F272389

General Info

Members Datasets Scaffolds Average Seq Length
178 79 356 232

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_093940|Ga0400483_093940_102_935
Length 277
Sequence MDAEHFDEENEIISSDSTDDASLPDTLANDTPSDGLDDDLGPLPKLELTSEDLFARFGLDQAADAESEDSAPEPELFEESKEEEEVGGVLPDPFAEGDGLTEVDPRSWFIIHCYSGYEHKVKYNLEQRIESMGMQDFIFQVVVPTVEEIEIKDGKRRTVERCLYPGYIMVQMRLSDDSWYVVRNTPGVTGFVGMGNTPTPLRSEAVQGILRRMEANAPQVRATFKPGQKVRIIEGPFADFIGTVDDIDEERTKVRVLVSFFGRETPVELDFLQVEKA

Samples

Sample ID Description Type Environment
1 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
35 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
36 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
37 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
38 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
39 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
40 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
41 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
46 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
54 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
57 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
65 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
66 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
67 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
68 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
69 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
70 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
71 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
72 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
73 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
77 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
78 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
79 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.26
Metatranscriptomes 6.74
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.88
Stem 0
Stem Tuber 0
Unclassified 6.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400483_093940 3300039062 Bacteria 1502
2 JGI25406J46586_10000367 3300003203 Bacteria 20597
3 Ga0065704_10226575 3300005289 Bacteria 1049
4 Ga0065707_10006372 3300005295 Bacteria 5046
5 Ga0065707_10092154 3300005295 Bacteria 3817
6 Ga0065707_10115339 3300005295 Bacteria 2270
7 Ga0070694_100055848 3300005444 Bacteria 2679
8 Ga0070698_100008324 3300005471 Bacteria 11209
9 Ga0070698_100044974 3300005471 Bacteria 4519
10 Ga0070699_100035302 3300005518 Bacteria 4322
11 Ga0070699_100127764 3300005518 Bacteria 2239
12 Ga0070695_100264745 3300005545 Unclassified 1257
13 Ga0070696_100041162 3300005546 Bacteria 3191
14 Ga0070704_100170264 3300005549 Bacteria 1731
15 Ga0070702_100119296 3300005615 Bacteria 1649
16 Ga0068861_100036368 3300005719 Bacteria 3654
17 Ga0068861_100103177 3300005719 Bacteria 2272
18 Ga0068858_100660827 3300005842 Bacteria 1016
19 Ga0068862_100004463 3300005844 Bacteria 11802
20 Ga0068862_100127802 3300005844 Bacteria 2245
21 Ga0081539_10001957 3300005985 Bacteria 31406
22 Ga0081539_10059233 3300005985 Bacteria 2109
23 Ga0075428_100004514 3300006844 Bacteria 15372
24 Ga0075428_100988870 3300006844 Bacteria 891
25 Ga0075431_100028344 3300006847 Bacteria 5753
26 Ga0075431_100393115 3300006847 Bacteria 1389
27 Ga0075433_10155467 3300006852 Bacteria 2035
28 Ga0075434_100126032 3300006871 Bacteria 2578
29 Ga0075434_100519118 3300006871 Bacteria 1211
30 Ga0075429_100123503 3300006880 Bacteria 2264
31 Ga0075429_100133661 3300006880 Bacteria 2170
32 Ga0111539_10063480 3300009094 Bacteria 4370
33 Ga0114129_10141497 3300009147 Bacteria 3297
34 Ga0114129_10229744 3300009147 Bacteria 2499
35 Ga0114129_10459177 3300009147 Bacteria 1669
36 Ga0105243_10030780 3300009148 Bacteria 4135
37 Ga0105249_10060852 3300009553 Bacteria 3464
38 Ga0207684_10277536 3300025910 Bacteria 1445
39 Ga0207662_10083598 3300025918 Bacteria 1951
40 Ga0207709_10158966 3300025935 Bacteria 1574
41 Ga0207670_10372219 3300025936 Bacteria 1136
42 Ga0207712_10133408 3300025961 Bacteria 1896
43 Ga0207675_100065675 3300026118 Bacteria 3391
44 Ga0209966_1009760 3300027695 Bacteria 1719
45 Ga0265318_10013800 3300028577 Bacteria 3403
46 Ga0265338_10116648 3300028800 Bacteria 2138
47 Ga0265328_10037602 3300031239 Bacteria 1787
48 Ga0265331_10052675 3300031250 Bacteria 1943
49 Ga0316575_10009777 3300031665 Bacteria 3516
50 Ga0316575_10026808 3300031665 Bacteria 2240
51 Ga0316579_10008407 3300031691 Bacteria 4300
52 Ga0316579_10008867 3300031691 Bacteria 4210
53 Ga0316579_10014765 3300031691 Bacteria 3384
54 Ga0316579_10059017 3300031691 Bacteria 1803
55 Ga0316576_10017915 3300031727 Bacteria 4825
56 Ga0316578_10001347 3300031728 Bacteria 9885
57 Ga0316578_10045005 3300031728 Bacteria 2568
58 Ga0307405_10071186 3300031731 Bacteria 2236
59 Ga0316577_10008476 3300031733 Bacteria 5513
60 Ga0316577_10012690 3300031733 Bacteria 4594
61 Ga0316577_10014391 3300031733 Bacteria 4342
62 Ga0316577_10018842 3300031733 Bacteria 3818
63 Ga0316577_10030298 3300031733 Bacteria 3020
64 Ga0316577_10080000 3300031733 Bacteria 1826
65 Ga0316577_10197032 3300031733 Unclassified 1138
66 Ga0316577_10198171 3300031733 Unclassified 1135
67 Ga0307407_10004321 3300031903 Bacteria 6006
68 Ga0307409_100026443 3300031995 Bacteria 4093
69 Ga0307415_100319522 3300032126 Bacteria 1294
70 Ga0316585_10009054 3300032137 Bacteria 2895
71 Ga0316585_10072411 3300032137 Bacteria 1119
72 Ga0316593_10007097 3300032168 Unclassified 3062
73 Ga0316593_10007577 3300032168 Unclassified 2987
74 Ga0316593_10013031 3300032168 Bacteria 2453
75 Ga0316593_10024889 3300032168 Bacteria 1901
76 Ga0316593_10027769 3300032168 Bacteria 1819
77 Ga0316593_10054376 3300032168 Bacteria 1358
78 Ga0316593_10062056 3300032168 Bacteria 1279
79 Ga0316593_10063036 3300032168 Unclassified 1270
80 Ga0316592_1018831 3300033524 Bacteria 1457
81 Ga0316596_1002813 3300033541 Bacteria 3758
82 Ga0316596_1008157 3300033541 Bacteria 2491
83 Ga0316596_1016720 3300033541 Bacteria 1839
84 Ga0373940_0025485 3300035088 Unclassified 1541
85 Ga0316574_0003387 3300035398 Bacteria 8207
86 Ga0316582_0006673 3300036647 Bacteria 6088
87 Ga0316582_0006715 3300036647 Bacteria 6072
88 Ga0316582_0010401 3300036647 Bacteria 5094
89 Ga0316582_0015629 3300036647 Bacteria 4347
90 Ga0316582_0036138 3300036647 Bacteria 3055
91 Ga0316582_0039727 3300036647 Bacteria 2931
92 Ga0316582_0044342 3300036647 Bacteria 2795
93 Ga0316582_0056916 3300036647 Bacteria 2496
94 Ga0316582_0310336 3300036647 Unclassified 1084
95 Ga0316584_0002700 3300036712 Bacteria 11335
96 Ga0316584_0011449 3300036712 Bacteria 6232
97 Ga0316584_0037831 3300036712 Bacteria 3588
98 Ga0316584_0048608 3300036712 Bacteria 3169
99 Ga0316584_0100393 3300036712 Bacteria 2167
100 Ga0316584_0178345 3300036712 Bacteria 1573
101 Ga0316584_0294504 3300036712 Bacteria 1176
102 Ga0316581_0003479 3300037588 Bacteria 3920
103 Ga0316581_0009744 3300037588 Bacteria 2647
104 Ga0316581_0021202 3300037588 Bacteria 1907
105 Ga0316581_0024413 3300037588 Bacteria 1793
106 Ga0316581_0079251 3300037588 Bacteria 1010
107 Ga0400489_78199 3300039093 Bacteria 2993
108 Ga0451577_0016422 3300042876 Bacteria 6858
109 Ga0451577_0046722 3300042876 Bacteria 3873
110 Ga0451577_0073510 3300042876 Bacteria 3050
111 Ga0451577_0146669 3300042876 Bacteria 2122
112 Ga0451577_0218263 3300042876 Bacteria 1723
113 Ga0451577_0508595 3300042876 Unclassified 1094
114 Ga0453683_0002238 3300044673 Bacteria 15295
115 Ga0453683_0029392 3300044673 Bacteria 3475
116 Ga0453683_0177459 3300044673 Bacteria 1350
117 Ga0453683_0215461 3300044673 Bacteria 1220
118 Ga0453683_0241122 3300044673 Bacteria 1151
119 Ga0453683_0396365 3300044673 Unclassified 889
120 Ga0453684_0000095 3300044712 Bacteria 378681
121 Ga0453684_0004574 3300044712 Bacteria 28877
122 Ga0453684_0007412 3300044712 Bacteria 20193
123 Ga0453684_0009456 3300044712 Bacteria 17047
124 Ga0453684_0016312 3300044712 Bacteria 11631
125 Ga0453684_0040080 3300044712 Bacteria 6368
126 Ga0453684_0040272 3300044712 Bacteria 6350
127 Ga0453684_0042774 3300044712 Bacteria 6100
128 Ga0453684_0056281 3300044712 Bacteria 5103
129 Ga0453684_0136380 3300044712 Bacteria 2937
130 Ga0453684_0136489 3300044712 Bacteria 2936
131 Ga0453684_0168954 3300044712 Bacteria 2579
132 Ga0453684_0184458 3300044712 Bacteria 2447
133 Ga0453684_0208059 3300044712 Bacteria 2276
134 Ga0453684_0222013 3300044712 Bacteria 2188
135 Ga0453684_0243717 3300044712 Bacteria 2068
136 Ga0453684_0244698 3300044712 Bacteria 2063
137 Ga0453684_0258597 3300044712 Bacteria 1995
138 Ga0453684_0265491 3300044712 Unclassified 1964
139 Ga0453684_0334890 3300044712 Bacteria 1710
140 Ga0453684_0411527 3300044712 Bacteria 1512
141 Ga0453684_0468984 3300044712 Bacteria 1398
142 Ga0453684_0700989 3300044712 Bacteria 1100
143 Ga0453684_0790828 3300044712 Bacteria 1024
144 Ga0453684_0830418 3300044712 Bacteria 994
145 Ga0453684_1067561 3300044712 Unclassified 855
146 Ga0451576_0011617 3300045051 Bacteria 9977
147 Ga0451576_0079806 3300045051 Bacteria 3405
148 Ga0451576_0092060 3300045051 Bacteria 3154
149 Ga0451576_0101166 3300045051 Bacteria 2997
150 Ga0451576_0298825 3300045051 Bacteria 1683
151 Ga0451576_0341986 3300045051 Bacteria 1566
152 Ga0451576_0623774 3300045051 Bacteria 1133
153 Ga0495630_0133279 3300046517 Bacteria 1887
154 Ga0501298_012192 3300049521 Bacteria 1504
155 Ga0501037_0109761 3300049573 Bacteria 1988
156 Ga0501040_0094358 3300049576 Bacteria 2082
157 Ga0501041_0060371 3300049577 Bacteria 2321
158 Ga0501072_0099059 3300049588 Bacteria 2317
159 Ga0501073_0156102 3300049589 Bacteria 1581
160 Ga0501073_0535720 3300049589 Bacteria 809
161 Ga0501074_0079308 3300049590 Bacteria 2356
162 Ga0501075_0035988 3300049591 Bacteria 3693
163 Ga0501076_0013865 3300049592 Bacteria 6052
164 Ga0501079_0023971 3300049741 Bacteria 4681
165 Ga0501080_0030270 3300049742 Bacteria 5043
166 Ga0501081_0109288 3300049743 Bacteria 1961
167 nmdc:mga05p37_177127_c1 3300050507 Bacteria 2597
168 nmdc:mga05p37_97390_c1 3300050507 Bacteria 3624
169 nmdc:mga09592_107846_c1 3300050508 Bacteria 2389
170 nmdc:mga06r32_10064_c2 3300050510 Bacteria 5832
171 nmdc:mga06r32_419218_c1 3300050510 Bacteria 1320
172 nmdc:mga08y16_678253_c1 3300050511 Bacteria 1032
173 nmdc:mga0n895_217504_c1 3300050512 Bacteria 1940
174 nmdc:mga0a205_474548_c1 3300050515 Bacteria 1109
175 nmdc:mga0a205_56751_c1 3300050515 Bacteria 3781
176 Ga0501084_0013743 3300054114 Bacteria 6700
177 Ga0501084_0312403 3300054114 Bacteria 1327
178 Ga0530510_0138506 3300061734 Bacteria 1792
179 Ga0400483_093940
180 JGI25406J46586_10000367
181 Ga0065704_10226575
182 Ga0065707_10006372
183 Ga0065707_10092154
184 Ga0065707_10115339
185 Ga0070694_100055848
186 Ga0070698_100008324
187 Ga0070698_100044974
188 Ga0070699_100035302
189 Ga0070699_100127764
190 Ga0070695_100264745
191 Ga0070696_100041162
192 Ga0070704_100170264
193 Ga0070702_100119296
194 Ga0068861_100036368
195 Ga0068861_100103177
196 Ga0068858_100660827
197 Ga0068862_100004463
198 Ga0068862_100127802
199 Ga0081539_10001957
200 Ga0081539_10059233
201 Ga0075428_100004514
202 Ga0075428_100988870
203 Ga0075431_100028344
204 Ga0075431_100393115
205 Ga0075433_10155467
206 Ga0075434_100126032
207 Ga0075434_100519118
208 Ga0075429_100123503
209 Ga0075429_100133661
210 Ga0111539_10063480
211 Ga0114129_10141497
212 Ga0114129_10229744
213 Ga0114129_10459177
214 Ga0105243_10030780
215 Ga0105249_10060852
216 Ga0207684_10277536
217 Ga0207662_10083598
218 Ga0207709_10158966
219 Ga0207670_10372219
220 Ga0207712_10133408
221 Ga0207675_100065675
222 Ga0209966_1009760
223 Ga0265318_10013800
224 Ga0265338_10116648
225 Ga0265328_10037602
226 Ga0265331_10052675
227 Ga0316575_10009777
228 Ga0316575_10026808
229 Ga0316579_10008407
230 Ga0316579_10008867
231 Ga0316579_10014765
232 Ga0316579_10059017
233 Ga0316576_10017915
234 Ga0316578_10001347
235 Ga0316578_10045005
236 Ga0307405_10071186
237 Ga0316577_10008476
238 Ga0316577_10012690
239 Ga0316577_10014391
240 Ga0316577_10018842
241 Ga0316577_10030298
242 Ga0316577_10080000
243 Ga0316577_10197032
244 Ga0316577_10198171
245 Ga0307407_10004321
246 Ga0307409_100026443
247 Ga0307415_100319522
248 Ga0316585_10009054
249 Ga0316585_10072411
250 Ga0316593_10007097
251 Ga0316593_10007577
252 Ga0316593_10013031
253 Ga0316593_10024889
254 Ga0316593_10027769
255 Ga0316593_10054376
256 Ga0316593_10062056
257 Ga0316593_10063036
258 Ga0316592_1018831
259 Ga0316596_1002813
260 Ga0316596_1008157
261 Ga0316596_1016720
262 Ga0373940_0025485
263 Ga0316574_0003387
264 Ga0316582_0006673
265 Ga0316582_0006715
266 Ga0316582_0010401
267 Ga0316582_0015629
268 Ga0316582_0036138
269 Ga0316582_0039727
270 Ga0316582_0044342
271 Ga0316582_0056916
272 Ga0316582_0310336
273 Ga0316584_0002700
274 Ga0316584_0011449
275 Ga0316584_0037831
276 Ga0316584_0048608
277 Ga0316584_0100393
278 Ga0316584_0178345
279 Ga0316584_0294504
280 Ga0316581_0003479
281 Ga0316581_0009744
282 Ga0316581_0021202
283 Ga0316581_0024413
284 Ga0316581_0079251
285 Ga0400489_78199
286 Ga0451577_0016422
287 Ga0451577_0046722
288 Ga0451577_0073510
289 Ga0451577_0146669
290 Ga0451577_0218263
291 Ga0451577_0508595
292 Ga0453683_0002238
293 Ga0453683_0029392
294 Ga0453683_0177459
295 Ga0453683_0215461
296 Ga0453683_0241122
297 Ga0453683_0396365
298 Ga0453684_0000095
299 Ga0453684_0004574
300 Ga0453684_0007412
301 Ga0453684_0009456
302 Ga0453684_0016312
303 Ga0453684_0040080
304 Ga0453684_0040272
305 Ga0453684_0042774
306 Ga0453684_0056281
307 Ga0453684_0136380
308 Ga0453684_0136489
309 Ga0453684_0168954
310 Ga0453684_0184458
311 Ga0453684_0208059
312 Ga0453684_0222013
313 Ga0453684_0243717
314 Ga0453684_0244698
315 Ga0453684_0258597
316 Ga0453684_0265491
317 Ga0453684_0334890
318 Ga0453684_0411527
319 Ga0453684_0468984
320 Ga0453684_0700989
321 Ga0453684_0790828
322 Ga0453684_0830418
323 Ga0453684_1067561
324 Ga0451576_0011617
325 Ga0451576_0079806
326 Ga0451576_0092060
327 Ga0451576_0101166
328 Ga0451576_0298825
329 Ga0451576_0341986
330 Ga0451576_0623774
331 Ga0495630_0133279
332 Ga0501298_012192
333 Ga0501037_0109761
334 Ga0501040_0094358
335 Ga0501041_0060371
336 Ga0501072_0099059
337 Ga0501073_0156102
338 Ga0501073_0535720
339 Ga0501074_0079308
340 Ga0501075_0035988
341 Ga0501076_0013865
342 Ga0501079_0023971
343 Ga0501080_0030270
344 Ga0501081_0109288
345 nmdc:mga05p37_177127_c1
346 nmdc:mga05p37_97390_c1
347 nmdc:mga09592_107846_c1
348 nmdc:mga06r32_10064_c2
349 nmdc:mga06r32_419218_c1
350 nmdc:mga08y16_678253_c1
351 nmdc:mga0n895_217504_c1
352 nmdc:mga0a205_474548_c1
353 nmdc:mga0a205_56751_c1
354 Ga0501084_0013743
355 Ga0501084_0312403
356 Ga0530510_0138506

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00467

KOW

KOW motif

226

259

0.96

PF02357

NusG

Transcription termination factor nusG

106

210

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c6u-assembly1.cif.gz_N cryoem structure of e.coli rna polymerase elongation complex bound with nusg 0.9303 56 164
8exy-assembly1.cif.gz_G m. tuberculosis rnap paused complex with b. subtilis nusg and gmpcpp 0.9299 57 162
5xog-assembly1.cif.gz_W rna polymerase ii elongation complex bound with spt5 kow5 and elf1 0.9205 176 220
2kvq-assembly1.cif.gz_G solution structure of nuse:nusg-ctd complex 0.9146 171 227
6z9r-assembly1.cif.gz_G transcription termination intermediate complex 3 0.9056 57 164
ID Description Score Start End Superfamily
af_Q94AA3_277_328_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9841 174 224 2.30.30.30
af_Q10BA7_272_328_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9689 173 227 2.30.30.30
af_P9WIU9_43_152_3.30.70.940 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;NusG, N-terminal domain 0.9583 53 160 3.30.70.940
2xhcA03 Mainly Beta;Roll;SH3 type barrels.; 0.9533 172 227 2.30.30.30
af_Q94AA3_277_328_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9479 174 224 2.30.30.30
ID Description Score Start End GO Terms
AF-A0A2K3NG39-F1-model_v4 Transcription antitermination 0.9814 173 227 GO:0031564
AF-A0A3R7WK22-F1-model_v4 deleted 0.9793 174 227
AF-A0A645IKT9-F1-model_v4 Transcription termination/antitermination protein NusG 0.978 173 227 GO:0005829
GO:0006353
GO:0031564
GO:0032784
AF-A0A3D5P868-F1-model_v4 Transcription termination/antitermination protein NusG 0.9755 171 227 GO:0031564
GO:0032784
AF-A0A3D5CEE0-F1-model_v4 Transcription termination/antitermination protein NusG 0.9723 172 227 GO:0005829
GO:0006353
GO:0031564
GO:0032784

Map