F270875

General Info

Members Datasets Scaffolds Average Seq Length
177 108 354 451

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0021067|Ga0496115_0021067_2332_3915
Length 518
Sequence MHFDVLKIDRALVRRLERPDGDTLAASMIAMARAGHEGRGGRHRDCPADAAVEDAGPRRRLGARHGSASPNNFCEGGKMTKHYDLVAIGEQCRAVGWKVAVIDHLPFGGTCALRGCEPKKVLVSAAESIDYDRRMRSHGVIVGEPAIEWNALIKFKRSFTAPVPAMKEESFAENGIDGYHGRAKFCGPRAVQVAGEVLEGRFILLAVGAVPMHLGIPGQEHVITSTEFLDLDKLPKKIVLLGGGFIAAEFANIAALAGAQVTVIEQMDRMLTSFDPDLVGWLMEKFQAVGIELRLNTRVTAIEKYDGGFSVRTSSGERDEVVTADLVVHAAGRRPDLEPLDLAAAGVKSEQGRLQLNQFLQSVSNPAVYAVGDAALSGPPLTPVSNYDAKVAAANMINGNHAKPSYLGVPSVAFTIPPIASVGLGEKKALEMGLKFRMRSEKASNWYTARRVAETTYGFKVLVEETTGHILGAHLVGPHADEVINLFALAIRTGLTAEDLKAMIFAYPTGGSDIVDML

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
43 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
44 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
45 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
46 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
47 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
48 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
55 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
56 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
57 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
63 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
71 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
74 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
75 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
89 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
90 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
91 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
106 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
107 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
108 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.13
Rhizoplane 0.56
Rhizosphere 97.18
Stem 0
Stem Tuber 0
Unclassified 9.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0021067 3300048918 Bacteria 5030
2 Ga0070658_10010083 3300005327 Bacteria 7585
3 Ga0070714_100017378 3300005435 Bacteria 5826
4 Ga0070713_100254685 3300005436 Unclassified 1602
5 Ga0070694_100032842 3300005444 Bacteria 3410
6 Ga0070708_100000813 3300005445 Bacteria 23549
7 Ga0070708_100011615 3300005445 Bacteria 7168
8 Ga0070708_100063124 3300005445 Bacteria 3315
9 Ga0070685_10089890 3300005466 Archaea 1857
10 Ga0070706_100003503 3300005467 Bacteria 15423
11 Ga0070706_100012392 3300005467 Bacteria 7899
12 Ga0070706_100017167 3300005467 Bacteria 6685
13 Ga0070706_100028209 3300005467 Bacteria 5167
14 Ga0070706_100036446 3300005467 Bacteria 4543
15 Ga0070706_100097826 3300005467 Bacteria 2726
16 Ga0070706_100100809 3300005467 Unclassified 2683
17 Ga0070706_100117837 3300005467 Bacteria 2473
18 Ga0070706_100247000 3300005467 Bacteria 1666
19 Ga0070707_100042800 3300005468 Bacteria 4336
20 Ga0070707_100045768 3300005468 Bacteria 4187
21 Ga0070707_100095884 3300005468 Bacteria 2873
22 Ga0070707_100135591 3300005468 Bacteria 2395
23 Ga0070707_100152463 3300005468 Unclassified 2250
24 Ga0070707_100258456 3300005468 Bacteria 1694
25 Ga0070698_100003868 3300005471 Bacteria 16464
26 Ga0070698_100011111 3300005471 Bacteria 9567
27 Ga0070698_100050834 3300005471 Unclassified 4223
28 Ga0070698_100078522 3300005471 Bacteria 3299
29 Ga0070698_100112797 3300005471 Unclassified 2683
30 Ga0070698_100157392 3300005471 Bacteria 2217
31 Ga0070698_100229563 3300005471 Bacteria 1789
32 Ga0070699_100018916 3300005518 Bacteria 5923
33 Ga0070699_100033424 3300005518 Plasmid 4443
34 Ga0070699_100052148 3300005518 Bacteria 3541
35 Ga0070697_100012100 3300005536 Bacteria 6755
36 Ga0070697_100017351 3300005536 Bacteria 5662
37 Ga0070697_100041774 3300005536 Bacteria 3712
38 Ga0070697_100191678 3300005536 Bacteria 1735
39 Ga0070697_100237697 3300005536 Unclassified 1555
40 Ga0068855_100006552 3300005563 Bacteria 14153
41 Ga0068855_100156341 3300005563 Bacteria 2590
42 Ga0081540_1005341 3300005983 Bacteria 9611
43 Ga0081539_10003418 3300005985 Bacteria 19544
44 Ga0070717_10001796 3300006028 Bacteria 14972
45 Ga0070717_10007760 3300006028 Bacteria 7984
46 Ga0070717_10059612 3300006028 Bacteria 3159
47 Ga0070717_10062141 3300006028 Bacteria 3097
48 Ga0070717_10124842 3300006028 Bacteria 2209
49 Ga0075428_100001271 3300006844 Bacteria 26902
50 Ga0075428_100186606 3300006844 Archaea 2243
51 Ga0075428_100326475 3300006844 Archaea 1648
52 Ga0075430_100090301 3300006846 Bacteria 2563
53 Ga0075431_100003997 3300006847 Bacteria 14374
54 Ga0075433_10044618 3300006852 Bacteria 3852
55 Ga0075434_100005134 3300006871 Bacteria 11893
56 Ga0075429_100003877 3300006880 Bacteria 12779
57 Ga0075436_100070206 3300006914 Bacteria 2421
58 Ga0075435_100191263 3300007076 Bacteria 1732
59 Ga0099794_10020170 3300007265 Bacteria 3014
60 Ga0099794_10055072 3300007265 Bacteria 1921
61 Ga0105240_10001172 3300009093 Bacteria 45943
62 Ga0111539_10066642 3300009094 Archaea 4253
63 Ga0114129_10002958 3300009147 Bacteria 23770
64 Ga0114129_10124469 3300009147 Bacteria 3546
65 Ga0114129_10419514 3300009147 Unclassified 1760
66 Ga0105237_10058341 3300009545 Bacteria 3863
67 Ga0157370_10003880 3300013104 Bacteria 17418
68 Ga0157370_10165656 3300013104 Bacteria 2055
69 Ga0213872_10013340 3300021361 Bacteria 3852
70 Ga0213872_10016272 3300021361 Bacteria 3453
71 Ga0213876_10007860 3300021384 Bacteria 5786
72 Ga0207705_10000416 3300025909 Bacteria 37461
73 Ga0207684_10000321 3300025910 Bacteria 68294
74 Ga0207684_10001954 3300025910 Bacteria 21332
75 Ga0207684_10010530 3300025910 Bacteria 8129
76 Ga0207684_10010762 3300025910 Bacteria 8029
77 Ga0207684_10011722 3300025910 Bacteria 7647
78 Ga0207684_10027165 3300025910 Bacteria 4881
79 Ga0207684_10051890 3300025910 Bacteria 3480
80 Ga0207684_10098643 3300025910 Bacteria 2495
81 Ga0207684_10103431 3300025910 Bacteria 2435
82 Ga0207684_10151373 3300025910 Unclassified 1996
83 Ga0207695_10002211 3300025913 Bacteria 29270
84 Ga0207646_10005396 3300025922 Bacteria 13449
85 Ga0207646_10005983 3300025922 Bacteria 12685
86 Ga0207646_10007017 3300025922 Bacteria 11538
87 Ga0207646_10007102 3300025922 Bacteria 11455
88 Ga0207646_10016939 3300025922 Bacteria 6830
89 Ga0207646_10129112 3300025922 Bacteria 2274
90 Ga0207646_10163050 3300025922 Bacteria 2012
91 Ga0207646_10187826 3300025922 Bacteria 1866
92 Ga0207646_10225456 3300025922 Unclassified 1693
93 Ga0207667_10005398 3300025949 Bacteria 15587
94 Ga0207428_10069544 3300027907 Archaea 2768
95 Ga0307406_10044756 3300031901 Bacteria 2775
96 Ga0307407_10030357 3300031903 Unclassified 2915
97 Ga0307412_10104577 3300031911 Unclassified 2009
98 Ga0373934_0005670 3300035086 Archaea 4625
99 Ga0373923_0050528 3300035111 Archaea 1742
100 Ga0373954_0003504 3300035118 Archaea 6666
101 Ga0373956_0053069 3300035119 Archaea 1824
102 Ga0373957_0002822 3300035120 Archaea 5014
103 Ga0373924_0002233 3300035410 Archaea 6493
104 Ga0373933_0000053 3300035724 Archaea 69882
105 Ga0373937_0000678 3300036401 Archaea 29660
106 Ga0373925_0033764 3300037068 Archaea 3770
107 Ga0395900_0093936 3300037418 Bacteria 3081
108 Ga0395898_0008784 3300037466 Bacteria 10647
109 Ga0436365_1200929 3300039437 Bacteria 5802
110 Ga0436360_1079583 3300039438 Unclassified 1717
111 Ga0436360_1145260 3300039438 Bacteria 2214
112 Ga0436361_0261014 3300039447 Bacteria 8387
113 Ga0436361_0464343 3300039447 Bacteria 10637
114 Ga0436361_0703190 3300039447 Bacteria 2515
115 Ga0436361_0811371 3300039447 Bacteria 8327
116 Ga0436361_0822560 3300039447 Bacteria 3851
117 Ga0436362_1134680 3300039453 Bacteria 2322
118 Ga0450920_008355 3300042122 Archaea 1891
119 Ga0453683_0009864 3300044673 Bacteria 6361
120 Ga0453683_0025732 3300044673 Bacteria 3736
121 Ga0453684_0011292 3300044712 Bacteria 15025
122 Ga0451576_0051418 3300045051 Bacteria 4320
123 Ga0451576_0145767 3300045051 Bacteria 2468
124 Ga0495592_0002167 3300046454 Archaea 13833
125 Ga0495651_0012494 3300046462 Archaea 6549
126 Ga0495594_0017510 3300046499 Bacteria 3786
127 Ga0495628_0064043 3300046516 Archaea 2879
128 Ga0495652_0003979 3300046529 Archaea 14313
129 Ga0495587_0000873 3300046536 Archaea 19897
130 Ga0495645_0094977 3300046543 Archaea 2126
131 Ga0495622_0002666 3300046557 Bacteria 8570
132 Ga0495635_0049176 3300046663 Archaea 2906
133 Ga0495599_0001420 3300046678 Archaea 13707
134 Ga0495624_0013156 3300046690 Bacteria 5643
135 Ga0495600_0008992 3300046809 Archaea 6155
136 Ga0495581_0007994 3300047315 Bacteria 6127
137 Ga0495676_0134642 3300047321 Archaea 1779
138 Ga0495675_0021679 3300047444 Unclassified 4093
139 Ga0495602_0000051 3300048088 Archaea 113947
140 Ga0501291_004571 3300049514 Unclassified 1773
141 Ga0501038_0090533 3300049574 Bacteria 2564
142 Ga0501039_0164984 3300049575 Archaea 1741
143 Ga0501040_0100203 3300049576 Bacteria 2019
144 Ga0501041_0017330 3300049577 Bacteria 4286
145 Ga0501042_0002488 3300049578 Bacteria 11333
146 Ga0501047_0217564 3300049581 Bacteria 1767
147 Ga0501069_0207001 3300049585 Bacteria 1138
148 Ga0501071_0012916 3300049587 Archaea 5682
149 Ga0501072_0026450 3300049588 Archaea 4524
150 Ga0501074_0133816 3300049590 Bacteria 1773
151 Ga0501075_0010959 3300049591 Archaea 6394
152 Ga0501076_0021202 3300049592 Archaea 4982
153 Ga0501233_011668 3300049668 Unclassified 1752
154 Ga0501079_0069716 3300049741 Archaea 2714
155 Ga0501080_0194563 3300049742 Unclassified 1863
156 Ga0501081_0009303 3300049743 Bacteria 6401
157 Ga0501035_0256411 3300049822 Bacteria 1484
158 Ga0501045_0003770 3300049824 Bacteria 10420
159 Ga0501045_0025224 3300049824 Archaea 4272
160 nmdc:mga05p37_199639_c1 3300050507 Bacteria 2423
161 nmdc:mga05p37_5993_c1 3300050507 Bacteria 14311
162 nmdc:mga09592_30374_c1 3300050508 Bacteria 4496
163 nmdc:mga08y16_52542_c1 3300050511 Archaea 4263
164 nmdc:mga08y16_70706_c2 3300050511 Archaea 2329
165 nmdc:mga08y16_78392_c1 3300050511 Bacteria 3444
166 nmdc:mga0n895_5523_c1 3300050512 Bacteria 10586
167 nmdc:mga0rr50_202649_c1 3300050513 Bacteria 1631
168 nmdc:mga0rr50_51167_c1 3300050513 Bacteria 3064
169 nmdc:mga0a205_136331_c1 3300050515 Bacteria 2355
170 Ga0495619_0000072 3300053085 Archaea 79440
171 Ga0501084_0005849 3300054114 Archaea 10122
172 Ga0501082_0002429 3300060353 Bacteria 16353
173 Ga0530510_0001509 3300061734 Archaea 15649
174 Ga0530510_0031577 3300061734 Bacteria 3808
175 2842331962 2842324504 Bacteria 9364110
176 2842353808 2842348783 Bacteria 9002918
177 2911143315 2911138879 Bacteria 5811561
178 Ga0496115_0021067
179 Ga0070658_10010083
180 Ga0070714_100017378
181 Ga0070713_100254685
182 Ga0070694_100032842
183 Ga0070708_100000813
184 Ga0070708_100011615
185 Ga0070708_100063124
186 Ga0070685_10089890
187 Ga0070706_100003503
188 Ga0070706_100012392
189 Ga0070706_100017167
190 Ga0070706_100028209
191 Ga0070706_100036446
192 Ga0070706_100097826
193 Ga0070706_100100809
194 Ga0070706_100117837
195 Ga0070706_100247000
196 Ga0070707_100042800
197 Ga0070707_100045768
198 Ga0070707_100095884
199 Ga0070707_100135591
200 Ga0070707_100152463
201 Ga0070707_100258456
202 Ga0070698_100003868
203 Ga0070698_100011111
204 Ga0070698_100050834
205 Ga0070698_100078522
206 Ga0070698_100112797
207 Ga0070698_100157392
208 Ga0070698_100229563
209 Ga0070699_100018916
210 Ga0070699_100033424
211 Ga0070699_100052148
212 Ga0070697_100012100
213 Ga0070697_100017351
214 Ga0070697_100041774
215 Ga0070697_100191678
216 Ga0070697_100237697
217 Ga0068855_100006552
218 Ga0068855_100156341
219 Ga0081540_1005341
220 Ga0081539_10003418
221 Ga0070717_10001796
222 Ga0070717_10007760
223 Ga0070717_10059612
224 Ga0070717_10062141
225 Ga0070717_10124842
226 Ga0075428_100001271
227 Ga0075428_100186606
228 Ga0075428_100326475
229 Ga0075430_100090301
230 Ga0075431_100003997
231 Ga0075433_10044618
232 Ga0075434_100005134
233 Ga0075429_100003877
234 Ga0075436_100070206
235 Ga0075435_100191263
236 Ga0099794_10020170
237 Ga0099794_10055072
238 Ga0105240_10001172
239 Ga0111539_10066642
240 Ga0114129_10002958
241 Ga0114129_10124469
242 Ga0114129_10419514
243 Ga0105237_10058341
244 Ga0157370_10003880
245 Ga0157370_10165656
246 Ga0213872_10013340
247 Ga0213872_10016272
248 Ga0213876_10007860
249 Ga0207705_10000416
250 Ga0207684_10000321
251 Ga0207684_10001954
252 Ga0207684_10010530
253 Ga0207684_10010762
254 Ga0207684_10011722
255 Ga0207684_10027165
256 Ga0207684_10051890
257 Ga0207684_10098643
258 Ga0207684_10103431
259 Ga0207684_10151373
260 Ga0207695_10002211
261 Ga0207646_10005396
262 Ga0207646_10005983
263 Ga0207646_10007017
264 Ga0207646_10007102
265 Ga0207646_10016939
266 Ga0207646_10129112
267 Ga0207646_10163050
268 Ga0207646_10187826
269 Ga0207646_10225456
270 Ga0207667_10005398
271 Ga0207428_10069544
272 Ga0307406_10044756
273 Ga0307407_10030357
274 Ga0307412_10104577
275 Ga0373934_0005670
276 Ga0373923_0050528
277 Ga0373954_0003504
278 Ga0373956_0053069
279 Ga0373957_0002822
280 Ga0373924_0002233
281 Ga0373933_0000053
282 Ga0373937_0000678
283 Ga0373925_0033764
284 Ga0395900_0093936
285 Ga0395898_0008784
286 Ga0436365_1200929
287 Ga0436360_1079583
288 Ga0436360_1145260
289 Ga0436361_0261014
290 Ga0436361_0464343
291 Ga0436361_0703190
292 Ga0436361_0811371
293 Ga0436361_0822560
294 Ga0436362_1134680
295 Ga0450920_008355
296 Ga0453683_0009864
297 Ga0453683_0025732
298 Ga0453684_0011292
299 Ga0451576_0051418
300 Ga0451576_0145767
301 Ga0495592_0002167
302 Ga0495651_0012494
303 Ga0495594_0017510
304 Ga0495628_0064043
305 Ga0495652_0003979
306 Ga0495587_0000873
307 Ga0495645_0094977
308 Ga0495622_0002666
309 Ga0495635_0049176
310 Ga0495599_0001420
311 Ga0495624_0013156
312 Ga0495600_0008992
313 Ga0495581_0007994
314 Ga0495676_0134642
315 Ga0495675_0021679
316 Ga0495602_0000051
317 Ga0501291_004571
318 Ga0501038_0090533
319 Ga0501039_0164984
320 Ga0501040_0100203
321 Ga0501041_0017330
322 Ga0501042_0002488
323 Ga0501047_0217564
324 Ga0501069_0207001
325 Ga0501071_0012916
326 Ga0501072_0026450
327 Ga0501074_0133816
328 Ga0501075_0010959
329 Ga0501076_0021202
330 Ga0501233_011668
331 Ga0501079_0069716
332 Ga0501080_0194563
333 Ga0501081_0009303
334 Ga0501035_0256411
335 Ga0501045_0003770
336 Ga0501045_0025224
337 nmdc:mga05p37_199639_c1
338 nmdc:mga05p37_5993_c1
339 nmdc:mga09592_30374_c1
340 nmdc:mga08y16_52542_c1
341 nmdc:mga08y16_70706_c2
342 nmdc:mga08y16_78392_c1
343 nmdc:mga0n895_5523_c1
344 nmdc:mga0rr50_202649_c1
345 nmdc:mga0rr50_51167_c1
346 nmdc:mga0a205_136331_c1
347 Ga0495619_0000072
348 Ga0501084_0005849
349 Ga0501082_0002429
350 Ga0530510_0001509
351 Ga0530510_0031577
352 2842331962
353 2842353808
354 2911143315

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

409

518

0.96

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

237

318

0.94

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

86

389

0.91

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

186

372

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mig-assembly1.cif.gz_B pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type 0.9907 5 35
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9472 5 41
7kmy-assembly4.cif.gz_M structure of mtb lpd bound to 010705 0.9379 1 448
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9345 1 445
7kmy-assembly4.cif.gz_M structure of mtb lpd bound to 010705 0.9339 1 448
ID Description Score Start End Superfamily
af_P09833_289_351_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9561 228 255 2.40.50.100
af_I1LIA8_18_345_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9501 6 39 3.50.50.60
af_A0A1D6HP35_184_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9453 152 271 3.50.50.60
af_P77212_327_440_3.30.390.30 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9453 341 448 3.30.390.30
af_Q2G0I4_328_439_3.30.390.30 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9445 341 448 3.30.390.30
ID Description Score Start End GO Terms
AF-Q0G2J9-F1-model_v4 Regulatory protein 0.9893 1 449 GO:0000166
GO:0016491
AF-A0A1X0T3P2-F1-model_v4 Pyridine nucleotide-disulfide oxidoreductase dimerization region 0.989 53 449 GO:0016491
AF-A0A2N3B977-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9888 1 268 GO:0016491
AF-A0A2D8W4F3-F1-model_v4 deleted 0.9881 1 397
AF-Q0G2J9-F1-model_v4 Regulatory protein 0.9871 1 449 GO:0000166
GO:0016491

Map