F270564

General Info

Members Datasets Scaffolds Average Seq Length
177 76 354 346

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0149139|Ga0316582_0149139_176_1324
Length 382
Sequence MPNSLFVLEQALYEYDERCVKGCSTTVSQTNLGVKMIEVMDRMKMSGVSMEENNKSEQGALLSINDLHVWYELRRFGFGHAGYVKAVDGVSFEMAPGETVAVVGESGCGKSSLMKTILGLNIPTKGEIIFDGKNLSDLKRRELRAYRFEVGYVQQDPYGALPPFMSVQKILEEPLLISGLRNKEERLSRIRKVMDEVKLYPADDFLPKFPHMLSGGQQQRVVIARAMLRDPKLIVADEPVSMLDASVRVEILKLMHALQSEHHLSVIYITHDLSTVKYFSARIFVMYAGNLVEKAATRRLLANPLHPYTHALLAATSDPDARNADTFKEVPPGEPPSLVKPPPGCRFHPRCAQAIIGVCDVQEPPDFEPEPGHQVACWLYDD

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
36 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
50 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
55 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
63 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
65 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
66 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
67 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
68 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
71 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
72 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
73 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
74 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
75 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
76 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.56
Rhizosphere 98.31
Stem 0
Stem Tuber 0
Unclassified 5.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0149139 3300036647 Bacteria 1580
2 JGI25406J46586_10024011 3300003203 Bacteria 2398
3 JGI25406J46586_10024262 3300003203 Bacteria 2381
4 Ga0065707_10126625 3300005295 Bacteria 1999
5 Ga0070706_100262517 3300005467 Bacteria 1612
6 Ga0070698_100044835 3300005471 Bacteria 4526
7 Ga0070698_100197122 3300005471 Bacteria 1950
8 Ga0070699_100000855 3300005518 Bacteria 28296
9 Ga0070699_100252276 3300005518 Bacteria 1576
10 Ga0070695_100105975 3300005545 Bacteria 1900
11 Ga0070695_100297001 3300005545 Bacteria 1193
12 Ga0070704_100037216 3300005549 Bacteria 3322
13 Ga0068857_100099771 3300005577 Bacteria 2605
14 Ga0068861_100229698 3300005719 Bacteria 1573
15 Ga0068870_10102835 3300005840 Bacteria 1618
16 Ga0068860_100284692 3300005843 Bacteria 1616
17 Ga0081540_1002231 3300005983 Bacteria 15956
18 Ga0081539_10002072 3300005985 Bacteria 30021
19 Ga0075428_100001971 3300006844 Bacteria 22113
20 Ga0075428_100011271 3300006844 Bacteria 9944
21 Ga0075428_100046686 3300006844 Bacteria 4756
22 Ga0075428_100344146 3300006844 Bacteria 1601
23 Ga0075430_100020735 3300006846 Bacteria 5591
24 Ga0075431_100036186 3300006847 Bacteria 5085
25 Ga0075431_100183209 3300006847 Bacteria 2149
26 Ga0075429_100001001 3300006880 Bacteria 22459
27 Ga0075429_100003586 3300006880 Bacteria 13225
28 Ga0075429_100013801 3300006880 Bacteria 7006
29 Ga0075429_100129075 3300006880 Bacteria 2211
30 Ga0075429_100183711 3300006880 Bacteria 1832
31 Ga0075429_100255998 3300006880 Bacteria 1533
32 Ga0075436_100000566 3300006914 Bacteria 24123
33 Ga0097620_100045167 3300006931 Bacteria 4426
34 Ga0099794_10017088 3300007265 Bacteria 3229
35 Ga0111539_10003834 3300009094 Bacteria 19801
36 Ga0114129_10000057 3300009147 Bacteria 99258
37 Ga0114129_10000845 3300009147 Bacteria 39637
38 Ga0114129_10005482 3300009147 Bacteria 17933
39 Ga0114129_10019501 3300009147 Bacteria 9657
40 Ga0114129_10071083 3300009147 Bacteria 4852
41 Ga0114129_10111890 3300009147 Bacteria 3767
42 Ga0114129_10228050 3300009147 Bacteria 2509
43 Ga0105243_10109008 3300009148 Bacteria 2312
44 Ga0105249_10085664 3300009553 Bacteria 2937
45 Ga0105246_10057617 3300011119 Bacteria 2689
46 Ga0207653_10027926 3300025885 Bacteria 1812
47 Ga0207646_10267014 3300025922 Bacteria 1547
48 Ga0207670_10057630 3300025936 Bacteria 2635
49 Ga0207712_10145381 3300025961 Bacteria 1825
50 Ga0207674_10059805 3300026116 Bacteria 3855
51 Ga0207675_100045064 3300026118 Bacteria 4121
52 Ga0207428_10001620 3300027907 Bacteria 23375
53 Ga0265323_10052629 3300028653 Unclassified 1440
54 Ga0265322_10007323 3300028654 Unclassified 3227
55 Ga0265328_10024115 3300031239 Bacteria 2301
56 Ga0265320_10039884 3300031240 Bacteria 2345
57 Ga0265325_10088011 3300031241 Bacteria 1535
58 Ga0265340_10012624 3300031247 Bacteria 4459
59 Ga0265331_10016371 3300031250 Bacteria 3894
60 Ga0265316_10020385 3300031344 Bacteria 5644
61 Ga0316579_10026907 3300031691 Bacteria 2608
62 Ga0316579_10038130 3300031691 Bacteria 2221
63 Ga0316579_10099520 3300031691 Bacteria 1392
64 Ga0316576_10002867 3300031727 Bacteria 9946
65 Ga0316576_10033518 3300031727 Bacteria 3657
66 Ga0316576_10100762 3300031727 Bacteria 2159
67 Ga0316576_10150433 3300031727 Bacteria 1754
68 Ga0316576_10173077 3300031727 Bacteria 1629
69 Ga0316578_10014589 3300031728 Bacteria 4203
70 Ga0316578_10018061 3300031728 Bacteria 3855
71 Ga0316578_10072457 3300031728 Unclassified 2040
72 Ga0316578_10150092 3300031728 Bacteria 1404
73 Ga0316578_10181475 3300031728 Unclassified 1268
74 Ga0316577_10039430 3300031733 Bacteria 2642
75 Ga0316577_10041329 3300031733 Bacteria 2579
76 Ga0316577_10042959 3300031733 Bacteria 2529
77 Ga0307410_10118883 3300031852 Bacteria 1924
78 Ga0307407_10048445 3300031903 Bacteria 2419
79 Ga0307416_100327646 3300032002 Bacteria 1537
80 Ga0316585_10013022 3300032137 Bacteria 2473
81 Ga0316585_10046171 3300032137 Unclassified 1394
82 Ga0316593_10000453 3300032168 Bacteria 7506
83 Ga0316574_0010175 3300035398 Bacteria 5301
84 Ga0316574_0037656 3300035398 Bacteria 2967
85 Ga0316574_0058320 3300035398 Bacteria 2418
86 Ga0316582_0007089 3300036647 Bacteria 5952
87 Ga0316582_0062123 3300036647 Bacteria 2398
88 Ga0316582_0070605 3300036647 Unclassified 2260
89 Ga0316584_0001693 3300036712 Bacteria 13503
90 Ga0316584_0018077 3300036712 Bacteria 5083
91 Ga0316584_0049311 3300036712 Bacteria 3147
92 Ga0316584_0052900 3300036712 Bacteria 3037
93 Ga0316584_0060489 3300036712 Bacteria 2837
94 Ga0316584_0061966 3300036712 Bacteria 2801
95 Ga0316584_0082093 3300036712 Unclassified 2414
96 Ga0316584_0122645 3300036712 Bacteria 1941
97 Ga0316584_0131038 3300036712 Bacteria 1873
98 Ga0316584_0131242 3300036712 Bacteria 1871
99 Ga0316584_0135520 3300036712 Bacteria 1838
100 Ga0395898_0078433 3300037466 Bacteria 3187
101 Ga0316581_0005756 3300037588 Bacteria 3249
102 Ga0316581_0014312 3300037588 Bacteria 2257
103 Ga0400489_03878 3300039093 Bacteria 48044
104 Ga0436365_0258167 3300039437 Bacteria 6704
105 Ga0439458_0009420 3300042157 Bacteria 2173
106 Ga0451577_0005501 3300042876 Bacteria 12953
107 Ga0451577_0021607 3300042876 Bacteria 5887
108 Ga0451577_0332006 3300042876 Bacteria 1379
109 Ga0453683_0001869 3300044673 Bacteria 17259
110 Ga0453683_0002565 3300044673 Bacteria 14005
111 Ga0453683_0002728 3300044673 Bacteria 13476
112 Ga0453683_0010117 3300044673 Bacteria 6264
113 Ga0453683_0034976 3300044673 Bacteria 3167
114 Ga0453683_0248131 3300044673 Bacteria 1134
115 Ga0453684_0000012 3300044712 Bacteria 1062512
116 Ga0453684_0000958 3300044712 Bacteria 94987
117 Ga0453684_0000962 3300044712 Bacteria 94884
118 Ga0453684_0001309 3300044712 Bacteria 73549
119 Ga0453684_0001447 3300044712 Bacteria 67554
120 Ga0453684_0002412 3300044712 Bacteria 45540
121 Ga0453684_0002646 3300044712 Bacteria 42771
122 Ga0453684_0002963 3300044712 Bacteria 39748
123 Ga0453684_0004582 3300044712 Bacteria 28827
124 Ga0453684_0009775 3300044712 Bacteria 16651
125 Ga0453684_0018810 3300044712 Bacteria 10571
126 Ga0453684_0019212 3300044712 Bacteria 10419
127 Ga0453684_0020451 3300044712 Bacteria 9980
128 Ga0453684_0037329 3300044712 Bacteria 6670
129 Ga0453684_0039977 3300044712 Bacteria 6378
130 Ga0453684_0052699 3300044712 Bacteria 5318
131 Ga0453684_0064935 3300044712 Unclassified 4658
132 Ga0453684_0078716 3300044712 Unclassified 4124
133 Ga0453684_0093994 3300044712 Bacteria 3691
134 Ga0453684_0107540 3300044712 Bacteria 3396
135 Ga0453684_0108938 3300044712 Bacteria 3371
136 Ga0453684_0149375 3300044712 Bacteria 2779
137 Ga0453684_0263179 3300044712 Bacteria 1974
138 Ga0453684_0265846 3300044712 Bacteria 1963
139 Ga0453684_0289136 3300044712 Bacteria 1867
140 Ga0453684_0513437 3300044712 Bacteria 1325
141 Ga0451576_0000322 3300045051 Bacteria 116299
142 Ga0451576_0023243 3300045051 Bacteria 6714
143 Ga0451576_0034040 3300045051 Bacteria 5413
144 Ga0451576_0083871 3300045051 Bacteria 3315
145 Ga0451576_0094030 3300045051 Bacteria 3117
146 Ga0496106_0383808 3300048909 Bacteria 1129
147 Ga0501040_0225208 3300049576 Bacteria 1335
148 Ga0501067_0001435 3300049583 Bacteria 12943
149 Ga0501072_0297130 3300049588 Bacteria 1284
150 Ga0501075_0017302 3300049591 Bacteria 5206
151 Ga0501075_0071584 3300049591 Bacteria 2621
152 Ga0501075_0115457 3300049591 Bacteria 2041
153 Ga0501076_0036010 3300049592 Bacteria 3876
154 Ga0501076_0102508 3300049592 Bacteria 2307
155 Ga0501079_0078639 3300049741 Bacteria 2551
156 Ga0501080_0037378 3300049742 Bacteria 4535
157 nmdc:mga05p37_245476_c1 3300050507 Bacteria 2150
158 nmdc:mga05p37_269769_c1 3300050507 Bacteria 2034
159 nmdc:mga05p37_35052_c1 3300050507 Bacteria 6152
160 nmdc:mga05p37_58337_c1 3300050507 Bacteria 4754
161 nmdc:mga05p37_65980_c1 3300050507 Bacteria 4453
162 nmdc:mga05p37_82064_c1 3300050507 Bacteria 3972
163 nmdc:mga05p37_85482_c1 3300050507 Bacteria 3887
164 nmdc:mga05p37_907_c1 3300050507 Bacteria 33466
165 nmdc:mga09592_16100_c1 3300050508 Bacteria 6111
166 nmdc:mga09592_210772_c1 3300050508 Bacteria 1683
167 nmdc:mga09592_23400_c1 3300050508 Bacteria 5103
168 nmdc:mga09592_312860_c1 3300050508 Bacteria 1361
169 nmdc:mga09592_3512_c1 3300050508 Bacteria 12667
170 nmdc:mga09592_734_c1 3300050508 Bacteria 25253
171 nmdc:mga0qj67_72205_c1 3300050509 Bacteria 2755
172 nmdc:mga06r32_1172_c1 3300050510 Bacteria 23613
173 nmdc:mga06r32_172129_c1 3300050510 Bacteria 2149
174 nmdc:mga06r32_32565_c1 3300050510 Bacteria 4905
175 nmdc:mga08y16_410_c1 3300050511 Bacteria 39418
176 nmdc:mga08x19_451_c1 3300050514 Bacteria 27989
177 Ga0501082_0156368 3300060353 Bacteria 1981
178 Ga0316582_0149139
179 JGI25406J46586_10024011
180 JGI25406J46586_10024262
181 Ga0065707_10126625
182 Ga0070706_100262517
183 Ga0070698_100044835
184 Ga0070698_100197122
185 Ga0070699_100000855
186 Ga0070699_100252276
187 Ga0070695_100105975
188 Ga0070695_100297001
189 Ga0070704_100037216
190 Ga0068857_100099771
191 Ga0068861_100229698
192 Ga0068870_10102835
193 Ga0068860_100284692
194 Ga0081540_1002231
195 Ga0081539_10002072
196 Ga0075428_100001971
197 Ga0075428_100011271
198 Ga0075428_100046686
199 Ga0075428_100344146
200 Ga0075430_100020735
201 Ga0075431_100036186
202 Ga0075431_100183209
203 Ga0075429_100001001
204 Ga0075429_100003586
205 Ga0075429_100013801
206 Ga0075429_100129075
207 Ga0075429_100183711
208 Ga0075429_100255998
209 Ga0075436_100000566
210 Ga0097620_100045167
211 Ga0099794_10017088
212 Ga0111539_10003834
213 Ga0114129_10000057
214 Ga0114129_10000845
215 Ga0114129_10005482
216 Ga0114129_10019501
217 Ga0114129_10071083
218 Ga0114129_10111890
219 Ga0114129_10228050
220 Ga0105243_10109008
221 Ga0105249_10085664
222 Ga0105246_10057617
223 Ga0207653_10027926
224 Ga0207646_10267014
225 Ga0207670_10057630
226 Ga0207712_10145381
227 Ga0207674_10059805
228 Ga0207675_100045064
229 Ga0207428_10001620
230 Ga0265323_10052629
231 Ga0265322_10007323
232 Ga0265328_10024115
233 Ga0265320_10039884
234 Ga0265325_10088011
235 Ga0265340_10012624
236 Ga0265331_10016371
237 Ga0265316_10020385
238 Ga0316579_10026907
239 Ga0316579_10038130
240 Ga0316579_10099520
241 Ga0316576_10002867
242 Ga0316576_10033518
243 Ga0316576_10100762
244 Ga0316576_10150433
245 Ga0316576_10173077
246 Ga0316578_10014589
247 Ga0316578_10018061
248 Ga0316578_10072457
249 Ga0316578_10150092
250 Ga0316578_10181475
251 Ga0316577_10039430
252 Ga0316577_10041329
253 Ga0316577_10042959
254 Ga0307410_10118883
255 Ga0307407_10048445
256 Ga0307416_100327646
257 Ga0316585_10013022
258 Ga0316585_10046171
259 Ga0316593_10000453
260 Ga0316574_0010175
261 Ga0316574_0037656
262 Ga0316574_0058320
263 Ga0316582_0007089
264 Ga0316582_0062123
265 Ga0316582_0070605
266 Ga0316584_0001693
267 Ga0316584_0018077
268 Ga0316584_0049311
269 Ga0316584_0052900
270 Ga0316584_0060489
271 Ga0316584_0061966
272 Ga0316584_0082093
273 Ga0316584_0122645
274 Ga0316584_0131038
275 Ga0316584_0131242
276 Ga0316584_0135520
277 Ga0395898_0078433
278 Ga0316581_0005756
279 Ga0316581_0014312
280 Ga0400489_03878
281 Ga0436365_0258167
282 Ga0439458_0009420
283 Ga0451577_0005501
284 Ga0451577_0021607
285 Ga0451577_0332006
286 Ga0453683_0001869
287 Ga0453683_0002565
288 Ga0453683_0002728
289 Ga0453683_0010117
290 Ga0453683_0034976
291 Ga0453683_0248131
292 Ga0453684_0000012
293 Ga0453684_0000958
294 Ga0453684_0000962
295 Ga0453684_0001309
296 Ga0453684_0001447
297 Ga0453684_0002412
298 Ga0453684_0002646
299 Ga0453684_0002963
300 Ga0453684_0004582
301 Ga0453684_0009775
302 Ga0453684_0018810
303 Ga0453684_0019212
304 Ga0453684_0020451
305 Ga0453684_0037329
306 Ga0453684_0039977
307 Ga0453684_0052699
308 Ga0453684_0064935
309 Ga0453684_0078716
310 Ga0453684_0093994
311 Ga0453684_0107540
312 Ga0453684_0108938
313 Ga0453684_0149375
314 Ga0453684_0263179
315 Ga0453684_0265846
316 Ga0453684_0289136
317 Ga0453684_0513437
318 Ga0451576_0000322
319 Ga0451576_0023243
320 Ga0451576_0034040
321 Ga0451576_0083871
322 Ga0451576_0094030
323 Ga0496106_0383808
324 Ga0501040_0225208
325 Ga0501067_0001435
326 Ga0501072_0297130
327 Ga0501075_0017302
328 Ga0501075_0071584
329 Ga0501075_0115457
330 Ga0501076_0036010
331 Ga0501076_0102508
332 Ga0501079_0078639
333 Ga0501080_0037378
334 nmdc:mga05p37_245476_c1
335 nmdc:mga05p37_269769_c1
336 nmdc:mga05p37_35052_c1
337 nmdc:mga05p37_58337_c1
338 nmdc:mga05p37_65980_c1
339 nmdc:mga05p37_82064_c1
340 nmdc:mga05p37_85482_c1
341 nmdc:mga05p37_907_c1
342 nmdc:mga09592_16100_c1
343 nmdc:mga09592_210772_c1
344 nmdc:mga09592_23400_c1
345 nmdc:mga09592_312860_c1
346 nmdc:mga09592_3512_c1
347 nmdc:mga09592_734_c1
348 nmdc:mga0qj67_72205_c1
349 nmdc:mga06r32_1172_c1
350 nmdc:mga06r32_172129_c1
351 nmdc:mga06r32_32565_c1
352 nmdc:mga08y16_410_c1
353 nmdc:mga08x19_451_c1
354 Ga0501082_0156368

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

87

241

0.94

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

292

359

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.94 7 240
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9385 4 256
5lj9-assembly3.cif.gz_C structure of the e. coli macb abc domain (c2221) 0.938 4 240
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9374 4 238
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.937 4 256
ID Description Score Start End Superfamily
af_P77268_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9686 4 321 3.40.50.300
af_Q2FZR1_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9643 4 321 3.40.50.300
af_Q2FZR5_3_331_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9635 4 324 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9582 4 334 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9526 4 334 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6G2QKZ1-F1-model_v4 ATP-binding cassette domain-containing protein 0.9703 4 256 GO:0005524
GO:0016887
AF-A0A3D9GTG5-F1-model_v4 Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein 0.9698 4 321 GO:0005524
GO:0015833
GO:0016887
AF-K2M8W4-F1-model_v4 Oligopeptide ABC transporter ATP-binding protein 0.9687 28 321 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A537WAU2-F1-model_v4 ABC transporter ATP-binding protein 0.9684 25 262 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A2A3BWF3-F1-model_v4 deleted 0.9676 5 263

Map