F272431

General Info

Members Datasets Scaffolds Average Seq Length
178 122 356 356

Family's Representative Sequence

Representative Sequence 3300042461|Ga0439460_0016141|Ga0439460_0016141_552_1838
Length 428
Sequence VNSRLPIGFANARFIRYLAGLSETVVASPGGPISCGLLSREVKFTTNISALDLIPLKSSARKYLEFGALCVLAIAILWWFGRKLDWVEVRQTLAHADKKLLTIAVAIICSSYLLRAYRWGALLAPLGPARISNLFAATTIGFGAVFLIGRMGEVIRPVMLPLREPRVRASASLVTIMVERIYDMLAVVILFAANLLWFVPPNKVASELSQIRTAGVVMLIVVLSGVAALVWYRWKSAIIVRRIDQILHRWSFIPGRITRAVVSTMEQLARALRVLANVRELAVTIGWTALLWGGVVVANFLVLRAFGLNFGITETIFVLGWSLVGSLVPTPGGAAGAFHAATAAGLIFLGVERETAAAISIVMHIIDFGPSVVFGFFYFVRGDINLARLRSLSSPEAVEHAVEDESITPDDGDGIKLNSQLESASASE

Samples

Sample ID Description Type Environment
1 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
99 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
100 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
101 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
112 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
113 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
114 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
115 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.81
Rhizosphere 96.63
Stem 0
Stem Tuber 0
Unclassified 23.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439460_0016141 3300042461 Unclassified 1986
2 JGI25406J46586_10015588 3300003203 Unclassified 3200
3 rootL2_10279255 3300003322 Unclassified 1864
4 Ga0065704_10117773 3300005289 Unclassified 1828
5 Ga0070690_100109036 3300005330 Bacteria 1845
6 Ga0070680_100005973 3300005336 Bacteria 9236
7 Ga0070682_100003705 3300005337 Bacteria 8494
8 Ga0070689_100000658 3300005340 Bacteria 20862
9 Ga0070692_10002672 3300005345 Bacteria 6983
10 Ga0070692_10033241 3300005345 Unclassified 2598
11 Ga0070668_100042024 3300005347 Bacteria 3503
12 Ga0070669_100244252 3300005353 Bacteria 1427
13 Ga0070673_100012227 3300005364 Bacteria 5887
14 Ga0070705_100016381 3300005440 Bacteria 3851
15 Ga0070700_100013688 3300005441 Bacteria 4561
16 Ga0070694_100002250 3300005444 Bacteria 11408
17 Ga0070694_100012224 3300005444 Bacteria 5333
18 Ga0070681_10000431 3300005458 Bacteria 34072
19 Ga0070681_10011817 3300005458 Bacteria 8655
20 Ga0070681_10067333 3300005458 Unclassified 3549
21 Ga0070707_100028254 3300005468 Bacteria 5337
22 Ga0070698_100020367 3300005471 Bacteria 6951
23 Ga0070698_100030830 3300005471 Bacteria 5560
24 Ga0070699_100004604 3300005518 Bacteria 12200
25 Ga0070699_100070349 3300005518 Bacteria 3042
26 Ga0070679_100005840 3300005530 Bacteria 11420
27 Ga0070679_100016336 3300005530 Bacteria 7155
28 Ga0070697_100085761 3300005536 Unclassified 2598
29 Ga0070697_100156677 3300005536 Unclassified 1923
30 Ga0070686_100029468 3300005544 Bacteria 3340
31 Ga0070696_100045687 3300005546 Bacteria 3034
32 Ga0070693_100003429 3300005547 Bacteria 7396
33 Ga0070693_100073950 3300005547 Unclassified 2014
34 Ga0070693_100107734 3300005547 Bacteria 1708
35 Ga0070704_100114031 3300005549 Bacteria 2062
36 Ga0070664_100042697 3300005564 Bacteria 3827
37 Ga0070664_100137813 3300005564 Unclassified 2147
38 Ga0068857_100158586 3300005577 Bacteria 2052
39 Ga0068857_100359573 3300005577 Bacteria 1349
40 Ga0068852_100130181 3300005616 Bacteria 2316
41 Ga0068859_100099419 3300005617 Unclassified 2964
42 Ga0068864_100009941 3300005618 Bacteria 7848
43 Ga0068864_100061807 3300005618 Bacteria 3244
44 Ga0068864_100087279 3300005618 Bacteria 2746
45 Ga0068866_10076089 3300005718 Unclassified 1789
46 Ga0068861_100025905 3300005719 Bacteria 4259
47 Ga0068851_10059006 3300005834 Bacteria 1962
48 Ga0068863_100073890 3300005841 Unclassified 3225
49 Ga0068858_100076013 3300005842 Unclassified 3120
50 Ga0068860_100028224 3300005843 Bacteria 5402
51 Ga0068860_100072961 3300005843 Unclassified 3262
52 Ga0068860_100124124 3300005843 Unclassified 2475
53 Ga0081539_10000758 3300005985 Bacteria 64093
54 Ga0081539_10001483 3300005985 Bacteria 39785
55 Ga0068871_100002467 3300006358 Bacteria 12633
56 Ga0068871_100079674 3300006358 Bacteria 2710
57 Ga0075433_10072924 3300006852 Unclassified 3019
58 Ga0075433_10093919 3300006852 Bacteria 2654
59 Ga0075433_10136917 3300006852 Bacteria 2177
60 Ga0075434_100045815 3300006871 Unclassified 4339
61 Ga0075436_100005082 3300006914 Bacteria 9058
62 Ga0097620_100031596 3300006931 Bacteria 5317
63 Ga0097620_100099421 3300006931 Unclassified 2964
64 Ga0075435_100023632 3300007076 Bacteria 4757
65 Ga0105240_10012637 3300009093 Bacteria 11641
66 Ga0105240_10126141 3300009093 Unclassified 3076
67 Ga0111539_10022549 3300009094 Bacteria 7734
68 Ga0114129_10002959 3300009147 Bacteria 23767
69 Ga0114129_10010284 3300009147 Bacteria 13353
70 Ga0114129_10026794 3300009147 Bacteria 8162
71 Ga0114129_10034558 3300009147 Bacteria 7142
72 Ga0114129_10046380 3300009147 Bacteria 6107
73 Ga0114129_10734370 3300009147 Bacteria 1266
74 Ga0105243_10003834 3300009148 Bacteria 12022
75 Ga0105243_10032666 3300009148 Bacteria 4023
76 Ga0105241_10160580 3300009174 Bacteria 1847
77 Ga0105241_10212713 3300009174 Viruses 1621
78 Ga0105241_10249422 3300009174 Unclassified 1504
79 Ga0105242_10116552 3300009176 Unclassified 2285
80 Ga0105248_10076352 3300009177 Unclassified 3766
81 Ga0105237_10002702 3300009545 Bacteria 21702
82 Ga0105237_10024285 3300009545 Bacteria 6202
83 Ga0105237_10484708 3300009545 Bacteria 1243
84 Ga0105249_10000018 3300009553 Bacteria 275907
85 Ga0105249_10087849 3300009553 Bacteria 2902
86 Ga0105249_10641780 3300009553 Bacteria 1119
87 Ga0105239_10141546 3300010375 Unclassified 2681
88 Ga0105246_10070244 3300011119 Bacteria 2462
89 Ga0157373_10077349 3300013100 Bacteria 2348
90 Ga0157378_10000176 3300013297 Bacteria 60614
91 Ga0163162_10000001 3300013306 Bacteria 751833
92 Ga0157372_10008136 3300013307 Bacteria 11152
93 Ga0157375_10042339 3300013308 Bacteria 4408
94 Ga0157375_10121790 3300013308 Unclassified 2719
95 Ga0157375_10395233 3300013308 Unclassified 1549
96 Ga0157380_10001796 3300014326 Bacteria 14165
97 Ga0157380_10028655 3300014326 Unclassified 4248
98 Ga0157379_10095664 3300014968 Unclassified 2665
99 Ga0207656_10078565 3300025321 Bacteria 1479
100 Ga0207647_10009918 3300025904 Bacteria 6746
101 Ga0207647_10035426 3300025904 Bacteria 3181
102 Ga0207643_10018845 3300025908 Bacteria 3780
103 Ga0207654_10063259 3300025911 Bacteria 2171
104 Ga0207654_10139531 3300025911 Unclassified 1544
105 Ga0207707_10000004 3300025912 Bacteria 391281
106 Ga0207707_10004798 3300025912 Bacteria 11857
107 Ga0207695_10331213 3300025913 Bacteria 1411
108 Ga0207671_10001988 3300025914 Bacteria 22555
109 Ga0207660_10003641 3300025917 Bacteria 10042
110 Ga0207662_10024961 3300025918 Unclassified 3441
111 Ga0207662_10068411 3300025918 Unclassified 2144
112 Ga0207652_10000302 3300025921 Bacteria 50773
113 Ga0207681_10046331 3300025923 Bacteria 2924
114 Ga0207709_10000844 3300025935 Bacteria 23477
115 Ga0207709_10004813 3300025935 Bacteria 7737
116 Ga0207670_10002289 3300025936 Bacteria 10031
117 Ga0207704_10061198 3300025938 Unclassified 2334
118 Ga0207711_10035497 3300025941 Bacteria 4226
119 Ga0207689_10036000 3300025942 Bacteria 4109
120 Ga0207679_10272115 3300025945 Bacteria 1449
121 Ga0207712_10000081 3300025961 Bacteria 114043
122 Ga0207712_10098015 3300025961 Bacteria 2173
123 Ga0207668_10023909 3300025972 Bacteria 3936
124 Ga0207640_10189302 3300025981 Bacteria 1550
125 Ga0207703_10068851 3300026035 Bacteria 2917
126 Ga0207703_10182606 3300026035 Bacteria 1852
127 Ga0207703_10327305 3300026035 Unclassified 1405
128 Ga0207708_10016283 3300026075 Bacteria 5588
129 Ga0207708_10075893 3300026075 Unclassified 2578
130 Ga0207641_10042824 3300026088 Unclassified 3799
131 Ga0207641_10232146 3300026088 Bacteria 1715
132 Ga0207648_10230022 3300026089 Bacteria 1649
133 Ga0207676_10019972 3300026095 Unclassified 4894
134 Ga0207676_10174599 3300026095 Bacteria 1875
135 Ga0207676_10329249 3300026095 Bacteria 1405
136 Ga0207674_10190396 3300026116 Bacteria 2001
137 Ga0207674_10433574 3300026116 Unclassified 1270
138 Ga0207675_100053386 3300026118 Bacteria 3771
139 Ga0207683_10071371 3300026121 Bacteria 3069
140 Ga0307408_100285979 3300031548 Bacteria 1375
141 Ga0307416_100097182 3300032002 Bacteria 2549
142 Ga0307414_10026014 3300032004 Bacteria 3760
143 Ga0307414_10351181 3300032004 Bacteria 1266
144 Ga0373951_0000827 3300035091 Bacteria 8411
145 Ga0316574_0056565 3300035398 Unclassified 2454
146 Ga0395900_0076114 3300037418 Bacteria 3450
147 Ga0395900_0123144 3300037418 Bacteria 2660
148 Ga0395898_0355822 3300037466 Bacteria 1396
149 Ga0395901_0029241 3300038443 Bacteria 5671
150 Ga0242420_008668 3300038996 Bacteria 1655
151 Ga0439439_0019865 3300041406 Bacteria 1669
152 Ga0439448_0005765 3300042005 Bacteria 3537
153 Ga0439455_0009328 3300042012 Bacteria 2126
154 Ga0439462_0006304 3300042015 Bacteria 2944
155 Ga0439458_0000245 3300042157 Bacteria 13127
156 Ga0496106_0006822 3300048909 Bacteria 8453
157 Ga0496107_0100487 3300048910 Bacteria 2121
158 Ga0496110_0126421 3300048913 Bacteria 2307
159 Ga0496112_0054307 3300048915 Bacteria 3936
160 Ga0496113_0108540 3300048916 Bacteria 2158
161 Ga0501298_004893 3300049521 Bacteria 2131
162 Ga0501038_0008743 3300049574 Bacteria 9291
163 Ga0501198_002124 3300049649 Bacteria 2641
164 Ga0501217_000748 3300049661 Bacteria 5631
165 Ga0501217_001319 3300049661 Bacteria 4614
166 Ga0501223_009242 3300049663 Bacteria 2001
167 Ga0501233_011927 3300049668 Bacteria 1736
168 Ga0501273_000156 3300049770 Bacteria 4754
169 nmdc:mga05p37_30729_c1 3300050507 Bacteria 6554
170 nmdc:mga05p37_5474_c1 3300050507 Bacteria 14908
171 nmdc:mga08y16_261812_c1 3300050511 Unclassified 1786
172 nmdc:mga0n895_126003_c1 3300050512 Unclassified 2585
173 nmdc:mga0n895_161234_c1 3300050512 Bacteria 2274
174 nmdc:mga08x19_3565_c1 3300050514 Bacteria 9266
175 nmdc:mga0a205_63860_c1 3300050515 Unclassified 3556
176 nmdc:mga0a205_6463_c1 3300050515 Bacteria 10595
177 Ga0501084_0133578 3300054114 Bacteria 2089
178 Ga0530510_0096825 3300061734 Bacteria 2157
179 Ga0439460_0016141
180 JGI25406J46586_10015588
181 rootL2_10279255
182 Ga0065704_10117773
183 Ga0070690_100109036
184 Ga0070680_100005973
185 Ga0070682_100003705
186 Ga0070689_100000658
187 Ga0070692_10002672
188 Ga0070692_10033241
189 Ga0070668_100042024
190 Ga0070669_100244252
191 Ga0070673_100012227
192 Ga0070705_100016381
193 Ga0070700_100013688
194 Ga0070694_100002250
195 Ga0070694_100012224
196 Ga0070681_10000431
197 Ga0070681_10011817
198 Ga0070681_10067333
199 Ga0070707_100028254
200 Ga0070698_100020367
201 Ga0070698_100030830
202 Ga0070699_100004604
203 Ga0070699_100070349
204 Ga0070679_100005840
205 Ga0070679_100016336
206 Ga0070697_100085761
207 Ga0070697_100156677
208 Ga0070686_100029468
209 Ga0070696_100045687
210 Ga0070693_100003429
211 Ga0070693_100073950
212 Ga0070693_100107734
213 Ga0070704_100114031
214 Ga0070664_100042697
215 Ga0070664_100137813
216 Ga0068857_100158586
217 Ga0068857_100359573
218 Ga0068852_100130181
219 Ga0068859_100099419
220 Ga0068864_100009941
221 Ga0068864_100061807
222 Ga0068864_100087279
223 Ga0068866_10076089
224 Ga0068861_100025905
225 Ga0068851_10059006
226 Ga0068863_100073890
227 Ga0068858_100076013
228 Ga0068860_100028224
229 Ga0068860_100072961
230 Ga0068860_100124124
231 Ga0081539_10000758
232 Ga0081539_10001483
233 Ga0068871_100002467
234 Ga0068871_100079674
235 Ga0075433_10072924
236 Ga0075433_10093919
237 Ga0075433_10136917
238 Ga0075434_100045815
239 Ga0075436_100005082
240 Ga0097620_100031596
241 Ga0097620_100099421
242 Ga0075435_100023632
243 Ga0105240_10012637
244 Ga0105240_10126141
245 Ga0111539_10022549
246 Ga0114129_10002959
247 Ga0114129_10010284
248 Ga0114129_10026794
249 Ga0114129_10034558
250 Ga0114129_10046380
251 Ga0114129_10734370
252 Ga0105243_10003834
253 Ga0105243_10032666
254 Ga0105241_10160580
255 Ga0105241_10212713
256 Ga0105241_10249422
257 Ga0105242_10116552
258 Ga0105248_10076352
259 Ga0105237_10002702
260 Ga0105237_10024285
261 Ga0105237_10484708
262 Ga0105249_10000018
263 Ga0105249_10087849
264 Ga0105249_10641780
265 Ga0105239_10141546
266 Ga0105246_10070244
267 Ga0157373_10077349
268 Ga0157378_10000176
269 Ga0163162_10000001
270 Ga0157372_10008136
271 Ga0157375_10042339
272 Ga0157375_10121790
273 Ga0157375_10395233
274 Ga0157380_10001796
275 Ga0157380_10028655
276 Ga0157379_10095664
277 Ga0207656_10078565
278 Ga0207647_10009918
279 Ga0207647_10035426
280 Ga0207643_10018845
281 Ga0207654_10063259
282 Ga0207654_10139531
283 Ga0207707_10000004
284 Ga0207707_10004798
285 Ga0207695_10331213
286 Ga0207671_10001988
287 Ga0207660_10003641
288 Ga0207662_10024961
289 Ga0207662_10068411
290 Ga0207652_10000302
291 Ga0207681_10046331
292 Ga0207709_10000844
293 Ga0207709_10004813
294 Ga0207670_10002289
295 Ga0207704_10061198
296 Ga0207711_10035497
297 Ga0207689_10036000
298 Ga0207679_10272115
299 Ga0207712_10000081
300 Ga0207712_10098015
301 Ga0207668_10023909
302 Ga0207640_10189302
303 Ga0207703_10068851
304 Ga0207703_10182606
305 Ga0207703_10327305
306 Ga0207708_10016283
307 Ga0207708_10075893
308 Ga0207641_10042824
309 Ga0207641_10232146
310 Ga0207648_10230022
311 Ga0207676_10019972
312 Ga0207676_10174599
313 Ga0207676_10329249
314 Ga0207674_10190396
315 Ga0207674_10433574
316 Ga0207675_100053386
317 Ga0207683_10071371
318 Ga0307408_100285979
319 Ga0307416_100097182
320 Ga0307414_10026014
321 Ga0307414_10351181
322 Ga0373951_0000827
323 Ga0316574_0056565
324 Ga0395900_0076114
325 Ga0395900_0123144
326 Ga0395898_0355822
327 Ga0395901_0029241
328 Ga0242420_008668
329 Ga0439439_0019865
330 Ga0439448_0005765
331 Ga0439455_0009328
332 Ga0439462_0006304
333 Ga0439458_0000245
334 Ga0496106_0006822
335 Ga0496107_0100487
336 Ga0496110_0126421
337 Ga0496112_0054307
338 Ga0496113_0108540
339 Ga0501298_004893
340 Ga0501038_0008743
341 Ga0501198_002124
342 Ga0501217_000748
343 Ga0501217_001319
344 Ga0501223_009242
345 Ga0501233_011927
346 Ga0501273_000156
347 nmdc:mga05p37_30729_c1
348 nmdc:mga05p37_5474_c1
349 nmdc:mga08y16_261812_c1
350 nmdc:mga0n895_126003_c1
351 nmdc:mga0n895_161234_c1
352 nmdc:mga08x19_3565_c1
353 nmdc:mga0a205_63860_c1
354 nmdc:mga0a205_6463_c1
355 Ga0501084_0133578
356 Ga0530510_0096825

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03706

LPG_synthase_TM

Lysylphosphatidylglycerol synthase TM region

67

375

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7duw-assembly1.cif.gz_B cryo-em structure of the multiple peptide resistance factor (mprf) loaded with two lysyl-phosphatidylglycerol molecules 0.7111 13 337
7f47-assembly1.cif.gz_A cryo-em structure of rhizobium etli mprf 0.6889 13 339
6lvf-assembly1.cif.gz_A cryo-em structure of the multiple peptide resistance factor (mprf) loaded with one lysyl-phosphatidylglycerol molecule 0.6542 14 339
7duw-assembly1.cif.gz_B cryo-em structure of the multiple peptide resistance factor (mprf) loaded with two lysyl-phosphatidylglycerol molecules 0.6138 13 337
7f47-assembly1.cif.gz_A cryo-em structure of rhizobium etli mprf 0.5992 13 339
ID Description Score Start End Superfamily
af_Q55DR2_66_193_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.4095 100 241 1.20.58.70
af_Q55DR2_66_193_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3849 100 241 1.20.58.70
af_Q54HM5_62_190_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3828 100 241 1.20.58.70
af_Q9VW41_5_131_1.20.120.560 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);alix/aip1 in complex with the ypdl late domain 0.3746 126 238 1.20.120.560
af_Q54HM5_62_190_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3575 100 241 1.20.58.70
ID Description Score Start End GO Terms
AF-A0A7Y4X9Z2-F1-model_v4 Flippase-like domain-containing protein 0.9581 8 338 GO:0005886
AF-A0A2V8N5H0-F1-model_v4 Flippase-like domain-containing protein 0.9447 5 342 GO:0005886
AF-A0A7W1FEF0-F1-model_v4 Flippase-like domain-containing protein 0.939 8 340 GO:0005886
AF-A0A7W1AU43-F1-model_v4 Flippase-like domain-containing protein 0.9319 1 343 GO:0005886
AF-A0A7W1AU43-F1-model_v4 Flippase-like domain-containing protein 0.9216 1 343 GO:0005886

Map