F273769

General Info

Members Datasets Scaffolds Average Seq Length
179 118 358 330

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10133668|Ga0105248_101336682
Length 350
Sequence MQQLQTIAPHLEGHTMKSLTRGPFPHTRMRRMRAADFSRRMMRENVLTPNDLIYPVFVLEGNNQREPIASMPGIERLSIDLLIEEAKAIHALGVPALALFPVTPARVKSLLAEEAYNPNGLAQRAVMALKDAVPELGIITDVALDPFTTHGQDGIIDDNGYVLNDITIEILCKQALSHAQAGVDIVAPSDMMDGRIRATRDVLESAGFVNTRILAYSAKYASSYYGPFRDAVGSSANLKGADKYSYQMDPANSDEALHECALDLAEGADMIMIKPGMPYLDIVRRVKDELAAPTFVYQVSGEYAMHMAAIQNGWLNENAVMMESLLAFKRAGADGILTYFAKRAAQLMNG

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
70 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
80 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
87 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
88 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
89 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
90 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
91 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
92 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
93 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
94 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
99 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
107 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
110 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
111 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
112 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
113 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
114 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
115 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
116 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
117 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
118 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.65
Metatranscriptomes 0
Isolates 3.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.68
Nodule 0.56
Rhizoplane 0
Rhizosphere 81.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10133668 3300009177 Bacteria 2799
2 rootH1_10252860 3300003323 Bacteria 4769
3 Ga0065714_10078772 3300005288 Bacteria 2569
4 Ga0065704_10157959 3300005289 Bacteria 1376
5 Ga0070690_100114549 3300005330 Bacteria 1803
6 Ga0070670_100000019 3300005331 Bacteria 215812
7 Ga0070670_100198305 3300005331 Bacteria 1744
8 Ga0070668_100083739 3300005347 Bacteria 2504
9 Ga0070669_100010809 3300005353 Bacteria 6481
10 Ga0070671_100000340 3300005355 Bacteria 32103
11 Ga0070688_100022625 3300005365 Bacteria 3687
12 Ga0070667_100000020 3300005367 Bacteria 215812
13 Ga0070714_100028881 3300005435 Bacteria 4606
14 Ga0070694_100158189 3300005444 Bacteria 1660
15 Ga0070708_100268744 3300005445 Bacteria 1604
16 Ga0070662_100004081 3300005457 Bacteria 9176
17 Ga0070685_10000085 3300005466 Bacteria 57113
18 Ga0070699_100012084 3300005518 Bacteria 7450
19 Ga0070696_100000267 3300005546 Bacteria 31493
20 Ga0070665_100015703 3300005548 Bacteria 7607
21 Ga0068857_100121407 3300005577 Bacteria 2353
22 Ga0068854_100076229 3300005578 Bacteria 2464
23 Ga0068859_100021530 3300005617 Bacteria 6471
24 Ga0068859_100103592 3300005617 Bacteria 2904
25 Ga0068859_100135010 3300005617 Bacteria 2540
26 Ga0068864_100000030 3300005618 Bacteria 215812
27 Ga0068864_100003003 3300005618 Bacteria 13942
28 Ga0068861_100002040 3300005719 Bacteria 13079
29 Ga0068860_100000688 3300005843 Bacteria 38920
30 Ga0068860_100377971 3300005843 Bacteria 1398
31 Ga0068860_100438011 3300005843 Bacteria 1298
32 Ga0068862_100000499 3300005844 Bacteria 41773
33 Ga0068862_100001386 3300005844 Bacteria 22487
34 Ga0068862_100111388 3300005844 Bacteria 2403
35 Ga0068862_100158545 3300005844 Bacteria 2019
36 Ga0068862_100431445 3300005844 Bacteria 1239
37 Ga0075428_100059787 3300006844 Bacteria 4172
38 Ga0097620_100021533 3300006931 Bacteria 6471
39 Ga0097620_100103584 3300006931 Bacteria 2904
40 Ga0097620_100135008 3300006931 Bacteria 2540
41 Ga0079104_1009012 3300006946 Bacteria 3424
42 Ga0105240_10039424 3300009093 Bacteria 6050
43 Ga0105240_10075198 3300009093 Bacteria 4167
44 Ga0111539_10055806 3300009094 Bacteria 4696
45 Ga0105245_10082373 3300009098 Bacteria 2943
46 Ga0114129_10002232 3300009147 Bacteria 26730
47 Ga0105248_10328923 3300009177 Bacteria 1721
48 Ga0105249_10002336 3300009553 Bacteria 16469
49 Ga0105249_10039620 3300009553 Bacteria 4278
50 Ga0157374_10041772 3300013296 Bacteria 4228
51 Ga0163162_10147853 3300013306 Bacteria 2466
52 Ga0157375_10090434 3300013308 Bacteria 3120
53 Ga0157375_10399640 3300013308 Bacteria 1541
54 Ga0163163_10000125 3300014325 Bacteria 80596
55 Ga0157380_10520471 3300014326 Bacteria 1160
56 Ga0213872_10000728 3300021361 Bacteria 24568
57 Ga0207710_10007404 3300025900 Bacteria 4649
58 Ga0207680_10043769 3300025903 Bacteria 2628
59 Ga0207645_10072355 3300025907 Bacteria 2207
60 Ga0207684_10000128 3300025910 Bacteria 139233
61 Ga0207707_10010487 3300025912 Bacteria 8040
62 Ga0207695_10038092 3300025913 Bacteria 5181
63 Ga0207681_10007990 3300025923 Bacteria 6469
64 Ga0207681_10092770 3300025923 Bacteria 2159
65 Ga0207650_10000034 3300025925 Bacteria 215826
66 Ga0207687_10004606 3300025927 Bacteria 9179
67 Ga0207687_10077560 3300025927 Bacteria 2390
68 Ga0207664_10065416 3300025929 Bacteria 2911
69 Ga0207644_10000706 3300025931 Bacteria 21223
70 Ga0207706_10031666 3300025933 Bacteria 4711
71 Ga0207669_10303323 3300025937 Bacteria 1215
72 Ga0207691_10156628 3300025940 Bacteria 2000
73 Ga0207711_10029810 3300025941 Bacteria 4603
74 Ga0207679_10197997 3300025945 Bacteria 1676
75 Ga0207658_10000015 3300025986 Bacteria 215826
76 Ga0207641_10005974 3300026088 Bacteria 10315
77 Ga0207641_10020456 3300026088 Bacteria 5434
78 Ga0207648_10041106 3300026089 Bacteria 4061
79 Ga0207676_10000032 3300026095 Bacteria 215826
80 Ga0207676_10016759 3300026095 Bacteria 5305
81 Ga0207674_10032063 3300026116 Bacteria 5513
82 Ga0207675_100004915 3300026118 Bacteria 12877
83 Ga0207675_100048466 3300026118 Bacteria 3966
84 Ga0207428_10022412 3300027907 Bacteria 5331
85 Ga0268265_10000527 3300028380 Bacteria 39032
86 Ga0268265_10001517 3300028380 Bacteria 19354
87 Ga0268265_10072593 3300028380 Bacteria 2685
88 Ga0268265_10089935 3300028380 Bacteria 2451
89 Ga0268264_10000230 3300028381 Bacteria 108188
90 Ga0268264_10182788 3300028381 Bacteria 1905
91 Ga0265327_10000044 3300031251 Bacteria 284808
92 Ga0307513_10046556 3300031456 Bacteria 4727
93 Ga0265313_10000113 3300031595 Bacteria 81921
94 Ga0316575_10008981 3300031665 Bacteria 3651
95 Ga0316575_10057527 3300031665 Bacteria 1550
96 Ga0316579_10005077 3300031691 Bacteria 5279
97 Ga0265314_10020029 3300031711 Bacteria 5170
98 Ga0316576_10000630 3300031727 Bacteria 17013
99 Ga0316576_10024579 3300031727 Bacteria 4207
100 Ga0316576_10032861 3300031727 Bacteria 3689
101 Ga0316576_10129752 3300031727 Bacteria 1896
102 Ga0316578_10009868 3300031728 Bacteria 4929
103 Ga0316578_10084204 3300031728 Bacteria 1894
104 Ga0316578_10090698 3300031728 Bacteria 1825
105 Ga0316578_10114265 3300031728 Bacteria 1622
106 Ga0316578_10154314 3300031728 Bacteria 1384
107 Ga0307405_10202511 3300031731 Bacteria 1443
108 Ga0316577_10004919 3300031733 Bacteria 6961
109 Ga0316577_10103660 3300031733 Bacteria 1595
110 Ga0316577_10157453 3300031733 Bacteria 1281
111 Ga0307412_10000226 3300031911 Bacteria 37690
112 Ga0307412_10043311 3300031911 Bacteria 2930
113 Ga0307409_100284169 3300031995 Bacteria 1531
114 Ga0316585_10003449 3300032137 Bacteria 4344
115 Ga0316580_10004424 3300032139 Bacteria 4073
116 Ga0373936_0027936 3300035113 Bacteria 2215
117 Ga0373936_0120653 3300035113 Bacteria 1120
118 Ga0316574_0007488 3300035398 Bacteria 5986
119 Ga0316574_0016998 3300035398 Bacteria 4248
120 Ga0316574_0020591 3300035398 Bacteria 3905
121 Ga0316574_0089682 3300035398 Bacteria 1959
122 Ga0316574_0140770 3300035398 Bacteria 1554
123 Ga0316574_0146590 3300035398 Bacteria 1521
124 Ga0373937_0300335 3300036401 Bacteria 1517
125 Ga0316582_0005351 3300036647 Bacteria 6600
126 Ga0316582_0024752 3300036647 Bacteria 3596
127 Ga0316582_0115716 3300036647 Bacteria 1789
128 Ga0316582_0180265 3300036647 Bacteria 1437
129 Ga0316584_0067525 3300036712 Bacteria 2680
130 Ga0316584_0076580 3300036712 Bacteria 2506
131 Ga0316584_0111698 3300036712 Bacteria 2045
132 Ga0395900_0097848 3300037418 Bacteria 3015
133 Ga0316581_0000257 3300037588 Bacteria 9226
134 Ga0400484_33483 3300038725 Bacteria 10726
135 Ga0400490_48648 3300038726 Bacteria 9599
136 Ga0400491_22515 3300038727 Bacteria 4900
137 Ga0400485_18805 3300038735 Bacteria 1552
138 Ga0400488_36347 3300038741 Bacteria 13609
139 Ga0400486_19863 3300038742 Bacteria 3458
140 Ga0400486_29126 3300038742 Bacteria 2999
141 Ga0400483_041355 3300039062 Bacteria 27809
142 Ga0400483_059432 3300039062 Bacteria 1754
143 Ga0400483_114547 3300039062 Bacteria 1992
144 Ga0400483_144198 3300039062 Bacteria 6245
145 Ga0400483_149601 3300039062 Bacteria 2080
146 Ga0400483_193896 3300039062 Bacteria 24807
147 Ga0400483_208650 3300039062 Bacteria 13788
148 Ga0400483_219654 3300039062 Bacteria 8944
149 Ga0400483_250943 3300039062 Bacteria 1604
150 Ga0400483_269033 3300039062 Bacteria 1626
151 Ga0400489_17071 3300039093 Bacteria 2006
152 Ga0400489_86593 3300039093 Bacteria 15454
153 Ga0436361_0688947 3300039447 Bacteria 51983
154 Ga0451841_0352743 3300041498 Bacteria 1718
155 Ga0495680_0047999 3300047322 Bacteria 3355
156 Ga0496124_0023652 3300048927 Bacteria 5605
157 Ga0496125_0136420 3300048928 Bacteria 1715
158 Ga0501034_0377150 3300049571 Bacteria 1344
159 Ga0501047_0030845 3300049581 Bacteria 5168
160 Ga0501048_0143763 3300049582 Bacteria 1687
161 Ga0501035_0016980 3300049822 Bacteria 6708
162 Ga0501044_0000213 3300049823 Bacteria 73593
163 nmdc:mga05p37_129562_c1 3300050507 Bacteria 3096
164 nmdc:mga09592_96098_c1 3300050508 Bacteria 2534
165 nmdc:mga0qj67_139817_c1 3300050509 Bacteria 1963
166 nmdc:mga0qj67_96749_c1 3300050509 Bacteria 2377
167 nmdc:mga08y16_346571_c1 3300050511 Bacteria 1526
168 nmdc:mga08y16_455520_c1 3300050511 Bacteria 1304
169 nmdc:mga08y16_94944_c1 3300050511 Bacteria 3107
170 Ga0495619_0039109 3300053085 Bacteria 3096
171 Ga0500650_0000055 3300053098 Bacteria 37349
172 Ga0500564_030350 3300053138 Bacteria 2490
173 Ga0500637_0007089 3300053178 Bacteria 5584
174 2691332782 2690315857 Bacteria 4396207
175 2916181972 2916178963 Bacteria 5265078
176 2919501376 2919497567 Bacteria 4408621
177 2919537909 2919534386 Bacteria 4577686
178 2919691045 2919688452 Bacteria 4595932
179 8001523435 8001522603 Bacteria 4726425
180 Ga0105248_10133668
181 rootH1_10252860
182 Ga0065714_10078772
183 Ga0065704_10157959
184 Ga0070690_100114549
185 Ga0070670_100000019
186 Ga0070670_100198305
187 Ga0070668_100083739
188 Ga0070669_100010809
189 Ga0070671_100000340
190 Ga0070688_100022625
191 Ga0070667_100000020
192 Ga0070714_100028881
193 Ga0070694_100158189
194 Ga0070708_100268744
195 Ga0070662_100004081
196 Ga0070685_10000085
197 Ga0070699_100012084
198 Ga0070696_100000267
199 Ga0070665_100015703
200 Ga0068857_100121407
201 Ga0068854_100076229
202 Ga0068859_100021530
203 Ga0068859_100103592
204 Ga0068859_100135010
205 Ga0068864_100000030
206 Ga0068864_100003003
207 Ga0068861_100002040
208 Ga0068860_100000688
209 Ga0068860_100377971
210 Ga0068860_100438011
211 Ga0068862_100000499
212 Ga0068862_100001386
213 Ga0068862_100111388
214 Ga0068862_100158545
215 Ga0068862_100431445
216 Ga0075428_100059787
217 Ga0097620_100021533
218 Ga0097620_100103584
219 Ga0097620_100135008
220 Ga0079104_1009012
221 Ga0105240_10039424
222 Ga0105240_10075198
223 Ga0111539_10055806
224 Ga0105245_10082373
225 Ga0114129_10002232
226 Ga0105248_10328923
227 Ga0105249_10002336
228 Ga0105249_10039620
229 Ga0157374_10041772
230 Ga0163162_10147853
231 Ga0157375_10090434
232 Ga0157375_10399640
233 Ga0163163_10000125
234 Ga0157380_10520471
235 Ga0213872_10000728
236 Ga0207710_10007404
237 Ga0207680_10043769
238 Ga0207645_10072355
239 Ga0207684_10000128
240 Ga0207707_10010487
241 Ga0207695_10038092
242 Ga0207681_10007990
243 Ga0207681_10092770
244 Ga0207650_10000034
245 Ga0207687_10004606
246 Ga0207687_10077560
247 Ga0207664_10065416
248 Ga0207644_10000706
249 Ga0207706_10031666
250 Ga0207669_10303323
251 Ga0207691_10156628
252 Ga0207711_10029810
253 Ga0207679_10197997
254 Ga0207658_10000015
255 Ga0207641_10005974
256 Ga0207641_10020456
257 Ga0207648_10041106
258 Ga0207676_10000032
259 Ga0207676_10016759
260 Ga0207674_10032063
261 Ga0207675_100004915
262 Ga0207675_100048466
263 Ga0207428_10022412
264 Ga0268265_10000527
265 Ga0268265_10001517
266 Ga0268265_10072593
267 Ga0268265_10089935
268 Ga0268264_10000230
269 Ga0268264_10182788
270 Ga0265327_10000044
271 Ga0307513_10046556
272 Ga0265313_10000113
273 Ga0316575_10008981
274 Ga0316575_10057527
275 Ga0316579_10005077
276 Ga0265314_10020029
277 Ga0316576_10000630
278 Ga0316576_10024579
279 Ga0316576_10032861
280 Ga0316576_10129752
281 Ga0316578_10009868
282 Ga0316578_10084204
283 Ga0316578_10090698
284 Ga0316578_10114265
285 Ga0316578_10154314
286 Ga0307405_10202511
287 Ga0316577_10004919
288 Ga0316577_10103660
289 Ga0316577_10157453
290 Ga0307412_10000226
291 Ga0307412_10043311
292 Ga0307409_100284169
293 Ga0316585_10003449
294 Ga0316580_10004424
295 Ga0373936_0027936
296 Ga0373936_0120653
297 Ga0316574_0007488
298 Ga0316574_0016998
299 Ga0316574_0020591
300 Ga0316574_0089682
301 Ga0316574_0140770
302 Ga0316574_0146590
303 Ga0373937_0300335
304 Ga0316582_0005351
305 Ga0316582_0024752
306 Ga0316582_0115716
307 Ga0316582_0180265
308 Ga0316584_0067525
309 Ga0316584_0076580
310 Ga0316584_0111698
311 Ga0395900_0097848
312 Ga0316581_0000257
313 Ga0400484_33483
314 Ga0400490_48648
315 Ga0400491_22515
316 Ga0400485_18805
317 Ga0400488_36347
318 Ga0400486_19863
319 Ga0400486_29126
320 Ga0400483_041355
321 Ga0400483_059432
322 Ga0400483_114547
323 Ga0400483_144198
324 Ga0400483_149601
325 Ga0400483_193896
326 Ga0400483_208650
327 Ga0400483_219654
328 Ga0400483_250943
329 Ga0400483_269033
330 Ga0400489_17071
331 Ga0400489_86593
332 Ga0436361_0688947
333 Ga0451841_0352743
334 Ga0495680_0047999
335 Ga0496124_0023652
336 Ga0496125_0136420
337 Ga0501034_0377150
338 Ga0501047_0030845
339 Ga0501048_0143763
340 Ga0501035_0016980
341 Ga0501044_0000213
342 nmdc:mga05p37_129562_c1
343 nmdc:mga09592_96098_c1
344 nmdc:mga0qj67_139817_c1
345 nmdc:mga0qj67_96749_c1
346 nmdc:mga08y16_346571_c1
347 nmdc:mga08y16_455520_c1
348 nmdc:mga08y16_94944_c1
349 Ga0495619_0039109
350 Ga0500650_0000055
351 Ga0500564_030350
352 Ga0500637_0007089
353 2691332782
354 2916181972
355 2919501376
356 2919537909
357 2919691045
358 8001523435

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00490

ALAD

Delta-aminolevulinic acid dehydratase

26

347

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w54-assembly1.cif.gz_A stepwise introduction of a zinc binding site into porphobilinogen synthase from pseudomonas aeruginosa (mutation d139c) 0.9816 12 335
1w56-assembly1.cif.gz_B stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d131c) 0.9795 9 335
1w5n-assembly1.cif.gz_B stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations d131c and d139c) 0.9794 9 335
1w5m-assembly1.cif.gz_B stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d139c) 0.979 9 335
1w5o-assembly1.cif.gz_B stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c, d131c and d139c) 0.9788 9 335
ID Description Score Start End Superfamily
2c19A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.971 9 335 3.20.20.70
1i8jA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9551 11 334 3.20.20.70
af_P9WMP5_2_329_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9513 6 333 3.20.20.70
1aw5A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9465 20 335 3.20.20.70
af_Q60178_5_334_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9453 7 332 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A849TES1-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 1.001 242 335 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A2V6T522-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 1.001 243 334 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A1W1D7K8-F1-model_v4 porphobilinogen synthase (EC 4.2.1.24) (Porphobilinogen synthase) 0.9998 233 333 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A3B8K786-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9988 245 334 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A090SE67-F1-model_v4 deleted 0.9982 41 208

Map