F269222

General Info

Members Datasets Scaffolds Average Seq Length
176 128 352 319

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2884693830|2884701141
Length 368
Sequence HYQDPFEQTSQPYQQQPQHSEQSYQQPPQHAEQSYPQHHAELSYQQQPQQQSAQLAGQFSQRFQLLATNIERIIRGKHEAIELALICLFSEGHLLVEDVPGTGKTTLARSVAASVDAEWRRIQFTPDLLPSDITGVSIFNQAHQKFEFHHGPVFANIVLADEINRASPKTQAALLEVMEERRVTVDAEPHPVPRPFLVVATQNPVDMDGTYLLPEAQLDRFLMKISVGYPDHVSEVEVLKGMPTGPQVERLPVVARASDVSGMIDFASRIHVADPVYDYIVALCAATRTSPHLKLGASPRGSLALLRAARVKAAAAGRHYVVPEDVKALAVPVLAHRLILTPEAELREVTAAAALGEILAGMPVPQAA

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
3 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
49 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
50 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
56 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
59 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
62 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
63 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
64 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
72 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
73 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
93 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
99 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
100 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
116 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
117 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
118 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
121 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
122 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
123 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
124 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
125 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
126 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
127 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
128 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.02
Metatranscriptomes 0
Isolates 3.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.82
Nodule 0
Rhizoplane 1.7
Rhizosphere 79.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10000218 3300005434 Bacteria 37188
2 Ga0070710_10000182 3300005437 Bacteria 29036
3 Ga0070711_100294121 3300005439 Bacteria 1289
4 Ga0070694_100000282 3300005444 Bacteria 27232
5 Ga0070708_100005173 3300005445 Bacteria 10327
6 Ga0070708_100041832 3300005445 Bacteria 4019
7 Ga0070706_100005325 3300005467 Bacteria 12255
8 Ga0070706_100068474 3300005467 Bacteria 3282
9 Ga0070707_100002466 3300005468 Bacteria 17625
10 Ga0070707_100032278 3300005468 Bacteria 4988
11 Ga0070707_100297818 3300005468 Bacteria 1567
12 Ga0070698_100002035 3300005471 Bacteria 22482
13 Ga0070698_100011273 3300005471 Bacteria 9493
14 Ga0070698_100067470 3300005471 Bacteria 3597
15 Ga0070698_100081862 3300005471 Bacteria 3221
16 Ga0070699_100003730 3300005518 Bacteria 13446
17 Ga0070699_100008419 3300005518 Bacteria 8934
18 Ga0070699_100019667 3300005518 Bacteria 5818
19 Ga0070699_100220805 3300005518 Bacteria 1689
20 Ga0070697_100026281 3300005536 Bacteria 4648
21 Ga0070704_100054449 3300005549 Bacteria 2831
22 Ga0068855_100055106 3300005563 Bacteria 4671
23 Ga0068863_100025997 3300005841 Bacteria 5585
24 Ga0068860_100222708 3300005843 Bacteria 1832
25 Ga0081455_10098785 3300005937 Bacteria 2349
26 Ga0081538_10004917 3300005981 Bacteria 12172
27 Ga0075365_10028488 3300006038 Bacteria 3563
28 Ga0075364_10003910 3300006051 Bacteria 8541
29 Ga0070712_100016028 3300006175 Bacteria 4835
30 Ga0075367_10111563 3300006178 Bacteria 1679
31 Ga0075367_10145603 3300006178 Bacteria 1469
32 Ga0075433_10015406 3300006852 Bacteria 6270
33 Ga0075433_10248539 3300006852 Bacteria 1578
34 Ga0075434_100025447 3300006871 Bacteria 5791
35 Ga0075435_100002318 3300007076 Bacteria 12589
36 Ga0114129_10080803 3300009147 Bacteria 4518
37 Ga0157378_10238633 3300013297 Bacteria 1736
38 Ga0163162_10723583 3300013306 Bacteria 1116
39 Ga0207653_10023361 3300025885 Bacteria 1969
40 Ga0207692_10000288 3300025898 Bacteria 17412
41 Ga0207684_10003256 3300025910 Bacteria 15933
42 Ga0207684_10004209 3300025910 Bacteria 13656
43 Ga0207684_10008507 3300025910 Bacteria 9130
44 Ga0207684_10053583 3300025910 Bacteria 3423
45 Ga0207693_10032276 3300025915 Bacteria 4133
46 Ga0207663_10130981 3300025916 Bacteria 1733
47 Ga0207646_10003963 3300025922 Bacteria 16424
48 Ga0207646_10115352 3300025922 Bacteria 2412
49 Ga0207650_10273963 3300025925 Bacteria 1372
50 Ga0207709_10063444 3300025935 Bacteria 2316
51 Ga0207670_10198291 3300025936 Bacteria 1523
52 Ga0207689_10069381 3300025942 Bacteria 2896
53 Ga0207678_10236676 3300026067 Bacteria 1564
54 Ga0207708_10069724 3300026075 Bacteria 2692
55 Ga0207641_10197406 3300026088 Bacteria 1853
56 Ga0207675_100022757 3300026118 Bacteria 5832
57 Ga0209588_1017094 3300027671 Bacteria 2245
58 Ga0268264_10214376 3300028381 Bacteria 1769
59 Ga0307517_10004091 3300028786 Bacteria 22505
60 Ga0265338_10089722 3300028800 Bacteria 2547
61 Ga0307508_10020066 3300031616 Bacteria 6070
62 Ga0307508_10069422 3300031616 Bacteria 3095
63 Ga0316576_10000196 3300031727 Bacteria 25243
64 Ga0316576_10064999 3300031727 Bacteria 2680
65 Ga0316578_10014185 3300031728 Bacteria 4249
66 Ga0307516_10105109 3300031730 Bacteria 2635
67 Ga0307415_100098660 3300032126 Bacteria 2136
68 Ga0307415_100304321 3300032126 Bacteria 1322
69 Ga0316583_10000465 3300032133 Bacteria 12004
70 Ga0316583_10043416 3300032133 Bacteria 1588
71 Ga0316574_0002434 3300035398 Bacteria 9341
72 Ga0316574_0107656 3300035398 Bacteria 1786
73 Ga0316584_0006134 3300036712 Bacteria 8131
74 Ga0316584_0316274 3300036712 Bacteria 1127
75 Ga0395905_0281502 3300037471 Bacteria 1549
76 Ga0436364_0725276 3300037853 Bacteria 3608
77 Ga0400485_16353 3300038735 Bacteria 2651
78 Ga0400483_022530 3300039062 Bacteria 1918
79 Ga0400483_035645 3300039062 Bacteria 3956
80 Ga0400483_052561 3300039062 Bacteria 38169
81 Ga0400483_056518 3300039062 Bacteria 4236
82 Ga0400483_164649 3300039062 Bacteria 3859
83 Ga0400483_172037 3300039062 Bacteria 19502
84 Ga0400483_220748 3300039062 Bacteria 39057
85 Ga0400483_230901 3300039062 Bacteria 33494
86 Ga0436365_0393069 3300039437 Bacteria 3538
87 Ga0436365_1192930 3300039437 Bacteria 13903
88 Ga0439456_035329 3300042013 Bacteria 1077
89 Ga0439446_0027117 3300042156 Bacteria 1643
90 Ga0451577_0078931 3300042876 Bacteria 2934
91 Ga0466969_0014180 3300044656 Bacteria 4191
92 Ga0466972_0003369 3300044658 Bacteria 7919
93 Ga0466965_0001041 3300044683 Bacteria 10756
94 Ga0466965_0014870 3300044683 Bacteria 3689
95 Ga0466966_0038959 3300044684 Bacteria 3061
96 Ga0453684_0205859 3300044712 Bacteria 2290
97 Ga0453684_0540943 3300044712 Bacteria 1284
98 Ga0466968_0018453 3300044735 Bacteria 2798
99 Ga0466960_0060703 3300044901 Bacteria 1854
100 Ga0451576_0000658 3300045051 Bacteria 71384
101 Ga0451576_0036561 3300045051 Bacteria 5204
102 Ga0451576_0042554 3300045051 Bacteria 4795
103 Ga0451576_0151642 3300045051 Bacteria 2417
104 Ga0495629_0200191 3300046459 Bacteria 1381
105 Ga0495651_0002444 3300046462 Bacteria 14347
106 Ga0495583_0059652 3300046506 Bacteria 1709
107 Ga0495622_0081153 3300046557 Bacteria 1492
108 Ga0495670_0046628 3300046691 Bacteria 2165
109 Ga0495660_0085744 3300046810 Bacteria 1645
110 Ga0495680_0354260 3300047322 Bacteria 1021
111 Ga0495687_009461 3300047443 Bacteria 5443
112 Ga0496104_0062590 3300048907 Bacteria 3528
113 Ga0496105_0027459 3300048908 Bacteria 4651
114 Ga0496111_0069086 3300048914 Bacteria 2569
115 Ga0501031_0018828 3300049568 Bacteria 4495
116 Ga0501034_0122784 3300049571 Bacteria 2583
117 Ga0501036_0051544 3300049572 Bacteria 3484
118 Ga0501036_0213589 3300049572 Bacteria 1621
119 Ga0501038_0054864 3300049574 Bacteria 3426
120 Ga0501039_0027514 3300049575 Bacteria 4372
121 Ga0501040_0004636 3300049576 Bacteria 8920
122 Ga0501040_0220361 3300049576 Bacteria 1350
123 Ga0501041_0021698 3300049577 Bacteria 3845
124 Ga0501042_0001192 3300049578 Bacteria 15066
125 Ga0501043_0061101 3300049579 Bacteria 2959
126 Ga0501046_0007763 3300049580 Bacteria 9412
127 Ga0501047_0388019 3300049581 Bacteria 1230
128 Ga0501048_0012554 3300049582 Bacteria 6302
129 Ga0501068_0008710 3300049584 Bacteria 5657
130 Ga0501068_0260008 3300049584 Bacteria 1107
131 Ga0501069_0023409 3300049585 Bacteria 3368
132 Ga0501071_0011585 3300049587 Bacteria 5950
133 Ga0501072_0002077 3300049588 Bacteria 14897
134 Ga0501072_0009968 3300049588 Bacteria 7226
135 Ga0501072_0131138 3300049588 Bacteria 1998
136 Ga0501073_0068417 3300049589 Bacteria 2475
137 Ga0501074_0005941 3300049590 Bacteria 8801
138 Ga0501074_0147215 3300049590 Bacteria 1684
139 Ga0501075_0052161 3300049591 Bacteria 3075
140 Ga0501076_0021119 3300049592 Bacteria 4989
141 Ga0501076_0084220 3300049592 Bacteria 2554
142 Ga0501077_0001788 3300049593 Bacteria 12994
143 Ga0501079_0020410 3300049741 Bacteria 5064
144 Ga0501079_0411764 3300049741 Bacteria 1061
145 Ga0501080_0002483 3300049742 Bacteria 16151
146 Ga0501083_0024485 3300049744 Bacteria 4182
147 Ga0501035_0029557 3300049822 Bacteria 4999
148 Ga0501045_0037607 3300049824 Bacteria 3518
149 nmdc:mga00v17_2020_c1 3300050491 Bacteria 10455
150 nmdc:mga0yw44_95134_c1 3300050492 Bacteria 1889
151 nmdc:mga06z11_101217_c1 3300050494 Bacteria 1581
152 nmdc:mga06z11_166732_c1 3300050494 Bacteria 1262
153 nmdc:mga09592_20772_c1 3300050508 Bacteria 5404
154 nmdc:mga06r32_111633_c1 3300050510 Bacteria 2690
155 nmdc:mga0n895_52882_c1 3300050512 Bacteria 3989
156 nmdc:mga0rr50_113005_c1 3300050513 Bacteria 2152
157 nmdc:mga0rr50_386531_c1 3300050513 Bacteria 1181
158 nmdc:mga08x19_104479_c1 3300050514 Bacteria 1882
159 nmdc:mga0a205_18867_c1 3300050515 Bacteria 6495
160 Ga0500646_0000759 3300053090 Bacteria 9075
161 Ga0500654_111069 3300053099 Bacteria 1122
162 Ga0500561_0003473 3300053137 Bacteria 2762
163 Ga0500600_0031072 3300053149 Bacteria 3139
164 Ga0501084_0002427 3300054114 Bacteria 15002
165 Ga0501084_0143857 3300054114 Bacteria 2008
166 Ga0501082_0019770 3300060353 Bacteria 5808
167 Ga0501082_0112359 3300060353 Bacteria 2359
168 Ga0466962_0006155 3300061719 Bacteria 5767
169 Ga0530510_0010919 3300061734 Bacteria 6371
170 2884701141 2884693830 Bacteria 11273186
171 2791916200 2791354901 Bacteria 8322202
172 2873319000 2873314349 Bacteria 8512634
173 2895436167 2895427314 Bacteria 13147766
174 2895442970 2895442618 Bacteria 11027144
175 8003315936 8003314358 Bacteria 10575343
176 8003323370 8003314358 Bacteria 10575343
177 Ga0070709_10000218
178 Ga0070710_10000182
179 Ga0070711_100294121
180 Ga0070694_100000282
181 Ga0070708_100005173
182 Ga0070708_100041832
183 Ga0070706_100005325
184 Ga0070706_100068474
185 Ga0070707_100002466
186 Ga0070707_100032278
187 Ga0070707_100297818
188 Ga0070698_100002035
189 Ga0070698_100011273
190 Ga0070698_100067470
191 Ga0070698_100081862
192 Ga0070699_100003730
193 Ga0070699_100008419
194 Ga0070699_100019667
195 Ga0070699_100220805
196 Ga0070697_100026281
197 Ga0070704_100054449
198 Ga0068855_100055106
199 Ga0068863_100025997
200 Ga0068860_100222708
201 Ga0081455_10098785
202 Ga0081538_10004917
203 Ga0075365_10028488
204 Ga0075364_10003910
205 Ga0070712_100016028
206 Ga0075367_10111563
207 Ga0075367_10145603
208 Ga0075433_10015406
209 Ga0075433_10248539
210 Ga0075434_100025447
211 Ga0075435_100002318
212 Ga0114129_10080803
213 Ga0157378_10238633
214 Ga0163162_10723583
215 Ga0207653_10023361
216 Ga0207692_10000288
217 Ga0207684_10003256
218 Ga0207684_10004209
219 Ga0207684_10008507
220 Ga0207684_10053583
221 Ga0207693_10032276
222 Ga0207663_10130981
223 Ga0207646_10003963
224 Ga0207646_10115352
225 Ga0207650_10273963
226 Ga0207709_10063444
227 Ga0207670_10198291
228 Ga0207689_10069381
229 Ga0207678_10236676
230 Ga0207708_10069724
231 Ga0207641_10197406
232 Ga0207675_100022757
233 Ga0209588_1017094
234 Ga0268264_10214376
235 Ga0307517_10004091
236 Ga0265338_10089722
237 Ga0307508_10020066
238 Ga0307508_10069422
239 Ga0316576_10000196
240 Ga0316576_10064999
241 Ga0316578_10014185
242 Ga0307516_10105109
243 Ga0307415_100098660
244 Ga0307415_100304321
245 Ga0316583_10000465
246 Ga0316583_10043416
247 Ga0316574_0002434
248 Ga0316574_0107656
249 Ga0316584_0006134
250 Ga0316584_0316274
251 Ga0395905_0281502
252 Ga0436364_0725276
253 Ga0400485_16353
254 Ga0400483_022530
255 Ga0400483_035645
256 Ga0400483_052561
257 Ga0400483_056518
258 Ga0400483_164649
259 Ga0400483_172037
260 Ga0400483_220748
261 Ga0400483_230901
262 Ga0436365_0393069
263 Ga0436365_1192930
264 Ga0439456_035329
265 Ga0439446_0027117
266 Ga0451577_0078931
267 Ga0466969_0014180
268 Ga0466972_0003369
269 Ga0466965_0001041
270 Ga0466965_0014870
271 Ga0466966_0038959
272 Ga0453684_0205859
273 Ga0453684_0540943
274 Ga0466968_0018453
275 Ga0466960_0060703
276 Ga0451576_0000658
277 Ga0451576_0036561
278 Ga0451576_0042554
279 Ga0451576_0151642
280 Ga0495629_0200191
281 Ga0495651_0002444
282 Ga0495583_0059652
283 Ga0495622_0081153
284 Ga0495670_0046628
285 Ga0495660_0085744
286 Ga0495680_0354260
287 Ga0495687_009461
288 Ga0496104_0062590
289 Ga0496105_0027459
290 Ga0496111_0069086
291 Ga0501031_0018828
292 Ga0501034_0122784
293 Ga0501036_0051544
294 Ga0501036_0213589
295 Ga0501038_0054864
296 Ga0501039_0027514
297 Ga0501040_0004636
298 Ga0501040_0220361
299 Ga0501041_0021698
300 Ga0501042_0001192
301 Ga0501043_0061101
302 Ga0501046_0007763
303 Ga0501047_0388019
304 Ga0501048_0012554
305 Ga0501068_0008710
306 Ga0501068_0260008
307 Ga0501069_0023409
308 Ga0501071_0011585
309 Ga0501072_0002077
310 Ga0501072_0009968
311 Ga0501072_0131138
312 Ga0501073_0068417
313 Ga0501074_0005941
314 Ga0501074_0147215
315 Ga0501075_0052161
316 Ga0501076_0021119
317 Ga0501076_0084220
318 Ga0501077_0001788
319 Ga0501079_0020410
320 Ga0501079_0411764
321 Ga0501080_0002483
322 Ga0501083_0024485
323 Ga0501035_0029557
324 Ga0501045_0037607
325 nmdc:mga00v17_2020_c1
326 nmdc:mga0yw44_95134_c1
327 nmdc:mga06z11_101217_c1
328 nmdc:mga06z11_166732_c1
329 nmdc:mga09592_20772_c1
330 nmdc:mga06r32_111633_c1
331 nmdc:mga0n895_52882_c1
332 nmdc:mga0rr50_113005_c1
333 nmdc:mga0rr50_386531_c1
334 nmdc:mga08x19_104479_c1
335 nmdc:mga0a205_18867_c1
336 Ga0500646_0000759
337 Ga0500654_111069
338 Ga0500561_0003473
339 Ga0500600_0031072
340 Ga0501084_0002427
341 Ga0501084_0143857
342 Ga0501082_0019770
343 Ga0501082_0112359
344 Ga0466962_0006155
345 Ga0530510_0010919
346 2884701141
347 2791916200
348 2873319000
349 2895436167
350 2895442970
351 8003315936
352 8003323370

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

93

223

1

PF17863

AAA_lid_2

AAA lid domain

285

358

0.94

PF07728

AAA_5

AAA domain (dynein-related subfamily)

93

221

0.87

PF20030

bpMoxR

MoxR domain in the MoxR-vWA-beta-propeller ternary systems

61

258

0.79

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

94

229

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9272 3 314
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.8995 3 314
4upb-assembly1.cif.gz_C electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.839 3 282
4upb-assembly1.cif.gz_E electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.8371 3 310
3nbx-assembly1.cif.gz_X crystal structure of e. coli rava (regulatory atpase variant a) in complex with adp 0.8345 3 310
ID Description Score Start End Superfamily
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9878 203 309 1.10.8.80
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9827 206 310 1.10.8.80
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9698 203 309 1.10.8.80
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9663 205 310 1.10.8.80
af_Q79FN7_37_232_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9658 8 201 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A382P860-F1-model_v4 ATPase AAA-3 domain-containing protein 0.9954 8 122 GO:0005524
GO:0016887
AF-A0A7W1K3N1-F1-model_v4 AAA family ATPase 0.9942 8 133 GO:0005524
GO:0016887
AF-A0A4U3BBS4-F1-model_v4 deleted 0.9933 22 128
AF-A0A0A0IXF5-F1-model_v4 deleted 0.9901 5 164
AF-A0A7V2SBY5-F1-model_v4 AAA family ATPase 0.989 8 139 GO:0005524
GO:0016887

Map