F271973

General Info

Members Datasets Scaffolds Average Seq Length
178 136 356 511

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10034113|Ga0105237_100341132
Length 527
Sequence MTASAAKPRLDSYGDKPALIMGGSGEVVTFAQLDARSKQVAQLLHGTGIRRGDHIAIVMENNARFLEIAWAAQRSGLYYTPVNWHLSPAEASYIVKDCGAKALFTSANVGALTHGLGSDSDAKVRLSIGGNVSGFDSYERAIEAYPARALDEETEGAAMCYSSGTTGKPKGILRPSSYAPFGEGTFAERTLATEYPFSERTVYLSPGPLYHAAPIYWSMATQRFGGTAVIMEKYDPALTLQLIERYRVTMAQFVPTMFVRMLKLPPDERTRHDLSSLKFAIHAAAPCPIWVKEKMLEWWGPIIHEYLGSSEGGMVAIGPEEWMKHKGSVGKPRQITVHILDKDGKELPRGEAGVIYYEGNARFEYHRDPAKSAEAFDHHGWTTVGDIGYLDDDGYLYLSDRKAHMIISGGVNIYPQEVENVLVEHPKVADAAVIGVPNEEFGEEVKAVVQLAASVVAEPALEQELIAYCRERIALQMSALRRFRRRIAAHGERQIIEEADQGSLLERPPQSHHLMRPQASQRKCSEN

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
56 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
57 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
58 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
77 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
81 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
82 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
83 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
84 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
85 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
98 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
99 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
100 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
118 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
119 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
128 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
129 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
130 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
131 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
132 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
133 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
134 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
135 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
136 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.51
Metatranscriptomes 0
Isolates 4.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.69
Nodule 0
Rhizoplane 9.55
Rhizosphere 76.4
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10034113 3300009545 Bacteria 5155
2 Ga0055540_1000020 3300003792 Bacteria 210282
3 Ga0070668_100001497 3300005347 Bacteria 16878
4 Ga0070668_100042736 3300005347 Bacteria 3474
5 Ga0070671_100092140 3300005355 Bacteria 2539
6 Ga0070667_100000266 3300005367 Bacteria 59196
7 Ga0070709_10026962 3300005434 Bacteria 3411
8 Ga0070714_100001651 3300005435 Bacteria 16229
9 Ga0070714_100031613 3300005435 Bacteria 4418
10 Ga0070713_100027975 3300005436 Bacteria 4446
11 Ga0070713_100058791 3300005436 Bacteria 3208
12 Ga0070710_10006324 3300005437 Bacteria 5682
13 Ga0070708_100023644 3300005445 Bacteria 5228
14 Ga0070706_100029479 3300005467 Bacteria 5055
15 Ga0070707_100019778 3300005468 Bacteria 6346
16 Ga0070698_100000052 3300005471 Bacteria 82128
17 Ga0070698_100013335 3300005471 Bacteria 8700
18 Ga0070679_100045338 3300005530 Bacteria 4381
19 Ga0070672_100073960 3300005543 Bacteria 2717
20 Ga0068855_100003469 3300005563 Bacteria 19302
21 Ga0068856_100029306 3300005614 Bacteria 5377
22 Ga0068859_100014534 3300005617 Bacteria 7906
23 Ga0068861_100135708 3300005719 Bacteria 2002
24 Ga0068863_100182050 3300005841 Bacteria 2017
25 Ga0068858_100026966 3300005842 Bacteria 5336
26 Ga0068858_100079924 3300005842 Bacteria 3038
27 Ga0068860_100000027 3300005843 Bacteria 267207
28 Ga0068860_100017737 3300005843 Bacteria 6934
29 Ga0068862_100003145 3300005844 Bacteria 14350
30 Ga0081455_10085136 3300005937 Bacteria 2578
31 Ga0070715_10015604 3300006163 Bacteria 2837
32 Ga0070716_100009701 3300006173 Bacteria 4804
33 Ga0075428_100079712 3300006844 Bacteria 3574
34 Ga0075428_100138955 3300006844 Bacteria 2641
35 Ga0097620_100014535 3300006931 Bacteria 7906
36 Ga0111539_10074966 3300009094 Bacteria 3987
37 Ga0111539_10136291 3300009094 Bacteria 2875
38 Ga0105245_10243422 3300009098 Bacteria 1744
39 Ga0114129_10082313 3300009147 Bacteria 4473
40 Ga0114129_10203650 3300009147 Bacteria 2679
41 Ga0114129_10261660 3300009147 Bacteria 2318
42 Ga0105237_10007068 3300009545 Bacteria 12342
43 Ga0105237_10196147 3300009545 Bacteria 2019
44 Ga0105238_10009923 3300009551 Bacteria 9546
45 Ga0105239_10062678 3300010375 Bacteria 4081
46 Ga0105239_10138223 3300010375 Bacteria 2713
47 Ga0105239_10160927 3300010375 Bacteria 2508
48 Ga0157369_10000276 3300013105 Bacteria 69197
49 Ga0157378_10030567 3300013297 Bacteria 4760
50 Ga0157378_10043808 3300013297 Bacteria 3973
51 Ga0209051_1000072 3300025303 Bacteria 210334
52 Ga0207642_10034336 3300025899 Bacteria 2156
53 Ga0207684_10024414 3300025910 Bacteria 5154
54 Ga0207671_10095663 3300025914 Bacteria 2243
55 Ga0207693_10071418 3300025915 Bacteria 2717
56 Ga0207694_10014258 3300025924 Bacteria 5994
57 Ga0207700_10061799 3300025928 Bacteria 2842
58 Ga0207664_10006236 3300025929 Bacteria 8190
59 Ga0207709_10126815 3300025935 Bacteria 1733
60 Ga0207665_10018159 3300025939 Bacteria 4622
61 Ga0207691_10075516 3300025940 Bacteria 3039
62 Ga0207689_10041427 3300025942 Bacteria 3811
63 Ga0207667_10015660 3300025949 Bacteria 8602
64 Ga0207668_10001936 3300025972 Bacteria 12125
65 Ga0207668_10004352 3300025972 Bacteria 8317
66 Ga0207668_10016188 3300025972 Bacteria 4648
67 Ga0207658_10000206 3300025986 Bacteria 61427
68 Ga0207641_10179012 3300026088 Bacteria 1941
69 Ga0207675_100009142 3300026118 Bacteria 9294
70 Ga0268265_10001820 3300028380 Bacteria 17038
71 Ga0268265_10011414 3300028380 Bacteria 6007
72 Ga0268264_10000014 3300028381 Bacteria 509962
73 Ga0268264_10027612 3300028381 Bacteria 4640
74 Ga0265326_10001902 3300028558 Bacteria 7153
75 Ga0265319_1000649 3300028563 Bacteria 22941
76 Ga0265334_10000161 3300028573 Bacteria 41629
77 Ga0307517_10001491 3300028786 Bacteria 39111
78 Ga0307517_10023769 3300028786 Bacteria 7596
79 Ga0265338_10004651 3300028800 Bacteria 18438
80 Ga0265338_10009635 3300028800 Bacteria 11466
81 Ga0265338_10014177 3300028800 Bacteria 8905
82 Ga0265332_10000567 3300031238 Bacteria 24676
83 Ga0265332_10002403 3300031238 Bacteria 9548
84 Ga0265320_10002212 3300031240 Bacteria 13664
85 Ga0265325_10006364 3300031241 Bacteria 7172
86 Ga0265340_10000289 3300031247 Bacteria 26456
87 Ga0265339_10000280 3300031249 Bacteria 41086
88 Ga0265339_10015217 3300031249 Bacteria 4619
89 Ga0265331_10002208 3300031250 Bacteria 13369
90 Ga0265327_10000014 3300031251 Bacteria 506288
91 Ga0265327_10000552 3300031251 Bacteria 64037
92 Ga0265316_10043662 3300031344 Bacteria 3570
93 Ga0307513_10003652 3300031456 Bacteria 20822
94 Ga0265313_10014736 3300031595 Bacteria 4600
95 Ga0265314_10002106 3300031711 Bacteria 20917
96 Ga0265314_10010810 3300031711 Bacteria 7589
97 Ga0307416_100078301 3300032002 Bacteria 2781
98 Ga0373949_0002494 3300035090 Bacteria 4710
99 Ga0373931_0066122 3300035691 Bacteria 1961
100 Ga0373925_0000122 3300037068 Bacteria 83921
101 Ga0373925_0000593 3300037068 Bacteria 34861
102 Ga0395901_0004240 3300038443 Bacteria 14461
103 Ga0439448_0010802 3300042005 Bacteria 2713
104 Ga0439463_020018 3300042016 Bacteria 1668
105 Ga0466963_0001582 3300044694 Bacteria 12360
106 Ga0466968_0024805 3300044735 Bacteria 2453
107 Ga0495664_0019621 3300046477 Bacteria 3890
108 Ga0495608_0087439 3300046511 Bacteria 2019
109 Ga0495668_0029446 3300046616 Bacteria 3102
110 Ga0495599_0050115 3300046678 Bacteria 2617
111 Ga0495581_0025568 3300047315 Bacteria 3424
112 Ga0496100_0000346 3300048903 Bacteria 22639
113 Ga0496100_0156443 3300048903 Bacteria 1630
114 Ga0496101_0000027 3300048904 Bacteria 199664
115 Ga0496102_0002252 3300048905 Bacteria 16523
116 Ga0496103_0000226 3300048906 Bacteria 54762
117 Ga0496105_0046151 3300048908 Bacteria 3596
118 Ga0496106_0003968 3300048909 Bacteria 11055
119 Ga0496108_0000485 3300048911 Bacteria 31895
120 Ga0496109_0000090 3300048912 Bacteria 94097
121 Ga0496110_0015351 3300048913 Bacteria 6372
122 Ga0496110_0026419 3300048913 Bacteria 4969
123 Ga0496110_0134195 3300048913 Bacteria 2236
124 Ga0496111_0009858 3300048914 Bacteria 6386
125 Ga0496111_0021798 3300048914 Bacteria 4476
126 Ga0496114_0000997 3300048917 Bacteria 21189
127 Ga0496115_0008368 3300048918 Bacteria 7655
128 Ga0496115_0041758 3300048918 Bacteria 3652
129 Ga0496116_0001687 3300048919 Bacteria 24198
130 Ga0496116_0024049 3300048919 Bacteria 4516
131 Ga0496117_0015696 3300048920 Bacteria 6433
132 Ga0496119_0000334 3300048922 Bacteria 65883
133 Ga0496119_0001679 3300048922 Bacteria 25859
134 Ga0496119_0043502 3300048922 Bacteria 2836
135 Ga0496120_0000481 3300048923 Bacteria 62579
136 Ga0496121_0000004 3300048924 Bacteria 1139011
137 Ga0496121_0065966 3300048924 Bacteria 2942
138 Ga0496123_0010121 3300048926 Bacteria 8384
139 Ga0496124_0000030 3300048927 Bacteria 351350
140 Ga0496124_0019681 3300048927 Bacteria 6270
141 Ga0496125_0000003 3300048928 Bacteria 1189767
142 Ga0496126_0000001 3300048929 Bacteria 1139011
143 Ga0501031_0069085 3300049568 Bacteria 2301
144 Ga0501034_0000447 3300049571 Bacteria 68166
145 Ga0501034_0003957 3300049571 Bacteria 16648
146 Ga0501036_0003173 3300049572 Bacteria 13122
147 Ga0501037_0025539 3300049573 Bacteria 4364
148 Ga0501039_0082101 3300049575 Bacteria 2509
149 Ga0501042_0018352 3300049578 Bacteria 4841
150 Ga0501043_0030242 3300049579 Bacteria 4255
151 Ga0501047_0078626 3300049581 Bacteria 3172
152 Ga0501067_0039869 3300049583 Bacteria 2608
153 Ga0501071_0065521 3300049587 Bacteria 2638
154 Ga0501072_0061915 3300049588 Bacteria 2952
155 Ga0501198_000933 3300049649 Bacteria 3686
156 Ga0501249_000127 3300049679 Bacteria 23708
157 Ga0501257_005848 3300049686 Bacteria 2719
158 Ga0501035_0088229 3300049822 Bacteria 2733
159 Ga0501044_0001025 3300049823 Bacteria 33664
160 Ga0501044_0057985 3300049823 Bacteria 3972
161 nmdc:mga05p37_186074_c1 3300050507 Bacteria 2525
162 nmdc:mga05p37_54808_c1 3300050507 Bacteria 4905
163 nmdc:mga05p37_64625_c1 3300050507 Bacteria 4503
164 nmdc:mga09592_102993_c1 3300050508 Bacteria 2445
165 nmdc:mga09592_34804_c1 3300050508 Bacteria 4212
166 nmdc:mga06r32_47500_c1 3300050510 Bacteria 4101
167 nmdc:mga08y16_79363_c1 3300050511 Bacteria 3421
168 Ga0495601_0053015 3300053077 Bacteria 2563
169 Ga0500610_0000152 3300053079 Bacteria 20704
170 Ga0495619_0082720 3300053085 Bacteria 2164
171 2738664944 2738541264 Bacteria 5935393
172 2739144078 2738541356 Bacteria 5935017
173 2884697865 2884693830 Bacteria 11273186
174 2895444966 2895442618 Bacteria 11027144
175 2915359910 2915358134 Bacteria 6050864
176 2919720265 2919713450 Bacteria 7431245
177 2939582979 2939582691 Bacteria 7088898
178 2939634899 2939631187 Bacteria 6118131
179 Ga0105237_10034113
180 Ga0055540_1000020
181 Ga0070668_100001497
182 Ga0070668_100042736
183 Ga0070671_100092140
184 Ga0070667_100000266
185 Ga0070709_10026962
186 Ga0070714_100001651
187 Ga0070714_100031613
188 Ga0070713_100027975
189 Ga0070713_100058791
190 Ga0070710_10006324
191 Ga0070708_100023644
192 Ga0070706_100029479
193 Ga0070707_100019778
194 Ga0070698_100000052
195 Ga0070698_100013335
196 Ga0070679_100045338
197 Ga0070672_100073960
198 Ga0068855_100003469
199 Ga0068856_100029306
200 Ga0068859_100014534
201 Ga0068861_100135708
202 Ga0068863_100182050
203 Ga0068858_100026966
204 Ga0068858_100079924
205 Ga0068860_100000027
206 Ga0068860_100017737
207 Ga0068862_100003145
208 Ga0081455_10085136
209 Ga0070715_10015604
210 Ga0070716_100009701
211 Ga0075428_100079712
212 Ga0075428_100138955
213 Ga0097620_100014535
214 Ga0111539_10074966
215 Ga0111539_10136291
216 Ga0105245_10243422
217 Ga0114129_10082313
218 Ga0114129_10203650
219 Ga0114129_10261660
220 Ga0105237_10007068
221 Ga0105237_10196147
222 Ga0105238_10009923
223 Ga0105239_10062678
224 Ga0105239_10138223
225 Ga0105239_10160927
226 Ga0157369_10000276
227 Ga0157378_10030567
228 Ga0157378_10043808
229 Ga0209051_1000072
230 Ga0207642_10034336
231 Ga0207684_10024414
232 Ga0207671_10095663
233 Ga0207693_10071418
234 Ga0207694_10014258
235 Ga0207700_10061799
236 Ga0207664_10006236
237 Ga0207709_10126815
238 Ga0207665_10018159
239 Ga0207691_10075516
240 Ga0207689_10041427
241 Ga0207667_10015660
242 Ga0207668_10001936
243 Ga0207668_10004352
244 Ga0207668_10016188
245 Ga0207658_10000206
246 Ga0207641_10179012
247 Ga0207675_100009142
248 Ga0268265_10001820
249 Ga0268265_10011414
250 Ga0268264_10000014
251 Ga0268264_10027612
252 Ga0265326_10001902
253 Ga0265319_1000649
254 Ga0265334_10000161
255 Ga0307517_10001491
256 Ga0307517_10023769
257 Ga0265338_10004651
258 Ga0265338_10009635
259 Ga0265338_10014177
260 Ga0265332_10000567
261 Ga0265332_10002403
262 Ga0265320_10002212
263 Ga0265325_10006364
264 Ga0265340_10000289
265 Ga0265339_10000280
266 Ga0265339_10015217
267 Ga0265331_10002208
268 Ga0265327_10000014
269 Ga0265327_10000552
270 Ga0265316_10043662
271 Ga0307513_10003652
272 Ga0265313_10014736
273 Ga0265314_10002106
274 Ga0265314_10010810
275 Ga0307416_100078301
276 Ga0373949_0002494
277 Ga0373931_0066122
278 Ga0373925_0000122
279 Ga0373925_0000593
280 Ga0395901_0004240
281 Ga0439448_0010802
282 Ga0439463_020018
283 Ga0466963_0001582
284 Ga0466968_0024805
285 Ga0495664_0019621
286 Ga0495608_0087439
287 Ga0495668_0029446
288 Ga0495599_0050115
289 Ga0495581_0025568
290 Ga0496100_0000346
291 Ga0496100_0156443
292 Ga0496101_0000027
293 Ga0496102_0002252
294 Ga0496103_0000226
295 Ga0496105_0046151
296 Ga0496106_0003968
297 Ga0496108_0000485
298 Ga0496109_0000090
299 Ga0496110_0015351
300 Ga0496110_0026419
301 Ga0496110_0134195
302 Ga0496111_0009858
303 Ga0496111_0021798
304 Ga0496114_0000997
305 Ga0496115_0008368
306 Ga0496115_0041758
307 Ga0496116_0001687
308 Ga0496116_0024049
309 Ga0496117_0015696
310 Ga0496119_0000334
311 Ga0496119_0001679
312 Ga0496119_0043502
313 Ga0496120_0000481
314 Ga0496121_0000004
315 Ga0496121_0065966
316 Ga0496123_0010121
317 Ga0496124_0000030
318 Ga0496124_0019681
319 Ga0496125_0000003
320 Ga0496126_0000001
321 Ga0501031_0069085
322 Ga0501034_0000447
323 Ga0501034_0003957
324 Ga0501036_0003173
325 Ga0501037_0025539
326 Ga0501039_0082101
327 Ga0501042_0018352
328 Ga0501043_0030242
329 Ga0501047_0078626
330 Ga0501067_0039869
331 Ga0501071_0065521
332 Ga0501072_0061915
333 Ga0501198_000933
334 Ga0501249_000127
335 Ga0501257_005848
336 Ga0501035_0088229
337 Ga0501044_0001025
338 Ga0501044_0057985
339 nmdc:mga05p37_186074_c1
340 nmdc:mga05p37_54808_c1
341 nmdc:mga05p37_64625_c1
342 nmdc:mga09592_102993_c1
343 nmdc:mga09592_34804_c1
344 nmdc:mga06r32_47500_c1
345 nmdc:mga08y16_79363_c1
346 Ga0495601_0053015
347 Ga0500610_0000152
348 Ga0495619_0082720
349 2738664944
350 2739144078
351 2884697865
352 2895444966
353 2915359910
354 2919720265
355 2939582979
356 2939634899

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

417

486

0.89

PF00501

AMP-binding

AMP-binding enzyme

7

364

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p2q-assembly1.cif.gz_A acetyl-coa synthetase, r584e mutation 0.9019 2 505
5jrh-assembly2.cif.gz_B crystal structure of salmonella enterica acetyl-coa synthetase (acs) in complex with camp and coenzyme a 0.9004 2 504
4u5y-assembly1.cif.gz_D crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.8983 413 507
2p2m-assembly1.cif.gz_A acetyl-coa synthetase, r194a mutation 0.8958 2 499
2p2b-assembly2.cif.gz_B acetyl-coa synthetase, v386a mutation 0.8938 2 499
ID Description Score Start End Superfamily
af_P96396_28_429_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9881 2 397 3.40.50.12780
af_O16481_410_514_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9717 402 504 3.30.300.30
af_P96396_28_429_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.971 2 397 3.40.50.12780
af_P96396_433_536_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9707 401 503 3.30.300.30
af_P96396_433_536_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9525 401 503 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7G8PGC3-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9631 422 508 GO:0016878
GO:0044550
AF-A0A7G8PGC3-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9524 422 508 GO:0016878
GO:0044550
AF-A0A382HY39-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9388 29 308 GO:0016405
AF-A0A382HY39-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9191 29 308 GO:0016405
AF-A0A656TGP1-F1-model_v4 deleted 0.9166 13 155

Map