056
321 Ga0495674_0000025
322 Ga0495680_0008002
323 Ga0496102_0024047
324 Ga0496104_0000295
325 Ga0496105_0005129
326 Ga0496106_0010152
327 Ga0496114_0000018
328 Ga0496114_0028554
329 Ga0496114_0039056
330 nmdc:mga05p37_167688_c1
331 nmdc:mga05p37_19421_c1
332 nmdc:mga05p37_73401_c1
333 nmdc:mga09592_3549_c1
334 nmdc:mga06r32_2222_c1
335 nmdc:mga06r32_5005_c1
336 nmdc:mga08y16_2607_c1
337 nmdc:mga08y16_46040_c1
338 nmdc:mga08y16_838_c1
339 nmdc:mga0n895_85348_c1
340 nmdc:mga0rr50_46333_c1
341 nmdc:mga08x19_60269_c1
342 nmdc:mga08x19_90_c1
343 Ga0495601_0007877
344 Ga0495601_0024232
345 Ga0495655_0000397
346 2524612916
347 2525557495
348 2538834248
349 2630649086
350 2643831271

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22776

K_trans_C

K+ potassium transporter C-terminal domain

528

678

0.99

PF02705

K_trans

K+ potassium transporter integral membrane domain

74

518

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6899 11 445
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.672 12 446
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.6612 12 446
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6579 11 445
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.6442 11 448
ID Description Score Start End Superfamily
af_Q69RI8_116_588_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9684 16 447 1.20.1740.10
af_Q5JK32_78_523_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9628 29 435 1.20.1740.10
af_Q652J4_30_507_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9585 15 449 1.20.1740.10
af_Q942X8_26_493_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9583 16 441 1.20.1740.10
af_Q84YJ9_78_550_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9563 16 447 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A6D0F7Y8-F1-model_v4 deleted 0.991 123 353
AF-A0A430BF35-F1-model_v4 Probable potassium transport system protein Kup 0.9906 8 624 GO:0005886
GO:0015079
GO:0015293
AF-A0A0N1C0D8-F1-model_v4 Probable potassium transport system protein Kup 0.9901 20 624 GO:0005886
GO:0015079
GO:0015293
AF-A0A2W5NL25-F1-model_v4 Probable potassium transport system protein Kup 0.9883 8 624 GO:0005886
GO:0015079
GO:0015293
AF-Q21VE7-F1-model_v4 Probable potassium transport system protein Kup 2 0.9873 5 624 GO:0005886
GO:0015079
GO:0015293

Map