F271070

General Info

Members Datasets Scaffolds Average Seq Length
177 127 136 304

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221597|2643995257
Length 347
Sequence FLIGLREGLEAALVVGILVAYLTRLQRRDVLPRLWIGVGLAIGLALTIGAVLTFGTYTLTFEAQELLGGTLSLLTVAMVTWMIFWMQRTARTLKRSLEEGIDRALAASSLWAVVAIGFVSVAREGVETTLLLWSMVQTFGDGPTALVGALLGLAAAVVLGWLLARGMLRLDLRRFFTWTGAFLIIVAAGVLAYAIHDLQEAGALPGPFTTAAPIDPLTGAVAVGWAAFPFGWAFDVSAVIPPTSPLAAILQATVGFMPRMSWLQVVAWVLYVGVVGAIWARGQFRPPKSPAATERAPEPDTAHVPAAAPAPVAPSPAASVPIAADAPNIPATTTAASVPTPSQQGAP

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221575 Microbacterium sp. Root61 Isolate Unclassified
5 2643221597 Microbacterium sp. Root180 Isolate Unclassified
6 2643221630 Microbacterium sp. Root322 Isolate Unclassified
7 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
8 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
9 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
10 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
11 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
12 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
13 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
14 2773857759 Microbacterium sp. 1294 Isolate Unclassified
15 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
16 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
17 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
18 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
19 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
20 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
21 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
22 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
23 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
24 2919069694 Microbacterium sp. 1154 Isolate Unclassified
25 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
26 2919395869 Microbacterium resistens 2980 Isolate Unclassified
27 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
28 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
29 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
30 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
31 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
32 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
33 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
34 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
35 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
36 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
37 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
38 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
39 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
40 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
41 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
42 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
47 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
69 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
78 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
79 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
80 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
88 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
91 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
92 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 8002775197 Frankia nepalensis CN7 Isolate Nodule
125 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
126 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
127 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 75.71
Metatranscriptomes 1.13
Isolates 23.16

Biome Distribution

Category Percentage (%)
Aerial Root 0.56
Bulb 0
Endosphere 5.08
Nodule 0.56
Rhizoplane 6.78
Rhizosphere 46.89
Stem 0
Stem Tuber 0
Unclassified 40.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004213 3300001979 Bacteria 6210
2 JGI25154J39366_1002014 3300002738 Bacteria 5881
3 JGI25407J50210_10009639 3300003373 Bacteria 2451
4 Ga0006562J51391_1059014 3300003578 Bacteria 12220
5 Ga0065714_10109172 3300005288 Bacteria 1504
6 Ga0070665_100035818 3300005548 Bacteria 4993
7 Ga0068859_100000155 3300005617 Bacteria 65623
8 Ga0068862_100000009 3300005844 Bacteria 298620
9 Ga0081538_10009963 3300005981 Bacteria 7848
10 Ga0075368_10008641 3300006042 Bacteria 3636
11 Ga0075364_10146065 3300006051 Bacteria 1592
12 Ga0097620_100000155 3300006931 Bacteria 65623
13 Ga0105244_10024511 3300009036 Bacteria 3291
14 Ga0105249_10005869 3300009553 Bacteria 10625
15 Ga0157371_10138871 3300013102 Bacteria 1731
16 Ga0171462_1001 3300013250 Bacteria 1135406
17 Ga0163162_10011031 3300013306 Bacteria 8802
18 Ga0157380_10049396 3300014326 Bacteria 3318
19 Ga0209646_1000098 3300025246 Bacteria 180711
20 Ga0207712_10006624 3300025961 Bacteria 7312
21 Ga0207668_10347809 3300025972 Bacteria 1239
22 Ga0268265_10000050 3300028380 Bacteria 175787
23 Ga0307513_10031441 3300031456 Bacteria 6011
24 Ga0307406_10000115 3300031901 Bacteria 46616
25 Ga0307406_10000263 3300031901 Bacteria 31677
26 Ga0307406_10002208 3300031901 Bacteria 10595
27 Ga0307406_10323597 3300031901 Bacteria 1194
28 Ga0307414_10374794 3300032004 Bacteria 1229
29 Ga0395899_0049733 3300037312 Bacteria 3115
30 Ga0395898_0246278 3300037466 Bacteria 1704
31 Ga0451843_0383855 3300041509 Bacteria 1418
32 Ga0451843_0989568 3300041509 Bacteria 1097
33 Ga0466969_0056453 3300044656 Bacteria 1917
34 Ga0466965_0106962 3300044683 Bacteria 1435
35 Ga0466966_0311222 3300044684 Bacteria 946
36 Ga0466961_0052878 3300044693 Bacteria 2592
37 Ga0466961_0140123 3300044693 Bacteria 1514
38 Ga0466963_0005074 3300044694 Bacteria 7697
39 Ga0466963_0050351 3300044694 Bacteria 2757
40 Ga0466968_0019042 3300044735 Bacteria 2759
41 Ga0466970_0000429 3300044765 Bacteria 20581
42 Ga0466970_0071741 3300044765 Bacteria 1863
43 Ga0466957_0024587 3300044842 Bacteria 3565
44 Ga0466959_0098514 3300045049 Bacteria 2094
45 Ga0466958_0029992 3300045836 Bacteria 3227
46 Ga0466958_0059783 3300045836 Bacteria 2319
47 Ga0466967_0092035 3300045976 Bacteria 2757
48 Ga0495627_006338 3300046453 Bacteria 4645
49 Ga0495620_0031156 3300046515 Bacteria 2447
50 Ga0495654_0041793 3300046530 Bacteria 2279
51 Ga0496100_0053201 3300048903 Bacteria 2635
52 Ga0496101_0005793 3300048904 Bacteria 7898
53 Ga0496104_0476523 3300048907 Bacteria 1159
54 Ga0496105_0086750 3300048908 Bacteria 2586
55 Ga0496105_0161968 3300048908 Bacteria 1836
56 Ga0496105_0167608 3300048908 Bacteria 1801
57 Ga0496107_0006615 3300048910 Bacteria 7979
58 Ga0496108_0033600 3300048911 Bacteria 4261
59 Ga0496108_0235728 3300048911 Bacteria 1592
60 Ga0496114_0037325 3300048917 Bacteria 4018
61 Ga0496114_0043940 3300048917 Bacteria 3705
62 Ga0496115_0109277 3300048918 Bacteria 2270
63 Ga0496116_0013619 3300048919 Bacteria 6540
64 Ga0496117_0000028 3300048920 Bacteria 407392
65 Ga0496117_0000676 3300048920 Bacteria 54490
66 Ga0496117_0009549 3300048920 Bacteria 8998
67 Ga0496117_0018604 3300048920 Bacteria 5744
68 Ga0496118_0006370 3300048921 Bacteria 13006
69 Ga0496118_0010674 3300048921 Bacteria 9055
70 Ga0496118_0041309 3300048921 Bacteria 3653
71 Ga0496119_0004444 3300048922 Bacteria 13956
72 Ga0496119_0005229 3300048922 Bacteria 12516
73 Ga0496119_0009563 3300048922 Bacteria 8289
74 Ga0496119_0012973 3300048922 Bacteria 6697
75 Ga0496119_0030281 3300048922 Bacteria 3653
76 Ga0496120_0002231 3300048923 Bacteria 20317
77 Ga0496120_0003459 3300048923 Bacteria 14363
78 Ga0496120_0008919 3300048923 Bacteria 7183
79 Ga0496122_0000055 3300048925 Bacteria 258485
80 Ga0496122_0006207 3300048925 Bacteria 13863
81 Ga0496122_0024110 3300048925 Bacteria 5333
82 Ga0496122_0040019 3300048925 Bacteria 3732
83 Ga0496122_0059309 3300048925 Bacteria 2825
84 Ga0496122_0072962 3300048925 Bacteria 2437
85 Ga0496123_0000003 3300048926 Bacteria 866556
86 Ga0496123_0000879 3300048926 Bacteria 47728
87 Ga0496123_0001962 3300048926 Bacteria 26720
88 Ga0496123_0027408 3300048926 Bacteria 4244
89 Ga0496124_0033778 3300048927 Bacteria 4496
90 Ga0496124_0053741 3300048927 Bacteria 3412
91 Ga0496124_0144818 3300048927 Bacteria 1871
92 Ga0496125_0002853 3300048928 Bacteria 21750
93 Ga0496125_0007555 3300048928 Bacteria 11546
94 Ga0496125_0007769 3300048928 Bacteria 11350
95 Ga0496125_0011822 3300048928 Bacteria 8699
96 Ga0496126_0033502 3300048929 Bacteria 4832
97 Ga0496126_0054086 3300048929 Bacteria 3638
98 Ga0496126_0055490 3300048929 Bacteria 3584
99 Ga0496126_0080912 3300048929 Bacteria 2873
100 Ga0496126_0110020 3300048929 Bacteria 2401
101 Ga0501034_0002252 3300049571 Bacteria 23689
102 Ga0501034_0080691 3300049571 Bacteria 3256
103 Ga0501036_0079487 3300049572 Bacteria 2774
104 Ga0501038_0003013 3300049574 Bacteria 15705
105 Ga0501038_0087911 3300049574 Bacteria 2609
106 Ga0501039_0307190 3300049575 Bacteria 1247
107 Ga0501040_0088300 3300049576 Bacteria 2153
108 Ga0501042_0054941 3300049578 Bacteria 2841
109 Ga0501042_0159741 3300049578 Bacteria 1626
110 Ga0501046_0111348 3300049580 Bacteria 2091
111 Ga0501048_0103228 3300049582 Bacteria 2012
112 Ga0501048_0225040 3300049582 Bacteria 1331
113 Ga0501068_0192756 3300049584 Bacteria 1291
114 Ga0501070_0080100 3300049586 Bacteria 2702
115 Ga0501071_0097332 3300049587 Bacteria 2166
116 Ga0501072_0024592 3300049588 Bacteria 4687
117 Ga0501075_0021697 3300049591 Bacteria 4685
118 Ga0501075_0070584 3300049591 Bacteria 2639
119 Ga0501076_0105839 3300049592 Bacteria 2270
120 Ga0501077_0128975 3300049593 Bacteria 1603
121 Ga0501079_0311265 3300049741 Bacteria 1232
122 Ga0501081_0137014 3300049743 Bacteria 1753
123 Ga0501045_0083922 3300049824 Bacteria 2350
124 nmdc:mga00v17_126894_c1 3300050491 Bacteria 1628
125 nmdc:mga00v17_12710_c1 3300050491 Bacteria 4650
126 nmdc:mga00v17_177322_c1 3300050491 Bacteria 1375
127 nmdc:mga0yw44_1006_c1 3300050492 Bacteria 10784
128 nmdc:mga06z11_242621_c1 3300050494 Bacteria 1059
129 Ga0500616_0001830 3300053153 Bacteria 19275
130 Ga0500616_0007090 3300053153 Bacteria 7188
131 Ga0501084_0155110 3300054114 Bacteria 1931
132 Ga0501084_0225515 3300054114 Bacteria 1581
133 Ga0587084_001272 3300059477 Bacteria 2354
134 Ga0501082_0148467 3300060353 Bacteria 2036
135 Ga0501082_0191251 3300060353 Bacteria 1780
136 Ga0466962_0044395 3300061719 Bacteria 2126

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041509 Ga0451843_0383855 Ga0451843_0383855_427_1272 258
2 3300049575 Ga0501039_0307190 Ga0501039_0307190_316_1236 264
3 3300037312 Ga0395899_0049733 Ga0395899_0049733_2085_2918 268
4 3300037466 Ga0395898_0246278 Ga0395898_0246278_116_949 268
5 3300044656 Ga0466969_0056453 Ga0466969_0056453_724_1557 268
6 3300044684 Ga0466966_0311222 Ga0466966_0311222_74_907 268
7 3300044693 Ga0466961_0052878 Ga0466961_0052878_1720_2553 268
8 3300044694 Ga0466963_0005074 Ga0466963_0005074_761_1594 268
9 3300045049 Ga0466959_0098514 Ga0466959_0098514_363_1196 268
10 3300045836 Ga0466958_0029992 Ga0466958_0029992_200_1033 268
11 3300048917 Ga0496114_0037325 Ga0496114_0037325_697_1692 268
12 3300061719 Ga0466962_0044395 Ga0466962_0044395_955_1788 268
13 3300044693 Ga0466961_0140123 Ga0466961_0140123_635_1471 270
14 3300044694 Ga0466963_0050351 Ga0466963_0050351_1531_2367 270
15 3300044842 Ga0466957_0024587 Ga0466957_0024587_950_1786 270
16 3300045836 Ga0466958_0059783 Ga0466958_0059783_1406_2242 270
17 iso_pu_bacteria 2919391150 2919393265 271
18 iso_pu_bacteria 2945956166 2945958239 271
19 3300003373 JGI25407J50210_10009639 JGI25407J50210_100096391 272
20 3300005981 Ga0081538_10009963 Ga0081538_100099633 272
21 3300041509 Ga0451843_0989568 Ga0451843_0989568_72_920 274
22 3300049584 Ga0501068_0192756 Ga0501068_0192756_344_1264 274
23 3300049591 Ga0501075_0070584 Ga0501075_0070584_50_970 274
24 3300049593 Ga0501077_0128975 Ga0501077_0128975_315_1235 274
25 3300050492 nmdc:mga0yw44_1006_c1 nmdc:mga0yw44_1006_c1_9542_10534 274
26 3300050494 nmdc:mga06z11_242621_c1 nmdc:mga06z11_242621_c1_55_1047 274
27 3300053153 Ga0500616_0001830 Ga0500616_0001830_18138_18986 274
28 3300006042 Ga0075368_10008641 Ga0075368_100086413 275
29 3300031456 Ga0307513_10031441 Ga0307513_100314416 276
30 3300048922 Ga0496119_0005229 Ga0496119_0005229_6435_7415 277
31 3300049741 Ga0501079_0311265 Ga0501079_0311265_33_962 277
32 3300009036 Ga0105244_10024511 Ga0105244_100245112 278
33 3300044765 Ga0466970_0071741 Ga0466970_0071741_276_1307 279
34 3300013250 Ga0171462_1001 Ga0171462_100189 282
35 iso_pu_bacteria 8002775197 8002777291 282
36 3300053153 Ga0500616_0007090 Ga0500616_0007090_3484_4377 283
37 3300049572 Ga0501036_0079487 Ga0501036_0079487_470_1399 284
38 3300049576 Ga0501040_0088300 Ga0501040_0088300_571_1500 284
39 3300049578 Ga0501042_0054941 Ga0501042_0054941_1302_2231 284
40 3300049578 Ga0501042_0159741 Ga0501042_0159741_684_1616 284
41 3300049580 Ga0501046_0111348 Ga0501046_0111348_504_1433 284
42 3300049582 Ga0501048_0103228 Ga0501048_0103228_520_1449 284
43 3300049582 Ga0501048_0225040 Ga0501048_0225040_173_1105 284
44 3300049586 Ga0501070_0080100 Ga0501070_0080100_1427_2407 284
45 3300049587 Ga0501071_0097332 Ga0501071_0097332_1054_1983 284
46 3300049588 Ga0501072_0024592 Ga0501072_0024592_3208_4137 284
47 3300049591 Ga0501075_0021697 Ga0501075_0021697_1932_2861 284
48 3300049592 Ga0501076_0105839 Ga0501076_0105839_582_1511 284
49 3300049743 Ga0501081_0137014 Ga0501081_0137014_486_1418 284
50 3300049824 Ga0501045_0083922 Ga0501045_0083922_834_1763 284
51 3300054114 Ga0501084_0155110 Ga0501084_0155110_299_1231 284
52 3300054114 Ga0501084_0225515 Ga0501084_0225515_515_1444 284
53 3300060353 Ga0501082_0148467 Ga0501082_0148467_226_1158 284
54 3300060353 Ga0501082_0191251 Ga0501082_0191251_59_988 284
55 3300044735 Ga0466968_0019042 Ga0466968_0019042_1528_2559 285
56 3300005617 Ga0068859_100000155 Ga0068859_10000015563 286
57 3300005844 Ga0068862_100000009 Ga0068862_10000000976 286
58 3300006931 Ga0097620_100000155 Ga0097620_10000015563 286
59 3300009553 Ga0105249_10005869 Ga0105249_100058696 286
60 3300025961 Ga0207712_10006624 Ga0207712_100066243 286
61 3300028380 Ga0268265_10000050 Ga0268265_10000050116 286
62 3300048920 Ga0496117_0000028 Ga0496117_0000028_334874_335875 286
63 3300048920 Ga0496117_0018604 Ga0496117_0018604_2176_3168 286
64 3300048925 Ga0496122_0059309 Ga0496122_0059309_564_1556 286
65 3300048926 Ga0496123_0027408 Ga0496123_0027408_969_1961 286
66 3300050491 nmdc:mga00v17_12710_c1 nmdc:mga00v17_12710_c1_1510_2439 286
67 3300048917 Ga0496114_0043940 Ga0496114_0043940_829_1929 287
68 3300048922 Ga0496119_0004444 Ga0496119_0004444_1315_2316 287
69 3300048923 Ga0496120_0008919 Ga0496120_0008919_1249_2250 287
70 3300048925 Ga0496122_0040019 Ga0496122_0040019_1304_2305 287
71 3300048926 Ga0496123_0001962 Ga0496123_0001962_1238_2239 287
72 3300048928 Ga0496125_0002853 Ga0496125_0002853_1314_2315 287
73 3300048929 Ga0496126_0080912 Ga0496126_0080912_623_1624 287
74 3300048929 Ga0496126_0110020 Ga0496126_0110020_169_1113 288
75 3300013306 Ga0163162_10011031 Ga0163162_100110316 289
76 3300046453 Ga0495627_006338 Ga0495627_006338_1297_2241 289
77 3300048903 Ga0496100_0053201 Ga0496100_0053201_1045_2157 289
78 3300048904 Ga0496101_0005793 Ga0496101_0005793_6417_7529 289
79 3300048918 Ga0496115_0109277 Ga0496115_0109277_676_1788 289
80 3300048907 Ga0496104_0476523 Ga0496104_0476523_68_1075 290
81 3300048908 Ga0496105_0086750 Ga0496105_0086750_474_1460 290
82 3300048908 Ga0496105_0167608 Ga0496105_0167608_339_1451 290
83 3300048911 Ga0496108_0033600 Ga0496108_0033600_1593_2600 290
84 3300048911 Ga0496108_0235728 Ga0496108_0235728_262_1377 291
85 iso_pu_bacteria 2738541272 2738695839 291
86 iso_pu_bacteria 2738543027 2739327663 291
87 3300049574 Ga0501038_0087911 Ga0501038_0087911_70_1011 292
88 3300002738 JGI25154J39366_1002014 JGI25154J39366_10020144 293
89 3300025246 Ga0209646_1000098 Ga0209646_100009881 293
90 3300032004 Ga0307414_10374794 Ga0307414_103747941 293
91 3300048922 Ga0496119_0012973 Ga0496119_0012973_3117_4115 293
92 3300048923 Ga0496120_0002231 Ga0496120_0002231_6633_7631 293
93 3300049571 Ga0501034_0080691 Ga0501034_0080691_1491_2444 293
94 3300049574 Ga0501038_0003013 Ga0501038_0003013_8101_9054 293
95 3300059477 Ga0587084_001272 Ga0587084_001272_1260_2213 293
96 3300006051 Ga0075364_10146065 Ga0075364_101460651 295
97 3300031901 Ga0307406_10000263 Ga0307406_100002634 295
98 3300031901 Ga0307406_10002208 Ga0307406_100022088 295
99 3300046530 Ga0495654_0041793 Ga0495654_0041793_872_1861 295
100 3300050491 nmdc:mga00v17_126894_c1 nmdc:mga00v17_126894_c1_250_1194 295
101 3300050491 nmdc:mga00v17_177322_c1 nmdc:mga00v17_177322_c1_338_1321 295
102 iso_pu_bacteria 2585428157 2588106611 295
103 3300025972 Ga0207668_10347809 Ga0207668_103478092 296
104 3300031901 Ga0307406_10323597 Ga0307406_103235972 296
105 3300048910 Ga0496107_0006615 Ga0496107_0006615_828_1940 297
106 3300048925 Ga0496122_0072962 Ga0496122_0072962_693_1637 297
107 iso_pu_bacteria 2808606306 2808630967 297
108 3300048920 Ga0496117_0009549 Ga0496117_0009549_3999_4973 298
109 3300048921 Ga0496118_0041309 Ga0496118_0041309_814_1788 298
110 3300048922 Ga0496119_0009563 Ga0496119_0009563_455_1429 298
111 3300048925 Ga0496122_0024110 Ga0496122_0024110_217_1191 298
112 3300048926 Ga0496123_0000879 Ga0496123_0000879_40138_41112 298
113 3300048927 Ga0496124_0053741 Ga0496124_0053741_2277_3251 298
114 3300048927 Ga0496124_0144818 Ga0496124_0144818_590_1516 298
115 3300048929 Ga0496126_0033502 Ga0496126_0033502_2685_3659 298
116 iso_pu_bacteria 2908678064 2908678929 298
117 iso_pu_bacteria 2919395869 2919399144 298
118 3300048908 Ga0496105_0161968 Ga0496105_0161968_482_1408 299
119 3300048919 Ga0496116_0013619 Ga0496116_0013619_3574_4500 299
120 3300048921 Ga0496118_0010674 Ga0496118_0010674_790_1716 299
121 3300048922 Ga0496119_0030281 Ga0496119_0030281_193_1119 299
122 3300048923 Ga0496120_0003459 Ga0496120_0003459_1343_2269 299
123 3300048925 Ga0496122_0000055 Ga0496122_0000055_150418_151344 299
124 3300048926 Ga0496123_0000003 Ga0496123_0000003_767243_768169 299
125 3300048927 Ga0496124_0033778 Ga0496124_0033778_1164_2090 299
126 3300048928 Ga0496125_0007555 Ga0496125_0007555_10556_11482 299
127 3300048929 Ga0496126_0055490 Ga0496126_0055490_2614_3540 299
128 iso_pu_bacteria 2773857758 2774381459 299
129 iso_pu_bacteria 2904509784 2904509858 299
130 iso_pu_bacteria 2919069694 2919071277 299
131 iso_pu_bacteria 2977228692 2977230830 299
132 iso_pu_bacteria 2977236895 2977239627 299
133 iso_pu_bacteria 2984542743 2984546102 299
134 3300003578 Ga0006562J51391_1059014 Ga0006562J51391_105901412 300
135 3300046515 Ga0495620_0031156 Ga0495620_0031156_556_1551 300
136 iso_pu_bacteria 8004182704 8004185482 300
137 3300005288 Ga0065714_10109172 Ga0065714_101091722 302
138 3300005548 Ga0070665_100035818 Ga0070665_1000358182 302
139 3300014326 Ga0157380_10049396 Ga0157380_100493962 302
140 iso_pu_bacteria 2643221542 2643734017 302
141 iso_pu_bacteria 2643221630 2644170595 302
142 iso_pu_bacteria 2747842429 2747952909 302
143 iso_pu_bacteria 2852663356 2852664874 302
144 iso_pu_bacteria 2945968032 2945971462 302
145 iso_pu_bacteria 2946041624 2946043813 302
146 iso_pu_bacteria 2946080515 2946081293 302
147 3300045976 Ga0466967_0092035 Ga0466967_0092035_1411_2406 303
148 iso_pu_bacteria 2773857759 2774383547 303
149 iso_pu_bacteria 2857723135 2857723459 303
150 iso_pu_bacteria 2977251589 2977251951 303
151 3300031901 Ga0307406_10000115 Ga0307406_1000011522 304
152 3300049571 Ga0501034_0002252 Ga0501034_0002252_21436_22374 304
153 iso_pu_bacteria 2808606368 2808884903 305
154 iso_pu_bacteria 2643221724 2644679771 306
155 iso_pu_bacteria 2728369380 2730229296 306
156 iso_pu_bacteria 2833709550 2833710430 306
157 3300048920 Ga0496117_0000676 Ga0496117_0000676_16535_17482 307
158 3300048921 Ga0496118_0006370 Ga0496118_0006370_7559_8506 307
159 3300048925 Ga0496122_0006207 Ga0496122_0006207_7859_8806 307
160 3300048928 Ga0496125_0007769 Ga0496125_0007769_1937_2884 307
161 3300048928 Ga0496125_0011822 Ga0496125_0011822_6713_7660 307
162 3300048929 Ga0496126_0054086 Ga0496126_0054086_1368_2315 307
163 iso_pu_bacteria 2643221553 2643785416 307
164 iso_pu_bacteria 2643221575 2643888681 307
165 iso_pu_bacteria 2811994872 2812321921 307
166 iso_pu_bacteria 2870628048 2870629866 307
167 iso_pu_bacteria 2643221597 2643995257 310
168 iso_pu_bacteria 2757320536 2758224269 310
169 iso_pu_bacteria 2974294766 2974297880 310
170 iso_pu_bacteria 2974324384 2974325883 310
171 iso_pu_bacteria 8045830549 8045832537 310
172 3300044765 Ga0466970_0000429 Ga0466970_0000429_6159_7154 311
173 iso_pu_bacteria 2977264416 2977266059 311
174 iso_pu_bacteria 8016254467 8016254547 312
175 3300013102 Ga0157371_10138871 Ga0157371_101388712 313
176 3300001979 JGI24740J21852_10004213 JGI24740J21852_100042132 314
177 3300044683 Ga0466965_0106962 Ga0466965_0106962_246_1280 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03239

FTR1

Iron permease FTR1 family

1

207

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6peq-assembly1.cif.gz_F glua2 in complex with its auxiliary subunit cnih3 - map lbd-tmd-c3 - with antagonist zk200775 -without ntd 0.3915 64 198
6peq-assembly1.cif.gz_F glua2 in complex with its auxiliary subunit cnih3 - map lbd-tmd-c3 - with antagonist zk200775 -without ntd 0.3808 64 198
5k7v-assembly1.cif.gz_A computational design of self-assembling cyclic protein homooligomers 0.2666 8 198
1cnt-assembly2.cif.gz_2 ciliary neurotrophic factor 0.2612 31 199
6jx6-assembly1.cif.gz_A tetrameric form of smac 0.2519 42 200
ID Description Score Start End Superfamily
af_B7YZU1_345_528_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5057 3 196 1.20.1250.20
af_Q55EC8_162_384_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5054 3 196 1.20.1250.20
af_Q4CY86_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5015 2 196 1.20.1250.20
af_Q08299_62_277_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4909 2 202 1.20.1250.20
af_M0RA42_232_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4884 2 199 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2I0N3Z4-F1-model_v4 Iron transporter 0.9224 1 136 GO:0015093
GO:0033573
AF-A0A2I0N3Z4-F1-model_v4 Iron transporter 0.9098 1 136 GO:0015093
GO:0033573
AF-A0A842NN05-F1-model_v4 FTR1 family protein 0.8749 4 142 GO:0015093
GO:0033573
AF-A0A350USC6-F1-model_v4 Iron permease 0.8539 2 201 GO:0009055
GO:0015093
GO:0020037
GO:0033573
GO:0046872
AF-A0A543C5J2-F1-model_v4 deleted 0.843 2 146

Feature Viewer

pLDDT pTM Quality
72.45 0.66 Medium
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Predicted Structure (AlphaFold2)

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