F271644
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 131 | 157 | 407 |
Family's Representative Sequence
| Representative Sequence | 3300005536|Ga0070697_100000895|Ga0070697_10000089521 |
| Length | 460 |
| Sequence | MRQVYRPGAPLHSCRSPATPSPHTKMASPHTLTVTSCTEWRGETVPSDATPDPYADPLVFGQRLQILRTRKGLTRDQLGGLAGRSGSWVKGIETGRLKTPRLEVILRLAEILRVRDLSDLTGDQSVHVDLFTGPGHPRLPEVKAAVDAFPLTARREAPPAAHLRARLARAWTARHSAPNHREVIGELLPGLIRDAQAAVRQADTSSDRRTAHAVLAEVYSLAQFFCAYQPDPALLWRVADRGLIAAQESEDPHAIGIAAWLAAQAHRDSGPTHFDAADAVNLETLAFLEPLLPDADDDVLAVTGALTFEAGYTAARRGETGTAWRYWDQARGMADRLPADYYHPVTSFSRAIMGAHAVTIAVELHQGGESVRQAAAADAVTIPSRPRRARHRIEEARGYQLDGQPDVALATLNQAHEAAPETIRYNGYAKRIVLEETEAKSPARRRRASELAVKLGLLAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2527291627 | Frankia casuarinae Thr | Isolate | Nodule |
| 2 | 2546825537 | Frankia sp. CcI6 | Isolate | Rhizoplane |
| 3 | 2684623036 | Frankia sp. CgIM4 | Isolate | Nodule |
| 4 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 5 | 2773857924 | Frankia sp. CgIS1 | Isolate | Nodule |
| 6 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 7 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 8 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 9 | 2867346516 | Streptomyces radicis AZ1-7 | Isolate | Unclassified |
| 10 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 11 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 12 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 13 | 2990059506 | Streptomyces sp. CAP261 | Isolate | Unclassified |
| 14 | 2995463766 | Streptacidiphilus fuscans NEAU-YB345 | Isolate | Unclassified |
| 15 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 16 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 17 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 18 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 19 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 20 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 28 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009979 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG | Metagenome | Rhizosphere |
| 31 | 3300009987 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG | Metagenome | Rhizosphere |
| 32 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 33 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 34 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 35 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 44 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 45 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 46 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 47 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 48 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 49 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 50 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 51 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 52 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 53 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 54 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 55 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 56 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 57 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 58 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 59 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 60 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 61 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 62 | 3300042011 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 | Metagenome | Rhizosphere |
| 63 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 64 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 65 | 3300042115 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 | Metagenome | Rhizosphere |
| 66 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 67 | 3300042124 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 | Metagenome | Rhizosphere |
| 68 | 3300042128 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 | Metagenome | Rhizosphere |
| 69 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 70 | 3300042132 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 | Metagenome | Rhizosphere |
| 71 | 3300042133 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 | Metagenome | Rhizosphere |
| 72 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 73 | 3300042135 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 | Metagenome | Rhizosphere |
| 74 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 75 | 3300042146 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 | Metagenome | Rhizosphere |
| 76 | 3300042147 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 | Metagenome | Rhizosphere |
| 77 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 78 | 3300042184 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 | Metagenome | Rhizosphere |
| 79 | 3300042185 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 | Metagenome | Rhizosphere |
| 80 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 81 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 82 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 83 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 107 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 108 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 109 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 123 | 3300059423 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 124 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 125 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 126 | 637000116 | Frankia casuarinae CcI3 | Isolate | Nodule |
| 127 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 128 | 8033684223 | Streptomyces phytophilus PIP175 | Isolate | Unclassified |
| 129 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 130 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
| 131 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.2 |
| Metatranscriptomes | 0 |
| Isolates | 11.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.37 |
| Nodule | 2.25 |
| Rhizoplane | 1.12 |
| Rhizosphere | 80.34 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.92 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10030459 | 3300003320 | Bacteria | 3689 |
| 2 | rootL2_10111909 | 3300003322 | Bacteria | 3020 |
| 3 | rootL2_10111910 | 3300003322 | Bacteria | 2675 |
| 4 | rootH1_10065249 | 3300003323 | Bacteria | 2643 |
| 5 | JGI25160J50197_1002169 | 3300003354 | Bacteria | 9276 |
| 6 | JGI25160J50197_1008074 | 3300003354 | Bacteria | 4044 |
| 7 | Ga0070680_100032516 | 3300005336 | Bacteria | 4200 |
| 8 | Ga0070668_100000476 | 3300005347 | Bacteria | 26561 |
| 9 | Ga0070681_10202367 | 3300005458 | Bacteria | 1903 |
| 10 | Ga0070681_10284088 | 3300005458 | Bacteria | 1565 |
| 11 | Ga0070697_100000895 | 3300005536 | Bacteria | 22412 |
| 12 | Ga0068857_100019726 | 3300005577 | Bacteria | 5922 |
| 13 | Ga0068856_100058319 | 3300005614 | Bacteria | 3813 |
| 14 | Ga0068863_100005378 | 3300005841 | Bacteria | 12627 |
| 15 | Ga0068862_100036281 | 3300005844 | Bacteria | 4179 |
| 16 | Ga0105251_10029421 | 3300009011 | Bacteria | 2767 |
| 17 | Ga0105248_10001461 | 3300009177 | Bacteria | 26336 |
| 18 | Ga0105032_101674 | 3300009979 | Bacteria | 2009 |
| 19 | Ga0105030_100005 | 3300009987 | Bacteria | 23752 |
| 20 | Ga0182008_10005428 | 3300014497 | Bacteria | 7259 |
| 21 | Ga0182007_10015763 | 3300015262 | Bacteria | 2807 |
| 22 | Ga0182005_1022569 | 3300015265 | Bacteria | 1724 |
| 23 | Ga0207426_1004251 | 3300025302 | Bacteria | 7107 |
| 24 | Ga0207426_1004824 | 3300025302 | Bacteria | 6400 |
| 25 | Ga0207426_1007718 | 3300025302 | Bacteria | 4463 |
| 26 | Ga0207707_10242823 | 3300025912 | Bacteria | 1565 |
| 27 | Ga0207652_10136105 | 3300025921 | Bacteria | 2194 |
| 28 | Ga0207711_10001072 | 3300025941 | Bacteria | 26110 |
| 29 | Ga0207668_10039078 | 3300025972 | Bacteria | 3190 |
| 30 | Ga0207702_10028906 | 3300026078 | Bacteria | 4610 |
| 31 | Ga0207674_10163590 | 3300026116 | Bacteria | 2179 |
| 32 | Ga0268265_10073651 | 3300028380 | Bacteria | 2668 |
| 33 | Ga0307515_10128753 | 3300028794 | Bacteria | 2805 |
| 34 | Ga0307512_10014841 | 3300030522 | Bacteria | 7247 |
| 35 | Ga0307513_10052290 | 3300031456 | Bacteria | 4399 |
| 36 | Ga0307408_100034144 | 3300031548 | Bacteria | 3560 |
| 37 | Ga0307508_10012992 | 3300031616 | Bacteria | 7614 |
| 38 | Ga0307508_10025129 | 3300031616 | Bacteria | 5402 |
| 39 | Ga0307514_10004919 | 3300031649 | Bacteria | 12147 |
| 40 | Ga0307514_10030666 | 3300031649 | Bacteria | 4315 |
| 41 | Ga0307516_10001498 | 3300031730 | Bacteria | 32132 |
| 42 | Ga0373935_0015742 | 3300035692 | Bacteria | 4574 |
| 43 | Ga0373947_0000003 | 3300035725 | Bacteria | 345338 |
| 44 | Ga0395899_0104777 | 3300037312 | Bacteria | 2038 |
| 45 | Ga0395900_0015077 | 3300037418 | Bacteria | 7879 |
| 46 | Ga0395898_0000687 | 3300037466 | Bacteria | 60763 |
| 47 | Ga0395898_0094560 | 3300037466 | Bacteria | 2872 |
| 48 | Ga0395898_0177115 | 3300037466 | Bacteria | 2038 |
| 49 | Ga0395905_0091813 | 3300037471 | Bacteria | 2847 |
| 50 | Ga0395901_0002728 | 3300038443 | Bacteria | 17808 |
| 51 | Ga0439436_0000056 | 3300041404 | Bacteria | 31521 |
| 52 | Ga0439436_0000325 | 3300041404 | Bacteria | 11706 |
| 53 | Ga0439439_0008130 | 3300041406 | Bacteria | 2469 |
| 54 | Ga0451853_0040125 | 3300041512 | Bacteria | 2242 |
| 55 | Ga0451853_0324495 | 3300041512 | Bacteria | 1825 |
| 56 | Ga0439433_0003480 | 3300041999 | Bacteria | 3378 |
| 57 | Ga0439449_0001528 | 3300042007 | Bacteria | 9052 |
| 58 | Ga0439449_0002807 | 3300042007 | Bacteria | 6771 |
| 59 | Ga0439449_0014034 | 3300042007 | Bacteria | 3013 |
| 60 | Ga0439454_000652 | 3300042011 | Bacteria | 2909 |
| 61 | Ga0439457_000019 | 3300042014 | Bacteria | 31524 |
| 62 | Ga0439457_000475 | 3300042014 | Bacteria | 11578 |
| 63 | Ga0439457_001227 | 3300042014 | Bacteria | 7710 |
| 64 | Ga0439462_0001459 | 3300042015 | Bacteria | 5271 |
| 65 | Ga0450911_000750 | 3300042115 | Bacteria | 9300 |
| 66 | Ga0450911_002990 | 3300042115 | Bacteria | 3112 |
| 67 | Ga0450911_004420 | 3300042115 | Bacteria | 2306 |
| 68 | Ga0450920_013657 | 3300042122 | Bacteria | 1530 |
| 69 | Ga0450922_002479 | 3300042124 | Bacteria | 1734 |
| 70 | Ga0450897_000136 | 3300042128 | Bacteria | 3435 |
| 71 | Ga0450897_000204 | 3300042128 | Bacteria | 2964 |
| 72 | Ga0450894_000026 | 3300042131 | Bacteria | 21361 |
| 73 | Ga0450894_001684 | 3300042131 | Bacteria | 3114 |
| 74 | Ga0450894_004706 | 3300042131 | Bacteria | 1771 |
| 75 | Ga0450895_000014 | 3300042132 | Bacteria | 6909 |
| 76 | Ga0450896_000699 | 3300042133 | Bacteria | 3719 |
| 77 | Ga0450898_000008 | 3300042134 | Bacteria | 18171 |
| 78 | Ga0450898_001935 | 3300042134 | Bacteria | 2822 |
| 79 | Ga0450899_000052 | 3300042135 | Bacteria | 9289 |
| 80 | Ga0450899_002379 | 3300042135 | Bacteria | 2036 |
| 81 | Ga0450906_000169 | 3300042145 | Bacteria | 12226 |
| 82 | Ga0450906_002642 | 3300042145 | Bacteria | 3908 |
| 83 | Ga0450907_003225 | 3300042146 | Bacteria | 2938 |
| 84 | Ga0450910_004737 | 3300042147 | Bacteria | 1845 |
| 85 | Ga0439458_0001068 | 3300042157 | Bacteria | 6980 |
| 86 | Ga0450908_000867 | 3300042184 | Bacteria | 5845 |
| 87 | Ga0450908_005457 | 3300042184 | Bacteria | 2437 |
| 88 | Ga0450909_000264 | 3300042185 | Bacteria | 6324 |
| 89 | Ga0450909_009229 | 3300042185 | Bacteria | 1439 |
| 90 | Ga0466969_0000076 | 3300044656 | Bacteria | 51702 |
| 91 | Ga0466969_0000810 | 3300044656 | Bacteria | 16980 |
| 92 | Ga0466965_0009809 | 3300044683 | Bacteria | 4455 |
| 93 | Ga0466959_0000230 | 3300045049 | Bacteria | 35103 |
| 94 | Ga0495603_0000041 | 3300046455 | Bacteria | 54992 |
| 95 | Ga0495603_0002482 | 3300046455 | Bacteria | 10850 |
| 96 | Ga0495590_0006115 | 3300046457 | Bacteria | 4720 |
| 97 | Ga0495629_0000185 | 3300046459 | Bacteria | 56124 |
| 98 | Ga0495629_0011578 | 3300046459 | Bacteria | 6405 |
| 99 | Ga0495629_0036293 | 3300046459 | Bacteria | 3481 |
| 100 | Ga0495639_0015385 | 3300046475 | Bacteria | 3318 |
| 101 | Ga0495594_0000475 | 3300046499 | Bacteria | 20429 |
| 102 | Ga0495594_0001688 | 3300046499 | Bacteria | 11480 |
| 103 | Ga0495583_0002677 | 3300046506 | Bacteria | 14822 |
| 104 | Ga0495583_0003025 | 3300046506 | Bacteria | 13397 |
| 105 | Ga0495620_0024544 | 3300046515 | Bacteria | 2866 |
| 106 | Ga0495643_0021670 | 3300046522 | Bacteria | 3681 |
| 107 | Ga0495648_0013101 | 3300046524 | Bacteria | 6148 |
| 108 | Ga0495666_0000029 | 3300046526 | Bacteria | 54957 |
| 109 | Ga0495597_0000182 | 3300046542 | Bacteria | 56148 |
| 110 | Ga0495622_0001109 | 3300046557 | Bacteria | 14090 |
| 111 | Ga0495622_0004937 | 3300046557 | Bacteria | 6177 |
| 112 | Ga0495634_0000386 | 3300046642 | Bacteria | 43016 |
| 113 | Ga0495625_0001702 | 3300046660 | Bacteria | 25625 |
| 114 | Ga0495625_0023076 | 3300046660 | Bacteria | 4757 |
| 115 | Ga0495613_0003802 | 3300046689 | Bacteria | 11316 |
| 116 | Ga0495613_0005034 | 3300046689 | Bacteria | 9915 |
| 117 | Ga0495581_0016384 | 3300047315 | Bacteria | 4309 |
| 118 | Ga0495581_0125134 | 3300047315 | Bacteria | 1497 |
| 119 | Ga0495636_0000072 | 3300047318 | Bacteria | 42868 |
| 120 | Ga0495676_0000714 | 3300047321 | Bacteria | 27671 |
| 121 | Ga0495680_0002120 | 3300047322 | Bacteria | 20609 |
| 122 | Ga0495687_004974 | 3300047443 | Bacteria | 8689 |
| 123 | Ga0495687_005573 | 3300047443 | Bacteria | 7979 |
| 124 | Ga0495687_014513 | 3300047443 | Bacteria | 4050 |
| 125 | Ga0495687_034324 | 3300047443 | Bacteria | 2293 |
| 126 | Ga0495685_003426 | 3300047447 | Bacteria | 5065 |
| 127 | Ga0495686_0043192 | 3300047472 | Bacteria | 2860 |
| 128 | Ga0495614_0000138 | 3300048089 | Bacteria | 25939 |
| 129 | Ga0495614_0002590 | 3300048089 | Bacteria | 8040 |
| 130 | Ga0496110_0142632 | 3300048913 | Bacteria | 2166 |
| 131 | Ga0496118_0018359 | 3300048921 | Bacteria | 6314 |
| 132 | Ga0496119_0034888 | 3300048922 | Unclassified | 3303 |
| 133 | Ga0501031_0145556 | 3300049568 | Bacteria | 1548 |
| 134 | Ga0501032_0070649 | 3300049569 | Bacteria | 2328 |
| 135 | Ga0501034_0070364 | 3300049571 | Bacteria | 3510 |
| 136 | Ga0501034_0119475 | 3300049571 | Bacteria | 2622 |
| 137 | Ga0501036_0124667 | 3300049572 | Bacteria | 2175 |
| 138 | Ga0501037_0000384 | 3300049573 | Bacteria | 36761 |
| 139 | Ga0501037_0099317 | 3300049573 | Bacteria | 2102 |
| 140 | Ga0501038_0004467 | 3300049574 | Bacteria | 13003 |
| 141 | Ga0501038_0068889 | 3300049574 | Bacteria | 3007 |
| 142 | Ga0501043_0048195 | 3300049579 | Bacteria | 3350 |
| 143 | Ga0501043_0055836 | 3300049579 | Bacteria | 3102 |
| 144 | Ga0501046_0005176 | 3300049580 | Bacteria | 11684 |
| 145 | Ga0501047_0048398 | 3300049581 | Bacteria | 4105 |
| 146 | Ga0501047_0119428 | 3300049581 | Bacteria | 2518 |
| 147 | Ga0501048_0012461 | 3300049582 | Bacteria | 6325 |
| 148 | Ga0501070_0000686 | 3300049586 | Bacteria | 31019 |
| 149 | Ga0501070_0086119 | 3300049586 | Bacteria | 2601 |
| 150 | Ga0501035_0041618 | 3300049822 | Bacteria | 4148 |
| 151 | Ga0501035_0118013 | 3300049822 | Bacteria | 2321 |
| 152 | Ga0501044_0019495 | 3300049823 | Bacteria | 7253 |
| 153 | Ga0501044_0142804 | 3300049823 | Bacteria | 2381 |
| 154 | Ga0500616_0003364 | 3300053153 | Bacteria | 12286 |
| 155 | Ga0590074_000471 | 3300059423 | Bacteria | 5907 |
| 156 | Ga0590075_000006 | 3300059424 | Bacteria | 64469 |
| 157 | Ga0590077_000009 | 3300059426 | Bacteria | 42319 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049568 | Ga0501031_0145556 | Ga0501031_0145556_82_1233 | 357 |
| 2 | 3300049573 | Ga0501037_0000384 | Ga0501037_0000384_19026_20189 | 376 |
| 3 | 3300049569 | Ga0501032_0070649 | Ga0501032_0070649_301_1551 | 380 |
| 4 | 3300049571 | Ga0501034_0119475 | Ga0501034_0119475_258_1508 | 380 |
| 5 | 3300049581 | Ga0501047_0119428 | Ga0501047_0119428_861_2111 | 380 |
| 6 | 3300049586 | Ga0501070_0086119 | Ga0501070_0086119_1241_2491 | 380 |
| 7 | 3300049822 | Ga0501035_0118013 | Ga0501035_0118013_237_1487 | 380 |
| 8 | 3300044656 | Ga0466969_0000076 | Ga0466969_0000076_17773_19035 | 381 |
| 9 | 3300045049 | Ga0466959_0000230 | Ga0466959_0000230_25263_26525 | 381 |
| 10 | 3300046475 | Ga0495639_0015385 | Ga0495639_0015385_1279_2424 | 381 |
| 11 | 3300049571 | Ga0501034_0070364 | Ga0501034_0070364_1166_2329 | 381 |
| 12 | 3300049573 | Ga0501037_0099317 | Ga0501037_0099317_777_1940 | 381 |
| 13 | 3300049574 | Ga0501038_0004467 | Ga0501038_0004467_9378_10541 | 381 |
| 14 | 3300049579 | Ga0501043_0055836 | Ga0501043_0055836_1182_2345 | 381 |
| 15 | 3300049581 | Ga0501047_0048398 | Ga0501047_0048398_1444_2607 | 381 |
| 16 | 3300049582 | Ga0501048_0012461 | Ga0501048_0012461_2409_3572 | 381 |
| 17 | 3300049822 | Ga0501035_0041618 | Ga0501035_0041618_1992_3155 | 381 |
| 18 | 3300049823 | Ga0501044_0019495 | Ga0501044_0019495_3632_4795 | 381 |
| 19 | 3300035692 | Ga0373935_0015742 | Ga0373935_0015742_590_1744 | 384 |
| 20 | 3300035725 | Ga0373947_0000003 | Ga0373947_0000003_165719_166873 | 384 |
| 21 | iso_pu_bacteria | 2862178590 | 2862185736 | 384 |
| 22 | iso_pu_bacteria | 2873151551 | 2873156327 | 384 |
| 23 | 3300009177 | Ga0105248_10001461 | Ga0105248_100014616 | 386 |
| 24 | 3300049572 | Ga0501036_0124667 | Ga0501036_0124667_436_1686 | 386 |
| 25 | 3300049574 | Ga0501038_0068889 | Ga0501038_0068889_1154_2404 | 386 |
| 26 | 3300049579 | Ga0501043_0048195 | Ga0501043_0048195_1861_3111 | 386 |
| 27 | 3300049823 | Ga0501044_0142804 | Ga0501044_0142804_858_2108 | 386 |
| 28 | 3300037312 | Ga0395899_0104777 | Ga0395899_0104777_384_1550 | 388 |
| 29 | 3300037418 | Ga0395900_0015077 | Ga0395900_0015077_3964_5130 | 388 |
| 30 | 3300037466 | Ga0395898_0000687 | Ga0395898_0000687_24297_25463 | 388 |
| 31 | 3300037466 | Ga0395898_0094560 | Ga0395898_0094560_733_1899 | 388 |
| 32 | 3300037466 | Ga0395898_0177115 | Ga0395898_0177115_340_1506 | 388 |
| 33 | 3300037471 | Ga0395905_0091813 | Ga0395905_0091813_1050_2216 | 388 |
| 34 | 3300038443 | Ga0395901_0002728 | Ga0395901_0002728_15199_16365 | 388 |
| 35 | 3300041512 | Ga0451853_0324495 | Ga0451853_0324495_494_1660 | 388 |
| 36 | 3300044683 | Ga0466965_0009809 | Ga0466965_0009809_688_1854 | 388 |
| 37 | 3300025302 | Ga0207426_1007718 | Ga0207426_10077187 | 394 |
| 38 | 3300003354 | JGI25160J50197_1008074 | JGI25160J50197_10080742 | 397 |
| 39 | 3300044656 | Ga0466969_0000810 | Ga0466969_0000810_388_1581 | 397 |
| 40 | 3300046459 | Ga0495629_0011578 | Ga0495629_0011578_4699_5892 | 397 |
| 41 | 3300047318 | Ga0495636_0000072 | Ga0495636_0000072_31415_32611 | 397 |
| 42 | iso_pu_bacteria | 8003856774 | 8003862257 | 399 |
| 43 | 3300031649 | Ga0307514_10004919 | Ga0307514_100049196 | 400 |
| 44 | 3300042115 | Ga0450911_004420 | Ga0450911_004420_197_1405 | 402 |
| 45 | 3300042128 | Ga0450897_000204 | Ga0450897_000204_1275_2483 | 402 |
| 46 | 3300042131 | Ga0450894_000026 | Ga0450894_000026_13298_14506 | 402 |
| 47 | 3300042133 | Ga0450896_000699 | Ga0450896_000699_1484_2692 | 402 |
| 48 | 3300042134 | Ga0450898_000008 | Ga0450898_000008_5951_7159 | 402 |
| 49 | 3300042135 | Ga0450899_000052 | Ga0450899_000052_6019_7227 | 402 |
| 50 | 3300042145 | Ga0450906_000169 | Ga0450906_000169_904_2112 | 402 |
| 51 | 3300042157 | Ga0439458_0001068 | Ga0439458_0001068_2859_4067 | 402 |
| 52 | 3300042184 | Ga0450908_005457 | Ga0450908_005457_133_1341 | 402 |
| 53 | 3300042185 | Ga0450909_009229 | Ga0450909_009229_178_1386 | 402 |
| 54 | 3300047443 | Ga0495687_014513 | Ga0495687_014513_2645_3853 | 402 |
| 55 | 3300009011 | Ga0105251_10029421 | Ga0105251_100294212 | 403 |
| 56 | 3300042007 | Ga0439449_0001528 | Ga0439449_0001528_2598_3809 | 403 |
| 57 | 3300042014 | Ga0439457_001227 | Ga0439457_001227_4303_5514 | 403 |
| 58 | 3300046455 | Ga0495603_0000041 | Ga0495603_0000041_7941_9152 | 403 |
| 59 | 3300046455 | Ga0495603_0002482 | Ga0495603_0002482_8631_9845 | 403 |
| 60 | 3300046457 | Ga0495590_0006115 | Ga0495590_0006115_907_2118 | 403 |
| 61 | 3300046459 | Ga0495629_0000185 | Ga0495629_0000185_1561_2772 | 403 |
| 62 | 3300046459 | Ga0495629_0036293 | Ga0495629_0036293_898_2112 | 403 |
| 63 | 3300046499 | Ga0495594_0000475 | Ga0495594_0000475_3904_5115 | 403 |
| 64 | 3300046499 | Ga0495594_0001688 | Ga0495594_0001688_7941_9152 | 403 |
| 65 | 3300046506 | Ga0495583_0002677 | Ga0495583_0002677_13457_14668 | 403 |
| 66 | 3300046515 | Ga0495620_0024544 | Ga0495620_0024544_1178_2389 | 403 |
| 67 | 3300046522 | Ga0495643_0021670 | Ga0495643_0021670_1494_2705 | 403 |
| 68 | 3300046524 | Ga0495648_0013101 | Ga0495648_0013101_4242_5453 | 403 |
| 69 | 3300046526 | Ga0495666_0000029 | Ga0495666_0000029_27872_29083 | 403 |
| 70 | 3300046557 | Ga0495622_0001109 | Ga0495622_0001109_7374_8585 | 403 |
| 71 | 3300046557 | Ga0495622_0004937 | Ga0495622_0004937_907_2118 | 403 |
| 72 | 3300046642 | Ga0495634_0000386 | Ga0495634_0000386_29892_31103 | 403 |
| 73 | 3300046660 | Ga0495625_0023076 | Ga0495625_0023076_2166_3377 | 403 |
| 74 | 3300046689 | Ga0495613_0003802 | Ga0495613_0003802_245_1456 | 403 |
| 75 | 3300046689 | Ga0495613_0005034 | Ga0495613_0005034_2496_3710 | 403 |
| 76 | 3300047315 | Ga0495581_0016384 | Ga0495581_0016384_2257_3468 | 403 |
| 77 | 3300047315 | Ga0495581_0125134 | Ga0495581_0125134_170_1381 | 403 |
| 78 | 3300047321 | Ga0495676_0000714 | Ga0495676_0000714_21512_22726 | 403 |
| 79 | 3300047322 | Ga0495680_0002120 | Ga0495680_0002120_17114_18325 | 403 |
| 80 | 3300047443 | Ga0495687_005573 | Ga0495687_005573_3058_4269 | 403 |
| 81 | 3300047443 | Ga0495687_034324 | Ga0495687_034324_265_1476 | 403 |
| 82 | 3300047447 | Ga0495685_003426 | Ga0495685_003426_3683_4894 | 403 |
| 83 | 3300047472 | Ga0495686_0043192 | Ga0495686_0043192_393_1604 | 403 |
| 84 | 3300048089 | Ga0495614_0000138 | Ga0495614_0000138_2520_3731 | 403 |
| 85 | 3300048089 | Ga0495614_0002590 | Ga0495614_0002590_5875_7089 | 403 |
| 86 | 3300048913 | Ga0496110_0142632 | Ga0496110_0142632_441_1655 | 403 |
| 87 | 3300048921 | Ga0496118_0018359 | Ga0496118_0018359_4450_5697 | 403 |
| 88 | iso_pu_bacteria | 2527291627 | 2528206067 | 403 |
| 89 | iso_pu_bacteria | 2546825537 | 2546951337 | 403 |
| 90 | iso_pu_bacteria | 2684623036 | 2686544631 | 403 |
| 91 | iso_pu_bacteria | 2773857924 | 2774867435 | 403 |
| 92 | iso_pu_bacteria | 637000116 | 637881460 | 403 |
| 93 | 3300005841 | Ga0068863_100005378 | Ga0068863_1000053788 | 404 |
| 94 | 3300025941 | Ga0207711_10001072 | Ga0207711_100010726 | 404 |
| 95 | 3300048922 | Ga0496119_0034888 | Ga0496119_0034888_490_1737 | 404 |
| 96 | 3300053153 | Ga0500616_0003364 | Ga0500616_0003364_8069_9301 | 404 |
| 97 | iso_pu_bacteria | 2867346516 | 2867351625 | 404 |
| 98 | iso_pu_bacteria | 8056447290 | 8056449927 | 404 |
| 99 | iso_pu_bacteria | 2918501144 | 2918504736 | 405 |
| 100 | 3300003320 | rootH2_10030459 | rootH2_100304594 | 406 |
| 101 | 3300003322 | rootL2_10111909 | rootL2_101119095 | 406 |
| 102 | 3300003322 | rootL2_10111910 | rootL2_101119102 | 406 |
| 103 | 3300003323 | rootH1_10065249 | rootH1_100652493 | 406 |
| 104 | 3300003354 | JGI25160J50197_1002169 | JGI25160J50197_10021694 | 406 |
| 105 | 3300005336 | Ga0070680_100032516 | Ga0070680_1000325166 | 406 |
| 106 | 3300005347 | Ga0070668_100000476 | Ga0070668_10000047617 | 406 |
| 107 | 3300005458 | Ga0070681_10202367 | Ga0070681_102023672 | 406 |
| 108 | 3300005458 | Ga0070681_10284088 | Ga0070681_102840882 | 406 |
| 109 | 3300005536 | Ga0070697_100000895 | Ga0070697_10000089521 | 406 |
| 110 | 3300005577 | Ga0068857_100019726 | Ga0068857_1000197261 | 406 |
| 111 | 3300005614 | Ga0068856_100058319 | Ga0068856_1000583191 | 406 |
| 112 | 3300005844 | Ga0068862_100036281 | Ga0068862_1000362815 | 406 |
| 113 | 3300009979 | Ga0105032_101674 | Ga0105032_1016742 | 406 |
| 114 | 3300009987 | Ga0105030_100005 | Ga0105030_10000512 | 406 |
| 115 | 3300014497 | Ga0182008_10005428 | Ga0182008_100054288 | 406 |
| 116 | 3300015262 | Ga0182007_10015763 | Ga0182007_100157635 | 406 |
| 117 | 3300015265 | Ga0182005_1022569 | Ga0182005_10225691 | 406 |
| 118 | 3300025302 | Ga0207426_1004251 | Ga0207426_10042515 | 406 |
| 119 | 3300025302 | Ga0207426_1004824 | Ga0207426_10048244 | 406 |
| 120 | 3300025912 | Ga0207707_10242823 | Ga0207707_102428231 | 406 |
| 121 | 3300025921 | Ga0207652_10136105 | Ga0207652_101361053 | 406 |
| 122 | 3300025972 | Ga0207668_10039078 | Ga0207668_100390782 | 406 |
| 123 | 3300026078 | Ga0207702_10028906 | Ga0207702_100289065 | 406 |
| 124 | 3300026116 | Ga0207674_10163590 | Ga0207674_101635902 | 406 |
| 125 | 3300028380 | Ga0268265_10073651 | Ga0268265_100736515 | 406 |
| 126 | 3300028794 | Ga0307515_10128753 | Ga0307515_101287532 | 406 |
| 127 | 3300030522 | Ga0307512_10014841 | Ga0307512_100148414 | 406 |
| 128 | 3300031456 | Ga0307513_10052290 | Ga0307513_100522907 | 406 |
| 129 | 3300031548 | Ga0307408_100034144 | Ga0307408_1000341444 | 406 |
| 130 | 3300031616 | Ga0307508_10012992 | Ga0307508_100129925 | 406 |
| 131 | 3300031616 | Ga0307508_10025129 | Ga0307508_100251294 | 406 |
| 132 | 3300031649 | Ga0307514_10030666 | Ga0307514_100306663 | 406 |
| 133 | 3300031730 | Ga0307516_10001498 | Ga0307516_1000149813 | 406 |
| 134 | 3300041404 | Ga0439436_0000056 | Ga0439436_0000056_13741_14994 | 406 |
| 135 | 3300041404 | Ga0439436_0000325 | Ga0439436_0000325_337_1587 | 406 |
| 136 | 3300041406 | Ga0439439_0008130 | Ga0439439_0008130_412_1665 | 406 |
| 137 | 3300041512 | Ga0451853_0040125 | Ga0451853_0040125_894_2141 | 406 |
| 138 | 3300041999 | Ga0439433_0003480 | Ga0439433_0003480_1322_2575 | 406 |
| 139 | 3300042007 | Ga0439449_0002807 | Ga0439449_0002807_1428_2681 | 406 |
| 140 | 3300042007 | Ga0439449_0014034 | Ga0439449_0014034_711_1961 | 406 |
| 141 | 3300042011 | Ga0439454_000652 | Ga0439454_000652_59_1312 | 406 |
| 142 | 3300042014 | Ga0439457_000019 | Ga0439457_000019_13744_14997 | 406 |
| 143 | 3300042014 | Ga0439457_000475 | Ga0439457_000475_9932_11182 | 406 |
| 144 | 3300042015 | Ga0439462_0001459 | Ga0439462_0001459_739_1992 | 406 |
| 145 | 3300042115 | Ga0450911_000750 | Ga0450911_000750_17_1267 | 406 |
| 146 | 3300042115 | Ga0450911_002990 | Ga0450911_002990_604_1854 | 406 |
| 147 | 3300042122 | Ga0450920_013657 | Ga0450920_013657_228_1478 | 406 |
| 148 | 3300042124 | Ga0450922_002479 | Ga0450922_002479_307_1557 | 406 |
| 149 | 3300042128 | Ga0450897_000136 | Ga0450897_000136_785_2035 | 406 |
| 150 | 3300042131 | Ga0450894_001684 | Ga0450894_001684_1401_2651 | 406 |
| 151 | 3300042131 | Ga0450894_004706 | Ga0450894_004706_129_1379 | 406 |
| 152 | 3300042132 | Ga0450895_000014 | Ga0450895_000014_1088_2338 | 406 |
| 153 | 3300042134 | Ga0450898_001935 | Ga0450898_001935_26_1276 | 406 |
| 154 | 3300042135 | Ga0450899_002379 | Ga0450899_002379_706_1956 | 406 |
| 155 | 3300042145 | Ga0450906_002642 | Ga0450906_002642_1401_2651 | 406 |
| 156 | 3300042146 | Ga0450907_003225 | Ga0450907_003225_108_1358 | 406 |
| 157 | 3300042147 | Ga0450910_004737 | Ga0450910_004737_299_1549 | 406 |
| 158 | 3300042184 | Ga0450908_000867 | Ga0450908_000867_3497_4747 | 406 |
| 159 | 3300042185 | Ga0450909_000264 | Ga0450909_000264_126_1376 | 406 |
| 160 | 3300046506 | Ga0495583_0003025 | Ga0495583_0003025_8378_9688 | 406 |
| 161 | 3300046542 | Ga0495597_0000182 | Ga0495597_0000182_36669_37979 | 406 |
| 162 | 3300046660 | Ga0495625_0001702 | Ga0495625_0001702_2689_3999 | 406 |
| 163 | 3300047443 | Ga0495687_004974 | Ga0495687_004974_6789_8099 | 406 |
| 164 | 3300049580 | Ga0501046_0005176 | Ga0501046_0005176_6579_7832 | 406 |
| 165 | 3300049586 | Ga0501070_0000686 | Ga0501070_0000686_8837_10087 | 406 |
| 166 | 3300059423 | Ga0590074_000471 | Ga0590074_000471_301_1551 | 406 |
| 167 | 3300059424 | Ga0590075_000006 | Ga0590075_000006_15603_16853 | 406 |
| 168 | 3300059426 | Ga0590077_000009 | Ga0590077_000009_32424_33674 | 406 |
| 169 | iso_pu_bacteria | 2751185782 | 2753272161 | 406 |
| 170 | iso_pu_bacteria | 2852635781 | 2852636709 | 406 |
| 171 | iso_pu_bacteria | 2862507626 | 2862512485 | 406 |
| 172 | iso_pu_bacteria | 2912757875 | 2912760191 | 406 |
| 173 | iso_pu_bacteria | 2990059506 | 2990060453 | 406 |
| 174 | iso_pu_bacteria | 2995463766 | 2995469701 | 406 |
| 175 | iso_pu_bacteria | 3006321560 | 3006322280 | 406 |
| 176 | iso_pu_bacteria | 8033684223 | 8033687825 | 406 |
| 177 | iso_pu_bacteria | 8048127548 | 8048136550 | 406 |
| 178 | iso_pu_bacteria | 8054160619 | 8054165552 | 406 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3f51-assembly1.cif.gz_A | crystal structure of the clp gene regulator clgr from corynebacterium glutamicum | 0.9548 | 6 | 66 |
| 1utx-assembly1.cif.gz_B | regulation of cytolysin expression by enterococcus faecalis: role of cylr2 | 0.9464 | 10 | 65 |
| 7t8i-assembly1.cif.gz_B | crystal structure of the immr transcriptional regulator dna-binding domain of bacillus subtilis | 0.9463 | 4 | 69 |
| 5woq-assembly2.cif.gz_C | crystal structure of an xre family protein transcriptional regulator from mycobacterium smegmatis | 0.946 | 6 | 60 |
| 3f52-assembly1.cif.gz_A | crystal structure of the clp gene regulator clgr from c. glutamicum | 0.9373 | 6 | 66 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3f51C00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9768 | 6 | 59 | 1.10.260.40 |
| 3f51A00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9548 | 6 | 66 | 1.10.260.40 |
| 2b5aB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9496 | 6 | 60 | 1.10.260.40 |
| 3f52A00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9373 | 6 | 66 | 1.10.260.40 |
| 2b5aC00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.9299 | 6 | 60 | 1.10.260.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A239JLT4-F1-model_v4 | Tetratricopeptide repeat-containing protein | 0.9965 | 300 | 406 |
|
| AF-A0A1C4V330-F1-model_v4 | XRE family transcriptional regulator | 0.9853 | 77 | 404 |
|
| AF-A0A239JLT4-F1-model_v4 | Tetratricopeptide repeat-containing protein | 0.9782 | 300 | 406 |
|
| AF-A0A291SZ57-F1-model_v4 | deleted | 0.9746 | 229 | 406 |
|
| AF-A0A291SZ57-F1-model_v4 | deleted | 0.964 | 229 | 406 |
|
Predicted Structure (AlphaFold2)
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